Probiotic potential risk score
| ARGs (CARD) | VFs (VFDB) | PGs (PHI-base) | PPRS |
|---|---|---|---|
| 1 | 23 | 29 | 37.03 |
CARD
| ARO accession | ARO name | Identity | Coverage | CARD name | Accession no. |
|---|---|---|---|---|---|
| ARO:3000186 | tet(M) | 99.37 | 100.00 | tet(M) | AB039845.1 |
Virulence Factor Database Search
PHIB-BLAST
| Protein ID | Gene name | Identity | Coverage | e-value | Function | Gene ID |
|---|---|---|---|---|---|---|
| Q1JLQ2 | MntE | 96.09 | 99.44 | 0.0 | Manganese Homeostasis | ABF32167 |
| P67331 | spr0084 | 92.57 | 98.18 | 0.0 | pathogenitcity related | AAK98888 |
| Q1J943 | prsA2 | 92.19 | 98.46 | 0.0 | Ribose-phosphate pyrophosphokinase | ABF36968 |
| Q97S31 | metE | 92.12 | 99.87 | 0.0 | Methionine biosynthesis enzymes | AAK74738 |
| Q04LP0 | PrtA | 90.03 | 102.19 | 0.0 | serine protease | ABJ55268 |
| Q99Z66 | ptsI | 89.95 | 99.83 | 0.0 | Phosphoenolpyruvate-protein phosphotransferase | AAK34199 |
| Q8DPC2 | potA | 89.84 | 99.48 | 0.0 | ABC transporter ATP-binding protein - spermidine/putrescine transport | AAL00050 |
| Q8DYL6 | uvrB | 89.44 | 99.85 | 0.0 | Excinuclease ABC, B subunit | AE014259_2 |
| D5AF41 | IMPDH | 87.83 | 99.80 | 0.0 | Inosine-5'-monophosphate dehydrogenase | ADE32434 |
| Q97S30 | metF | 87.76 | 98.96 | 0.0 | Methionine biosynthesis enzymes | AAK74739 |
| P0C0B9 | bglB | 87.54 | 99.33 | 0.0 | Putative phospho--glucosidase | AAK33487 |
| A4VWH9 | Eno | 86.44 | 99.54 | 0.0 | Enolase | ABP90468 |
| A4VYE0 | gidA | 85.58 | 98.75 | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | ABP91129 |
| P0A452 | recA | 85.19 | 98.46 | 0.0 | DNA recombination and repair | AAL00560 |
| B5TQV9 | PGM | 85.11 | 99.48 | 0.0 | phosphoglucomutase | ACH87041 |
| Q97RW0 | SP_0676 | 83.44 | 93.50 | 0.0 | Transcription facot | AAK74821 |
| A4VY17 | pdh | 83.38 | 99.41 | 0.0 | Pyruvate dehydrogenase | ABP91006 |
| A4VWD1 | mnmE | 82.67 | 99.34 | 0.0 | Central tRNA-modifying GTPase | ABP90420 |
| Q93MY4 | covR | 85.53 | 99.58 | 4.27e-151 | Responder protein | AAK71319 |
| Q9S1K2 | rr01 | 84.38 | 99.12 | 6.35e-145 | Response regulator | CAB54566 |
| R4Z8M6 | ciaR | 85.71 | 98.68 | 5.52e-143 | Two component system response regulator | AIK75708 |
| B3VA60 | CovR | 81.66 | 99.56 | 1.32e-137 | serves to repress GAS virulence factor-encoding genes | ACE75886 |
| U2W9V3 | SpxA2 | 91.67 | 99.25 | 1.77e-88 | Transcriptional regulator | ERL21461 |
| U2UML5 | SpxA1 | 82.84 | 99.26 | 2.52e-82 | Transcriptional regulator | ERL19273 |
| Q8DQV4 | spr0479 | 85.42 | 97.96 | 6.66e-58 | essential gene | AAK99283 |
| Q8DP67 | spr1327 | 92.94 | 98.84 | 1.72e-54 | essential gene | AAL00131 |
| Q8CZ89 | spr0175 | 85.23 | 98.88 | 4.05e-52 | pathogenitcity related | AAK98979 |
| Q8DRE1 | spr0177 | 83.15 | 87.25 | 1.56e-50 | essential gene | AAK98981 |
| Q04M32 | ilvC (SPD_0406) | 97.35 | 99.71 | 0.0 | Ketol-acid reductoisomerase (NADP(+)) | ABJ55451 |