Genome ID:GCA_013307265.1 PPRS_table
 

Probiotic potential risk score

ARGs (CARD) VFs (VFDB) PGs (PHI-base) PPRS
0252938.29

CARD

ARO accession ARO name Identity Coverage CARD name Accession no.
No hit found

Virulence Factor Database Search

Gene ID Gene name Identity Coverage e-value VF name VF category Accession no.
VFG005322cbpD100.00100.000.0AutolysinExoenzymeWP_011226733
VFG006046STR_RS05880100.00100.000.0CapsuleImmune modulationWP_011226149
VFG005555tig/ropA99.92100.000.0Trigger factorStress survivalWP_011225339
VFG006086STU_RS1625099.79100.000.0CapsuleImmune modulationWP_011226328
VFG006052rfbA99.77100.000.0CapsuleImmune modulationWP_011226150
VFG006022rfbB99.71100.000.0CapsuleImmune modulationWP_002947383
VFG005191fbp5499.70100.000.0FBPsAdherenceWP_011681101
VFG006074STU_RS1623099.66100.000.0CapsuleImmune modulationWP_011226325
VFG006088STU_RS1625599.65100.000.0CapsuleImmune modulationWP_041828290
VFG006084STU_RS1624599.63100.000.0CapsuleImmune modulationWP_002948020
VFG006078STU_RS1623599.53100.000.0CapsuleImmune modulationWP_002948022
VFG006082STU_RS1624099.50100.000.0CapsuleImmune modulationWP_011226326
VFG006081rfbD99.41100.000.0CapsuleImmune modulationWP_014621820
VFG006090STU_RS1626099.11100.000.0CapsuleImmune modulationWP_011226330
VFG005381srtA98.95100.000.0Sortase AExoenzyme-
VFG006053STU_RS1464598.91100.000.0CapsuleImmune modulationWP_011226048
VFG005976STER_RS0530598.38100.000.0CapsuleImmune modulationWP_011681174
VFG006091STU_RS1626598.20100.000.0CapsuleImmune modulationWP_011226331
VFG006058STU_RS1465098.14100.000.0CapsuleImmune modulationWP_011226049
VFG006030STR_RS0526598.01100.000.0CapsuleImmune modulationWP_041827043
VFG006009STR_RS0525596.97100.000.0CapsuleImmune modulationWP_011227247
VFG005365SAG_RS0910596.94100.000.0Agglutinin receptorAdherenceWP_000167699
VFG019077plr/gapA93.48100.100.0Streptococcal plasmin receptor/GAPDHAdherenceWP_000260685
VFG005580eno90.2899.920.0Streptococcal enolaseExoenzymeWP_000022813
VFG006004SPD_RS0177583.0896.201.18e-151CapsuleImmune modulationWP_001819836
VFG006020STR_RS0526098.7163.520.0CapsuleImmune modulationWP_011227248

PHIB-BLAST

Protein ID Gene name Identity Coverage e-value Function Gene ID
Q1JLQ2MntE94.4199.440.0Manganese HomeostasisABF32167
P67331spr008492.8898.180.0pathogenitcity relatedAAK98888
Q97S31metE91.9999.870.0Methionine biosynthesis enzymesAAK74738
Q1J943prsA290.6298.460.0Ribose-phosphate pyrophosphokinaseABF36968
Q8DPC2potA89.5899.480.0ABC transporter ATP-binding protein - spermidine/putrescine transportAAL00050
Q8DYL6uvrB88.9999.850.0Excinuclease ABC, B subunitAE014259_2
P0C0B9bglB88.8999.330.0Putative phospho--glucosidaseAAK33487
Q99Z66ptsI87.6999.830.0Phosphoenolpyruvate-protein phosphotransferaseAAK34199
D5AF41IMPDH87.6399.800.0Inosine-5'-monophosphate dehydrogenaseADE32434
A4VWH9Eno86.2199.540.0EnolaseABP90468
A4VYE0gidA86.0598.750.0tRNA uridine 5-carboxymethylaminomethyl modification enzymeABP91129
Q97S30metF86.0198.960.0Methionine biosynthesis enzymesAAK74739
P0A452recA84.9498.460.0DNA recombination and repairAAL00560
B5TQV9PGM83.8999.480.0phosphoglucomutaseACH87041
A4VY17pdh83.0999.410.0Pyruvate dehydrogenaseABP91006
Q97RW0SP_067683.0693.190.0Transcription facotAAK74821
A4VWD1mnmE82.2499.340.0Central tRNA-modifying GTPaseABP90420
Q1JJJ3PepO80.0399.840.0EndopeptidaseABF32980
Q93MY4covR85.1199.585.69e-151Responder proteinAAK71319
Q9S1K2rr0184.3899.122.27e-144Response regulatorCAB54566
B3VA60CovR80.7999.564.13e-136serves to repress GAS virulence factor-encoding genesACE75886
P0A4H7CiaR84.2176.001.84e-105Two-component response regulatorAAK74935
U2W9V3SpxA290.9199.253.23e-88Transcriptional regulatorERL21461
U2UML5SpxA180.6099.265.17e-79Transcriptional regulatorERL19273
Q8DQV4spr047986.4697.961.09e-58essential geneAAK99283
Q8DP67spr132795.2998.843.99e-55essential geneAAL00131
Q8DRE1spr017781.0097.064.58e-55essential geneAAK98981
Q8CZ89spr017584.0998.884.11e-51pathogenitcity relatedAAK98979
Q04M32ilvC (SPD_0406)96.4799.710.0Ketol-acid reductoisomerase (NADP(+))ABJ55451