Probiotic potential risk score
| ARGs (CARD) | VFs (VFDB) | PGs (PHI-base) | PPRS |
|---|---|---|---|
| 7 | 4 | 7 | 10.68 |
CARD
| ARO accession | ARO name | Identity | Coverage | CARD name | Accession no. |
|---|---|---|---|---|---|
| ARO:3003063 | ykkC | 100.00 | 100.00 | ykkC | AL009126.1 |
| ARO:3004476 | vmlR | 100.00 | 100.00 | vmlR | NC_000964.3 |
| ARO:3003006 | blt | 99.75 | 100.00 | blt | L32599.1 |
| ARO:3002813 | lmrB | 99.16 | 100.42 | lmrB | JYFL01000006.1 |
| ARO:3004541 | mphK | 98.69 | 100.00 | mphK | CP010314.1 |
| ARO:3002627 | aadK | 98.24 | 100.00 | aadK | AL009126.1 |
| ARO:3003064 | ykkD | 98.10 | 100.00 | ykkD | AL009126.1 |
Virulence Factor Database Search
| Gene ID | Gene name | Identity | Coverage | e-value | VF name | VF category | Accession no. |
|---|---|---|---|---|---|---|---|
| VFG016299 | capB | 99.75 | 100.00 | 0.0 | Capsule | Immune modulation | NP_391471 |
| VFG016295 | capC | 99.56 | 100.00 | 0.0 | Capsule | Immune modulation | NP_391470 |
| VFG016303 | dep/capD | 99.26 | 100.00 | 0.0 | Capsule | Immune modulation | NP_389723 |
| VFG016291 | capA | 99.12 | 100.00 | 0.0 | Capsule | Immune modulation | NP_391469 |
PHIB-BLAST
| Protein ID | Gene name | Identity | Coverage | e-value | Function | Gene ID |
|---|---|---|---|---|---|---|
| W8TRT9 | tufA | 85.03 | 99.24 | 0.0 | Elongation factor Tu | AHM69299 |
| B3GXB6 | pdxS | 83.79 | 97.97 | 0.0 | Encodes the putative pyridoxal 5-phosphate synthase subunit PdxS | ACE61268 |
| B7HLG1 | CodY | 81.08 | 99.62 | 3.84e-148 | Nutrient-responsive regulator | ACJ80679 |
| Q9RGX0 | spxA1 | 83.97 | 99.24 | 6.21e-83 | Redox-responsive transcription factor | AAF21893 |
| Q724L7 | SpoVG | 82.72 | 78.64 | 1.60e-47 | RNA-Binding Protein | AAT02994 |
| P0A355 | CspA | 90.91 | 98.51 | 5.27e-40 | Cold shock protein | CAA62903 |
| P0A357 | CspB | 83.08 | 97.01 | 2.02e-34 | Cold shock protein | CAD00094 |