Probiotic potential risk score
| ARGs (CARD) | VFs (VFDB) | PGs (PHI-base) | PPRS |
|---|---|---|---|
| 0 | 11 | 19 | 21.95 |
CARD
| ARO accession | ARO name | Identity | Coverage | CARD name | Accession no. |
|---|---|---|---|---|---|
| No hit found | |||||
Virulence Factor Database Search
| Gene ID | Gene name | Identity | Coverage | e-value | VF name | VF category | Accession no. |
|---|---|---|---|---|---|---|---|
| VFG006081 | rfbD | 94.95 | 100.00 | 0.0 | Capsule | Immune modulation | WP_014621820 |
| VFG005556 | tig/ropA | 94.78 | 100.00 | 0.0 | Trigger factor | Stress survival | WP_011680653 |
| VFG006074 | STU_RS16230 | 92.66 | 98.43 | 0.0 | Capsule | Immune modulation | WP_011226325 |
| VFG006084 | STU_RS16245 | 92.48 | 99.88 | 0.0 | Capsule | Immune modulation | WP_002948020 |
| VFG006082 | STU_RS16240 | 92.21 | 100.00 | 0.0 | Capsule | Immune modulation | WP_011226326 |
| VFG006086 | STU_RS16250 | 91.95 | 100.00 | 0.0 | Capsule | Immune modulation | WP_011226328 |
| VFG005191 | fbp54 | 91.39 | 99.94 | 0.0 | FBPs | Adherence | WP_011681101 |
| VFG006088 | STU_RS16255 | 91.39 | 99.91 | 0.0 | Capsule | Immune modulation | WP_041828290 |
| VFG006078 | STU_RS16235 | 90.91 | 99.15 | 0.0 | Capsule | Immune modulation | WP_002948022 |
| VFG005324 | cbpD | 90.07 | 93.50 | 0.0 | Autolysin | Exoenzyme | WP_082302295 |
| VFG005382 | srtA | 84.01 | 99.87 | 0.0 | Sortase A | Exoenzyme | WP_011681303 |
PHIB-BLAST
| Protein ID | Gene name | Identity | Coverage | e-value | Function | Gene ID |
|---|---|---|---|---|---|---|
| P67331 | spr0084 | 92.88 | 98.18 | 0.0 | pathogenitcity related | AAK98888 |
| Q1J943 | prsA2 | 92.19 | 98.46 | 0.0 | Ribose-phosphate pyrophosphokinase | ABF36968 |
| Q8DPC2 | potA | 89.84 | 99.48 | 0.0 | ABC transporter ATP-binding protein - spermidine/putrescine transport | AAL00050 |
| Q8DYL6 | uvrB | 89.44 | 99.85 | 0.0 | Excinuclease ABC, B subunit | AE014259_2 |
| P0C0B9 | bglB | 87.88 | 99.33 | 0.0 | Putative phospho--glucosidase | AAK33487 |
| D5AF41 | IMPDH | 87.83 | 99.80 | 0.0 | Inosine-5'-monophosphate dehydrogenase | ADE32434 |
| A4VYE0 | gidA | 85.58 | 98.75 | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | ABP91129 |
| P0A452 | recA | 85.45 | 98.46 | 0.0 | DNA recombination and repair | AAL00560 |
| A4VY17 | pdh | 83.38 | 99.41 | 0.0 | Pyruvate dehydrogenase | ABP91006 |
| A4VWD1 | mnmE | 82.67 | 99.34 | 0.0 | Central tRNA-modifying GTPase | ABP90420 |
| Q93MY4 | covR | 85.53 | 99.58 | 2.76e-151 | Responder protein | AAK71319 |
| Q9S1K2 | rr01 | 84.82 | 99.12 | 1.32e-145 | Response regulator | CAB54566 |
| R4Z8M6 | ciaR | 86.16 | 98.68 | 6.03e-144 | Two component system response regulator | AIK75708 |
| B3VA60 | CovR | 82.10 | 99.56 | 2.88e-138 | serves to repress GAS virulence factor-encoding genes | ACE75886 |
| U2UML5 | SpxA1 | 82.09 | 99.26 | 4.72e-82 | Transcriptional regulator | ERL19273 |
| Q8DQV4 | spr0479 | 85.42 | 97.96 | 1.21e-57 | essential gene | AAK99283 |
| Q8CZ89 | spr0175 | 85.23 | 98.88 | 2.62e-52 | pathogenitcity related | AAK98979 |
| Q8DRE1 | spr0177 | 83.15 | 87.25 | 1.00e-50 | essential gene | AAK98981 |
| Q04M32 | ilvC (SPD_0406) | 85.88 | 99.71 | 0.0 | Ketol-acid reductoisomerase (NADP(+)) | ABJ55451 |