Genome ID:GCA_002925865.1 PPRS_table
 

Probiotic potential risk score

ARGs (CARD) VFs (VFDB) PGs (PHI-base) PPRS
0212835.00

CARD

ARO accession ARO name Identity Coverage CARD name Accession no.
No hit found

Virulence Factor Database Search

Gene ID Gene name Identity Coverage e-value VF name VF category Accession no.
VFG005556tig/ropA94.63100.000.0Trigger factorStress survivalWP_011680653
VFG006081rfbD94.37100.000.0CapsuleImmune modulationWP_014621820
VFG005359plr/gapA93.87100.100.0Streptococcal plasmin receptor/GAPDHAdherenceWP_002899102
VFG006058STU_RS1465093.84100.140.0CapsuleImmune modulationWP_011226049
VFG006084STU_RS1624593.7199.880.0CapsuleImmune modulationWP_002948020
VFG006022rfbB93.70100.000.0CapsuleImmune modulationWP_002947383
VFG006031STU_RS1463093.13100.000.0CapsuleImmune modulationWP_011226045
VFG006074STU_RS1623092.4398.430.0CapsuleImmune modulationWP_011226325
VFG006082STU_RS1624092.37100.000.0CapsuleImmune modulationWP_011226326
VFG006046STR_RS0588092.09100.000.0CapsuleImmune modulationWP_011226149
VFG006088STU_RS1625592.0099.910.0CapsuleImmune modulationWP_041828290
VFG006086STU_RS1625091.95100.000.0CapsuleImmune modulationWP_011226328
VFG006053STU_RS1464591.94100.000.0CapsuleImmune modulationWP_011226048
VFG006070rfbA91.49100.000.0CapsuleImmune modulationWP_011226150
VFG006078STU_RS1623591.4899.340.0CapsuleImmune modulationWP_002948022
VFG005191fbp5490.9699.940.0FBPsAdherenceWP_011681101
VFG005976STER_RS0530590.8499.870.0CapsuleImmune modulationWP_011681174
VFG005579eno90.42100.000.0Streptococcal enolaseExoenzymeWP_000022815
VFG005323cbpD90.4290.710.0AutolysinExoenzymeWP_011225268
VFG006047STU_RS1464085.4599.860.0CapsuleImmune modulationWP_011226047
VFG005382srtA84.5699.740.0Sortase AExoenzymeWP_011681303

PHIB-BLAST

Protein ID Gene name Identity Coverage e-value Function Gene ID
Q1JLQ2MntE96.0999.440.0Manganese HomeostasisABF32167
Q97S31metE93.0699.870.0Methionine biosynthesis enzymesAAK74738
P67331spr008492.5798.180.0pathogenitcity relatedAAK98888
Q1J943prsA292.1998.460.0Ribose-phosphate pyrophosphokinaseABF36968
Q99Z66ptsI89.9599.830.0Phosphoenolpyruvate-protein phosphotransferaseAAK34199
Q8DPC2potA89.8499.480.0ABC transporter ATP-binding protein - spermidine/putrescine transportAAL00050
Q8DYL6uvrB89.4499.850.0Excinuclease ABC, B subunitAE014259_2
Q97S30metF88.1198.960.0Methionine biosynthesis enzymesAAK74739
P0C0B9bglB87.8899.330.0Putative phospho--glucosidaseAAK33487
D5AF41IMPDH87.8399.800.0Inosine-5'-monophosphate dehydrogenaseADE32434
A4VWH9Eno86.4499.540.0EnolaseABP90468
A4VYE0gidA85.5898.750.0tRNA uridine 5-carboxymethylaminomethyl modification enzymeABP91129
P0A452recA85.1998.460.0DNA recombination and repairAAL00560
B5TQV9PGM84.7699.480.0phosphoglucomutaseACH87041
Q97RW0SP_067683.4493.500.0Transcription facotAAK74821
A4VWD1mnmE82.6799.340.0Central tRNA-modifying GTPaseABP90420
A4VY17pdh82.4999.410.0Pyruvate dehydrogenaseABP91006
Q93MY4covR85.5399.584.26e-151Responder proteinAAK71319
Q9S1K2rr0184.8299.122.05e-145Response regulatorCAB54566
R4Z8M6ciaR86.1698.689.31e-144Two component system response regulatorAIK75708
B3VA60CovR81.6699.561.32e-137serves to repress GAS virulence factor-encoding genesACE75886
U2W9V3SpxA291.6799.251.76e-88Transcriptional regulatorERL21461
U2UML5SpxA182.8499.261.62e-82Transcriptional regulatorERL19273
Q8DQV4spr047985.4297.966.64e-58essential geneAAK99283
Q8DP67spr132792.9498.841.71e-54essential geneAAL00131
Q8CZ89spr017585.2398.884.04e-52pathogenitcity relatedAAK98979
Q8DRE1spr017783.1587.251.55e-50essential geneAAK98981
Q04M32ilvC (SPD_0406)97.3599.710.0Ketol-acid reductoisomerase (NADP(+))ABJ55451