Probiotic potential risk score
| ARGs (CARD) | VFs (VFDB) | PGs (PHI-base) | PPRS |
|---|---|---|---|
| 5 | 9 | 9 | 13.67 |
CARD
| ARO accession | ARO name | Identity | Coverage | CARD name | Accession no. |
|---|---|---|---|---|---|
| ARO:3003250 | bcrC | 100.00 | 100.00 | bcrC | L20573.1 |
| ARO:3002987 | bcrA | 100.00 | 96.08 | bcrA | L20573.1 |
| ARO:3002814 | clbA | 99.71 | 100.00 | clbA | CP006845.1 |
| ARO:3000495 | ErmD | 99.65 | 102.44 | ErmD | L08389.1 |
| ARO:3002988 | bcrB | 99.52 | 109.62 | bcrB | L20573.1 |
Virulence Factor Database Search
| Gene ID | Gene name | Identity | Coverage | e-value | VF name | VF category | Accession no. |
|---|---|---|---|---|---|---|---|
| VFG016296 | capC | 98.67 | 100.00 | 0.0 | Capsule | Immune modulation | WP_003185831 |
| VFG016292 | capA | 96.84 | 100.00 | 0.0 | Capsule | Immune modulation | WP_003185829 |
| VFG016304 | dep/capD | 94.99 | 100.00 | 0.0 | Capsule | Immune modulation | WP_011197813 |
| VFG049997 | dhbA | 94.42 | 100.00 | 0.0 | Bacillibactin | Nutritional/Metabolic factor | WP_003185961 |
| VFG050008 | dhbC | 94.37 | 99.75 | 0.0 | Bacillibactin | Nutritional/Metabolic factor | WP_003185958 |
| VFG050030 | dhbB | 94.28 | 100.00 | 0.0 | Bacillibactin | Nutritional/Metabolic factor | WP_003185954 |
| VFG050041 | dhbF | 93.38 | 99.96 | 0.0 | Bacillibactin | Nutritional/Metabolic factor | WP_011198384 |
| VFG050019 | dhbE | 92.89 | 99.69 | 0.0 | Bacillibactin | Nutritional/Metabolic factor | WP_003185956 |
| VFG016299 | capB | 82.21 | 99.66 | 0.0 | Capsule | Immune modulation | NP_391471 |
PHIB-BLAST
| Protein ID | Gene name | Identity | Coverage | e-value | Function | Gene ID |
|---|---|---|---|---|---|---|
| W8TRT9 | tufA | 86.80 | 99.24 | 0.0 | Elongation factor Tu | AHM69299 |
| B3GXB6 | pdxS | 84.83 | 97.97 | 0.0 | Encodes the putative pyridoxal 5-phosphate synthase subunit PdxS | ACE61268 |
| P99075 | FbaA | 80.70 | 99.30 | 4.09e-172 | Fructose-bisphosphate aldolase | BAB43211 |
| B7HLG1 | CodY | 82.24 | 99.62 | 2.04e-150 | Nutrient-responsive regulator | ACJ80679 |
| Q9RGX0 | spxA1 | 86.26 | 99.24 | 6.05e-85 | Redox-responsive transcription factor | AAF21893 |
| P0A355 | CspA | 90.91 | 98.51 | 1.33e-39 | Cold shock protein | CAA62903 |
| Q92AD0 | CspD | 81.54 | 97.01 | 3.37e-36 | Cold shock protein | CAC99957 |
| P0A357 | CspB | 84.61 | 97.01 | 1.63e-34 | Cold shock protein | CAD00094 |
| Q2FIE9 | lipA (SAUSA300_0829) | 80.22 | 87.58 | 8.35e-171 | Lipoic acid synthetase | ABD22039 |