Genome ID:GCA_000448685.2 PPRS_table
 

Probiotic potential risk score

ARGs (CARD) VFs (VFDB) PGs (PHI-base) PPRS
0223037.20

CARD

ARO accession ARO name Identity Coverage CARD name Accession no.
No hit found

Virulence Factor Database Search

Gene ID Gene name Identity Coverage e-value VF name VF category Accession no.
VFG006011STER_RS0532097.06100.000.0CapsuleImmune modulationWP_011681177
VFG006084STU_RS1624595.56100.000.0CapsuleImmune modulationWP_002948020
VFG005964STER_RS0530095.2499.850.0CapsuleImmune modulationWP_011681173
VFG006081rfbD95.07100.000.0CapsuleImmune modulationWP_014621820
VFG005556tig/ropA95.02100.000.0Trigger factorStress survivalWP_011680653
VFG018652plr/gapA94.95100.000.0Streptococcal plasmin receptor/GAPDHAdherenceWP_006154814
VFG005976STER_RS0530593.9499.870.0CapsuleImmune modulationWP_011681174
VFG006091STU_RS1626593.6399.760.0CapsuleImmune modulationWP_011226331
VFG006086STU_RS1625093.52100.000.0CapsuleImmune modulationWP_011226328
VFG006022rfbB93.41100.000.0CapsuleImmune modulationWP_002947383
VFG006074STU_RS1623092.66100.000.0CapsuleImmune modulationWP_011226325
VFG006082STU_RS1624092.37100.000.0CapsuleImmune modulationWP_011226326
VFG006053STU_RS1464592.08100.000.0CapsuleImmune modulationWP_011226048
VFG006088STU_RS1625591.99100.000.0CapsuleImmune modulationWP_041828290
VFG006041rfbA91.84100.000.0CapsuleImmune modulationWP_011681286
VFG006078STU_RS1623591.7799.050.0CapsuleImmune modulationWP_002948022
VFG005382srtA91.3599.870.0Sortase AExoenzymeWP_011681303
VFG005191fbp5491.0899.880.0FBPsAdherenceWP_011681101
VFG006046STR_RS0588090.91100.000.0CapsuleImmune modulationWP_011226149
VFG005323cbpD90.48100.000.0AutolysinExoenzymeWP_011225268
VFG005579eno90.34100.000.0Streptococcal enolaseExoenzymeWP_000022815
VFG006047STU_RS1464088.9299.710.0CapsuleImmune modulationWP_011226047

PHIB-BLAST

Protein ID Gene name Identity Coverage e-value Function Gene ID
Q54970spxB97.2999.830.0Pyruvate Oxidase GeneAAB40976
Q1JLQ2MntE95.5399.440.0Manganese HomeostasisABF32167
Q97S31metE93.1999.870.0Methionine biosynthesis enzymesAAK74738
P67331spr008492.5798.180.0pathogenitcity relatedAAK98888
Q1J943prsA291.8898.460.0Ribose-phosphate pyrophosphokinaseABF36968
Q04LP0PrtA91.23100.840.0serine proteaseABJ55268
Q99Z66ptsI89.9599.830.0Phosphoenolpyruvate-protein phosphotransferaseAAK34199
Q8DPC2potA89.8499.480.0ABC transporter ATP-binding protein - spermidine/putrescine transportAAL00050
Q8DYL6uvrB89.5999.850.0Excinuclease ABC, B subunitAE014259_2
D5AF41IMPDH87.6399.800.0Inosine-5'-monophosphate dehydrogenaseADE32434
P0C0B9bglB87.2099.330.0Putative phospho--glucosidaseAAK33487
Q97S30metF87.0698.960.0Methionine biosynthesis enzymesAAK74739
A4VWH9Eno86.4499.540.0EnolaseABP90468
A4VYE0gidA85.4298.750.0tRNA uridine 5-carboxymethylaminomethyl modification enzymeABP91129
P0A452recA85.1998.460.0DNA recombination and repairAAL00560
B5TQV9PGM84.7699.480.0phosphoglucomutaseACH87041
Q97RW0SP_067683.4493.500.0Transcription facotAAK74821
A4VY17pdh83.0999.410.0Pyruvate dehydrogenaseABP91006
A4VWD1mnmE82.6799.340.0Central tRNA-modifying GTPaseABP90420
Q93MY4covR85.5399.584.15e-151Responder proteinAAK71319
Q9S1K2rr0184.8299.122.35e-145Response regulatorCAB54566
P0A4H7CiaR87.4499.114.53e-144Two-component response regulatorAAK74935
B3VA60CovR81.6699.561.28e-137serves to repress GAS virulence factor-encoding genesACE75886
U2W9V3SpxA291.6799.251.72e-88Transcriptional regulatorERL21461
U2UML5SpxA182.8499.261.58e-82Transcriptional regulatorERL19273
Q8DQV4spr047985.4297.964.12e-58essential geneAAK99283
Q8DP67spr132792.9498.841.67e-54essential geneAAL00131
Q8CZ89spr017585.2398.883.93e-52pathogenitcity relatedAAK98979
Q8DRE1spr017783.1587.251.51e-50essential geneAAK98981
Q04M32ilvC (SPD_0406)97.3599.710.0Ketol-acid reductoisomerase (NADP(+))ABJ55451