Genome ID:GCA_018382425.1 PPRS_table
 

Probiotic potential risk score

ARGs (CARD) VFs (VFDB) PGs (PHI-base) PPRS
0142730.41

CARD

ARO accession ARO name Identity Coverage CARD name Accession no.
No hit found

Virulence Factor Database Search

Gene ID Gene name Identity Coverage e-value VF name VF category Accession no.
VFG006079STER_RS0708596.4598.330.0CapsuleImmune modulationWP_011681442
VFG006089rfbD95.42100.000.0CapsuleImmune modulationWP_011681446
VFG006083STER_RS0709095.25100.000.0CapsuleImmune modulationWP_011681443
VFG005556tig/ropA95.02100.000.0Trigger factorStress survivalWP_011680653
VFG006022rfbB93.70100.000.0CapsuleImmune modulationWP_002947383
VFG006075STER_RS0707592.8799.230.0CapsuleImmune modulationWP_011681440
VFG006087STER_RS0710092.3599.520.0CapsuleImmune modulationWP_011681445
VFG005191fbp5491.3399.940.0FBPsAdherenceWP_011681101
VFG006046STR_RS0588091.25100.000.0CapsuleImmune modulationWP_011226149
VFG006052rfbA90.92100.000.0CapsuleImmune modulationWP_011226150
VFG005579eno90.34100.000.0Streptococcal enolaseExoenzymeWP_000022815
VFG018652plr/gapA89.96100.000.0Streptococcal plasmin receptor/GAPDHAdherenceWP_006154814
VFG005324cbpD89.9693.500.0AutolysinExoenzymeWP_082302295
VFG005382srtA85.3499.740.0Sortase AExoenzymeWP_011681303

PHIB-BLAST

Protein ID Gene name Identity Coverage e-value Function Gene ID
Q1JLQ2MntE95.8199.440.0Manganese HomeostasisABF32167
Q97S31metE92.9299.870.0Methionine biosynthesis enzymesAAK74738
Q1J943prsA292.1998.460.0Ribose-phosphate pyrophosphokinaseABF36968
P67331spr008491.4499.390.0pathogenitcity relatedAAK98888
Q99Z66ptsI89.9599.830.0Phosphoenolpyruvate-protein phosphotransferaseAAK34199
Q8DPC2potA89.8499.480.0ABC transporter ATP-binding protein - spermidine/putrescine transportAAL00050
Q8DYL6uvrB89.7499.850.0Excinuclease ABC, B subunitAE014259_2
D5AF41IMPDH87.8399.800.0Inosine-5'-monophosphate dehydrogenaseADE32434
Q97S30metF87.0698.960.0Methionine biosynthesis enzymesAAK74739
A4VWH9Eno86.2199.540.0EnolaseABP90468
A4VYE0gidA85.5898.750.0tRNA uridine 5-carboxymethylaminomethyl modification enzymeABP91129
P0A452recA85.4598.460.0DNA recombination and repairAAL00560
B5TQV9PGM84.5999.480.0phosphoglucomutaseACH87041
Q97RW0SP_067683.1193.500.0Transcription facotAAK74821
A4VY17pdh83.0999.410.0Pyruvate dehydrogenaseABP91006
A4VWD1mnmE82.8999.340.0Central tRNA-modifying GTPaseABP90420
Q7WYI8mtsA80.1492.562.96e-173Substrate-binding lipoprotein of manganese transporterAIK76191
Q93MY4covR85.5399.583.92e-151Responder proteinAAK71319
Q9S1K2rr0184.8299.121.88e-145Response regulatorCAB54566
R4Z8M6ciaR86.1698.688.56e-144Two component system response regulatorAIK75708
B3VA60CovR82.1099.564.09e-138serves to repress GAS virulence factor-encoding genesACE75886
U2UML5SpxA182.8499.262.31e-82Transcriptional regulatorERL19273
Q8DQV4spr047985.4297.961.71e-57essential geneAAK99283
Q8DP67spr132794.1298.847.69e-56essential geneAAL00131
Q8CZ89spr017585.2398.883.71e-52pathogenitcity relatedAAK98979
Q8DRE1spr017783.1587.251.43e-50essential geneAAK98981
Q04M32ilvC (SPD_0406)85.8899.710.0Ketol-acid reductoisomerase (NADP(+))ABJ55451