Genome ID:GCA_013370965.1 PPRS_table
 

Probiotic potential risk score

ARGs (CARD) VFs (VFDB) PGs (PHI-base) PPRS
0272738.18

CARD

ARO accession ARO name Identity Coverage CARD name Accession no.
No hit found

Virulence Factor Database Search

Gene ID Gene name Identity Coverage e-value VF name VF category Accession no.
VFG005322cbpD100.00100.000.0AutolysinExoenzymeWP_011226733
VFG006046STR_RS05880100.00100.000.0CapsuleImmune modulationWP_011226149
VFG006074STU_RS1623099.94100.000.0CapsuleImmune modulationWP_011226325
VFG005555tig/ropA99.92100.000.0Trigger factorStress survivalWP_011225339
VFG006052rfbA99.89100.000.0CapsuleImmune modulationWP_011226150
VFG005191fbp5499.88100.000.0FBPsAdherenceWP_011681101
VFG006022rfbB99.81100.000.0CapsuleImmune modulationWP_002947383
VFG006086STU_RS1625099.79100.000.0CapsuleImmune modulationWP_011226328
VFG006084STU_RS1624599.75100.000.0CapsuleImmune modulationWP_002948020
VFG006082STU_RS1624099.58100.000.0CapsuleImmune modulationWP_011226326
VFG006079STER_RS0708599.5798.330.0CapsuleImmune modulationWP_011681442
VFG006088STU_RS1625599.56100.000.0CapsuleImmune modulationWP_041828290
VFG006078STU_RS1623599.53100.000.0CapsuleImmune modulationWP_002948022
VFG006081rfbD99.41100.000.0CapsuleImmune modulationWP_014621820
VFG006000STER_RS0531598.91100.000.0CapsuleImmune modulationWP_011681176
VFG005976STER_RS0530598.38100.000.0CapsuleImmune modulationWP_011681174
VFG005844STER_RS0525098.23100.000.0CapsuleImmune modulationWP_011681165
VFG006047STU_RS1464097.83100.000.0CapsuleImmune modulationWP_011226047
VFG006091STU_RS1626597.33100.000.0CapsuleImmune modulationWP_011226331
VFG005365SAG_RS0910596.92100.000.0Agglutinin receptorAdherenceWP_000167699
VFG006031STU_RS1463095.69100.000.0CapsuleImmune modulationWP_011226045
VFG005964STER_RS0530095.2399.710.0CapsuleImmune modulationWP_011681173
VFG006075STER_RS0707593.7899.100.0CapsuleImmune modulationWP_011681440
VFG006040STU_RS1463592.44100.000.0CapsuleImmune modulationWP_011226046
VFG005580eno90.2899.920.0Streptococcal enolaseExoenzymeWP_000022813
VFG005988STER_RS0531089.90100.000.0CapsuleImmune modulationWP_011681175
VFG006004SPD_RS0177583.5996.201.04e-156CapsuleImmune modulationWP_001819836

PHIB-BLAST

Protein ID Gene name Identity Coverage e-value Function Gene ID
Q1JLQ2MntE94.4199.440.0Manganese HomeostasisABF32167
Q97S31metE91.9999.870.0Methionine biosynthesis enzymesAAK74738
Q1J943prsA290.6298.460.0Ribose-phosphate pyrophosphokinaseABF36968
Q8DPC2potA89.5899.480.0ABC transporter ATP-binding protein - spermidine/putrescine transportAAL00050
Q8DYL6uvrB88.9999.850.0Excinuclease ABC, B subunitAE014259_2
P0C0B9bglB88.5599.330.0Putative phospho--glucosidaseAAK33487
Q99Z66ptsI87.6999.830.0Phosphoenolpyruvate-protein phosphotransferaseAAK34199
D5AF41IMPDH87.6399.800.0Inosine-5'-monophosphate dehydrogenaseADE32434
Q97S30metF86.3698.960.0Methionine biosynthesis enzymesAAK74739
A4VWH9Eno86.2199.540.0EnolaseABP90468
A4VYE0gidA86.0598.750.0tRNA uridine 5-carboxymethylaminomethyl modification enzymeABP91129
P0A452recA84.4298.460.0DNA recombination and repairAAL00560
B5TQV9PGM83.8999.480.0phosphoglucomutaseACH87041
A4VY17pdh83.0999.410.0Pyruvate dehydrogenaseABP91006
Q97RW0SP_067682.7893.500.0Transcription facotAAK74821
Q1JJJ3PepO80.1999.840.0EndopeptidaseABF32980
Q93MY4covR85.1199.585.06e-151Responder proteinAAK71319
Q9S1K2rr0183.9399.123.13e-143Response regulatorCAB54566
B3VA60CovR80.7999.563.67e-136serves to repress GAS virulence factor-encoding genesACE75886
P0A4H7CiaR84.1878.674.62e-109Two-component response regulatorAAK74935
U2W9V3SpxA290.9199.252.87e-88Transcriptional regulatorERL21461
U2UML5SpxA180.6099.264.60e-79Transcriptional regulatorERL19273
Q8DQV4spr047986.4697.969.69e-59essential geneAAK99283
Q8DP67spr132795.2998.843.55e-55essential geneAAL00131
Q8DRE1spr017781.0097.064.08e-55essential geneAAK98981
Q8CZ89spr017584.0998.883.66e-51pathogenitcity relatedAAK98979
Q04M32ilvC (SPD_0406)96.4799.710.0Ketol-acid reductoisomerase (NADP(+))ABJ55451
P67331spr008493.6967.481.60e-157pathogenitcity relatedAAK98888