Genome ID:GCA_015667455.1 PPRS_table
 

Probiotic potential risk score

ARGs (CARD) VFs (VFDB) PGs (PHI-base) PPRS
0162933.12

CARD

ARO accession ARO name Identity Coverage CARD name Accession no.
No hit found

Virulence Factor Database Search

Gene ID Gene name Identity Coverage e-value VF name VF category Accession no.
VFG005556tig/ropA94.78100.000.0Trigger factorStress survivalWP_011680653
VFG006089rfbD94.60100.000.0CapsuleImmune modulationWP_011681446
VFG006020STR_RS0526094.54100.000.0CapsuleImmune modulationWP_011227248
VFG006079STER_RS0708594.3398.330.0CapsuleImmune modulationWP_011681442
VFG006022rfbB93.79100.000.0CapsuleImmune modulationWP_002947383
VFG006075STER_RS0707592.3599.230.0CapsuleImmune modulationWP_011681440
VFG006011STER_RS0532091.2699.860.0CapsuleImmune modulationWP_011681177
VFG006046STR_RS0588091.08100.000.0CapsuleImmune modulationWP_011226149
VFG006052rfbA90.92100.000.0CapsuleImmune modulationWP_011226150
VFG005579eno90.58100.000.0Streptococcal enolaseExoenzymeWP_000022815
VFG005191fbp5490.4899.880.0FBPsAdherenceWP_011681101
VFG018652plr/gapA90.16100.000.0Streptococcal plasmin receptor/GAPDHAdherenceWP_006154814
VFG005324cbpD89.9693.500.0AutolysinExoenzymeWP_082302295
VFG006047STU_RS1464089.90100.000.0CapsuleImmune modulationWP_011226047
VFG005382srtA84.6799.870.0Sortase AExoenzymeWP_011681303
VFG006040STU_RS1463581.1390.283.95e-153CapsuleImmune modulationWP_011226046

PHIB-BLAST

Protein ID Gene name Identity Coverage e-value Function Gene ID
Q1JLQ2MntE96.0999.440.0Manganese HomeostasisABF32167
P67331spr008493.1998.180.0pathogenitcity relatedAAK98888
Q97S31metE92.6699.870.0Methionine biosynthesis enzymesAAK74738
Q1J943prsA291.8898.460.0Ribose-phosphate pyrophosphokinaseABF36968
Q99Z66ptsI89.9599.830.0Phosphoenolpyruvate-protein phosphotransferaseAAK34199
Q8DPC2potA89.8499.480.0ABC transporter ATP-binding protein - spermidine/putrescine transportAAL00050
Q8DYL6uvrB89.7499.850.0Excinuclease ABC, B subunitAE014259_2
P0C0B9bglB87.8899.330.0Putative phospho--glucosidaseAAK33487
D5AF41IMPDH87.8399.800.0Inosine-5'-monophosphate dehydrogenaseADE32434
Q97S30metF87.0698.960.0Methionine biosynthesis enzymesAAK74739
A4VWH9Eno86.4499.540.0EnolaseABP90468
A4VYE0gidA85.5898.750.0tRNA uridine 5-carboxymethylaminomethyl modification enzymeABP91129
P0A452recA85.1998.460.0DNA recombination and repairAAL00560
B5TQV9PGM84.7699.480.0phosphoglucomutaseACH87041
Q97RW0SP_067683.4493.500.0Transcription facotAAK74821
A4VY17pdh82.7999.410.0Pyruvate dehydrogenaseABP91006
A4VWD1mnmE82.6799.340.0Central tRNA-modifying GTPaseABP90420
Q93MY4covR85.5399.584.45e-151Responder proteinAAK71319
Q9S1K2rr0184.3899.127.87e-145Response regulatorCAB54566
R4Z8M6ciaR86.1698.689.72e-144Two component system response regulatorAIK75708
B3VA60CovR82.1099.564.64e-138serves to repress GAS virulence factor-encoding genesACE75886
U2W9V3SpxA291.6799.251.84e-88Transcriptional regulatorERL21461
U2UML5SpxA182.0999.267.61e-82Transcriptional regulatorERL19273
Q8DQV4spr047985.4297.966.93e-58essential geneAAK99283
Q8DP67spr132794.1298.848.73e-56essential geneAAL00131
Q8CZ89spr017585.2398.884.22e-52pathogenitcity relatedAAK98979
Q8DRE1spr017783.1587.251.62e-50essential geneAAK98981
P0C0H9srtA82.6197.876.73e-24SortaseAAK33966
Q04M32ilvC (SPD_0406)85.5999.710.0Ketol-acid reductoisomerase (NADP(+))ABJ55451