Genome ID:GCA_018381835.1 PPRS_table
 

Probiotic potential risk score

ARGs (CARD) VFs (VFDB) PGs (PHI-base) PPRS
0162933.12

CARD

ARO accession ARO name Identity Coverage CARD name Accession no.
No hit found

Virulence Factor Database Search

Gene ID Gene name Identity Coverage e-value VF name VF category Accession no.
VFG005964STER_RS0530095.3199.850.0CapsuleImmune modulationWP_011681173
VFG005976STER_RS0530594.87100.000.0CapsuleImmune modulationWP_011681174
VFG005556tig/ropA94.55100.000.0Trigger factorStress survivalWP_011680653
VFG006058STU_RS1465094.32100.140.0CapsuleImmune modulationWP_011226049
VFG006089rfbD94.25100.000.0CapsuleImmune modulationWP_011681446
VFG019077plr/gapA94.07100.000.0Streptococcal plasmin receptor/GAPDHAdherenceWP_000260685
VFG006022rfbB93.60100.000.0CapsuleImmune modulationWP_002947383
VFG005382srtA92.13100.000.0Sortase AExoenzymeWP_011681303
VFG006053STU_RS1464592.08100.000.0CapsuleImmune modulationWP_011226048
VFG006046STR_RS0588091.92100.000.0CapsuleImmune modulationWP_011226149
VFG006041rfbA91.03100.000.0CapsuleImmune modulationWP_011681286
VFG005323cbpD90.48100.000.0AutolysinExoenzymeWP_011225268
VFG005191fbp5490.3699.940.0FBPsAdherenceWP_011681101
VFG005579eno90.27100.000.0Streptococcal enolaseExoenzymeWP_000022815
VFG006047STU_RS1464088.6399.710.0CapsuleImmune modulationWP_011226047
VFG006004SPD_RS0177583.7996.043.20e-158CapsuleImmune modulationWP_001819836

PHIB-BLAST

Protein ID Gene name Identity Coverage e-value Function Gene ID
Q1JLQ2MntE96.0999.440.0Manganese HomeostasisABF32167
P67331spr008492.8898.180.0pathogenitcity relatedAAK98888
Q97S31metE92.3999.870.0Methionine biosynthesis enzymesAAK74738
Q1J943prsA292.1998.460.0Ribose-phosphate pyrophosphokinaseABF36968
Q99Z66ptsI90.1299.830.0Phosphoenolpyruvate-protein phosphotransferaseAAK34199
Q8DPC2potA90.1099.480.0ABC transporter ATP-binding protein - spermidine/putrescine transportAAL00050
Q8DYL6uvrB89.2999.850.0Excinuclease ABC, B subunitAE014259_2
P0C0B9bglB87.8899.330.0Putative phospho--glucosidaseAAK33487
D5AF41IMPDH87.6399.800.0Inosine-5'-monophosphate dehydrogenaseADE32434
Q97S30metF87.0698.960.0Methionine biosynthesis enzymesAAK74739
A4VWH9Eno86.4499.540.0EnolaseABP90468
A4VYE0gidA85.2698.750.0tRNA uridine 5-carboxymethylaminomethyl modification enzymeABP91129
P0A452recA85.1998.460.0DNA recombination and repairAAL00560
B5TQV9PGM84.7699.480.0phosphoglucomutaseACH87041
Q97RW0SP_067683.4493.500.0Transcription facotAAK74821
A4VY17pdh82.7999.410.0Pyruvate dehydrogenaseABP91006
A4VWD1mnmE82.4699.340.0Central tRNA-modifying GTPaseABP90420
A4VUT3NisK91.4999.582.64e-159Two-component signal-transduction systemsABP89872
A4VUT4NisR93.3999.562.61e-158Two-component signal-transduction systemsABP89873
Q93MY4covR85.5399.584.47e-151Responder proteinAAK71319
Q9S1K2rr0184.8299.121.19e-145Response regulatorCAB54566
R4Z8M6ciaR86.6198.685.17e-145Two component system response regulatorAIK75708
B3VA60CovR81.6699.561.38e-137serves to repress GAS virulence factor-encoding genesACE75886
U2W9V3SpxA291.6799.251.85e-88Transcriptional regulatorERL21461
Q8DQV4spr047985.4297.966.96e-58essential geneAAK99283
Q8DP67spr132792.9498.841.80e-54essential geneAAL00131
Q8CZ89spr017585.2398.884.24e-52pathogenitcity relatedAAK98979
Q8DRE1spr017783.1587.251.63e-50essential geneAAK98981
Q04M32ilvC (SPD_0406)97.3599.710.0Ketol-acid reductoisomerase (NADP(+))ABJ55451