Genome ID:GCA_015670715.1 PPRS_table
 

Probiotic potential risk score

ARGs (CARD) VFs (VFDB) PGs (PHI-base) PPRS
0242937.64

CARD

ARO accession ARO name Identity Coverage CARD name Accession no.
No hit found

Virulence Factor Database Search

Gene ID Gene name Identity Coverage e-value VF name VF category Accession no.
VFG006011STER_RS0532096.99100.000.0CapsuleImmune modulationWP_011681177
VFG005964STER_RS0530094.7399.850.0CapsuleImmune modulationWP_011681173
VFG005556tig/ropA94.63100.000.0Trigger factorStress survivalWP_011680653
VFG006089rfbD94.60100.000.0CapsuleImmune modulationWP_011681446
VFG006022rfbB94.17100.000.0CapsuleImmune modulationWP_002947383
VFG005359plr/gapA93.87100.100.0Streptococcal plasmin receptor/GAPDHAdherenceWP_002899102
VFG006091STU_RS1626593.7199.760.0CapsuleImmune modulationWP_011226331
VFG005976STER_RS0530593.52100.000.0CapsuleImmune modulationWP_011681174
VFG006074STU_RS1623092.89100.000.0CapsuleImmune modulationWP_011226325
VFG006084STU_RS1624592.72100.000.0CapsuleImmune modulationWP_002948020
VFG006046STR_RS0588092.59100.000.0CapsuleImmune modulationWP_011226149
VFG006082STU_RS1624092.54100.000.0CapsuleImmune modulationWP_011226326
VFG006053STU_RS1464592.08100.000.0CapsuleImmune modulationWP_011226048
VFG006090STU_RS1626092.0099.900.0CapsuleImmune modulationWP_011226330
VFG006086STU_RS1625091.85100.000.0CapsuleImmune modulationWP_011226328
VFG006078STU_RS1623591.5799.430.0CapsuleImmune modulationWP_002948022
VFG006088STU_RS1625591.5699.910.0CapsuleImmune modulationWP_041828290
VFG006041rfbA91.15100.000.0CapsuleImmune modulationWP_011681286
VFG005191fbp5491.0299.880.0FBPsAdherenceWP_011681101
VFG005579eno90.27100.000.0Streptococcal enolaseExoenzymeWP_000022815
VFG006047STU_RS1464088.9299.710.0CapsuleImmune modulationWP_011226047
VFG005324cbpD88.3093.500.0AutolysinExoenzymeWP_082302295
VFG005382srtA84.1699.740.0Sortase AExoenzymeWP_011681303
VFG006004SPD_RS0177584.1096.201.46e-161CapsuleImmune modulationWP_001819836

PHIB-BLAST

Protein ID Gene name Identity Coverage e-value Function Gene ID
Q1JLQ2MntE96.0999.440.0Manganese HomeostasisABF32167
Q97S31metE93.0699.870.0Methionine biosynthesis enzymesAAK74738
P67331spr008492.8898.180.0pathogenitcity relatedAAK98888
Q1J943prsA292.1998.460.0Ribose-phosphate pyrophosphokinaseABF36968
Q04LP0PrtA91.28100.840.0serine proteaseABJ55268
Q8DPC2potA89.8499.480.0ABC transporter ATP-binding protein - spermidine/putrescine transportAAL00050
Q99Z66ptsI89.7899.830.0Phosphoenolpyruvate-protein phosphotransferaseAAK34199
Q8DYL6uvrB89.4499.850.0Excinuclease ABC, B subunitAE014259_2
D5AF41IMPDH87.6399.800.0Inosine-5'-monophosphate dehydrogenaseADE32434
P0C0B9bglB87.5499.330.0Putative phospho--glucosidaseAAK33487
Q97S30metF87.0698.960.0Methionine biosynthesis enzymesAAK74739
A4VWH9Eno86.4499.540.0EnolaseABP90468
A4VYE0gidA85.2698.750.0tRNA uridine 5-carboxymethylaminomethyl modification enzymeABP91129
P0A452recA85.1998.460.0DNA recombination and repairAAL00560
B5TQV9PGM84.7699.480.0phosphoglucomutaseACH87041
Q97RW0SP_067683.4493.500.0Transcription facotAAK74821
A4VY17pdh83.0999.410.0Pyruvate dehydrogenaseABP91006
A4VWD1mnmE82.4699.340.0Central tRNA-modifying GTPaseABP90420
Q93MY4covR85.1199.581.52e-150Responder proteinAAK71319
Q9S1K2rr0184.3899.123.35e-145Response regulatorCAB54566
R4Z8M6ciaR86.1698.689.63e-144Two component system response regulatorAIK75708
B3VA60CovR81.6699.561.36e-137serves to repress GAS virulence factor-encoding genesACE75886
U2W9V3SpxA291.6799.251.82e-88Transcriptional regulatorERL21461
U2UML5SpxA182.8499.261.68e-82Transcriptional regulatorERL19273
Q8DQV4spr047985.4297.966.87e-58essential geneAAK99283
Q8DP67spr132790.5998.841.07e-53essential geneAAL00131
Q8CZ89spr017585.2398.884.18e-52pathogenitcity relatedAAK98979
Q8DRE1spr017783.1587.251.61e-50essential geneAAK98981
Q04M32ilvC (SPD_0406)97.3599.710.0Ketol-acid reductoisomerase (NADP(+))ABJ55451