Genome ID:GCA_018783915.1 PPRS_table
 

Probiotic potential risk score

ARGs (CARD) VFs (VFDB) PGs (PHI-base) PPRS
0232937.01

CARD

ARO accession ARO name Identity Coverage CARD name Accession no.
No hit found

Virulence Factor Database Search

Gene ID Gene name Identity Coverage e-value VF name VF category Accession no.
VFG006087STER_RS0710096.6599.520.0CapsuleImmune modulationWP_011681445
VFG006079STER_RS0708595.7598.330.0CapsuleImmune modulationWP_011681442
VFG006081rfbD94.95100.000.0CapsuleImmune modulationWP_014621820
VFG006020STR_RS0526094.67100.000.0CapsuleImmune modulationWP_011227248
VFG005556tig/ropA94.63100.000.0Trigger factorStress survivalWP_011680653
VFG006063STER_RS0706094.18100.000.0CapsuleImmune modulationWP_011681437
VFG006022rfbB93.70100.000.0CapsuleImmune modulationWP_002947383
VFG018652plr/gapA93.17100.000.0Streptococcal plasmin receptor/GAPDHAdherenceWP_006154814
VFG006075STER_RS0707592.6799.870.0CapsuleImmune modulationWP_011681440
VFG006059STER_RS0705592.27100.000.0CapsuleImmune modulationWP_011681436
VFG006011STER_RS0532091.3399.860.0CapsuleImmune modulationWP_011681177
VFG005191fbp5491.2799.940.0FBPsAdherenceWP_011681101
VFG006046STR_RS0588091.25100.000.0CapsuleImmune modulationWP_011226149
VFG006067STER_RS0706591.08100.000.0CapsuleImmune modulationWP_011681438
VFG006052rfbA90.92100.000.0CapsuleImmune modulationWP_011226150
VFG005579eno90.58100.000.0Streptococcal enolaseExoenzymeWP_000022815
VFG006054STER_RS0705090.5093.060.0CapsuleImmune modulationWP_041827753
VFG005324cbpD89.9693.500.0AutolysinExoenzymeWP_082302295
VFG006047STU_RS1464089.90100.000.0CapsuleImmune modulationWP_011226047
VFG006077STR_RS0691089.21100.000.0CapsuleImmune modulationWP_011227431
VFG006057STR_RS0688588.0499.890.0CapsuleImmune modulationWP_011227426
VFG005382srtA84.6799.870.0Sortase AExoenzymeWP_011681303
VFG006040STU_RS1463580.9890.281.71e-151CapsuleImmune modulationWP_011226046

PHIB-BLAST

Protein ID Gene name Identity Coverage e-value Function Gene ID
Q1JLQ2MntE96.0999.440.0Manganese HomeostasisABF32167
Q97S31metE92.6699.870.0Methionine biosynthesis enzymesAAK74738
P67331spr008492.5798.180.0pathogenitcity relatedAAK98888
Q1J943prsA292.1998.460.0Ribose-phosphate pyrophosphokinaseABF36968
Q04LP0PrtA90.12102.190.0serine proteaseABJ55268
Q8DPC2potA89.8499.480.0ABC transporter ATP-binding protein - spermidine/putrescine transportAAL00050
Q99Z66ptsI89.7899.830.0Phosphoenolpyruvate-protein phosphotransferaseAAK34199
Q8DYL6uvrB89.4499.850.0Excinuclease ABC, B subunitAE014259_2
D5AF41IMPDH87.6399.800.0Inosine-5'-monophosphate dehydrogenaseADE32434
P0C0B9bglB87.2099.330.0Putative phospho--glucosidaseAAK33487
Q97S30metF87.0698.960.0Methionine biosynthesis enzymesAAK74739
A4VWH9Eno86.4499.540.0EnolaseABP90468
A4VYE0gidA85.5898.750.0tRNA uridine 5-carboxymethylaminomethyl modification enzymeABP91129
P0A452recA84.9498.460.0DNA recombination and repairAAL00560
B5TQV9PGM84.5999.480.0phosphoglucomutaseACH87041
Q97RW0SP_067683.4493.500.0Transcription facotAAK74821
A4VWD1mnmE82.8999.340.0Central tRNA-modifying GTPaseABP90420
A4VY17pdh82.7999.410.0Pyruvate dehydrogenaseABP91006
Q93MY4covR85.5399.584.14e-151Responder proteinAAK71319
Q9S1K2rr0184.8299.122.34e-145Response regulatorCAB54566
R4Z8M6ciaR86.1698.689.04e-144Two component system response regulatorAIK75708
B3VA60CovR82.1099.564.32e-138serves to repress GAS virulence factor-encoding genesACE75886
U2W9V3SpxA291.6799.251.71e-88Transcriptional regulatorERL21461
U2UML5SpxA182.0999.267.09e-82Transcriptional regulatorERL19273
Q8DQV4spr047985.4297.966.45e-58essential geneAAK99283
Q8DP67spr132791.7798.842.67e-54essential geneAAL00131
Q8CZ89spr017585.2398.883.92e-52pathogenitcity relatedAAK98979
Q8DRE1spr017783.1587.251.51e-50essential geneAAK98981
Q04M32ilvC (SPD_0406)85.8899.710.0Ketol-acid reductoisomerase (NADP(+))ABJ55451