Genome ID:GCA_009738245.1 PPRS_table
 

Probiotic potential risk score

ARGs (CARD) VFs (VFDB) PGs (PHI-base) PPRS
1203036.07

CARD

ARO accession ARO name Identity Coverage CARD name Accession no.
ARO:3000375ErmB99.1898.79ErmBAF242872.1

Virulence Factor Database Search

Gene ID Gene name Identity Coverage e-value VF name VF category Accession no.
VFG006000STER_RS0531594.81100.000.0CapsuleImmune modulationWP_011681176
VFG005556tig/ropA94.78100.000.0Trigger factorStress survivalWP_011680653
VFG006081rfbD94.13100.000.0CapsuleImmune modulationWP_014621820
VFG006022rfbB93.79100.000.0CapsuleImmune modulationWP_002947383
VFG018652plr/gapA93.08100.000.0Streptococcal plasmin receptor/GAPDHAdherenceWP_006154814
VFG006084STU_RS1624592.8599.880.0CapsuleImmune modulationWP_002948020
VFG006074STU_RS1623092.6098.430.0CapsuleImmune modulationWP_011226325
VFG006082STU_RS1624092.37100.000.0CapsuleImmune modulationWP_011226326
VFG006086STU_RS1625091.85100.000.0CapsuleImmune modulationWP_011226328
VFG006088STU_RS1625591.5799.830.0CapsuleImmune modulationWP_041828290
VFG005191fbp5491.3399.940.0FBPsAdherenceWP_011681101
VFG006046STR_RS0588091.08100.000.0CapsuleImmune modulationWP_011226149
VFG006078STU_RS1623591.0099.150.0CapsuleImmune modulationWP_002948022
VFG006052rfbA90.92100.000.0CapsuleImmune modulationWP_011226150
VFG006011STER_RS0532090.9299.860.0CapsuleImmune modulationWP_011681177
VFG005579eno90.50100.000.0Streptococcal enolaseExoenzymeWP_000022815
VFG005324cbpD89.9693.500.0AutolysinExoenzymeWP_082302295
VFG006047STU_RS1464089.90100.000.0CapsuleImmune modulationWP_011226047
VFG005382srtA84.1499.870.0Sortase AExoenzymeWP_011681303
VFG006040STU_RS1463580.9890.281.78e-151CapsuleImmune modulationWP_011226046

PHIB-BLAST

Protein ID Gene name Identity Coverage e-value Function Gene ID
Q1JLQ2MntE96.0999.440.0Manganese HomeostasisABF32167
P67331spr008493.1998.180.0pathogenitcity relatedAAK98888
Q97S31metE92.9299.870.0Methionine biosynthesis enzymesAAK74738
Q1J943prsA292.1998.460.0Ribose-phosphate pyrophosphokinaseABF36968
Q04LP0PrtA91.42100.840.0serine proteaseABJ55268
Q99Z66ptsI89.9599.830.0Phosphoenolpyruvate-protein phosphotransferaseAAK34199
Q8DPC2potA89.8499.480.0ABC transporter ATP-binding protein - spermidine/putrescine transportAAL00050
Q8DYL6uvrB89.7499.850.0Excinuclease ABC, B subunitAE014259_2
D5AF41IMPDH87.8399.800.0Inosine-5'-monophosphate dehydrogenaseADE32434
Q97S30metF87.7698.960.0Methionine biosynthesis enzymesAAK74739
P0C0B9bglB87.2099.330.0Putative phospho--glucosidaseAAK33487
A4VWH9Eno86.4499.540.0EnolaseABP90468
A4VYE0gidA85.7498.750.0tRNA uridine 5-carboxymethylaminomethyl modification enzymeABP91129
P0A452recA85.1998.460.0DNA recombination and repairAAL00560
B5TQV9PGM84.7699.480.0phosphoglucomutaseACH87041
Q97RW0SP_067683.4493.500.0Transcription facotAAK74821
A4VY17pdh83.3899.410.0Pyruvate dehydrogenaseABP91006
A4VWD1mnmE82.8999.340.0Central tRNA-modifying GTPaseABP90420
Q7WYI8mtsA80.4992.567.72e-173Substrate-binding lipoprotein of manganese transporterAIK76191
Q93MY4covR85.5399.589.05e-151Responder proteinAAK71319
Q9S1K2rr0184.8299.122.06e-145Response regulatorCAB54566
P0A4H7CiaR87.0099.115.00e-143Two-component response regulatorAAK74935
B3VA60CovR82.1099.564.48e-138serves to repress GAS virulence factor-encoding genesACE75886
U2W9V3SpxA291.6799.251.77e-88Transcriptional regulatorERL21461
U2UML5SpxA182.0999.267.35e-82Transcriptional regulatorERL19273
Q8DQV4spr047985.4297.966.69e-58essential geneAAK99283
Q8DP67spr132790.5998.841.87e-53essential geneAAL00131
Q8CZ89spr017585.2398.884.07e-52pathogenitcity relatedAAK98979
Q8DRE1spr017783.1587.251.56e-50essential geneAAK98981
Q04M32ilvC (SPD_0406)85.8899.710.0Ketol-acid reductoisomerase (NADP(+))ABJ55451