Genome ID:GCA_009716955.1 PPRS_table
 

Probiotic potential risk score

ARGs (CARD) VFs (VFDB) PGs (PHI-base) PPRS
0202834.41

CARD

ARO accession ARO name Identity Coverage CARD name Accession no.
No hit found

Virulence Factor Database Search

Gene ID Gene name Identity Coverage e-value VF name VF category Accession no.
VFG005556tig/ropA94.78100.000.0Trigger factorStress survivalWP_011680653
VFG006089rfbD94.60100.000.0CapsuleImmune modulationWP_011681446
VFG006020STR_RS0526094.40100.000.0CapsuleImmune modulationWP_011227248
VFG006022rfbB93.79100.000.0CapsuleImmune modulationWP_002947383
VFG006084STU_RS1624592.8599.880.0CapsuleImmune modulationWP_002948020
VFG006074STU_RS1623092.6098.430.0CapsuleImmune modulationWP_011226325
VFG006082STU_RS1624092.37100.000.0CapsuleImmune modulationWP_011226326
VFG006086STU_RS1625091.85100.000.0CapsuleImmune modulationWP_011226328
VFG006088STU_RS1625591.5799.830.0CapsuleImmune modulationWP_041828290
VFG005191fbp5491.3999.940.0FBPsAdherenceWP_011681101
VFG006011STER_RS0532091.1399.860.0CapsuleImmune modulationWP_011681177
VFG006046STR_RS0588091.08100.000.0CapsuleImmune modulationWP_011226149
VFG006078STU_RS1623591.0099.150.0CapsuleImmune modulationWP_002948022
VFG006052rfbA90.92100.000.0CapsuleImmune modulationWP_011226150
VFG005579eno90.34100.000.0Streptococcal enolaseExoenzymeWP_000022815
VFG018652plr/gapA90.16100.000.0Streptococcal plasmin receptor/GAPDHAdherenceWP_006154814
VFG005324cbpD89.9693.500.0AutolysinExoenzymeWP_082302295
VFG006047STU_RS1464089.90100.000.0CapsuleImmune modulationWP_011226047
VFG005382srtA84.6799.870.0Sortase AExoenzymeWP_011681303
VFG006040STU_RS1463581.1390.283.67e-153CapsuleImmune modulationWP_011226046

PHIB-BLAST

Protein ID Gene name Identity Coverage e-value Function Gene ID
Q1JLQ2MntE96.0999.440.0Manganese HomeostasisABF32167
Q97S31metE92.6699.870.0Methionine biosynthesis enzymesAAK74738
P67331spr008492.5798.180.0pathogenitcity relatedAAK98888
Q1J943prsA292.1998.460.0Ribose-phosphate pyrophosphokinaseABF36968
Q99Z66ptsI90.1299.830.0Phosphoenolpyruvate-protein phosphotransferaseAAK34199
Q8DPC2potA89.5899.480.0ABC transporter ATP-binding protein - spermidine/putrescine transportAAL00050
Q8DYL6uvrB89.4499.850.0Excinuclease ABC, B subunitAE014259_2
D5AF41IMPDH87.6399.800.0Inosine-5'-monophosphate dehydrogenaseADE32434
P0C0B9bglB87.2099.330.0Putative phospho--glucosidaseAAK33487
Q97S30metF87.0698.960.0Methionine biosynthesis enzymesAAK74739
A4VWH9Eno86.4499.540.0EnolaseABP90468
A4VYE0gidA85.5898.750.0tRNA uridine 5-carboxymethylaminomethyl modification enzymeABP91129
P0A452recA85.1998.460.0DNA recombination and repairAAL00560
B5TQV9PGM84.7699.480.0phosphoglucomutaseACH87041
Q97RW0SP_067683.4493.500.0Transcription facotAAK74821
A4VY17pdh83.3899.410.0Pyruvate dehydrogenaseABP91006
A4VWD1mnmE82.6799.340.0Central tRNA-modifying GTPaseABP90420
Q93MY4covR85.5399.584.13e-151Responder proteinAAK71319
Q9S1K2rr0184.8299.121.98e-145Response regulatorCAB54566
R4Z8M6ciaR86.1698.689.02e-144Two component system response regulatorAIK75708
B3VA60CovR81.6699.561.28e-137serves to repress GAS virulence factor-encoding genesACE75886
U2W9V3SpxA291.6799.251.71e-88Transcriptional regulatorERL21461
U2UML5SpxA182.0999.267.07e-82Transcriptional regulatorERL19273
Q8DQV4spr047985.4297.966.43e-58essential geneAAK99283
Q8DP67spr132790.5998.841.80e-53essential geneAAL00131
Q8CZ89spr017585.2398.883.91e-52pathogenitcity relatedAAK98979
Q8DRE1spr017783.1587.251.50e-50essential geneAAK98981
Q04M32ilvC (SPD_0406)85.8899.710.0Ketol-acid reductoisomerase (NADP(+))ABJ55451