Genome ID:GCA_018375565.1 PPRS_table
 

Probiotic potential risk score

ARGs (CARD) VFs (VFDB) PGs (PHI-base) PPRS
0182631.62

CARD

ARO accession ARO name Identity Coverage CARD name Accession no.
No hit found

Virulence Factor Database Search

Gene ID Gene name Identity Coverage e-value VF name VF category Accession no.
VFG006083STER_RS0709098.35100.000.0CapsuleImmune modulationWP_011681443
VFG006011STER_RS0532097.47100.000.0CapsuleImmune modulationWP_011681177
VFG006087STER_RS0710096.7399.520.0CapsuleImmune modulationWP_011681445
VFG006079STER_RS0708596.0398.330.0CapsuleImmune modulationWP_011681442
VFG005964STER_RS0530095.7599.850.0CapsuleImmune modulationWP_011681173
VFG006089rfbD94.72100.000.0CapsuleImmune modulationWP_011681446
VFG005556tig/ropA94.63100.000.0Trigger factorStress survivalWP_011680653
VFG005976STER_RS0530594.06100.000.0CapsuleImmune modulationWP_011681174
VFG006022rfbB93.60100.000.0CapsuleImmune modulationWP_002947383
VFG006000STER_RS0531593.58100.000.0CapsuleImmune modulationWP_011681176
VFG006075STER_RS0707593.0099.230.0CapsuleImmune modulationWP_011681440
VFG006046STR_RS0588091.75100.000.0CapsuleImmune modulationWP_011226149
VFG006041rfbA91.15100.000.0CapsuleImmune modulationWP_011681286
VFG005580eno90.42100.000.0Streptococcal enolaseExoenzymeWP_000022813
VFG005191fbp5490.3699.940.0FBPsAdherenceWP_011681101
VFG005323cbpD90.12100.000.0AutolysinExoenzymeWP_011225268
VFG006047STU_RS1464088.3399.860.0CapsuleImmune modulationWP_011226047
VFG005382srtA84.2999.740.0Sortase AExoenzymeWP_011681303

PHIB-BLAST

Protein ID Gene name Identity Coverage e-value Function Gene ID
Q1JLQ2MntE96.0999.440.0Manganese HomeostasisABF32167
Q97S31metE93.0699.870.0Methionine biosynthesis enzymesAAK74738
P67331spr008492.5798.180.0pathogenitcity relatedAAK98888
Q1J943prsA292.1998.460.0Ribose-phosphate pyrophosphokinaseABF36968
Q99Z66ptsI89.9599.830.0Phosphoenolpyruvate-protein phosphotransferaseAAK34199
Q8DPC2potA89.8499.480.0ABC transporter ATP-binding protein - spermidine/putrescine transportAAL00050
Q8DYL6uvrB89.5999.850.0Excinuclease ABC, B subunitAE014259_2
Q97S30metF88.1198.960.0Methionine biosynthesis enzymesAAK74739
P0C0B9bglB87.8899.330.0Putative phospho--glucosidaseAAK33487
A4VWH9Eno86.4499.540.0EnolaseABP90468
A4VYE0gidA85.4298.750.0tRNA uridine 5-carboxymethylaminomethyl modification enzymeABP91129
P0A452recA85.1998.460.0DNA recombination and repairAAL00560
B5TQV9PGM84.7699.480.0phosphoglucomutaseACH87041
Q97RW0SP_067683.4493.500.0Transcription facotAAK74821
A4VWD1mnmE82.4699.340.0Central tRNA-modifying GTPaseABP90420
Q93MY4covR85.5399.584.15e-151Responder proteinAAK71319
Q9S1K2rr0184.8299.121.99e-145Response regulatorCAB54566
P0A4H7CiaR87.0099.114.83e-143Two-component response regulatorAAK74935
B3VA60CovR81.6699.561.28e-137serves to repress GAS virulence factor-encoding genesACE75886
U2W9V3SpxA291.6799.251.71e-88Transcriptional regulatorERL21461
U2UML5SpxA182.8499.261.58e-82Transcriptional regulatorERL19273
Q8DQV4spr047985.4297.966.46e-58essential geneAAK99283
Q8DP67spr132792.9498.841.67e-54essential geneAAL00131
Q8CZ89spr017585.2398.883.93e-52pathogenitcity relatedAAK98979
Q8DRE1spr017783.1587.251.51e-50essential geneAAK98981
Q04M32ilvC (SPD_0406)97.0699.710.0Ketol-acid reductoisomerase (NADP(+))ABJ55451