Probiotic potential risk score
| ARGs (CARD) | VFs (VFDB) | PGs (PHI-base) | PPRS |
|---|---|---|---|
| 0 | 13 | 24 | 27.29 |
CARD
| ARO accession | ARO name | Identity | Coverage | CARD name | Accession no. |
|---|---|---|---|---|---|
| No hit found | |||||
Virulence Factor Database Search
| Gene ID | Gene name | Identity | Coverage | e-value | VF name | VF category | Accession no. |
|---|---|---|---|---|---|---|---|
| VFG044066 | ECSMS35_RS25765 | 99.55 | 100.00 | 0.0 | Colicin E1 | Exotoxin | WP_000447001 |
| VFG005556 | tig/ropA | 94.86 | 100.00 | 0.0 | Trigger factor | Stress survival | WP_011680653 |
| VFG006020 | STR_RS05260 | 94.54 | 100.00 | 0.0 | Capsule | Immune modulation | WP_011227248 |
| VFG006022 | rfbB | 93.89 | 100.00 | 0.0 | Capsule | Immune modulation | WP_002947383 |
| VFG006075 | STER_RS07075 | 92.35 | 99.23 | 0.0 | Capsule | Immune modulation | WP_011681440 |
| VFG005191 | fbp54 | 91.62 | 99.88 | 0.0 | FBPs | Adherence | WP_011681101 |
| VFG006046 | STR_RS05880 | 91.08 | 100.00 | 0.0 | Capsule | Immune modulation | WP_011226149 |
| VFG006011 | STER_RS05320 | 90.99 | 99.86 | 0.0 | Capsule | Immune modulation | WP_011681177 |
| VFG006052 | rfbA | 90.92 | 100.00 | 0.0 | Capsule | Immune modulation | WP_011226150 |
| VFG018652 | plr/gapA | 89.96 | 100.00 | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | WP_006154814 |
| VFG006047 | STU_RS14640 | 89.90 | 100.00 | 0.0 | Capsule | Immune modulation | WP_011226047 |
| VFG005323 | cbpD | 88.35 | 99.88 | 0.0 | Autolysin | Exoenzyme | WP_011225268 |
| VFG005382 | srtA | 84.67 | 99.87 | 0.0 | Sortase A | Exoenzyme | WP_011681303 |
PHIB-BLAST
| Protein ID | Gene name | Identity | Coverage | e-value | Function | Gene ID |
|---|---|---|---|---|---|---|
| Q1JLQ2 | MntE | 96.09 | 99.44 | 0.0 | Manganese Homeostasis | ABF32167 |
| P67331 | spr0084 | 92.57 | 98.18 | 0.0 | pathogenitcity related | AAK98888 |
| Q1J943 | prsA2 | 92.19 | 98.46 | 0.0 | Ribose-phosphate pyrophosphokinase | ABF36968 |
| Q99Z66 | ptsI | 90.12 | 99.83 | 0.0 | Phosphoenolpyruvate-protein phosphotransferase | AAK34199 |
| Q8DPC2 | potA | 89.84 | 99.48 | 0.0 | ABC transporter ATP-binding protein - spermidine/putrescine transport | AAL00050 |
| Q8DYL6 | uvrB | 89.59 | 99.85 | 0.0 | Excinuclease ABC, B subunit | AE014259_2 |
| D5AF41 | IMPDH | 87.83 | 99.80 | 0.0 | Inosine-5'-monophosphate dehydrogenase | ADE32434 |
| Q97S30 | metF | 87.76 | 98.96 | 0.0 | Methionine biosynthesis enzymes | AAK74739 |
| P0C0B9 | bglB | 87.20 | 99.33 | 0.0 | Putative phospho--glucosidase | AAK33487 |
| A4VYE0 | gidA | 85.74 | 98.75 | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | ABP91129 |
| P0A452 | recA | 85.45 | 98.46 | 0.0 | DNA recombination and repair | AAL00560 |
| B5TQV9 | PGM | 84.76 | 99.48 | 0.0 | phosphoglucomutase | ACH87041 |
| Q97RW0 | SP_0676 | 83.44 | 93.50 | 0.0 | Transcription facot | AAK74821 |
| A4VY17 | pdh | 83.09 | 99.41 | 0.0 | Pyruvate dehydrogenase | ABP91006 |
| A4VWD1 | mnmE | 82.89 | 99.34 | 0.0 | Central tRNA-modifying GTPase | ABP90420 |
| Q93MY4 | covR | 85.53 | 99.58 | 3.97e-151 | Responder protein | AAK71319 |
| Q9S1K2 | rr01 | 84.82 | 99.12 | 1.90e-145 | Response regulator | CAB54566 |
| R4Z8M6 | ciaR | 86.16 | 98.68 | 8.66e-144 | Two component system response regulator | AIK75708 |
| B3VA60 | CovR | 82.10 | 99.56 | 4.14e-138 | serves to repress GAS virulence factor-encoding genes | ACE75886 |
| U2UML5 | SpxA1 | 82.09 | 99.26 | 6.79e-82 | Transcriptional regulator | ERL19273 |
| Q8DQV4 | spr0479 | 85.42 | 97.96 | 6.18e-58 | essential gene | AAK99283 |
| Q8DP67 | spr1327 | 92.94 | 98.84 | 1.59e-54 | essential gene | AAL00131 |
| Q8CZ89 | spr0175 | 85.23 | 98.88 | 3.76e-52 | pathogenitcity related | AAK98979 |
| Q8DRE1 | spr0177 | 83.15 | 87.25 | 1.44e-50 | essential gene | AAK98981 |