Genome ID:GCA_009738225.1 PPRS_table
 

Probiotic potential risk score

ARGs (CARD) VFs (VFDB) PGs (PHI-base) PPRS
2162933.18

CARD

ARO accession ARO name Identity Coverage CARD name Accession no.
ARO:3002837lnuC98.17100.00lnuCAY928180.1
ARO:3002687catQ94.06100.00catQM55620.1

Virulence Factor Database Search

Gene ID Gene name Identity Coverage e-value VF name VF category Accession no.
VFG006058STU_RS1465097.19100.210.0CapsuleImmune modulationWP_011226049
VFG005964STER_RS0530095.3999.850.0CapsuleImmune modulationWP_011681173
VFG005976STER_RS0530594.60100.000.0CapsuleImmune modulationWP_011681174
VFG005556tig/ropA94.55100.000.0Trigger factorStress survivalWP_011680653
VFG006089rfbD94.25100.000.0CapsuleImmune modulationWP_011681446
VFG019077plr/gapA93.97100.000.0Streptococcal plasmin receptor/GAPDHAdherenceWP_000260685
VFG006022rfbB93.89100.000.0CapsuleImmune modulationWP_002947383
VFG006000STER_RS0531593.72100.000.0CapsuleImmune modulationWP_011681176
VFG006046STR_RS0588091.92100.000.0CapsuleImmune modulationWP_011226149
VFG006041rfbA91.03100.000.0CapsuleImmune modulationWP_011681286
VFG005191fbp5490.4299.940.0FBPsAdherenceWP_011681101
VFG005579eno90.19100.000.0Streptococcal enolaseExoenzymeWP_000022815
VFG006047STU_RS1464088.4799.860.0CapsuleImmune modulationWP_011226047
VFG005324cbpD88.1993.500.0AutolysinExoenzymeWP_082302295
VFG005382srtA84.2999.740.0Sortase AExoenzymeWP_011681303
VFG006004SPD_RS0177584.1096.201.58e-161CapsuleImmune modulationWP_001819836

PHIB-BLAST

Protein ID Gene name Identity Coverage e-value Function Gene ID
Q1JLQ2MntE95.5399.440.0Manganese HomeostasisABF32167
P67331spr008492.8898.180.0pathogenitcity relatedAAK98888
Q97S31metE92.2699.870.0Methionine biosynthesis enzymesAAK74738
Q1J943prsA292.1998.460.0Ribose-phosphate pyrophosphokinaseABF36968
Q99Z66ptsI89.9599.830.0Phosphoenolpyruvate-protein phosphotransferaseAAK34199
Q8DYL6uvrB89.5999.850.0Excinuclease ABC, B subunitAE014259_2
Q8DPC2potA89.5899.480.0ABC transporter ATP-binding protein - spermidine/putrescine transportAAL00050
Q97S30metF88.1198.960.0Methionine biosynthesis enzymesAAK74739
P0C0B9bglB87.8899.330.0Putative phospho--glucosidaseAAK33487
D5AF41IMPDH87.6399.800.0Inosine-5'-monophosphate dehydrogenaseADE32434
A4VWH9Eno86.4499.540.0EnolaseABP90468
A4VYE0gidA85.5898.750.0tRNA uridine 5-carboxymethylaminomethyl modification enzymeABP91129
P0A452recA85.1998.460.0DNA recombination and repairAAL00560
B5TQV9PGM84.7699.480.0phosphoglucomutaseACH87041
Q97RW0SP_067683.4493.500.0Transcription facotAAK74821
A4VY17pdh83.0999.410.0Pyruvate dehydrogenaseABP91006
A4VWD1mnmE82.0299.340.0Central tRNA-modifying GTPaseABP90420
A0A0H2URH5pnuC86.2697.042.04e-170NAD salvage pathway importerAAK75931
Q93MY4covR85.5399.584.77e-151Responder proteinAAK71319
Q9S1K2rr0183.9399.128.92e-144Response regulatorCAB54566
P0A4H7CiaR87.0099.115.56e-143Two-component response regulatorAAK74935
B3VA60CovR81.6699.561.47e-137serves to repress GAS virulence factor-encoding genesACE75886
U2W9V3SpxA291.6799.251.97e-88Transcriptional regulatorERL21461
U2UML5SpxA182.8499.261.82e-82Transcriptional regulatorERL19273
Q8DQV4spr047985.4297.967.43e-58essential geneAAK99283
Q8DP67spr132792.9498.841.92e-54essential geneAAL00131
Q8CZ89spr017585.2398.884.52e-52pathogenitcity relatedAAK98979
Q8DRE1spr017783.1587.251.74e-50essential geneAAK98981
Q04M32ilvC (SPD_0406)97.6599.710.0Ketol-acid reductoisomerase (NADP(+))ABJ55451