ORF_ID e_value Gene_name EC_number CAZy COGs Description
BCDPMDNO_00001 1.3e-257 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BCDPMDNO_00002 8.2e-202 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
BCDPMDNO_00003 2.7e-28 yyzM S Protein conserved in bacteria
BCDPMDNO_00004 8.6e-204 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
BCDPMDNO_00005 1.4e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
BCDPMDNO_00006 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BCDPMDNO_00007 1.7e-39 yabO J Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
BCDPMDNO_00008 2.1e-61 divIC D Septum formation initiator
BCDPMDNO_00010 1.3e-240 XK27_09285 3.5.2.6 V Beta-lactamase enzyme family
BCDPMDNO_00011 3.8e-240 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
BCDPMDNO_00012 3.4e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
BCDPMDNO_00013 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BCDPMDNO_00014 1.6e-134 L Transposase
BCDPMDNO_00015 9.4e-46 L transposase activity
BCDPMDNO_00016 2.5e-22 L Transposase
BCDPMDNO_00017 1.2e-55 L transposition
BCDPMDNO_00018 2e-88 L Integrase core domain protein
BCDPMDNO_00031 5.3e-11
BCDPMDNO_00037 8.6e-140 mreC M Involved in formation and maintenance of cell shape
BCDPMDNO_00038 2.2e-88 mreD M Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
BCDPMDNO_00039 5.1e-87 usp 3.5.1.28 CBM50 S CHAP domain
BCDPMDNO_00040 1.2e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BCDPMDNO_00041 9.5e-26
BCDPMDNO_00042 2.9e-218 araT 2.6.1.1 E Aminotransferase
BCDPMDNO_00043 7e-144 recO L Involved in DNA repair and RecF pathway recombination
BCDPMDNO_00044 1.3e-179 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
BCDPMDNO_00045 4.2e-34 acpP1 IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
BCDPMDNO_00046 2e-129 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
BCDPMDNO_00047 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BCDPMDNO_00048 1.3e-276 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BCDPMDNO_00049 3.7e-185 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
BCDPMDNO_00050 1.4e-101 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BCDPMDNO_00051 2.3e-295 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
BCDPMDNO_00052 1e-49 L transposase activity
BCDPMDNO_00053 1.7e-51 L transposition
BCDPMDNO_00054 1.2e-160 S CHAP domain
BCDPMDNO_00055 3.4e-241 purD 6.3.4.13 F Belongs to the GARS family
BCDPMDNO_00056 4.9e-76 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BCDPMDNO_00057 2.2e-204 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BCDPMDNO_00058 9.2e-141 1.1.1.169 H Ketopantoate reductase
BCDPMDNO_00059 8.7e-248 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BCDPMDNO_00060 0.0 argS 6.1.1.19 J Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
BCDPMDNO_00061 8.2e-70 argR K Regulates arginine biosynthesis genes
BCDPMDNO_00062 1e-57 ymcA 3.6.3.21 S Belongs to the UPF0342 family
BCDPMDNO_00063 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BCDPMDNO_00064 6.4e-35 S Protein of unknown function (DUF3021)
BCDPMDNO_00065 1.2e-61 KT phosphorelay signal transduction system
BCDPMDNO_00067 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BCDPMDNO_00069 7.8e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
BCDPMDNO_00070 5.5e-28 tag 3.2.2.20 L 3-methyladenine DNA glycosylase
BCDPMDNO_00071 3.8e-232 cinA 3.5.1.42 S Belongs to the CinA family
BCDPMDNO_00072 1.1e-196 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BCDPMDNO_00073 2.3e-66 spxA_2 1.20.4.1 P Belongs to the ArsC family
BCDPMDNO_00079 2.6e-10
BCDPMDNO_00082 1.9e-07
BCDPMDNO_00087 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BCDPMDNO_00088 8.6e-237 pepS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
BCDPMDNO_00089 5.5e-36 XK27_02060 S Transglycosylase associated protein
BCDPMDNO_00090 2.6e-55 badR K DNA-binding transcription factor activity
BCDPMDNO_00091 3.5e-97 S reductase
BCDPMDNO_00092 1.1e-86 L Integrase core domain protein
BCDPMDNO_00093 2.7e-39 L transposition
BCDPMDNO_00095 2.1e-76 yocD 3.4.17.13 V carboxypeptidase activity
BCDPMDNO_00096 4.6e-91 yocD 3.4.17.13 V proteins, homologs of microcin C7 resistance protein MccF
BCDPMDNO_00098 1.3e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
BCDPMDNO_00099 1.7e-182 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BCDPMDNO_00100 1.1e-83 S Putative small multi-drug export protein
BCDPMDNO_00101 2.4e-75 ctsR K Belongs to the CtsR family
BCDPMDNO_00102 0.0 clpC O Belongs to the ClpA ClpB family
BCDPMDNO_00103 2.4e-101 dacA 3.4.16.4 M Belongs to the peptidase S11 family
BCDPMDNO_00104 8.4e-53 dacA 3.4.16.4 M Belongs to the peptidase S11 family
BCDPMDNO_00105 4.2e-231 dacA 3.4.16.4 M Belongs to the peptidase S11 family
BCDPMDNO_00106 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
BCDPMDNO_00107 2e-143 S SseB protein N-terminal domain
BCDPMDNO_00108 1.1e-112 cysE 2.3.1.30 E serine acetyltransferase
BCDPMDNO_00109 1.7e-259 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
BCDPMDNO_00110 4.2e-68 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
BCDPMDNO_00113 5.7e-135 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BCDPMDNO_00114 7e-92 yacP S RNA-binding protein containing a PIN domain
BCDPMDNO_00115 2.4e-153 degV S DegV family
BCDPMDNO_00116 1.8e-31 K helix-turn-helix
BCDPMDNO_00117 1.6e-182 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BCDPMDNO_00118 2e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BCDPMDNO_00119 9.5e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
BCDPMDNO_00120 9.1e-34 K Peptidase S24-like
BCDPMDNO_00122 8.4e-102 S Lantibiotic dehydratase, C terminus
BCDPMDNO_00123 0.0 S Lantibiotic dehydratase, C terminus
BCDPMDNO_00124 2.4e-231 spaC2 V Lanthionine synthetase C family protein
BCDPMDNO_00125 2.5e-183 EGP Major facilitator Superfamily
BCDPMDNO_00126 1.6e-91 3.6.4.12 K Divergent AAA domain protein
BCDPMDNO_00127 1.4e-50 int L Belongs to the 'phage' integrase family
BCDPMDNO_00128 1.3e-27 int L Belongs to the 'phage' integrase family
BCDPMDNO_00129 4.4e-13 S Helix-turn-helix domain
BCDPMDNO_00131 1.1e-133
BCDPMDNO_00132 6.2e-42
BCDPMDNO_00133 9.4e-183 L Transposase and inactivated derivatives IS30 family
BCDPMDNO_00134 6.8e-76 isp2 S pathogenesis
BCDPMDNO_00135 3.7e-90 tnp L Transposase
BCDPMDNO_00136 4.6e-42 capA M Bacterial capsule synthesis protein PGA_cap
BCDPMDNO_00137 4.3e-109 capA M Bacterial capsule synthesis protein
BCDPMDNO_00138 2.8e-57 capA M Bacterial capsule synthesis protein
BCDPMDNO_00139 1e-38 gcvR T UPF0237 protein
BCDPMDNO_00140 2.5e-242 XK27_08635 S UPF0210 protein
BCDPMDNO_00141 3.2e-135 ais G Phosphoglycerate mutase
BCDPMDNO_00142 8.8e-142 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
BCDPMDNO_00143 5e-102 acmA 3.2.1.17 NU amidase activity
BCDPMDNO_00144 5.3e-198 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
BCDPMDNO_00145 1.5e-71 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BCDPMDNO_00146 7.5e-298 dnaK O Heat shock 70 kDa protein
BCDPMDNO_00147 4.2e-190 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
BCDPMDNO_00148 7.7e-140 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
BCDPMDNO_00149 1.6e-137 thiD 2.7.1.35, 2.7.1.49, 2.7.4.7 H phosphomethylpyrimidine kinase
BCDPMDNO_00150 1.6e-61 hmpT S membrane
BCDPMDNO_00163 0.0 amiA E ABC transporter, substrate-binding protein, family 5
BCDPMDNO_00164 2.5e-169 L Transposase
BCDPMDNO_00165 3.3e-55 amd 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
BCDPMDNO_00166 4.2e-233 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
BCDPMDNO_00167 3.2e-86
BCDPMDNO_00168 1.6e-77 sigH K DNA-templated transcription, initiation
BCDPMDNO_00169 1.6e-149 ykuT M mechanosensitive ion channel
BCDPMDNO_00170 4.9e-219 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
BCDPMDNO_00171 6.3e-73 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
BCDPMDNO_00172 2.2e-309 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
BCDPMDNO_00173 2.4e-83 XK27_03960 S Protein of unknown function (DUF3013)
BCDPMDNO_00174 1e-56 mutT3 3.6.1.13, 3.6.1.55 L NUDIX domain
BCDPMDNO_00175 1.8e-178 prmA J Ribosomal protein L11 methyltransferase
BCDPMDNO_00176 4.4e-135 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
BCDPMDNO_00177 1.2e-29 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
BCDPMDNO_00178 4.7e-137 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
BCDPMDNO_00179 2.9e-183 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
BCDPMDNO_00180 1.8e-83 nrdI F Belongs to the NrdI family
BCDPMDNO_00181 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BCDPMDNO_00182 2.3e-75 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
BCDPMDNO_00183 1.4e-09 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
BCDPMDNO_00184 4e-28 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
BCDPMDNO_00185 1.6e-64 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
BCDPMDNO_00186 2.5e-48 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
BCDPMDNO_00187 1.7e-237 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BCDPMDNO_00188 3.3e-112 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
BCDPMDNO_00189 1.2e-112 fnr5 K Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
BCDPMDNO_00190 9.3e-201 yhjX P Major Facilitator
BCDPMDNO_00191 9.2e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BCDPMDNO_00192 5e-94 V VanZ like family
BCDPMDNO_00195 1.7e-123 glnQ E abc transporter atp-binding protein
BCDPMDNO_00196 1.5e-275 glnP P ABC transporter
BCDPMDNO_00197 2.6e-152 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
BCDPMDNO_00198 5.2e-136 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
BCDPMDNO_00199 3.8e-186 tagO 2.7.8.33, 2.7.8.35 M transferase
BCDPMDNO_00200 9.5e-144 sufC O ABC-type transport system involved in Fe-S cluster assembly, ATPase component
BCDPMDNO_00201 1.4e-234 sufD O assembly protein SufD
BCDPMDNO_00202 1.5e-236 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BCDPMDNO_00203 1.1e-74 nifU C SUF system FeS assembly protein, NifU family
BCDPMDNO_00204 2.2e-273 sufB O assembly protein SufB
BCDPMDNO_00205 2.4e-19 oppA E ABC transporter substrate-binding protein
BCDPMDNO_00206 9.7e-138 oppA E ABC transporter substrate-binding protein
BCDPMDNO_00207 1.9e-27 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
BCDPMDNO_00208 6.6e-11 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
BCDPMDNO_00209 2.7e-45 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
BCDPMDNO_00210 2e-59 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
BCDPMDNO_00211 3e-27 oppD P Belongs to the ABC transporter superfamily
BCDPMDNO_00212 2.5e-32 oppD P Belongs to the ABC transporter superfamily
BCDPMDNO_00213 3.3e-68 oppD P Belongs to the ABC transporter superfamily
BCDPMDNO_00214 1.3e-44 oppD P Belongs to the ABC transporter superfamily
BCDPMDNO_00215 8.7e-165 oppF P Belongs to the ABC transporter superfamily
BCDPMDNO_00216 5.1e-11
BCDPMDNO_00217 4.3e-158 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BCDPMDNO_00218 7.4e-183 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BCDPMDNO_00219 6e-128 K sequence-specific DNA binding
BCDPMDNO_00220 0.0 KLT serine threonine protein kinase
BCDPMDNO_00221 1.9e-223 EGP Major facilitator Superfamily
BCDPMDNO_00222 3.1e-72 adcR K transcriptional
BCDPMDNO_00223 1.9e-135 adcC P ABC transporter, ATP-binding protein
BCDPMDNO_00224 6.9e-126 adcB P ABC transporter (Permease
BCDPMDNO_00225 2.1e-163 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
BCDPMDNO_00226 4.3e-65 ptsG 2.7.1.199, 2.7.1.208 G pts system
BCDPMDNO_00227 9.2e-25 ptsG 2.7.1.199, 2.7.1.208 G pts system
BCDPMDNO_00228 1.4e-154 ptsG 2.7.1.199, 2.7.1.208, 2.7.1.211 G pts system
BCDPMDNO_00229 8.5e-108 ptsG 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BCDPMDNO_00230 2e-157 rgfB 3.1.3.90 L Endonuclease/Exonuclease/phosphatase family
BCDPMDNO_00231 2.8e-257 pgi 5.3.1.9 G Belongs to the GPI family
BCDPMDNO_00232 4.2e-127 yeeN K transcriptional regulatory protein
BCDPMDNO_00233 9.8e-50 yajC U protein transport
BCDPMDNO_00234 1.1e-141 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BCDPMDNO_00235 1.7e-145 cdsA 2.7.7.41 S Belongs to the CDS family
BCDPMDNO_00236 1.2e-230 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
BCDPMDNO_00237 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
BCDPMDNO_00238 0.0 WQ51_06230 S ABC transporter substrate binding protein
BCDPMDNO_00239 7.5e-141 cmpC S abc transporter atp-binding protein
BCDPMDNO_00240 1.3e-42 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BCDPMDNO_00241 4.1e-287 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
BCDPMDNO_00242 2.6e-77 L transposase activity
BCDPMDNO_00243 1.7e-51 L transposition
BCDPMDNO_00244 4.8e-34 L Integrase core domain protein
BCDPMDNO_00247 4e-42
BCDPMDNO_00248 2.7e-28 J TM2 domain
BCDPMDNO_00249 5.6e-166 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
BCDPMDNO_00250 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
BCDPMDNO_00251 7.4e-25 secE U Belongs to the SecE SEC61-gamma family
BCDPMDNO_00252 8.4e-96 nusG K Participates in transcription elongation, termination and antitermination
BCDPMDNO_00253 1.6e-85 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I phosphatidate phosphatase activity
BCDPMDNO_00254 7e-56 cof Q phosphatase activity
BCDPMDNO_00255 3.3e-36 cof Q phosphatase activity
BCDPMDNO_00256 5.6e-138 glcR K transcriptional regulator (DeoR family)
BCDPMDNO_00257 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
BCDPMDNO_00258 9.4e-183 L Transposase and inactivated derivatives IS30 family
BCDPMDNO_00259 1.7e-93 S thiolester hydrolase activity
BCDPMDNO_00260 8.1e-145 S COG1073 Hydrolases of the alpha beta superfamily
BCDPMDNO_00261 2.8e-279 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BCDPMDNO_00262 2.1e-151 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
BCDPMDNO_00263 3.5e-76 yhaI L Membrane
BCDPMDNO_00264 6e-260 pepC 3.4.22.40 E aminopeptidase
BCDPMDNO_00265 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
BCDPMDNO_00266 2.5e-109 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
BCDPMDNO_00267 3.1e-95 ypsA S Belongs to the UPF0398 family
BCDPMDNO_00268 5.1e-51 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
BCDPMDNO_00269 5.1e-223 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
BCDPMDNO_00270 0.0 mapZ D Early cell division protein that marks the future cell division site and supports proper FtsZ ring positioning
BCDPMDNO_00271 9.4e-183 L Transposase and inactivated derivatives IS30 family
BCDPMDNO_00272 0.0 snf 2.7.11.1 L Superfamily II DNA RNA helicases, SNF2 family'
BCDPMDNO_00273 2.5e-23
BCDPMDNO_00274 1.5e-255 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
BCDPMDNO_00275 4.6e-58 XK27_09675 K -acetyltransferase
BCDPMDNO_00276 0.0 mltG ADL Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BCDPMDNO_00277 1.6e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
BCDPMDNO_00278 4.3e-83 L Integrase core domain protein
BCDPMDNO_00279 2.9e-165 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BCDPMDNO_00280 2.7e-45 acyP 3.6.1.7 C Belongs to the acylphosphatase family
BCDPMDNO_00281 1.4e-130 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BCDPMDNO_00282 6.1e-93 XK27_09705 6.1.1.14 S HD superfamily hydrolase
BCDPMDNO_00283 8.8e-98 ybhL S Belongs to the BI1 family
BCDPMDNO_00286 9.6e-244 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
BCDPMDNO_00287 9.6e-92 K transcriptional regulator
BCDPMDNO_00288 7.6e-36 yneF S UPF0154 protein
BCDPMDNO_00289 1.3e-148 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
BCDPMDNO_00290 7.1e-186 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BCDPMDNO_00291 3.5e-99 XK27_09740 S Phosphoesterase
BCDPMDNO_00292 5.4e-86 ykuL S CBS domain
BCDPMDNO_00293 3.3e-138 xerD L tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site
BCDPMDNO_00294 3.1e-122 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BCDPMDNO_00295 2.3e-99 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BCDPMDNO_00296 1.6e-140 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
BCDPMDNO_00297 8.6e-43 yidD S Could be involved in insertion of integral membrane proteins into the membrane
BCDPMDNO_00298 1.2e-258 trkH P Cation transport protein
BCDPMDNO_00299 1.8e-248 trkA P Potassium transporter peripheral membrane component
BCDPMDNO_00300 1.6e-96 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
BCDPMDNO_00301 3.2e-90 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BCDPMDNO_00302 7e-113 bcrC 3.6.1.27 I Membrane-associated phospholipid phosphatase
BCDPMDNO_00303 2.5e-161 K sequence-specific DNA binding
BCDPMDNO_00304 1.9e-33 V protein secretion by the type I secretion system
BCDPMDNO_00305 1.6e-109 V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
BCDPMDNO_00306 6.9e-34 V protein secretion by the type I secretion system
BCDPMDNO_00307 3.6e-62 comA V protein secretion by the type I secretion system
BCDPMDNO_00308 1.4e-69 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
BCDPMDNO_00309 1.6e-43 yhaI L Membrane
BCDPMDNO_00310 2.6e-35 S Domain of unknown function (DUF4173)
BCDPMDNO_00311 1.6e-53 S Domain of unknown function (DUF4173)
BCDPMDNO_00312 7.5e-94 ureI S AmiS/UreI family transporter
BCDPMDNO_00313 7.6e-46 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
BCDPMDNO_00314 7.8e-54 ureB 3.5.1.5 E Belongs to the urease beta subunit family
BCDPMDNO_00315 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
BCDPMDNO_00316 6.6e-78 ureE O enzyme active site formation
BCDPMDNO_00317 5.3e-130 ureF O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
BCDPMDNO_00318 9.5e-112 ureG KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
BCDPMDNO_00319 5.8e-160 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
BCDPMDNO_00320 3.5e-177 cbiM P PDGLE domain
BCDPMDNO_00321 2.9e-137 P cobalt transport protein
BCDPMDNO_00322 1.6e-131 cbiO P ABC transporter
BCDPMDNO_00323 1.8e-153 ET amino acid transport
BCDPMDNO_00324 3.7e-165 metQ M Belongs to the NlpA lipoprotein family
BCDPMDNO_00325 1.3e-87 dapE 3.5.1.18 E COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases
BCDPMDNO_00326 1.4e-62 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase activity
BCDPMDNO_00327 1.7e-63 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase activity
BCDPMDNO_00328 1.5e-189 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BCDPMDNO_00329 3e-98 metI P ABC transporter (Permease
BCDPMDNO_00330 1.1e-207 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
BCDPMDNO_00331 3.2e-158 salL 2.5.1.63, 2.5.1.94 S S-adenosyl-l-methionine hydroxide adenosyltransferase
BCDPMDNO_00332 8e-94 S UPF0397 protein
BCDPMDNO_00333 0.0 ykoD P abc transporter atp-binding protein
BCDPMDNO_00334 1.7e-148 cbiQ P cobalt transport
BCDPMDNO_00335 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BCDPMDNO_00336 1.4e-11 ulaG S L-ascorbate 6-phosphate lactonase
BCDPMDNO_00337 1.4e-121 ktrA P COG0569 K transport systems, NAD-binding component
BCDPMDNO_00338 7.2e-245 P COG0168 Trk-type K transport systems, membrane components
BCDPMDNO_00339 1.1e-130 rsmG 2.1.1.170 J Ribosomal RNA small subunit methyltransferase G
BCDPMDNO_00340 2.1e-91 yceD K metal-binding, possibly nucleic acid-binding protein
BCDPMDNO_00341 1.8e-122 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
BCDPMDNO_00342 4.1e-281 T PhoQ Sensor
BCDPMDNO_00343 2.8e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BCDPMDNO_00344 1.3e-218 dnaB L Replication initiation and membrane attachment
BCDPMDNO_00345 4e-167 dnaI L Primosomal protein DnaI
BCDPMDNO_00346 1.1e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
BCDPMDNO_00347 3.5e-283 P ABC transporter transmembrane region
BCDPMDNO_00349 7.5e-50 L Transposase
BCDPMDNO_00350 1.1e-147 L Transposase
BCDPMDNO_00351 9.8e-25 S Protein of unknown function DUF262
BCDPMDNO_00352 4.6e-233 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
BCDPMDNO_00353 1.5e-62 manO S protein conserved in bacteria
BCDPMDNO_00354 1.1e-169 manN G PTS system mannose fructose sorbose family IID component
BCDPMDNO_00355 2.7e-117 manM G pts system
BCDPMDNO_00356 9.8e-183 manL 2.7.1.191 G pts system
BCDPMDNO_00357 3.7e-140 XK27_00940 1.2.1.70, 3.5.1.9 S Metal-dependent hydrolase
BCDPMDNO_00358 1e-153 yitU 3.1.3.104 S hydrolases of the HAD superfamily
BCDPMDNO_00359 1.5e-248 pbuO S permease
BCDPMDNO_00360 1.4e-77 ydiB 2.7.1.221, 5.1.1.1 M ATPase or kinase
BCDPMDNO_00361 3.2e-92 XK27_05885 2.3.1.82 M Acetyltransferase GNAT Family
BCDPMDNO_00362 7.2e-220 brpA K Transcriptional
BCDPMDNO_00363 3.9e-81 rimP S Required for maturation of 30S ribosomal subunits
BCDPMDNO_00364 4.1e-212 nusA K Participates in both transcription termination and antitermination
BCDPMDNO_00365 1e-47 ylxR K Nucleic-acid-binding protein implicated in transcription termination
BCDPMDNO_00366 1.4e-41 ylxQ J ribosomal protein
BCDPMDNO_00367 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BCDPMDNO_00368 1.7e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BCDPMDNO_00369 2e-22 yvdD 3.2.2.10 S Belongs to the LOG family
BCDPMDNO_00370 4e-38 yvdD 3.2.2.10 L Belongs to the LOG family
BCDPMDNO_00371 1.4e-234 femA 2.3.2.10, 2.3.2.16, 2.3.2.17, 2.3.2.18 V protein involved in methicillin resistance
BCDPMDNO_00372 2.9e-276 murE 6.3.2.13, 6.3.2.7 M to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BCDPMDNO_00373 1e-282 ytgP S Membrane protein involved in the export of O-antigen and teichoic acid
BCDPMDNO_00374 1e-87 pacL 3.6.3.8, 3.6.3.9 P cation transport ATPase
BCDPMDNO_00375 4.7e-202 metB 2.5.1.48, 4.4.1.8 E cystathionine
BCDPMDNO_00376 1e-223 malY 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
BCDPMDNO_00378 4.4e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BCDPMDNO_00379 2.9e-105 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
BCDPMDNO_00380 1.2e-74 ylbF S Belongs to the UPF0342 family
BCDPMDNO_00381 7.1e-46 ylbG S UPF0298 protein
BCDPMDNO_00382 1.1e-212 livJ E COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component
BCDPMDNO_00383 1.9e-145 livH E Belongs to the binding-protein-dependent transport system permease family
BCDPMDNO_00384 1.4e-138 livM E Belongs to the binding-protein-dependent transport system permease family
BCDPMDNO_00385 8.2e-137 livG E COG0411 ABC-type branched-chain amino acid transport systems, ATPase component
BCDPMDNO_00386 2.1e-123 livF E COG0410 ABC-type branched-chain amino acid transport systems, ATPase component
BCDPMDNO_00387 9.5e-71 acuB S IMP dehydrogenase activity
BCDPMDNO_00388 3.3e-43 acuB S IMP dehydrogenase activity
BCDPMDNO_00389 2.8e-168 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
BCDPMDNO_00390 1.4e-110 yvyE 3.4.13.9 S YigZ family
BCDPMDNO_00391 8.2e-254 comFA L Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
BCDPMDNO_00392 3.4e-123 comFC S Competence protein
BCDPMDNO_00393 9.4e-95 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BCDPMDNO_00394 9.4e-183 L Transposase and inactivated derivatives IS30 family
BCDPMDNO_00402 3.5e-166 ppaC 3.6.1.1 C inorganic pyrophosphatase
BCDPMDNO_00403 6.4e-108 S Domain of unknown function (DUF1803)
BCDPMDNO_00404 7.8e-102 ygaC J Belongs to the UPF0374 family
BCDPMDNO_00405 7.3e-133 recX 2.4.1.337 GT4 S Regulatory protein RecX
BCDPMDNO_00406 5.2e-259 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BCDPMDNO_00407 8e-193 asnA 6.3.1.1 E aspartate--ammonia ligase
BCDPMDNO_00408 2.4e-256 lysC 2.7.2.4 E Belongs to the aspartokinase family
BCDPMDNO_00409 3.3e-115 S Haloacid dehalogenase-like hydrolase
BCDPMDNO_00410 2.4e-139 phaB 5.3.3.14, 5.3.3.18 I Belongs to the enoyl-CoA hydratase isomerase family
BCDPMDNO_00411 8.9e-72 marR K Transcriptional regulator, MarR family
BCDPMDNO_00412 2.3e-173 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BCDPMDNO_00413 3.3e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
BCDPMDNO_00414 6.8e-173 fabK 1.3.1.9 S 2-Nitropropane dioxygenase
BCDPMDNO_00415 8.5e-165 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
BCDPMDNO_00416 1.3e-126 IQ reductase
BCDPMDNO_00417 2.6e-233 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
BCDPMDNO_00418 1.1e-54 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
BCDPMDNO_00419 1.5e-71 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
BCDPMDNO_00420 1.7e-257 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
BCDPMDNO_00421 1.6e-160 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BCDPMDNO_00422 6.7e-139 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
BCDPMDNO_00423 4.7e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
BCDPMDNO_00424 1.8e-127 tnp L Transposase
BCDPMDNO_00425 9.2e-207 rny D Endoribonuclease that initiates mRNA decay
BCDPMDNO_00426 4.7e-85 L Transposase
BCDPMDNO_00427 5.6e-114 fruR K transcriptional
BCDPMDNO_00428 6.5e-165 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
BCDPMDNO_00429 9.6e-53 fruA 2.7.1.202 GT PTS system, Lactose/Cellobiose specific IIB subunit
BCDPMDNO_00430 1.7e-21 fruA 2.7.1.202 GT PTS system, Lactose/Cellobiose specific IIB subunit
BCDPMDNO_00431 1.4e-25 fruA 2.7.1.202 G phosphotransferase system
BCDPMDNO_00432 2.2e-104 fruA 2.7.1.202 G phosphotransferase system
BCDPMDNO_00433 1.5e-47 fruA 2.7.1.202 G phosphotransferase system
BCDPMDNO_00434 1.4e-261 gor 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BCDPMDNO_00435 5.3e-242 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
BCDPMDNO_00437 6.1e-213 iscS2 2.8.1.7 E Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes
BCDPMDNO_00438 7.2e-228 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BCDPMDNO_00439 8.4e-295 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
BCDPMDNO_00440 8e-257 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
BCDPMDNO_00441 1.1e-38 2.3.1.128 K acetyltransferase
BCDPMDNO_00442 6.4e-29 2.3.1.128 K acetyltransferase
BCDPMDNO_00443 4.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
BCDPMDNO_00444 1.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
BCDPMDNO_00445 2.1e-99 ydaF_2 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCDPMDNO_00446 1.3e-37 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCDPMDNO_00447 2.6e-64 WQ51_03320 S cog cog4835
BCDPMDNO_00448 2.9e-31 XK27_08360 S lipid binding
BCDPMDNO_00449 3.4e-109 XK27_08360 T EDD domain protein, DegV family
BCDPMDNO_00450 5.1e-139 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
BCDPMDNO_00451 1.5e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
BCDPMDNO_00452 0.0 yfmR S abc transporter atp-binding protein
BCDPMDNO_00453 6.8e-15 U response to pH
BCDPMDNO_00454 1.4e-136 3.6.1.13, 3.6.1.55 F AdP-ribose pyrophosphatase
BCDPMDNO_00455 2.2e-215 nadD 2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55 H adenylyltransferase
BCDPMDNO_00456 1.8e-256 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
BCDPMDNO_00457 7.9e-70 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
BCDPMDNO_00459 1.9e-77 K DNA-binding transcription factor activity
BCDPMDNO_00460 0.0 lmrA1 V abc transporter atp-binding protein
BCDPMDNO_00461 0.0 lmrA2 V abc transporter atp-binding protein
BCDPMDNO_00462 2.3e-122 sptS 2.7.13.3 T Histidine kinase
BCDPMDNO_00463 4.9e-131 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
BCDPMDNO_00464 9.9e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
BCDPMDNO_00465 5.3e-161 cvfB S Protein conserved in bacteria
BCDPMDNO_00466 7.4e-35 yozE S Belongs to the UPF0346 family
BCDPMDNO_00467 2.8e-122 usp 3.5.1.104, 3.5.1.28 CBM50 S pathogenesis
BCDPMDNO_00468 1.9e-13
BCDPMDNO_00469 3e-151 L Transposase
BCDPMDNO_00470 4.6e-13 L Transposase
BCDPMDNO_00471 1.4e-61 rlpA M LysM domain protein
BCDPMDNO_00472 2.3e-190 phoH T phosphate starvation-inducible protein PhoH
BCDPMDNO_00476 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BCDPMDNO_00477 3.4e-166 K transcriptional regulator (lysR family)
BCDPMDNO_00478 1.4e-186 coiA 3.6.4.12 S Competence protein
BCDPMDNO_00479 0.0 pepF E oligoendopeptidase F
BCDPMDNO_00480 1.4e-127 yrrM 2.1.1.104 S O-Methyltransferase
BCDPMDNO_00481 1.2e-176 prsA 3.1.3.16, 5.2.1.8 O peptidyl-prolyl cis-trans isomerase activity
BCDPMDNO_00482 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BCDPMDNO_00483 4.6e-24 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
BCDPMDNO_00484 1.7e-92 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
BCDPMDNO_00485 5.8e-42 S pathogenesis
BCDPMDNO_00486 5e-123 3.4.17.14, 3.5.1.28 NU amidase activity
BCDPMDNO_00487 5.3e-147 cnhA 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
BCDPMDNO_00488 2.4e-228 mtnE 2.6.1.83 E mutations do not affect methionine salvage in vivo however
BCDPMDNO_00489 1.5e-191 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BCDPMDNO_00490 1.5e-222 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
BCDPMDNO_00491 1.8e-128 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
BCDPMDNO_00492 1.1e-209 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
BCDPMDNO_00493 5.5e-141 yxkH G deacetylase
BCDPMDNO_00494 4e-237 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
BCDPMDNO_00495 2.8e-154 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
BCDPMDNO_00496 7.2e-153 rarD S Transporter
BCDPMDNO_00497 2.2e-15 T peptidase
BCDPMDNO_00498 8.9e-14 coiA 3.6.4.12 S Competence protein
BCDPMDNO_00499 1.7e-102 S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BCDPMDNO_00500 1.9e-46 2.3.1.128, 5.2.1.8 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCDPMDNO_00501 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
BCDPMDNO_00502 3.2e-16 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BCDPMDNO_00503 9e-114 atpB C it plays a direct role in the translocation of protons across the membrane
BCDPMDNO_00504 3.3e-78 atpF C ATP synthase F(0) sector subunit b
BCDPMDNO_00505 3.5e-86 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BCDPMDNO_00506 3.8e-279 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BCDPMDNO_00507 2.5e-158 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BCDPMDNO_00508 2.7e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BCDPMDNO_00509 5.2e-67 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
BCDPMDNO_00510 8.1e-230 ftsW D Belongs to the SEDS family
BCDPMDNO_00511 9.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BCDPMDNO_00512 1.4e-136 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
BCDPMDNO_00513 1.7e-111 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BCDPMDNO_00514 1.9e-161 holB 2.7.7.7 L dna polymerase iii
BCDPMDNO_00515 4e-134 yaaT S stage 0 sporulation protein
BCDPMDNO_00516 9.5e-55 yabA L Involved in initiation control of chromosome replication
BCDPMDNO_00517 2.7e-160 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BCDPMDNO_00518 1.7e-232 amt P Ammonium Transporter
BCDPMDNO_00519 6.6e-54 glnB K Belongs to the P(II) protein family
BCDPMDNO_00520 3.2e-105 mur1 NU mannosyl-glycoprotein
BCDPMDNO_00521 5.8e-149 XK27_04800 S Sucrose-6F-phosphate phosphohydrolase
BCDPMDNO_00522 1.3e-32 nptA P sodium-dependent phosphate transmembrane transporter activity
BCDPMDNO_00523 3.2e-85 nptA P COG1283 Na phosphate symporter
BCDPMDNO_00524 9.8e-219 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
BCDPMDNO_00525 7.4e-55
BCDPMDNO_00526 2.8e-25
BCDPMDNO_00527 7.8e-61
BCDPMDNO_00528 4.8e-176 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
BCDPMDNO_00529 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
BCDPMDNO_00530 4.5e-39 ynzC S UPF0291 protein
BCDPMDNO_00531 2.5e-253 cycA E permease
BCDPMDNO_00532 1.4e-09 uvrX 2.7.7.7 L impB/mucB/samB family
BCDPMDNO_00533 1.5e-25 2.7.1.208, 2.7.1.211 G protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BCDPMDNO_00534 5.8e-71 pts33BCA G pts system
BCDPMDNO_00535 5.8e-95 pts33BCA G pts system
BCDPMDNO_00536 2e-77 2.7.1.199, 2.7.1.211 G PTS glucose transporter subunit IIA
BCDPMDNO_00537 6e-140 ppiA 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BCDPMDNO_00542 1.2e-166 fhuR K transcriptional regulator (lysR family)
BCDPMDNO_00543 1.5e-77 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BCDPMDNO_00544 3.2e-153 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
BCDPMDNO_00545 3.7e-88 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
BCDPMDNO_00546 3.7e-227 pyrP F uracil Permease
BCDPMDNO_00547 1e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
BCDPMDNO_00548 5.5e-211 carA 6.3.5.5 F carbamoyl-phosphate synthetase glutamine chain
BCDPMDNO_00549 0.0 carB 6.3.5.5 F carbamoyl-phosphate synthetase ammonia chain
BCDPMDNO_00550 1.7e-134 J Putative SAM-dependent methyltransferase
BCDPMDNO_00551 7.6e-21 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BCDPMDNO_00552 6.9e-37 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BCDPMDNO_00553 3.8e-43 V permease protein
BCDPMDNO_00554 8.3e-35 V permease protein
BCDPMDNO_00555 3.7e-22 V efflux transmembrane transporter activity
BCDPMDNO_00556 7e-27 ytrF V efflux transmembrane transporter activity
BCDPMDNO_00557 5.6e-78 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BCDPMDNO_00558 3.9e-52 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
BCDPMDNO_00560 0.0 mdlB V abc transporter atp-binding protein
BCDPMDNO_00561 0.0 lmrA V abc transporter atp-binding protein
BCDPMDNO_00562 1.8e-195 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
BCDPMDNO_00563 2.3e-125 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
BCDPMDNO_00564 3.3e-215 2.7.13.3 T signal transduction protein with a C-terminal ATPase domain
BCDPMDNO_00565 1.9e-132 rr02 KT response regulator
BCDPMDNO_00566 3.3e-80 2.7.7.73, 2.7.7.80 H Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
BCDPMDNO_00567 3.6e-128 2.7.7.73, 2.7.7.80 H Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
BCDPMDNO_00568 1.8e-167 V ABC transporter
BCDPMDNO_00569 5.4e-122 sagI S ABC-2 type transporter
BCDPMDNO_00570 6.9e-197 yceA S Belongs to the UPF0176 family
BCDPMDNO_00571 1.9e-29 XK27_00085 K Transcriptional
BCDPMDNO_00572 4.3e-22
BCDPMDNO_00573 2e-143 deoD_1 2.4.2.3 F Phosphorylase superfamily
BCDPMDNO_00574 2.5e-113 S VIT family
BCDPMDNO_00575 7.4e-132 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
BCDPMDNO_00576 6.8e-220 hipO 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
BCDPMDNO_00577 3.4e-17 ald 1.4.1.1 E alanine dehydrogenase activity
BCDPMDNO_00578 2e-43 ald 1.4.1.1 C Belongs to the AlaDH PNT family
BCDPMDNO_00580 3.6e-249 merA 1.16.1.1 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BCDPMDNO_00581 4.6e-105 GBS0088 J protein conserved in bacteria
BCDPMDNO_00582 9.6e-150 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
BCDPMDNO_00583 2.5e-172 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
BCDPMDNO_00584 4.3e-178 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I GHMP kinases N terminal domain
BCDPMDNO_00585 5.2e-192 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
BCDPMDNO_00586 5.6e-253 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BCDPMDNO_00587 1.3e-96 nudF 3.6.1.13 L AdP-ribose pyrophosphatase
BCDPMDNO_00588 2.5e-21
BCDPMDNO_00589 2e-118 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BCDPMDNO_00591 3.5e-07 U protein secretion
BCDPMDNO_00592 5.5e-51 U protein secretion
BCDPMDNO_00593 1.5e-191 dgs 2.4.1.208 GT4 M Glycosyltransferase, group 1 family protein
BCDPMDNO_00594 1.8e-248 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
BCDPMDNO_00595 6.4e-21 XK27_13030
BCDPMDNO_00596 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BCDPMDNO_00597 1.1e-170 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
BCDPMDNO_00598 7.3e-166 S Protein of unknown function (DUF3114)
BCDPMDNO_00599 3.6e-22 S Protein of unknown function (DUF3114)
BCDPMDNO_00600 3.6e-120 yqfA K protein, Hemolysin III
BCDPMDNO_00601 1.6e-233 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
BCDPMDNO_00602 1.7e-218 mvaS 2.3.3.10 I synthase
BCDPMDNO_00603 2.9e-167 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BCDPMDNO_00604 3.4e-91 folA 1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BCDPMDNO_00605 9.7e-22
BCDPMDNO_00606 2e-225 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BCDPMDNO_00607 3e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
BCDPMDNO_00608 3.7e-249 mmuP E amino acid
BCDPMDNO_00609 3.8e-176 mmuM 1.5.1.20, 2.1.1.10 H Homocysteine
BCDPMDNO_00610 1.4e-29 S Domain of unknown function (DUF1912)
BCDPMDNO_00611 4.9e-15 L Helix-hairpin-helix DNA-binding motif class 1
BCDPMDNO_00612 7.1e-102 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
BCDPMDNO_00613 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
BCDPMDNO_00614 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
BCDPMDNO_00615 2.4e-200 ilvE 2.6.1.42 E Aminotransferase
BCDPMDNO_00616 4.8e-16 S Protein of unknown function (DUF2969)
BCDPMDNO_00619 8.4e-205 rpsA 1.17.7.4 J ribosomal protein S1
BCDPMDNO_00622 5.1e-29 S Domain of Unknown Function with PDB structure (DUF3862)
BCDPMDNO_00623 3.9e-31 S Domain of Unknown Function with PDB structure (DUF3862)
BCDPMDNO_00624 4.4e-68 M Pfam SNARE associated Golgi protein
BCDPMDNO_00625 5.8e-233 murN 2.3.2.10, 2.3.2.16 V FemAB family
BCDPMDNO_00626 7.8e-08 S oxidoreductase
BCDPMDNO_00627 7e-26 2.7.7.15 S inositol 2-dehydrogenase activity
BCDPMDNO_00628 1.4e-50 yvaA 1.1.1.371 S inositol 2-dehydrogenase activity
BCDPMDNO_00629 7.4e-49 XK27_09445 S Domain of unknown function (DUF1827)
BCDPMDNO_00630 1.8e-86 mutT 3.5.4.33, 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
BCDPMDNO_00631 0.0 clpE O Belongs to the ClpA ClpB family
BCDPMDNO_00632 1.6e-182 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BCDPMDNO_00633 1.3e-34 ykuJ S protein conserved in bacteria
BCDPMDNO_00634 7.5e-118 WQ51_01820 P Binding-protein-dependent transport system inner membrane component
BCDPMDNO_00635 1.1e-130 glnQ 3.6.3.21 E abc transporter atp-binding protein
BCDPMDNO_00636 4.1e-78 feoA P FeoA domain protein
BCDPMDNO_00637 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
BCDPMDNO_00638 6.6e-08
BCDPMDNO_00639 1.5e-35 yugF I carboxylic ester hydrolase activity
BCDPMDNO_00640 7.5e-23 I Alpha/beta hydrolase family
BCDPMDNO_00641 1e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BCDPMDNO_00642 2e-149 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BCDPMDNO_00643 0.0 pbp2b 3.4.16.4 M penicillin-binding protein
BCDPMDNO_00644 2.2e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BCDPMDNO_00645 5.8e-64 licT K transcriptional antiterminator
BCDPMDNO_00646 3.4e-52 licT K transcriptional antiterminator
BCDPMDNO_00647 5.9e-88 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BCDPMDNO_00648 1.1e-63 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
BCDPMDNO_00649 1.2e-163 era M An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BCDPMDNO_00650 5.5e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
BCDPMDNO_00651 2.3e-102 coaE 2.7.1.24, 3.2.2.23, 4.2.99.18 GH23 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BCDPMDNO_00652 2.9e-221 mdtG EGP Major facilitator Superfamily
BCDPMDNO_00653 2e-33 secG U Preprotein translocase subunit SecG
BCDPMDNO_00654 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
BCDPMDNO_00655 1.1e-80 smpB O the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
BCDPMDNO_00656 3.7e-276 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BCDPMDNO_00657 1.7e-63 yugI 5.3.1.9 J RNA binding protein, contains ribosomal protein S1 domain
BCDPMDNO_00658 4.2e-211 pepQ 3.4.13.9 E Belongs to the peptidase M24B family
BCDPMDNO_00659 4.4e-183 ccpA K Catabolite control protein A
BCDPMDNO_00660 4e-27 yyaQ S YjbR
BCDPMDNO_00661 7.4e-146 yyaQ S YjbR
BCDPMDNO_00662 1.1e-206 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
BCDPMDNO_00663 1.3e-78 yueI S Protein of unknown function (DUF1694)
BCDPMDNO_00664 1.3e-246 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
BCDPMDNO_00665 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
BCDPMDNO_00666 5.8e-219 ywbD 2.1.1.191 J Methyltransferase
BCDPMDNO_00667 2.9e-122 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
BCDPMDNO_00668 3.7e-162 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BCDPMDNO_00669 4.5e-202 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
BCDPMDNO_00670 4.5e-219 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BCDPMDNO_00671 1.1e-206 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
BCDPMDNO_00672 3.2e-53 yheA S Belongs to the UPF0342 family
BCDPMDNO_00673 1.1e-172 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
BCDPMDNO_00674 1.7e-235 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
BCDPMDNO_00675 1.7e-87 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BCDPMDNO_00676 2.3e-153 pheA 4.2.1.51 E Prephenate dehydratase
BCDPMDNO_00677 1.1e-59 msrR K Transcriptional regulator
BCDPMDNO_00678 7.7e-177 msrR K Transcriptional regulator
BCDPMDNO_00679 3.2e-159 ydiA P C4-dicarboxylate transporter malic acid transport
BCDPMDNO_00680 4.8e-204 I acyl-CoA dehydrogenase
BCDPMDNO_00681 7.7e-97 mip S hydroperoxide reductase activity
BCDPMDNO_00682 5.9e-255 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BCDPMDNO_00683 1.6e-84
BCDPMDNO_00684 1e-31 K Cro/C1-type HTH DNA-binding domain
BCDPMDNO_00685 7.8e-50 dam 2.1.1.72 L D12 class N6 adenine-specific DNA methyltransferase
BCDPMDNO_00686 2.4e-28 estA E GDSL-like Lipase/Acylhydrolase
BCDPMDNO_00687 1.2e-93
BCDPMDNO_00688 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
BCDPMDNO_00689 3.2e-172 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BCDPMDNO_00690 9e-53 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BCDPMDNO_00691 6.1e-183 S CRISPR-associated protein Csn2 subfamily St
BCDPMDNO_00692 1.7e-145 ycgQ S TIGR03943 family
BCDPMDNO_00693 6.4e-157 XK27_03015 S permease
BCDPMDNO_00695 0.0 yhgF K Transcriptional accessory protein
BCDPMDNO_00696 4.9e-86 ydcK S Belongs to the SprT family
BCDPMDNO_00697 2.9e-41 pspC KT PspC domain
BCDPMDNO_00698 3.1e-170 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
BCDPMDNO_00699 2e-146 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BCDPMDNO_00701 1e-67 ytxH S General stress protein
BCDPMDNO_00703 3e-178 yegQ O Peptidase U32
BCDPMDNO_00704 3.4e-252 yegQ O Peptidase U32
BCDPMDNO_00705 5.8e-89 bioY S biotin synthase
BCDPMDNO_00707 1.8e-33 XK27_12190 S protein conserved in bacteria
BCDPMDNO_00708 2.7e-236 mntH P H( )-stimulated, divalent metal cation uptake system
BCDPMDNO_00709 2.4e-10
BCDPMDNO_00710 7e-68 nudG 3.6.1.55, 3.6.1.65 L Belongs to the Nudix hydrolase family
BCDPMDNO_00711 1.5e-100 L helicase
BCDPMDNO_00712 2.1e-39
BCDPMDNO_00713 6.3e-38
BCDPMDNO_00718 7.8e-19 pvuIIC K Helix-turn-helix domain
BCDPMDNO_00719 1.3e-25
BCDPMDNO_00720 9.4e-183 L Transposase and inactivated derivatives IS30 family
BCDPMDNO_00721 3.7e-287 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
BCDPMDNO_00722 3.4e-22 M LysM domain
BCDPMDNO_00723 3.5e-52 M LysM domain
BCDPMDNO_00724 3.1e-61 M LysM domain
BCDPMDNO_00725 3.4e-16
BCDPMDNO_00726 2.3e-175 S hydrolase
BCDPMDNO_00727 5.1e-116 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase
BCDPMDNO_00728 7.9e-82 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BCDPMDNO_00729 1.6e-145 XK27_00880 3.5.1.28 M Glycosyl hydrolase, family 25
BCDPMDNO_00730 2.7e-27 P Hemerythrin HHE cation binding domain protein
BCDPMDNO_00731 6.1e-114 1.14.14.5 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BCDPMDNO_00732 2.3e-10 MA20_36090 S Protein of unknown function (DUF2974)
BCDPMDNO_00733 2.7e-37 MA20_36090 S Protein of unknown function (DUF2974)
BCDPMDNO_00734 1.6e-132 sdh 1.1.1.276, 1.1.1.313, 1.1.1.381 S Belongs to the short-chain dehydrogenases reductases (SDR) family
BCDPMDNO_00735 0.0 hsdR 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
BCDPMDNO_00736 3.2e-242 S AAA domain, putative AbiEii toxin, Type IV TA system
BCDPMDNO_00738 5.1e-226 hsdS 3.1.21.3 V type I restriction modification DNA specificity domain protein
BCDPMDNO_00739 0.0 S KAP family P-loop domain
BCDPMDNO_00740 6.1e-137 S Protein conserved in bacteria
BCDPMDNO_00741 6.6e-306 hsdM 2.1.1.72 V type I restriction-modification system
BCDPMDNO_00742 3e-12 S double-stranded DNA endodeoxyribonuclease activity
BCDPMDNO_00743 4.5e-26 S PD-(D/E)XK nuclease family transposase
BCDPMDNO_00744 1.8e-176 spd F DNA RNA non-specific endonuclease
BCDPMDNO_00745 3.4e-92 lemA S LemA family
BCDPMDNO_00746 5.4e-132 htpX O Belongs to the peptidase M48B family
BCDPMDNO_00747 1.2e-74 S Psort location CytoplasmicMembrane, score
BCDPMDNO_00748 6.2e-56 S Domain of unknown function (DUF4430)
BCDPMDNO_00749 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
BCDPMDNO_00750 7.1e-184 holA 2.7.7.7 L DNA polymerase III delta subunit
BCDPMDNO_00751 8.5e-113 sodA 1.15.1.1 C radicals which are normally produced within the cells and which are toxic to biological systems
BCDPMDNO_00752 1.4e-190 3.5.2.6 V D-alanyl-D-alanine carboxypeptidase
BCDPMDNO_00753 2e-115 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
BCDPMDNO_00754 3.5e-91 dps P Belongs to the Dps family
BCDPMDNO_00755 1.1e-80 perR P Belongs to the Fur family
BCDPMDNO_00756 8.4e-28 yqgQ S protein conserved in bacteria
BCDPMDNO_00757 2.4e-178 glk 2.7.1.2 G Glucokinase
BCDPMDNO_00758 0.0 typA T GTP-binding protein TypA
BCDPMDNO_00760 1.6e-252 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BCDPMDNO_00761 1e-201 murG 2.4.1.227 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BCDPMDNO_00762 2.2e-178 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
BCDPMDNO_00763 6.8e-251 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
BCDPMDNO_00764 5.4e-237 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BCDPMDNO_00765 2.7e-123 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BCDPMDNO_00766 2.3e-96 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
BCDPMDNO_00767 8.8e-35 yggT D integral membrane protein
BCDPMDNO_00768 8e-143 ylmH T S4 RNA-binding domain
BCDPMDNO_00769 7.9e-136 divIVA D Cell division protein DivIVA
BCDPMDNO_00770 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BCDPMDNO_00771 1.2e-17
BCDPMDNO_00772 8.4e-10
BCDPMDNO_00773 1.7e-227 mntH P Mn2 and Fe2 transporters of the NRAMP family
BCDPMDNO_00774 2e-45 rpmE2 J 50S ribosomal protein L31
BCDPMDNO_00775 1.5e-177 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
BCDPMDNO_00776 1.5e-177 nrnA 3.1.13.3, 3.1.3.7 S domain protein
BCDPMDNO_00777 2e-154 gst O Glutathione S-transferase
BCDPMDNO_00778 2.6e-19 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BCDPMDNO_00779 2.3e-159 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BCDPMDNO_00780 4.5e-111 tdk 2.7.1.21 F thymidine kinase
BCDPMDNO_00781 3e-193 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BCDPMDNO_00782 4e-153 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
BCDPMDNO_00783 1.1e-107 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
BCDPMDNO_00784 1.8e-234 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BCDPMDNO_00785 1.9e-178 ndpA S 37-kD nucleoid-associated bacterial protein
BCDPMDNO_00786 2.4e-107 pvaA M lytic transglycosylase activity
BCDPMDNO_00787 0.0 yfiB1 V abc transporter atp-binding protein
BCDPMDNO_00788 0.0 XK27_10035 V abc transporter atp-binding protein
BCDPMDNO_00789 1.7e-09 S D-Ala-teichoic acid biosynthesis protein
BCDPMDNO_00790 4.9e-298 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BCDPMDNO_00791 4.6e-238 dltB M Membrane protein involved in D-alanine export
BCDPMDNO_00792 1.7e-35 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BCDPMDNO_00793 4.7e-230 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BCDPMDNO_00794 6.3e-34 L Integrase core domain protein
BCDPMDNO_00795 3.6e-31 L Integrase core domain protein
BCDPMDNO_00796 9.3e-53 L transposition
BCDPMDNO_00797 3.4e-19 L transposase activity
BCDPMDNO_00798 0.0 3.6.3.8 P cation transport ATPase
BCDPMDNO_00799 0.0 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH component I
BCDPMDNO_00801 6.6e-12
BCDPMDNO_00803 1.6e-282 S DNA primase
BCDPMDNO_00804 1.2e-141 KL Phage plasmid primase P4 family
BCDPMDNO_00805 3.1e-22
BCDPMDNO_00806 1.2e-14
BCDPMDNO_00810 1.7e-17 K Cro/C1-type HTH DNA-binding domain
BCDPMDNO_00812 6.9e-220 sip L Belongs to the 'phage' integrase family
BCDPMDNO_00814 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BCDPMDNO_00815 7.3e-166 metF 1.5.1.20 C reductase
BCDPMDNO_00816 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
BCDPMDNO_00817 1.4e-93 panT S ECF transporter, substrate-specific component
BCDPMDNO_00818 4.8e-94 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BCDPMDNO_00819 1.2e-120 coaB 4.1.1.36, 6.3.2.5 H Phosphopantothenate-cysteine ligase
BCDPMDNO_00820 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
BCDPMDNO_00821 1.1e-84 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
BCDPMDNO_00822 4.3e-41 T PhoQ Sensor
BCDPMDNO_00823 1.7e-43 T PhoQ Sensor
BCDPMDNO_00824 1.9e-127 T PhoQ Sensor
BCDPMDNO_00825 1.2e-165 L integrase core domain
BCDPMDNO_00826 3.9e-122 L Transposase
BCDPMDNO_00827 2.1e-30 rpsT J rRNA binding
BCDPMDNO_00828 1.1e-172 coaA 2.7.1.33 F Pantothenic acid kinase
BCDPMDNO_00829 2.3e-107 rsmC 2.1.1.172 J Methyltransferase small domain protein
BCDPMDNO_00830 6.9e-26 pdp 2.4.2.2, 2.4.2.4 F phosphorylase activity
BCDPMDNO_00831 1e-23 pdp 2.4.2.2, 2.4.2.4 F phosphorylase activity
BCDPMDNO_00832 4.5e-59 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
BCDPMDNO_00833 8.6e-65 pdp 2.4.2.2, 2.4.2.4 F phosphorylase activity
BCDPMDNO_00834 6e-21 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BCDPMDNO_00835 4.8e-64 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BCDPMDNO_00836 4.7e-57 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
BCDPMDNO_00837 7.3e-192 tcsA S ABC-type transport system, periplasmic component surface lipoprotein
BCDPMDNO_00838 3.7e-282 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
BCDPMDNO_00839 3e-190 yufP S Belongs to the binding-protein-dependent transport system permease family
BCDPMDNO_00840 4.8e-171 yufQ S Belongs to the binding-protein-dependent transport system permease family
BCDPMDNO_00841 8.9e-121 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
BCDPMDNO_00842 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
BCDPMDNO_00843 6.8e-81 ypmB S Protein conserved in bacteria
BCDPMDNO_00844 1.9e-217 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
BCDPMDNO_00845 4.9e-262 asnS 6.1.1.22 J Catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
BCDPMDNO_00847 8.1e-08
BCDPMDNO_00848 3e-63 tdcF 3.5.99.10 J endoribonuclease L-PSP
BCDPMDNO_00849 4e-124 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
BCDPMDNO_00850 2e-82 queD 4.1.2.50, 4.2.3.12 H synthase
BCDPMDNO_00851 2.9e-136 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
BCDPMDNO_00852 6.5e-95 queF 1.7.1.13 S Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily
BCDPMDNO_00853 7.7e-20 D nuclear chromosome segregation
BCDPMDNO_00854 7.4e-138 yejC S cyclic nucleotide-binding protein
BCDPMDNO_00855 2.7e-163 rapZ S Displays ATPase and GTPase activities
BCDPMDNO_00856 9.6e-183 ybhK S Required for morphogenesis under gluconeogenic growth conditions
BCDPMDNO_00857 8.7e-162 whiA K May be required for sporulation
BCDPMDNO_00858 2.8e-90 pepD E Dipeptidase
BCDPMDNO_00859 5.8e-41 pepD E dipeptidase activity
BCDPMDNO_00860 7.4e-32 cspD K Cold shock protein domain
BCDPMDNO_00861 9.4e-43 K Cold-Shock Protein
BCDPMDNO_00862 2.3e-223 L Transposase, Mutator family
BCDPMDNO_00863 0.0 copB 3.6.3.4 P P-type ATPase
BCDPMDNO_00864 1.2e-88 L Transposase
BCDPMDNO_00865 4.6e-88 L Transposase
BCDPMDNO_00866 1.4e-195 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
BCDPMDNO_00867 2.3e-170 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
BCDPMDNO_00868 2e-219 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
BCDPMDNO_00869 5.2e-62 cysE 2.3.1.30 E serine acetyltransferase
BCDPMDNO_00870 2.6e-222 L Transposase
BCDPMDNO_00871 1.6e-57 hsdS 2.1.1.72, 3.1.21.3 V type I restriction modification DNA specificity domain
BCDPMDNO_00872 1.7e-63 hsdM 2.1.1.72 V type I restriction-modification system
BCDPMDNO_00873 1.5e-33 hsdM 2.1.1.72 V type I restriction-modification system
BCDPMDNO_00874 2.2e-157 glcU U Glucose uptake
BCDPMDNO_00875 1.1e-08 mycA 4.2.1.53 S Myosin-crossreactive antigen
BCDPMDNO_00876 2.9e-78 hsdM 2.1.1.72 V HsdM N-terminal domain
BCDPMDNO_00877 6.2e-109 XK27_10720 D peptidase activity
BCDPMDNO_00878 2.3e-295 adcA P Belongs to the bacterial solute-binding protein 9 family
BCDPMDNO_00879 1.7e-08
BCDPMDNO_00881 1.4e-109 L Transposase
BCDPMDNO_00882 2.5e-46
BCDPMDNO_00883 7.1e-17
BCDPMDNO_00884 1e-171 yeiH S Membrane
BCDPMDNO_00885 7.1e-114 mur1 NU muramidase
BCDPMDNO_00886 1.3e-97 L transposition
BCDPMDNO_00887 2.6e-166 cpsY K Transcriptional regulator
BCDPMDNO_00888 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
BCDPMDNO_00889 5.6e-58 phnA P Alkylphosphonate utilization operon protein PhnA
BCDPMDNO_00890 2.4e-105 artQ P ABC transporter (Permease
BCDPMDNO_00891 1.8e-113 glnQ 3.6.3.21 E abc transporter atp-binding protein
BCDPMDNO_00892 8.4e-159 aatB ET ABC transporter substrate-binding protein
BCDPMDNO_00893 5.8e-149 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BCDPMDNO_00894 2.1e-07
BCDPMDNO_00895 7.8e-25
BCDPMDNO_00896 4.6e-63 adhP 1.1.1.1 C alcohol dehydrogenase
BCDPMDNO_00897 1.8e-15 adhP 1.1.1.1 P alcohol dehydrogenase
BCDPMDNO_00898 1.5e-80 adhP 1.1.1.1 C alcohol dehydrogenase
BCDPMDNO_00899 2.7e-22
BCDPMDNO_00900 0.0 res_1 3.1.21.5 S Type III restriction
BCDPMDNO_00901 0.0 sthIM 2.1.1.72 L Adenine specific DNA methylase Mod
BCDPMDNO_00902 3e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
BCDPMDNO_00903 3.5e-126 gntR1 K transcriptional
BCDPMDNO_00904 1.1e-53 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
BCDPMDNO_00905 5.9e-275 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BCDPMDNO_00906 3.1e-87 niaX
BCDPMDNO_00907 6e-91 niaR S small molecule binding protein (contains 3H domain)
BCDPMDNO_00908 5.6e-129 K DNA-binding helix-turn-helix protein
BCDPMDNO_00909 1.1e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BCDPMDNO_00910 2.4e-136 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BCDPMDNO_00911 3.7e-168 GK ROK family
BCDPMDNO_00912 2.4e-158 dprA LU DNA protecting protein DprA
BCDPMDNO_00913 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BCDPMDNO_00914 6.7e-153 S TraX protein
BCDPMDNO_00915 2.2e-122 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
BCDPMDNO_00916 8.2e-252 T PhoQ Sensor
BCDPMDNO_00917 2.5e-258 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
BCDPMDNO_00918 2e-154 XK27_05470 E Methionine synthase
BCDPMDNO_00919 1.7e-75 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
BCDPMDNO_00920 7.3e-46 pspE P Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BCDPMDNO_00921 2.9e-92 ET Bacterial periplasmic substrate-binding proteins
BCDPMDNO_00922 6.6e-54 IQ Acetoin reductase
BCDPMDNO_00923 3.9e-19 IQ Acetoin reductase
BCDPMDNO_00924 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
BCDPMDNO_00928 1.1e-53 K peptidyl-tyrosine sulfation
BCDPMDNO_00929 2.6e-155 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
BCDPMDNO_00932 1.3e-212 pqqE C radical SAM domain protein
BCDPMDNO_00933 3.9e-136 speB 3.5.3.11 E hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
BCDPMDNO_00934 6.6e-61 EGP Major facilitator Superfamily
BCDPMDNO_00935 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
BCDPMDNO_00936 3e-133 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
BCDPMDNO_00937 1.9e-13
BCDPMDNO_00938 6.7e-139 L Transposase
BCDPMDNO_00939 4.6e-13 L Transposase
BCDPMDNO_00940 5.9e-116 V ABC transporter (Permease
BCDPMDNO_00941 3.5e-113 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
BCDPMDNO_00942 1.6e-10
BCDPMDNO_00943 6.9e-98 K Transcriptional regulator, TetR family
BCDPMDNO_00944 2.3e-159 czcD P cation diffusion facilitator family transporter
BCDPMDNO_00945 1.1e-19 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
BCDPMDNO_00946 1.5e-52 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
BCDPMDNO_00947 7.5e-135 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
BCDPMDNO_00948 1.6e-24 adhB 1.1.1.1, 1.1.1.14 E Dehydrogenase
BCDPMDNO_00949 2.3e-162 adhB 1.1.1.1, 1.1.1.14 E Dehydrogenase
BCDPMDNO_00950 6e-08 S Hydrolases of the alpha beta superfamily
BCDPMDNO_00951 7.9e-17 S Alpha/beta hydrolase of unknown function (DUF915)
BCDPMDNO_00952 1.2e-79 S Alpha/beta hydrolase of unknown function (DUF915)
BCDPMDNO_00955 6.9e-144 2.4.2.3 F Phosphorylase superfamily
BCDPMDNO_00956 9.8e-120 gph 3.1.3.18 S HAD hydrolase, family IA, variant 1
BCDPMDNO_00957 3.6e-14 yclQ P ABC-type enterochelin transport system, periplasmic component
BCDPMDNO_00958 1.2e-18 yclQ P ABC-type enterochelin transport system, periplasmic component
BCDPMDNO_00959 4.2e-75 dinF V Mate efflux family protein
BCDPMDNO_00961 3.9e-309 FbpA K RNA-binding protein homologous to eukaryotic snRNP
BCDPMDNO_00963 9.7e-89 S TraX protein
BCDPMDNO_00964 1.3e-96 thiJ 2.7.11.1, 3.5.1.124 S DJ-1 family
BCDPMDNO_00965 1.5e-149 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
BCDPMDNO_00966 4.2e-175 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
BCDPMDNO_00967 2.8e-111 cas1 L maintenance of DNA repeat elements
BCDPMDNO_00968 5.1e-50 cas1 L maintenance of DNA repeat elements
BCDPMDNO_00969 6.9e-116 csm3 L RAMP superfamily
BCDPMDNO_00970 4e-167 csm4 L CRISPR-associated RAMP protein, Csm4 family
BCDPMDNO_00971 4.4e-205 csm5 L CRISPR-associated RAMP protein, Csm5 family
BCDPMDNO_00972 2.1e-14 csm6 S Psort location Cytoplasmic, score
BCDPMDNO_00973 1.3e-72 csm6 S Psort location Cytoplasmic, score
BCDPMDNO_00974 3.8e-125 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
BCDPMDNO_00975 5.7e-112 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BCDPMDNO_00977 9.3e-55 nylA 3.5.1.4 J Belongs to the amidase family
BCDPMDNO_00978 6.5e-268 dtpT E transporter
BCDPMDNO_00979 6.3e-40 L Transposase and inactivated derivatives IS30 family
BCDPMDNO_00980 2.5e-129 L Transposase and inactivated derivatives IS30 family
BCDPMDNO_00981 2.2e-106 nylA 3.5.1.4 J Belongs to the amidase family
BCDPMDNO_00982 4.6e-73 yckB ET Belongs to the bacterial solute-binding protein 3 family
BCDPMDNO_00983 3.2e-59 artJ_1 ET Belongs to the bacterial solute-binding protein 3 family
BCDPMDNO_00984 3.3e-68 yecS P ABC transporter (Permease
BCDPMDNO_00985 9.2e-22 yecS P amino acid transport
BCDPMDNO_00987 1.5e-280 sasH 3.1.3.5, 3.6.1.45 F Belongs to the 5'-nucleotidase family
BCDPMDNO_00988 1.9e-38 3.1.3.6, 3.1.4.16 F nucleotide catabolic process
BCDPMDNO_00989 5.9e-103 yfiF3 K sequence-specific DNA binding
BCDPMDNO_00990 1e-22 bglC K Transcriptional regulator
BCDPMDNO_00991 1.6e-247 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BCDPMDNO_00992 4e-240 agcS E (Alanine) symporter
BCDPMDNO_00993 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
BCDPMDNO_00994 3.5e-241 metY 2.5.1.49 E o-acetylhomoserine
BCDPMDNO_00995 1.8e-59 Q phosphatase activity
BCDPMDNO_00996 9.3e-62 S haloacid dehalogenase-like hydrolase
BCDPMDNO_00997 3.5e-88 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BCDPMDNO_00998 1.1e-110 hsdS2 2.1.1.72 V Type I restriction modification DNA specificity domain
BCDPMDNO_00999 9e-213 XK27_04775 S hemerythrin HHE cation binding domain
BCDPMDNO_01000 4.2e-150 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BCDPMDNO_01001 1.7e-173 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
BCDPMDNO_01002 4.2e-71 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
BCDPMDNO_01003 2.3e-44 yktA S Belongs to the UPF0223 family
BCDPMDNO_01004 6.5e-142 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
BCDPMDNO_01005 1.5e-255 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
BCDPMDNO_01006 5.6e-158 pstS P phosphate
BCDPMDNO_01007 2.5e-156 pstC P probably responsible for the translocation of the substrate across the membrane
BCDPMDNO_01008 1.2e-155 pstA P phosphate transport system permease
BCDPMDNO_01009 1e-150 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BCDPMDNO_01010 1.7e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BCDPMDNO_01011 2.4e-113 phoU P Plays a role in the regulation of phosphate uptake
BCDPMDNO_01012 0.0 pepN 3.4.11.2 E aminopeptidase
BCDPMDNO_01013 7e-195 xerS D Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division
BCDPMDNO_01015 1.3e-187 lplA 6.3.1.20 H Lipoate-protein ligase
BCDPMDNO_01016 1.2e-07
BCDPMDNO_01017 3.2e-08
BCDPMDNO_01018 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
BCDPMDNO_01019 4.1e-302 malQ 2.4.1.25 GH77 G 4-alpha-glucanotransferase
BCDPMDNO_01020 8.1e-177 malR K Transcriptional regulator
BCDPMDNO_01021 3.2e-17 malX G ABC transporter
BCDPMDNO_01022 3.8e-12 malX G maltose binding
BCDPMDNO_01023 2.3e-27 malX G maltose binding
BCDPMDNO_01024 2.6e-53 malF P ABC transporter (Permease
BCDPMDNO_01025 1.3e-46 malF P ABC transporter (Permease
BCDPMDNO_01026 4.6e-25 tatA U protein secretion
BCDPMDNO_01027 2e-121 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BCDPMDNO_01028 2.9e-304 ywbL P COG0672 High-affinity Fe2 Pb2 permease
BCDPMDNO_01029 1.5e-233 ycdB P peroxidase
BCDPMDNO_01030 4.6e-152 ycdO P periplasmic lipoprotein involved in iron transport
BCDPMDNO_01031 2.6e-178 fatB P ABC-type enterochelin transport system, periplasmic component
BCDPMDNO_01032 6.8e-136 yclP 3.6.3.34 P abc transporter atp-binding protein
BCDPMDNO_01033 1.5e-167 fatC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BCDPMDNO_01034 1.8e-165 yclN P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BCDPMDNO_01035 5.5e-36 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
BCDPMDNO_01036 3.1e-223 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
BCDPMDNO_01037 4.1e-53 L Transposase
BCDPMDNO_01038 3.4e-149 L Transposase
BCDPMDNO_01039 1.6e-25
BCDPMDNO_01040 1.1e-26 fic D Fic/DOC family
BCDPMDNO_01041 9.4e-183 L Transposase and inactivated derivatives IS30 family
BCDPMDNO_01043 3.2e-19 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BCDPMDNO_01044 2e-103 L nUDIX hydrolase
BCDPMDNO_01045 3.2e-172 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BCDPMDNO_01046 6.7e-156 K Transcriptional activator, Rgg GadR MutR family
BCDPMDNO_01047 4.6e-238 L Transposase
BCDPMDNO_01048 3.8e-69 3.2.1.17 M lysozyme activity
BCDPMDNO_01049 2.8e-19 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
BCDPMDNO_01050 0.0 lpdA 1.8.1.4 C Dehydrogenase
BCDPMDNO_01051 2.1e-199 acoC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
BCDPMDNO_01052 3.7e-182 acoB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
BCDPMDNO_01053 4.6e-185 acoA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
BCDPMDNO_01054 4.6e-38 P membrane protein (DUF2207)
BCDPMDNO_01055 9.7e-65 S the current gene model (or a revised gene model) may contain a frame shift
BCDPMDNO_01056 2.2e-235 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
BCDPMDNO_01057 2.9e-127 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BCDPMDNO_01058 8.6e-218 yeaB K Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BCDPMDNO_01059 2.4e-23 dacA1 3.4.16.4 M Belongs to the peptidase S11 family
BCDPMDNO_01060 1.5e-177 3.4.16.4 M Belongs to the peptidase S11 family
BCDPMDNO_01061 1.3e-159 rssA S Phospholipase, patatin family
BCDPMDNO_01062 4.6e-85 estA E GDSL-like protein
BCDPMDNO_01063 5.2e-295 S unusual protein kinase
BCDPMDNO_01064 1.3e-39 S granule-associated protein
BCDPMDNO_01065 1.1e-36 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
BCDPMDNO_01066 3.8e-43 bglH 3.2.1.86 GT1 G beta-glucosidase activity
BCDPMDNO_01067 5.1e-101 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
BCDPMDNO_01068 4.1e-29 bglH 3.2.1.86 GT1 G beta-glucosidase activity
BCDPMDNO_01069 7.7e-200 S hmm pf01594
BCDPMDNO_01070 1.4e-87 G Belongs to the phosphoglycerate mutase family
BCDPMDNO_01071 1.9e-68 supH 3.1.3.102, 3.1.3.104 Q phosphatase activity
BCDPMDNO_01072 1.1e-220 L Transposase
BCDPMDNO_01073 1.6e-58 waaB GT4 M Glycosyl transferases group 1
BCDPMDNO_01074 2.3e-67 tnp L DDE domain
BCDPMDNO_01075 3.2e-08 tnp L DDE domain
BCDPMDNO_01076 5.6e-90 V VanZ like family
BCDPMDNO_01077 4e-105 cps2J S Polysaccharide biosynthesis protein
BCDPMDNO_01078 2e-52 yxaB GM Polysaccharide pyruvyl transferase
BCDPMDNO_01079 2.2e-35 S Core-2 I-Branching enzyme
BCDPMDNO_01080 1.6e-32 S EpsG family
BCDPMDNO_01081 2.3e-59 S Glycosyltransferase like family 2
BCDPMDNO_01082 9e-33 epsH S Hexapeptide repeat of succinyl-transferase
BCDPMDNO_01083 2.3e-63 2.4.1.21 GT4,GT5 G Glycosyl transferase 4-like domain
BCDPMDNO_01084 3.8e-83 M Glycosyl transferase 4-like
BCDPMDNO_01086 2.7e-59 rfbP 2.7.8.6 M Bacterial sugar transferase
BCDPMDNO_01087 8.6e-115 cpsD D COG0489 ATPases involved in chromosome partitioning
BCDPMDNO_01088 4e-98 cps4C M biosynthesis protein
BCDPMDNO_01089 1.9e-135 cpsB 3.1.3.48 GM Capsular polysaccharide biosynthesis protein
BCDPMDNO_01090 1.8e-238 cps4A K Cell envelope-like function transcriptional attenuator common domain protein
BCDPMDNO_01091 9e-130 deoD 2.4.2.1, 2.4.2.28 F purine nucleoside phosphorylase
BCDPMDNO_01092 1.3e-115 yfeJ 6.3.5.2 F glutamine amidotransferase
BCDPMDNO_01093 5.4e-63 clcA_2 P chloride channel
BCDPMDNO_01094 1.2e-149 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
BCDPMDNO_01095 5.2e-67 S Protein of unknown function (DUF1697)
BCDPMDNO_01096 3.2e-236 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
BCDPMDNO_01097 5e-122 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BCDPMDNO_01098 1.7e-32 V Glucan-binding protein C
BCDPMDNO_01099 3.4e-111 ung2 3.2.2.27 L Uracil-DNA glycosylase
BCDPMDNO_01100 2.4e-275 pepV 3.5.1.18 E Dipeptidase
BCDPMDNO_01101 6.4e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
BCDPMDNO_01102 6.9e-86 XK27_03610 K Gnat family
BCDPMDNO_01103 1.6e-24 L Transposase
BCDPMDNO_01104 5.8e-42 L Transposase
BCDPMDNO_01105 1.5e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BCDPMDNO_01106 2.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
BCDPMDNO_01107 3.7e-88 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BCDPMDNO_01108 1.1e-121 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
BCDPMDNO_01109 8.2e-18 M LysM domain
BCDPMDNO_01110 2.9e-90 ebsA S Family of unknown function (DUF5322)
BCDPMDNO_01111 3e-234 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
BCDPMDNO_01112 1.2e-97 lepB 3.4.21.89 U Belongs to the peptidase S26 family
BCDPMDNO_01113 4.9e-224 G COG0457 FOG TPR repeat
BCDPMDNO_01114 6.2e-176 yubA S permease
BCDPMDNO_01115 3.5e-93 mutX 3.6.1.55 F NTP pyrophosphohydrolases including oxidative damage repair enzymes
BCDPMDNO_01116 3.6e-163 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
BCDPMDNO_01117 3.2e-124 ftsE D cell division ATP-binding protein FtsE
BCDPMDNO_01118 7.4e-183 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BCDPMDNO_01119 6.1e-202 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BCDPMDNO_01120 4.3e-180 yjjH S Calcineurin-like phosphoesterase
BCDPMDNO_01121 6.7e-136 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
BCDPMDNO_01122 0.0 pacL 3.6.3.8 P cation transport ATPase
BCDPMDNO_01123 2.6e-67 ywiB S Domain of unknown function (DUF1934)
BCDPMDNO_01124 1.7e-51 XK27_00115 2.3.1.128 K acetyltransferase
BCDPMDNO_01125 9.2e-147 yidA S hydrolases of the HAD superfamily
BCDPMDNO_01126 2e-230 murM 2.3.2.10, 2.3.2.16 V protein involved in methicillin resistance
BCDPMDNO_01127 2.1e-154 vicX 3.1.26.11 S Metal-dependent hydrolases of the beta-lactamase superfamily I
BCDPMDNO_01128 3.9e-235 vicK 2.7.13.3 T Histidine kinase
BCDPMDNO_01129 3.8e-128 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
BCDPMDNO_01130 4.6e-140 glnQ 3.6.3.21 E abc transporter atp-binding protein
BCDPMDNO_01131 3.1e-150 peb1A ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
BCDPMDNO_01132 2.7e-118 gltJ P ABC transporter (Permease
BCDPMDNO_01133 1.7e-111 tcyB_2 P ABC transporter (permease)
BCDPMDNO_01134 2e-142 endA F DNA RNA non-specific endonuclease
BCDPMDNO_01135 1.6e-25 epuA S DNA-directed RNA polymerase subunit beta
BCDPMDNO_01136 1.7e-232 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BCDPMDNO_01138 2.3e-195 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
BCDPMDNO_01139 7e-27 G Domain of unknown function (DUF4832)
BCDPMDNO_01140 1.3e-202 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BCDPMDNO_01141 1.6e-174 birA 6.3.4.15 HK Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
BCDPMDNO_01142 3.2e-295 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BCDPMDNO_01143 2.1e-88 ytsP 1.8.4.14 T GAF domain-containing protein
BCDPMDNO_01144 6.4e-165 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BCDPMDNO_01145 2.1e-19 WQ51_02665 S Protein of unknown function (DUF3042)
BCDPMDNO_01148 8.5e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
BCDPMDNO_01149 1.4e-218 XK27_05110 P chloride
BCDPMDNO_01150 8.7e-41 pheA 1.3.1.12, 2.3.1.79, 4.2.1.51, 5.4.99.5 E Chorismate mutase
BCDPMDNO_01151 9.8e-283 clcA P Chloride transporter, ClC family
BCDPMDNO_01152 5.1e-75 fld C Flavodoxin
BCDPMDNO_01153 2.6e-08 XK27_08880
BCDPMDNO_01154 4.7e-126 XK27_08875 O Zinc-dependent metalloprotease
BCDPMDNO_01155 1.6e-151 estA CE1 S Putative esterase
BCDPMDNO_01156 2.1e-310 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BCDPMDNO_01157 1.2e-135 XK27_08845 S abc transporter atp-binding protein
BCDPMDNO_01158 5.2e-148 XK27_08840 S Belongs to the binding-protein-dependent transport system permease family
BCDPMDNO_01159 2.5e-178 XK27_08835 S ABC transporter substrate binding protein
BCDPMDNO_01160 3.2e-17 S Domain of unknown function (DUF4649)
BCDPMDNO_01162 2.1e-42 Q the current gene model (or a revised gene model) may contain a frame shift
BCDPMDNO_01163 6.3e-28 Q the current gene model (or a revised gene model) may contain a frame shift
BCDPMDNO_01165 3.2e-09 Q the current gene model (or a revised gene model) may contain a frame shift
BCDPMDNO_01167 3.5e-277 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
BCDPMDNO_01168 1.2e-188 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
BCDPMDNO_01169 0.0 dnaE 2.7.7.7 L DNA polymerase
BCDPMDNO_01170 1.4e-152 sua5 2.7.7.87 J Belongs to the SUA5 family
BCDPMDNO_01171 3.1e-112 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BCDPMDNO_01172 2e-274 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BCDPMDNO_01173 1.1e-41 ysdA L Membrane
BCDPMDNO_01174 6.6e-190 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
BCDPMDNO_01175 7.6e-291 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BCDPMDNO_01176 4.6e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BCDPMDNO_01177 1.8e-127 L Transposase and inactivated derivatives IS30 family
BCDPMDNO_01178 2.5e-180 pyrD 1.3.1.14, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate
BCDPMDNO_01180 2.8e-39 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
BCDPMDNO_01181 6.8e-96 ypmS S Protein conserved in bacteria
BCDPMDNO_01182 3.8e-146 ypmR E lipolytic protein G-D-S-L family
BCDPMDNO_01183 1.7e-148 DegV S DegV family
BCDPMDNO_01184 1.3e-304 recN L May be involved in recombinational repair of damaged DNA
BCDPMDNO_01185 7.5e-74 argR K arginine binding
BCDPMDNO_01186 5e-159 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
BCDPMDNO_01187 2.3e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
BCDPMDNO_01188 3.5e-29 xseB 3.1.11.6 L exodeoxyribonuclease VII activity
BCDPMDNO_01189 3.4e-247 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
BCDPMDNO_01192 1.4e-118 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BCDPMDNO_01193 2.9e-125 dnaD
BCDPMDNO_01194 3.5e-182 metA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BCDPMDNO_01195 2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BCDPMDNO_01196 0.0 recJ L Single-strand DNA-specific exonuclease, C terminal domain
BCDPMDNO_01197 3e-139 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
BCDPMDNO_01198 9.2e-175 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
BCDPMDNO_01199 7.9e-117 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
BCDPMDNO_01200 4.1e-223 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BCDPMDNO_01201 6.2e-239 rodA D Belongs to the SEDS family
BCDPMDNO_01202 4.4e-68 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
BCDPMDNO_01203 1.3e-09 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
BCDPMDNO_01204 1.4e-138 hisK 3.1.3.15 E Histidinol phosphatase and related hydrolases of the PHP family
BCDPMDNO_01205 1.8e-121 ylfI S tigr01906
BCDPMDNO_01206 1.7e-142 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
BCDPMDNO_01207 1.5e-143 fat 3.1.2.21 I Acyl-ACP thioesterase
BCDPMDNO_01208 1.3e-215 hemN H Involved in the biosynthesis of porphyrin-containing compound
BCDPMDNO_01212 1.9e-205 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
BCDPMDNO_01213 8.3e-113 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
BCDPMDNO_01214 2.4e-161 rfbA 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
BCDPMDNO_01215 4.8e-207 yurR 1.4.5.1 E oxidoreductase
BCDPMDNO_01216 1.7e-100 zupT P Mediates zinc uptake. May also transport other divalent cations
BCDPMDNO_01217 7e-22 zupT P Mediates zinc uptake. May also transport other divalent cations
BCDPMDNO_01218 9.6e-149 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BCDPMDNO_01219 2.7e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
BCDPMDNO_01220 1.1e-69 gtrA S GtrA-like protein
BCDPMDNO_01221 1.6e-249 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BCDPMDNO_01222 6e-169 ybbR S Protein conserved in bacteria
BCDPMDNO_01223 5.6e-124 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BCDPMDNO_01224 8.3e-254 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain protein
BCDPMDNO_01225 8.7e-150 cobQ S glutamine amidotransferase
BCDPMDNO_01226 0.0 mprF 2.3.2.3 J Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BCDPMDNO_01227 1.1e-130 pip 1.11.1.10 S Alpha beta hydrolase
BCDPMDNO_01228 0.0 uup S abc transporter atp-binding protein
BCDPMDNO_01229 2.1e-114 udk 2.7.1.48 F Cytidine monophosphokinase
BCDPMDNO_01230 1.2e-178 yfmL 3.6.4.13 L DEAD DEAH box helicase
BCDPMDNO_01231 2.4e-19 6.3.2.2, 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
BCDPMDNO_01232 8.6e-265 gapN 1.2.1.9 C Belongs to the aldehyde dehydrogenase family
BCDPMDNO_01233 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BCDPMDNO_01234 1.1e-37 ptsH G phosphocarrier protein Hpr
BCDPMDNO_01235 2.3e-223 icd 1.1.1.42 C Isocitrate dehydrogenase
BCDPMDNO_01236 5.1e-212 citZ 2.3.3.1 C Belongs to the citrate synthase family
BCDPMDNO_01237 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BCDPMDNO_01238 2.2e-34 nrdH O Glutaredoxin
BCDPMDNO_01239 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BCDPMDNO_01240 1.7e-184 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BCDPMDNO_01242 1.1e-74 L Transposase (IS116 IS110 IS902 family)
BCDPMDNO_01243 5.5e-65 L Transposase (IS116 IS110 IS902 family)
BCDPMDNO_01244 1.8e-165 ypuA S secreted protein
BCDPMDNO_01245 1.1e-55 yaeR E COG0346 LactoylglutaTHIone lyase and related lyases
BCDPMDNO_01246 4.6e-58 srtA 3.4.22.70 M Sortase family
BCDPMDNO_01247 1.1e-59 srtA 3.4.22.70 M Sortase (surface protein transpeptidase)
BCDPMDNO_01248 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BCDPMDNO_01249 3.1e-181 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
BCDPMDNO_01250 2.6e-258 noxE P NADH oxidase
BCDPMDNO_01251 2.8e-293 yfmM S abc transporter atp-binding protein
BCDPMDNO_01252 5.4e-46 XK27_01265 S ECF-type riboflavin transporter, S component
BCDPMDNO_01253 5.4e-09 XK27_01265 S ECF-type riboflavin transporter, S component
BCDPMDNO_01254 5.5e-155 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
BCDPMDNO_01255 2e-86 S ECF-type riboflavin transporter, S component
BCDPMDNO_01257 4.2e-239 XK27_08130 K Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
BCDPMDNO_01258 7e-56 nrdD_1 1.1.98.6, 1.17.4.1 F Ribonucleoside-triphosphate reductase
BCDPMDNO_01261 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
BCDPMDNO_01262 9.9e-94 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
BCDPMDNO_01263 3.3e-197 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BCDPMDNO_01264 0.0 smc D Required for chromosome condensation and partitioning
BCDPMDNO_01265 1.9e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
BCDPMDNO_01266 3e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BCDPMDNO_01267 2.3e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BCDPMDNO_01268 2.6e-88 alkD L Dna alkylation repair
BCDPMDNO_01269 1.6e-91 pat 2.3.1.183 M acetyltransferase
BCDPMDNO_01270 2.5e-47 L Transposase
BCDPMDNO_01271 7.3e-280 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BCDPMDNO_01272 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
BCDPMDNO_01273 8.2e-128 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 E hydrolase
BCDPMDNO_01274 4e-64 bioY S biotin transmembrane transporter activity
BCDPMDNO_01275 3.6e-90 proW P Binding-protein-dependent transport system inner membrane component
BCDPMDNO_01276 1.2e-137 proV E abc transporter atp-binding protein
BCDPMDNO_01277 2e-169 proX M ABC transporter, substrate-binding protein, QAT family
BCDPMDNO_01278 1.7e-111 proWZ P ABC transporter (Permease
BCDPMDNO_01279 9e-281 hutH 4.3.1.3 E Histidine ammonia-lyase
BCDPMDNO_01280 5.4e-206 S Protein of unknown function (DUF917)
BCDPMDNO_01281 0.0 hutU 4.2.1.49 E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
BCDPMDNO_01282 3.8e-122 sdaAB 4.3.1.17 E L-serine dehydratase
BCDPMDNO_01283 1.6e-149 sdaAA 4.3.1.17 E L-serine dehydratase
BCDPMDNO_01284 3.3e-26
BCDPMDNO_01285 2.9e-145 S ABC-2 family transporter protein
BCDPMDNO_01286 6.6e-99 S transport system, permease component
BCDPMDNO_01287 6.1e-103 desR K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
BCDPMDNO_01288 2.5e-187 desK 2.7.13.3 T Histidine kinase
BCDPMDNO_01289 4.8e-134 yvfS V ABC-2 type transporter
BCDPMDNO_01290 2.3e-159 XK27_09825 V abc transporter atp-binding protein
BCDPMDNO_01293 1.8e-165 yocS S Transporter
BCDPMDNO_01294 2.4e-80 cdd 2.4.2.4, 3.5.4.5 F cytidine deaminase activity
BCDPMDNO_01295 2.9e-34 XK27_05000 S metal cluster binding
BCDPMDNO_01296 0.0 V ABC transporter (permease)
BCDPMDNO_01297 1.9e-133 macB2 V ABC transporter, ATP-binding protein
BCDPMDNO_01298 3.1e-165 T Histidine kinase
BCDPMDNO_01299 2.4e-124 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
BCDPMDNO_01300 5.1e-67 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
BCDPMDNO_01301 1.4e-74 pbuX F xanthine permease
BCDPMDNO_01302 1.3e-77 pbuX F xanthine permease
BCDPMDNO_01303 6e-36 pbuX F xanthine permease
BCDPMDNO_01304 6.5e-246 norM V Multidrug efflux pump
BCDPMDNO_01305 9.7e-188 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BCDPMDNO_01306 5e-84 yxeM ET Belongs to the bacterial solute-binding protein 3 family
BCDPMDNO_01307 2.9e-198 pcaB 4.3.2.2 F Adenylosuccinate lyase
BCDPMDNO_01308 7.3e-93 yxeO 3.6.3.21 E abc transporter atp-binding protein
BCDPMDNO_01309 4.1e-63 yxeN U ABC transporter, permease protein
BCDPMDNO_01310 5.4e-58 yxeL K Acetyltransferase (GNAT) domain
BCDPMDNO_01311 3e-115 yxeQ S MmgE/PrpD family
BCDPMDNO_01312 2e-95 ykrV3 2.6.1.83 E mutations do not affect methionine salvage in vivo however
BCDPMDNO_01313 1.9e-30 ykrV3 2.6.1.83 E mutations do not affect methionine salvage in vivo however
BCDPMDNO_01314 6.7e-42 gldA 1.1.1.1, 1.1.1.6 C glycerol dehydrogenase
BCDPMDNO_01315 3.4e-50 gldA 1.1.1.1, 1.1.1.6 C glycerol dehydrogenase
BCDPMDNO_01316 3.2e-07 gldA 1.1.1.1, 1.1.1.6 C glycerol dehydrogenase
BCDPMDNO_01317 3e-183 hipO E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
BCDPMDNO_01318 4.3e-234 brnQ E Component of the transport system for branched-chain amino acids
BCDPMDNO_01319 1e-66 manA 5.3.1.8 G mannose-6-phosphate isomerase
BCDPMDNO_01320 2e-49 manA 5.3.1.8 G mannose-6-phosphate isomerase
BCDPMDNO_01321 9.6e-26 csbD K CsbD-like
BCDPMDNO_01323 6.2e-228 yfnA E amino acid
BCDPMDNO_01324 2.5e-109 XK27_02070 S nitroreductase
BCDPMDNO_01325 2.2e-90 1.13.11.2 S glyoxalase
BCDPMDNO_01326 5.6e-77 ywnA K Transcriptional regulator
BCDPMDNO_01327 1.9e-158 E Alpha/beta hydrolase of unknown function (DUF915)
BCDPMDNO_01328 1.2e-233 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BCDPMDNO_01329 1.7e-111 drgA C Nitroreductase
BCDPMDNO_01330 3.5e-87 yoaK S Protein of unknown function (DUF1275)
BCDPMDNO_01332 1.2e-160 yvgN C reductase
BCDPMDNO_01333 1.1e-55 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
BCDPMDNO_01334 2.4e-09
BCDPMDNO_01335 3.1e-115 S Abortive infection C-terminus
BCDPMDNO_01336 0.0 L DEAD-like helicases superfamily
BCDPMDNO_01337 2.7e-123 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
BCDPMDNO_01338 1.1e-283 XK27_07020 S Belongs to the UPF0371 family
BCDPMDNO_01340 1.1e-37 BP1961 P nitric oxide dioxygenase activity
BCDPMDNO_01341 2.4e-54 K response regulator
BCDPMDNO_01342 1.3e-68 S Signal peptide protein, YSIRK family
BCDPMDNO_01344 7.6e-61
BCDPMDNO_01345 1.8e-270 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BCDPMDNO_01346 5.3e-139
BCDPMDNO_01347 5.3e-12 IQ PFAM AMP-dependent synthetase and ligase
BCDPMDNO_01348 2.7e-12 IQ PFAM AMP-dependent synthetase and ligase
BCDPMDNO_01349 5.8e-109 MA20_06410 E LysE type translocator
BCDPMDNO_01351 2.7e-09
BCDPMDNO_01352 0.0 M family 8
BCDPMDNO_01353 1.8e-19
BCDPMDNO_01355 0.0 sbcC L ATPase involved in DNA repair
BCDPMDNO_01356 6.9e-231 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
BCDPMDNO_01357 0.0 lacL 3.2.1.23 G -beta-galactosidase
BCDPMDNO_01358 0.0 lacS G transporter
BCDPMDNO_01359 3.4e-202 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
BCDPMDNO_01360 1.1e-194 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
BCDPMDNO_01361 3e-289 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
BCDPMDNO_01362 1.6e-221 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
BCDPMDNO_01363 8.9e-184 galR K Transcriptional regulator
BCDPMDNO_01364 7.1e-09 L Integrase core domain protein
BCDPMDNO_01365 1.2e-25 L transposition
BCDPMDNO_01366 3e-198 M translation initiation factor activity
BCDPMDNO_01367 4.6e-68 rtxA M M26 IgA1-specific Metallo-endopeptidase C-terminal region
BCDPMDNO_01368 1.3e-76 V abc transporter atp-binding protein
BCDPMDNO_01369 1e-41 V (ABC) transporter
BCDPMDNO_01370 0.0 gshF 6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
BCDPMDNO_01371 2.3e-87 L Transposase
BCDPMDNO_01372 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
BCDPMDNO_01373 1.6e-188 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
BCDPMDNO_01374 3.6e-134 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
BCDPMDNO_01375 5.8e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BCDPMDNO_01378 2.2e-114 vraR K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
BCDPMDNO_01379 1.7e-174 vraS 2.7.13.3 T Histidine kinase
BCDPMDNO_01380 1.1e-119 yvqF KT membrane
BCDPMDNO_01381 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
BCDPMDNO_01382 2e-132 stp 3.1.3.16 T phosphatase
BCDPMDNO_01383 4.4e-247 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BCDPMDNO_01384 3.5e-174 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BCDPMDNO_01385 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BCDPMDNO_01386 2.7e-46 rpoZ 2.7.7.6 K DNA-directed 5'-3' RNA polymerase activity
BCDPMDNO_01387 8.8e-113 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
BCDPMDNO_01388 1.8e-219 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
BCDPMDNO_01389 3.8e-148 XK27_02985 S overlaps another CDS with the same product name
BCDPMDNO_01390 4.1e-147 supH S overlaps another CDS with the same product name
BCDPMDNO_01391 8.6e-63 yvoA_1 K Transcriptional
BCDPMDNO_01392 9.8e-121 skfE V abc transporter atp-binding protein
BCDPMDNO_01393 3.3e-133 V ATPase activity
BCDPMDNO_01394 4.3e-172 oppF P Belongs to the ABC transporter superfamily
BCDPMDNO_01395 2.2e-204 oppD P Belongs to the ABC transporter superfamily
BCDPMDNO_01396 4.9e-168 amiD P ABC transporter (Permease
BCDPMDNO_01397 2.1e-277 amiC P ABC transporter (Permease
BCDPMDNO_01398 1.4e-142 amiA E ABC transporter, substrate-binding protein, family 5
BCDPMDNO_01399 6.3e-160 amiA E ABC transporter, substrate-binding protein, family 5
BCDPMDNO_01400 4.6e-13 L Transposase
BCDPMDNO_01401 3.9e-192 L Transposase
BCDPMDNO_01402 0.0 amiA E ABC transporter, substrate-binding protein, family 5
BCDPMDNO_01403 2e-46 oppF P Belongs to the ABC transporter superfamily
BCDPMDNO_01404 4e-40 tatD L Hydrolase, tatd
BCDPMDNO_01405 2.8e-216 oxlT P COG0477 Permeases of the major facilitator superfamily
BCDPMDNO_01406 7.5e-109 L PFAM Integrase catalytic region
BCDPMDNO_01407 6e-28 L transposition
BCDPMDNO_01408 7.2e-22 L Transposase
BCDPMDNO_01409 7.4e-39 L transposase activity
BCDPMDNO_01410 1.4e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
BCDPMDNO_01411 9.8e-174 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
BCDPMDNO_01412 4e-153 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BCDPMDNO_01413 1.5e-121 yjbM 2.7.6.5 S Gtp pyrophosphokinase
BCDPMDNO_01414 1.5e-103 yjbK S Adenylate cyclase
BCDPMDNO_01415 2.1e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BCDPMDNO_01416 3.2e-206 iscS 2.8.1.7 E Cysteine desulfurase
BCDPMDNO_01417 3.1e-59 XK27_04120 S Putative amino acid metabolism
BCDPMDNO_01418 8.2e-117 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
BCDPMDNO_01419 8.8e-130 puuD T peptidase C26
BCDPMDNO_01420 1.4e-119 radC E Belongs to the UPF0758 family
BCDPMDNO_01421 2.5e-267 M Psort location CytoplasmicMembrane, score
BCDPMDNO_01422 0.0 rgpF M Rhamnan synthesis protein F
BCDPMDNO_01423 3.8e-304 GT4 M transferase activity, transferring glycosyl groups
BCDPMDNO_01424 1.9e-228 rgpD 3.6.3.38 P Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
BCDPMDNO_01425 8e-143 rgpC GM Transport permease protein
BCDPMDNO_01426 2.4e-175 rgpB GT2 M Glycosyltransferase, group 2 family protein
BCDPMDNO_01427 1e-223 rgpA GT4 M Domain of unknown function (DUF1972)
BCDPMDNO_01428 1.3e-105 2.4.1.60 S Glycosyltransferase group 2 family protein
BCDPMDNO_01429 2.6e-47 XK27_09090 S Uncharacterized conserved protein (DUF2304)
BCDPMDNO_01430 2.2e-125 ycbB S Glycosyl transferase family 2
BCDPMDNO_01431 4.6e-39 arnC M group 2 family protein
BCDPMDNO_01432 1.9e-141 M Glycosyltransferase group 2 family protein
BCDPMDNO_01433 4.4e-220 amrA S membrane protein involved in the export of O-antigen and teichoic acid
BCDPMDNO_01434 4e-161 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
BCDPMDNO_01435 1.7e-173 yfdH GT2 M COG0463, glycosyltransferases involved in cell wall biogenesis
BCDPMDNO_01436 3.4e-55 yitW K metal-sulfur cluster biosynthetic enzyme
BCDPMDNO_01437 1.1e-201 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
BCDPMDNO_01438 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
BCDPMDNO_01439 5.5e-20 rpsU J Belongs to the bacterial ribosomal protein bS21 family
BCDPMDNO_01440 9.4e-183 L Transposase and inactivated derivatives IS30 family
BCDPMDNO_01441 1.4e-136 gltS ET Belongs to the bacterial solute-binding protein 3 family
BCDPMDNO_01442 8e-202 arcT 2.6.1.1 E Aminotransferase
BCDPMDNO_01443 4.7e-135 ET Belongs to the bacterial solute-binding protein 3 family
BCDPMDNO_01444 1.4e-142 ET Belongs to the bacterial solute-binding protein 3 family
BCDPMDNO_01445 1.6e-82 mutT 3.6.1.55 F Nudix family
BCDPMDNO_01446 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
BCDPMDNO_01447 2.9e-57 V CAAX protease self-immunity
BCDPMDNO_01448 7.6e-32 S CAAX amino terminal protease family protein
BCDPMDNO_01449 0.0 glnP P ABC-type amino acid transport signal transduction systems periplasmic component domain
BCDPMDNO_01450 6e-137 glnQ 3.6.3.21 E abc transporter atp-binding protein
BCDPMDNO_01451 1.1e-16 XK27_00735
BCDPMDNO_01452 1.4e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BCDPMDNO_01454 1.2e-134 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
BCDPMDNO_01457 2.3e-107 abiGI K Transcriptional regulator, AbiEi antitoxin
BCDPMDNO_01458 7.7e-52 V Psort location Cytoplasmic, score
BCDPMDNO_01459 2.3e-156 K sequence-specific DNA binding
BCDPMDNO_01460 8.9e-253 C Arylsulfatase regulator (Fe-S oxidoreductase)
BCDPMDNO_01461 9.4e-289 V (ABC) transporter
BCDPMDNO_01462 9.6e-10
BCDPMDNO_01463 1.9e-43 S Domain of unknown function (DUF4299)
BCDPMDNO_01464 5.5e-65 paaI Q protein possibly involved in aromatic compounds catabolism
BCDPMDNO_01465 2.5e-153 EG Permeases of the drug metabolite transporter (DMT) superfamily
BCDPMDNO_01467 3.1e-113 serB 3.1.3.3 E phosphoserine phosphatase
BCDPMDNO_01468 3e-304 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
BCDPMDNO_01469 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BCDPMDNO_01470 2.6e-109 3.1.3.18 S IA, variant 1
BCDPMDNO_01471 2.2e-117 lrgB M effector of murein hydrolase
BCDPMDNO_01472 2.2e-58 lrgA S Effector of murein hydrolase LrgA
BCDPMDNO_01474 5.4e-59 arsC 1.20.4.1 P Belongs to the ArsC family
BCDPMDNO_01475 3.1e-56 ogt 2.1.1.63, 3.2.2.20 L methylated-DNA-[protein]-cysteine S-methyltransferase activity
BCDPMDNO_01476 1.1e-220 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BCDPMDNO_01477 1.3e-104 wecD M Acetyltransferase (GNAT) domain
BCDPMDNO_01478 1.3e-209 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BCDPMDNO_01479 5.4e-116 GK ROK family
BCDPMDNO_01480 8.1e-72 gloA 4.4.1.5 E Lactoylglutathione lyase
BCDPMDNO_01481 1e-115 XK27_08050 O HflC and HflK could regulate a protease
BCDPMDNO_01483 9.8e-205 potD P spermidine putrescine ABC transporter
BCDPMDNO_01484 4.3e-133 potC P ABC-type spermidine putrescine transport system, permease component II
BCDPMDNO_01485 1.4e-139 potB P ABC-type spermidine putrescine transport system, permease component I
BCDPMDNO_01486 3.6e-213 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
BCDPMDNO_01487 4.6e-171 murB 1.3.1.98 M cell wall formation
BCDPMDNO_01488 5e-87 folK 2.7.6.3, 4.1.2.25 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BCDPMDNO_01489 1.2e-61 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BCDPMDNO_01490 1.2e-298 amy 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
BCDPMDNO_01491 7e-147 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BCDPMDNO_01492 1e-99 folE 3.5.4.16 F gtp cyclohydrolase
BCDPMDNO_01493 0.0 ydaO E amino acid
BCDPMDNO_01494 1.1e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
BCDPMDNO_01495 4.1e-37 ylqC L Belongs to the UPF0109 family
BCDPMDNO_01496 2.4e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
BCDPMDNO_01497 2.6e-171 tehB 2.1.1.265 PQ tellurite resistance protein tehb
BCDPMDNO_01498 2e-157 xth 3.1.11.2 L exodeoxyribonuclease III
BCDPMDNO_01499 2.8e-74 S QueT transporter
BCDPMDNO_01500 5.2e-121 ribD 1.1.1.193, 3.5.4.26 L Transposase DDE domain
BCDPMDNO_01501 4.3e-186 yegS 2.7.1.107 I Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
BCDPMDNO_01502 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BCDPMDNO_01503 1.3e-85 ccl S cog cog4708
BCDPMDNO_01504 6.5e-160 rbn E Belongs to the UPF0761 family
BCDPMDNO_01505 5.5e-166 map 3.4.11.18 E Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed
BCDPMDNO_01506 1.7e-232 ytoI K transcriptional regulator containing CBS domains
BCDPMDNO_01507 1.8e-98 XK27_07830 2.3.1.128 J Acetyltransferase GNAT Family
BCDPMDNO_01508 1.2e-233 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BCDPMDNO_01509 0.0 comEC S Competence protein ComEC
BCDPMDNO_01510 4e-98 comEA L COG1555 DNA uptake protein and related DNA-binding proteins
BCDPMDNO_01511 1.3e-142 plsC 2.3.1.51 I Acyltransferase
BCDPMDNO_01512 1.4e-82 nodB3 G polysaccharide deacetylase
BCDPMDNO_01513 4.1e-49 nodB3 G polysaccharide deacetylase
BCDPMDNO_01514 9.3e-141 yabB 2.1.1.223 L Methyltransferase
BCDPMDNO_01515 1e-41 yazA L endonuclease containing a URI domain
BCDPMDNO_01516 2.8e-256 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
BCDPMDNO_01517 2.3e-154 corA P CorA-like protein
BCDPMDNO_01518 2.5e-62 yjqA S Bacterial PH domain
BCDPMDNO_01519 7.8e-100 thiT S Thiamine transporter
BCDPMDNO_01520 9.5e-158 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
BCDPMDNO_01521 3.2e-201 yjbB G Permeases of the major facilitator superfamily
BCDPMDNO_01522 2.3e-300 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
BCDPMDNO_01523 1.1e-121 ywaF S Integral membrane protein (intg_mem_TP0381)
BCDPMDNO_01524 5.2e-259 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
BCDPMDNO_01527 1.1e-155 cjaA ET ABC transporter substrate-binding protein
BCDPMDNO_01528 1.4e-136 glnQ 3.6.3.21 E abc transporter atp-binding protein
BCDPMDNO_01529 7.8e-107 P ABC transporter (Permease
BCDPMDNO_01530 6e-115 papP P ABC transporter (Permease
BCDPMDNO_01531 8.4e-193 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
BCDPMDNO_01532 4.7e-31 copZ 2.7.7.77 P Heavy metal-associated domain protein
BCDPMDNO_01533 0.0 copA 3.6.3.54 P P-type ATPase
BCDPMDNO_01534 3.2e-74 copY K negative regulation of transcription, DNA-templated
BCDPMDNO_01535 4.6e-143 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
BCDPMDNO_01536 9.3e-228 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
BCDPMDNO_01537 5.5e-101 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E belongs to the TrpF family
BCDPMDNO_01538 1.9e-133 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
BCDPMDNO_01539 2.3e-179 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BCDPMDNO_01540 2.1e-105 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH anthranilate
BCDPMDNO_01541 2.5e-258 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BCDPMDNO_01542 1.3e-42 pchB 2.5.1.19, 4.2.1.10, 4.2.99.21, 5.4.99.5 E Chorismate mutase
BCDPMDNO_01543 3.2e-56
BCDPMDNO_01544 0.0 ctpE P E1-E2 ATPase
BCDPMDNO_01545 6.1e-27
BCDPMDNO_01546 1.2e-43 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BCDPMDNO_01547 1.9e-46 L transposase activity
BCDPMDNO_01548 9.9e-115 K transcriptional regulator, MerR family
BCDPMDNO_01549 3.7e-105 dnaQ 2.7.7.7 L DNA polymerase III
BCDPMDNO_01550 9.1e-42 WQ51_02910 S Protein of unknown function, DUF536
BCDPMDNO_01551 4.8e-63 XK27_02560 S cog cog2151
BCDPMDNO_01552 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
BCDPMDNO_01553 7.7e-227 ytfP S Flavoprotein
BCDPMDNO_01555 3.1e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
BCDPMDNO_01556 6e-151 ytmP 2.7.1.89 M Phosphotransferase
BCDPMDNO_01557 3.9e-182 ecsB U ABC transporter
BCDPMDNO_01558 2.3e-133 ecsA V abc transporter atp-binding protein
BCDPMDNO_01559 4.3e-71 hit FG Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
BCDPMDNO_01560 6.2e-11
BCDPMDNO_01561 3.2e-110
BCDPMDNO_01563 0.0 clpL O ATP-dependent Clp protease ATP-binding subunit
BCDPMDNO_01564 1.3e-204 ylbM S Belongs to the UPF0348 family
BCDPMDNO_01565 7.7e-140 yqeM Q Methyltransferase domain protein
BCDPMDNO_01566 6e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
BCDPMDNO_01567 1.4e-107 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
BCDPMDNO_01568 4.1e-118 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BCDPMDNO_01569 3.5e-49 yhbY J RNA-binding protein
BCDPMDNO_01570 1.7e-215 yqeH S in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
BCDPMDNO_01571 1.8e-98 yqeG S hydrolase of the HAD superfamily
BCDPMDNO_01572 6.7e-154 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
BCDPMDNO_01573 1.4e-65
BCDPMDNO_01574 7.8e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BCDPMDNO_01575 1.8e-270 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
BCDPMDNO_01576 1.4e-47 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BCDPMDNO_01577 4.4e-25 2.4.1.52 GT4 M transferase activity, transferring glycosyl groups
BCDPMDNO_01578 7.4e-32 M lipopolysaccharide 3-alpha-galactosyltransferase activity
BCDPMDNO_01579 3.8e-96 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
BCDPMDNO_01580 1.2e-148 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
BCDPMDNO_01581 6.7e-95 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BCDPMDNO_01582 3.1e-153 hlpA M Belongs to the NlpA lipoprotein family
BCDPMDNO_01583 6.8e-101 pncA Q isochorismatase
BCDPMDNO_01584 1.2e-140 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
BCDPMDNO_01585 6.2e-240 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase
BCDPMDNO_01586 2.4e-75 XK27_03180 T universal stress protein
BCDPMDNO_01588 2e-157 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BCDPMDNO_01589 2e-239 hlyX S COG1253 Hemolysins and related proteins containing CBS domains
BCDPMDNO_01590 2.4e-144 modF 3.6.3.21, 3.6.3.34 P abc transporter atp-binding protein
BCDPMDNO_01591 0.0 yjcE P NhaP-type Na H and K H antiporters
BCDPMDNO_01593 2.4e-98 ytqB 2.1.1.176 J (SAM)-dependent
BCDPMDNO_01594 1.3e-184 yhcC S radical SAM protein
BCDPMDNO_01595 2.2e-196 ylbL T Belongs to the peptidase S16 family
BCDPMDNO_01596 2e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BCDPMDNO_01597 5.1e-93 rsmD 2.1.1.171 L Methyltransferase
BCDPMDNO_01598 1.9e-172 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
BCDPMDNO_01599 1.8e-07 S Protein of unknown function (DUF4059)
BCDPMDNO_01600 3.4e-132 tcyN 3.6.3.21 E abc transporter atp-binding protein
BCDPMDNO_01601 3.4e-172 yxeN P ABC transporter (Permease
BCDPMDNO_01602 2.6e-149 yxeM ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
BCDPMDNO_01604 6.5e-204 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BCDPMDNO_01605 0.0 pflB 2.3.1.54 C formate acetyltransferase'
BCDPMDNO_01606 2.2e-122 cah 4.2.1.1 P carbonic anhydrase
BCDPMDNO_01607 8.4e-37 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
BCDPMDNO_01608 5.6e-33 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
BCDPMDNO_01609 7.1e-44 hsdS_1 3.1.21.3 V type I restriction modification DNA specificity domain
BCDPMDNO_01610 3.4e-32 D nuclear chromosome segregation
BCDPMDNO_01611 4.1e-80 L DNA integration
BCDPMDNO_01612 7.1e-124 XK27_05540 S Gram-negative-bacterium-type cell wall biogenesis
BCDPMDNO_01613 1.5e-127 ybbM S transport system, permease component
BCDPMDNO_01614 6.8e-116 ybbL S abc transporter atp-binding protein
BCDPMDNO_01615 3.1e-31
BCDPMDNO_01616 1e-184 ampC V COG1680 Beta-lactamase class C and other penicillin binding proteins
BCDPMDNO_01617 4.6e-140 cppA E CppA N-terminal
BCDPMDNO_01618 9.4e-183 L Transposase and inactivated derivatives IS30 family
BCDPMDNO_01619 9.1e-30 V CAAX protease self-immunity
BCDPMDNO_01620 2.3e-164 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
BCDPMDNO_01621 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
BCDPMDNO_01623 6.4e-88 L Transposase
BCDPMDNO_01624 1.2e-165 L integrase core domain
BCDPMDNO_01626 8.9e-133 agrA KT phosphorelay signal transduction system
BCDPMDNO_01627 3.8e-238 blpH 2.7.13.3 T protein histidine kinase activity
BCDPMDNO_01629 1.3e-157 mesE M Transport protein ComB
BCDPMDNO_01630 2.7e-44 mesE M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BCDPMDNO_01631 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
BCDPMDNO_01632 0.0 mdlB V abc transporter atp-binding protein
BCDPMDNO_01633 0.0 mdlA V abc transporter atp-binding protein
BCDPMDNO_01635 1.5e-92 XK27_09885 V Glycopeptide antibiotics resistance protein
BCDPMDNO_01636 7.9e-224 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
BCDPMDNO_01637 2.3e-72 yutD J protein conserved in bacteria
BCDPMDNO_01638 9.6e-269 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
BCDPMDNO_01640 3.2e-221 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
BCDPMDNO_01641 6.3e-185 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BCDPMDNO_01642 0.0 ftsI 3.4.16.4 M penicillin-binding protein
BCDPMDNO_01643 5.6e-47 ftsL D cell division protein FtsL
BCDPMDNO_01644 3.9e-173 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
BCDPMDNO_01645 4e-54
BCDPMDNO_01646 1.4e-22
BCDPMDNO_01647 1.1e-33
BCDPMDNO_01648 6.3e-31 yhaI J Protein of unknown function (DUF805)
BCDPMDNO_01649 3.5e-10 D nuclear chromosome segregation
BCDPMDNO_01650 6.9e-226 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BCDPMDNO_01651 4.4e-141 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BCDPMDNO_01652 1.4e-287 XK27_00765
BCDPMDNO_01653 1.1e-89 ecsA_2 V abc transporter atp-binding protein
BCDPMDNO_01654 2e-45 ecsA_2 V ATPase activity
BCDPMDNO_01655 1.5e-104 S Protein of unknown function (DUF554)
BCDPMDNO_01656 1.6e-11 S Protein of unknown function (DUF554)
BCDPMDNO_01657 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
BCDPMDNO_01658 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
BCDPMDNO_01659 2.6e-66 liaI S membrane
BCDPMDNO_01660 5.4e-10 XK27_02470 K LytTr DNA-binding domain protein
BCDPMDNO_01661 7.1e-68 KT response to antibiotic
BCDPMDNO_01662 9.1e-18 KT response to antibiotic
BCDPMDNO_01663 1.7e-79 yebC M Membrane
BCDPMDNO_01664 8.5e-18 yebC M Membrane
BCDPMDNO_01665 2.5e-261 XK27_03190 5.2.1.8 S hydrolases of the HAD superfamily
BCDPMDNO_01666 1.8e-181 ansA 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
BCDPMDNO_01667 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BCDPMDNO_01668 1.9e-182 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BCDPMDNO_01669 4.1e-62 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
BCDPMDNO_01670 5.2e-195 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BCDPMDNO_01671 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
BCDPMDNO_01673 3e-189 manA 5.3.1.8 G mannose-6-phosphate isomerase
BCDPMDNO_01674 2e-171 scrK 2.7.1.2, 2.7.1.4 GK Fructokinase
BCDPMDNO_01675 0.0 scrA 2.7.1.211 G pts system
BCDPMDNO_01676 4.1e-291 scrB 3.2.1.26 GH32 G invertase
BCDPMDNO_01677 9.6e-33 scrR K purine nucleotide biosynthetic process
BCDPMDNO_01678 2.1e-114 scrR K Transcriptional
BCDPMDNO_01679 2.1e-73 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BCDPMDNO_01680 3.4e-62 yqhY S protein conserved in bacteria
BCDPMDNO_01681 1.2e-97 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BCDPMDNO_01682 3.7e-84 comEB 3.5.4.12 F ComE operon protein 2
BCDPMDNO_01683 4.2e-192 pepP 3.4.11.9, 3.4.13.9 E Belongs to the peptidase M24B family
BCDPMDNO_01686 1.9e-44 V 'abc transporter, ATP-binding protein
BCDPMDNO_01687 4.3e-36 V 'abc transporter, ATP-binding protein
BCDPMDNO_01690 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BCDPMDNO_01691 5.8e-169 corA P COG0598 Mg2 and Co2 transporters
BCDPMDNO_01692 2e-123 XK27_01040 S Pfam PF06570
BCDPMDNO_01694 9.7e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BCDPMDNO_01695 2.7e-91 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
BCDPMDNO_01696 3.9e-47 rpsF J Binds together with S18 to 16S ribosomal RNA
BCDPMDNO_01698 2.8e-28 XK27_05745
BCDPMDNO_01699 4.2e-230 mutY L A G-specific adenine glycosylase
BCDPMDNO_01703 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BCDPMDNO_01704 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
BCDPMDNO_01705 3e-93 cvpA S toxin biosynthetic process
BCDPMDNO_01706 2.3e-13 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
BCDPMDNO_01707 1.8e-159 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BCDPMDNO_01708 1.3e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
BCDPMDNO_01709 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
BCDPMDNO_01710 8.8e-48 azlD E branched-chain amino acid
BCDPMDNO_01711 3.8e-117 azlC E AzlC protein
BCDPMDNO_01712 1.9e-186 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BCDPMDNO_01713 1.3e-73 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
BCDPMDNO_01714 5.6e-121 yeaZ 2.3.1.234 O COG1214, inactive homolog of metal-dependent proteases
BCDPMDNO_01715 2.5e-33 ykzG S Belongs to the UPF0356 family
BCDPMDNO_01716 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BCDPMDNO_01717 2.6e-263 glnA 6.3.1.2 E glutamine synthetase
BCDPMDNO_01718 8.5e-63 glnR K Transcriptional regulator
BCDPMDNO_01719 1.3e-87 S Fusaric acid resistance protein-like
BCDPMDNO_01720 8.7e-38 L Transposase
BCDPMDNO_01721 3.4e-222 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
BCDPMDNO_01722 5.5e-42 L Transposase
BCDPMDNO_01723 9.4e-46 L transposase activity
BCDPMDNO_01724 2.5e-22 L Transposase
BCDPMDNO_01725 4.2e-53 L transposition
BCDPMDNO_01726 1e-84 L Integrase core domain protein
BCDPMDNO_01727 1.2e-188 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
BCDPMDNO_01728 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BCDPMDNO_01729 6.7e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
BCDPMDNO_01730 2.3e-69 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BCDPMDNO_01731 2.4e-142 purR 2.4.2.7 F operon repressor
BCDPMDNO_01732 5.3e-178 cbf S 3'-5' exoribonuclease yhaM
BCDPMDNO_01733 6.9e-173 rmuC S RmuC domain protein
BCDPMDNO_01734 2.4e-118 thiN 2.7.6.2 H thiamine pyrophosphokinase
BCDPMDNO_01735 3e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
BCDPMDNO_01736 1.2e-163 rsgA 3.1.3.100 G One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
BCDPMDNO_01738 8.9e-156 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
BCDPMDNO_01739 1.1e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BCDPMDNO_01740 1.4e-144 tatD L Hydrolase, tatd
BCDPMDNO_01741 1.5e-74 yccU S CoA-binding protein
BCDPMDNO_01742 4.8e-51 trxA O Belongs to the thioredoxin family
BCDPMDNO_01743 7.8e-143 S Macro domain protein
BCDPMDNO_01744 9.1e-10 L thioesterase
BCDPMDNO_01745 3.2e-53 bta 1.8.1.8 CO cell redox homeostasis
BCDPMDNO_01748 4.8e-226 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
BCDPMDNO_01749 1.6e-87 L Transposase
BCDPMDNO_01750 1e-13 rpmH J Ribosomal protein L34
BCDPMDNO_01751 3.8e-185 jag S RNA-binding protein
BCDPMDNO_01752 7.5e-141 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BCDPMDNO_01753 1.2e-55 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
BCDPMDNO_01754 1.9e-264 argH 4.3.2.1 E Argininosuccinate lyase
BCDPMDNO_01755 2e-230 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
BCDPMDNO_01756 2.1e-282 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BCDPMDNO_01757 3.9e-81 amiA E transmembrane transport
BCDPMDNO_01758 4.9e-75 amiA E transmembrane transport
BCDPMDNO_01759 4.8e-120 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
BCDPMDNO_01760 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BCDPMDNO_01761 9.2e-51 S Protein of unknown function (DUF3397)
BCDPMDNO_01762 2e-88 cah 4.2.1.1 P Reversible hydration of carbon dioxide
BCDPMDNO_01763 1.4e-36 WQ51_05710 S Mitochondrial biogenesis AIM24
BCDPMDNO_01764 8.1e-12 WQ51_05710 S Mitochondrial biogenesis AIM24
BCDPMDNO_01765 4.8e-227 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BCDPMDNO_01766 1.1e-80 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
BCDPMDNO_01767 4.1e-65 XK27_09620 S FMN reductase (NADPH) activity
BCDPMDNO_01768 8.3e-34 XK27_09620 S FMN reductase (NADPH) activity
BCDPMDNO_01769 6.6e-34 XK27_09615 S FMN reductase (NADPH) activity
BCDPMDNO_01770 1.9e-132 XK27_09615 S PAS domain
BCDPMDNO_01771 1.1e-07 fnt P Formate nitrite transporter
BCDPMDNO_01772 2.9e-63 fnt P Formate nitrite transporter
BCDPMDNO_01773 7.2e-64 XK27_08585 S Psort location CytoplasmicMembrane, score
BCDPMDNO_01774 4.4e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
BCDPMDNO_01775 1.8e-170 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
BCDPMDNO_01776 2e-118 gluP 3.4.21.105 O membrane protein (homolog of Drosophila rhomboid)
BCDPMDNO_01777 9.1e-95 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BCDPMDNO_01778 1e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
BCDPMDNO_01779 8.1e-59 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
BCDPMDNO_01780 2.7e-48 S glycolate biosynthetic process
BCDPMDNO_01781 4e-65 S phosphatase activity
BCDPMDNO_01782 2.4e-158 rrmA 2.1.1.187 Q methyltransferase
BCDPMDNO_01784 4.6e-91 tadA 3.5.4.1, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
BCDPMDNO_01785 5.1e-66 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
BCDPMDNO_01786 8.3e-37 yeeD O sulfur carrier activity
BCDPMDNO_01787 1.9e-189 yeeE S Sulphur transport
BCDPMDNO_01788 6.7e-113 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
BCDPMDNO_01789 4.2e-55 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
BCDPMDNO_01790 7e-09 S Domain of unknown function (DUF4651)
BCDPMDNO_01791 2e-205 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
BCDPMDNO_01792 3.9e-131 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BCDPMDNO_01793 1.9e-110 S CAAX amino terminal protease family protein
BCDPMDNO_01795 7.6e-68 V CAAX protease self-immunity
BCDPMDNO_01796 8.8e-27 lanR K sequence-specific DNA binding
BCDPMDNO_01797 2.6e-222 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BCDPMDNO_01798 5.9e-177 ytxK 2.1.1.72 L DNA methylase
BCDPMDNO_01799 6.8e-13 comGF U Putative Competence protein ComGF
BCDPMDNO_01800 4e-72 comGF U Competence protein ComGF
BCDPMDNO_01801 2.4e-15 NU Type II secretory pathway pseudopilin
BCDPMDNO_01802 1.8e-57 cglD NU Competence protein
BCDPMDNO_01803 8.5e-43 comGC U Required for transformation and DNA binding
BCDPMDNO_01804 1e-151 cglB NU type II secretion system
BCDPMDNO_01805 4.5e-177 comGA NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BCDPMDNO_01806 1e-68 S cog cog4699
BCDPMDNO_01807 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BCDPMDNO_01808 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BCDPMDNO_01809 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
BCDPMDNO_01810 1.2e-238 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BCDPMDNO_01811 1.2e-196 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BCDPMDNO_01812 7.7e-77 ilvN 2.2.1.6 E Acetolactate synthase
BCDPMDNO_01813 0.0 ilvB 2.2.1.6 EH Acetolactate synthase
BCDPMDNO_01814 3.3e-283 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
BCDPMDNO_01815 8.4e-09 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
BCDPMDNO_01816 1.7e-304 yloV S kinase related to dihydroxyacetone kinase
BCDPMDNO_01817 1.4e-57 asp S cog cog1302
BCDPMDNO_01818 1.9e-226 norM V Mate efflux family protein
BCDPMDNO_01819 1.9e-278 thrC 4.2.3.1 E Threonine synthase
BCDPMDNO_01820 1.4e-62 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
BCDPMDNO_01821 8e-35 adhE 1.1.1.1, 1.2.1.10 C hydroxyacid-oxoacid transhydrogenase activity
BCDPMDNO_01822 3.5e-76 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
BCDPMDNO_01823 7.4e-103 1.1.1.1, 1.1.99.1, 1.2.1.10, 1.2.1.18, 1.2.1.27, 1.2.1.3 C Dehydrogenase
BCDPMDNO_01824 5.1e-66 adhE 1.1.1.1, 1.2.1.10 C Dehydrogenase
BCDPMDNO_01825 0.0 pepO 3.4.24.71 O Peptidase family M13
BCDPMDNO_01826 2.3e-120 treC 3.2.1.93 GH13 G COG0366 Glycosidases
BCDPMDNO_01827 7e-67 treC 3.2.1.93 GH13 G COG0366 Glycosidases
BCDPMDNO_01828 2e-56 treB 2.7.1.201 G PTS System
BCDPMDNO_01829 5.8e-21 treR K DNA-binding transcription factor activity
BCDPMDNO_01830 2.3e-87 treR K trehalose operon
BCDPMDNO_01831 5.7e-95 ywlG S Belongs to the UPF0340 family
BCDPMDNO_01834 2.7e-13 L PFAM Integrase, catalytic core
BCDPMDNO_01835 4e-75 L PFAM Integrase, catalytic core
BCDPMDNO_01836 8.2e-165 fba 4.1.2.13, 4.1.2.29 G aldolase
BCDPMDNO_01838 2.1e-111 6.3.2.2 H ergothioneine biosynthetic process
BCDPMDNO_01839 1.1e-16 6.3.2.2 H gamma-glutamylcysteine synthetase
BCDPMDNO_01840 2.5e-12 6.3.2.2 H gamma-glutamylcysteine synthetase
BCDPMDNO_01841 1.2e-32 L PFAM Integrase, catalytic core
BCDPMDNO_01842 3.7e-76 L PFAM Integrase, catalytic core
BCDPMDNO_01843 3.3e-62 rplQ J ribosomal protein l17
BCDPMDNO_01844 4.8e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BCDPMDNO_01845 9.6e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BCDPMDNO_01846 4e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BCDPMDNO_01847 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
BCDPMDNO_01848 2.7e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BCDPMDNO_01849 9.2e-121 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
BCDPMDNO_01850 3.3e-231 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
BCDPMDNO_01851 7.4e-58 rplO J binds to the 23S rRNA
BCDPMDNO_01852 2.5e-23 rpmD J ribosomal protein l30
BCDPMDNO_01853 1.7e-79 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BCDPMDNO_01854 1.1e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BCDPMDNO_01855 2.3e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BCDPMDNO_01856 1.2e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BCDPMDNO_01857 1.5e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BCDPMDNO_01858 1.2e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BCDPMDNO_01859 1.1e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BCDPMDNO_01860 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BCDPMDNO_01861 2e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BCDPMDNO_01862 2.7e-26 rpmC J Belongs to the universal ribosomal protein uL29 family
BCDPMDNO_01863 3.2e-71 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BCDPMDNO_01864 3.6e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BCDPMDNO_01865 7.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BCDPMDNO_01866 8.3e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BCDPMDNO_01867 8.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BCDPMDNO_01868 2.4e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
BCDPMDNO_01869 5.7e-104 rplD J Forms part of the polypeptide exit tunnel
BCDPMDNO_01870 1.8e-110 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BCDPMDNO_01871 3.2e-47 rpsJ J Involved in the binding of tRNA to the ribosomes
BCDPMDNO_01872 7.8e-188 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
BCDPMDNO_01873 0.0 XK27_09800 I Acyltransferase
BCDPMDNO_01874 1.7e-35 XK27_09805 S MORN repeat protein
BCDPMDNO_01875 1.8e-80 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BCDPMDNO_01876 4.1e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BCDPMDNO_01877 8.9e-95 adk 2.7.4.3 F topology modulation protein
BCDPMDNO_01878 3.1e-172 yxaM EGP Major facilitator Superfamily
BCDPMDNO_01879 1.9e-197 2.7.7.73, 2.7.7.80 H Involved in molybdopterin and thiamine biosynthesis, family 2
BCDPMDNO_01880 6.3e-54 L Transposase
BCDPMDNO_01881 4.1e-147 L Transposase
BCDPMDNO_01883 3.4e-155 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
BCDPMDNO_01884 0.0 KLT serine threonine protein kinase
BCDPMDNO_01885 1.2e-33 V ABC transporter
BCDPMDNO_01886 1.4e-237 V ABC transporter
BCDPMDNO_01887 2.4e-13 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
BCDPMDNO_01888 3.7e-128 Z012_04635 K sequence-specific DNA binding
BCDPMDNO_01890 3.6e-232 C Radical SAM
BCDPMDNO_01891 3.9e-287 V ABC transporter transmembrane region
BCDPMDNO_01892 5.9e-156 L Replication initiation factor
BCDPMDNO_01893 1.9e-18 S Domain of unknown function (DUF3173)
BCDPMDNO_01894 3.5e-216 int L Belongs to the 'phage' integrase family
BCDPMDNO_01896 5.2e-237 rarA L ATPase related to the helicase subunit of the Holliday junction resolvase
BCDPMDNO_01897 8.4e-27 rpmB J Belongs to the bacterial ribosomal protein bL28 family
BCDPMDNO_01898 2.2e-44 yrzL S Belongs to the UPF0297 family
BCDPMDNO_01899 9.5e-71 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BCDPMDNO_01900 1.2e-43 yrzB S Belongs to the UPF0473 family
BCDPMDNO_01901 7.8e-302 ccs S the current gene model (or a revised gene model) may contain a frame shift
BCDPMDNO_01902 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
BCDPMDNO_01903 7.5e-14
BCDPMDNO_01904 3.4e-91 XK27_10930 K acetyltransferase
BCDPMDNO_01905 2.8e-116 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BCDPMDNO_01906 1.3e-145 yaaA S Belongs to the UPF0246 family
BCDPMDNO_01907 3.4e-169 XK27_01785 S cog cog1284
BCDPMDNO_01908 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
BCDPMDNO_01910 1.2e-241 hisS 6.1.1.21 J histidyl-tRNA synthetase
BCDPMDNO_01911 4.3e-130 metE 2.1.1.14 E Methionine synthase
BCDPMDNO_01912 1.4e-36 metE 2.1.1.14 E Methionine synthase
BCDPMDNO_01913 2e-25 rpmF J Belongs to the bacterial ribosomal protein bL32 family
BCDPMDNO_01914 6.7e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
BCDPMDNO_01917 4.8e-51 yegS 2.7.1.107 I lipid kinase activity
BCDPMDNO_01918 8.5e-97 S Hydrophobic domain protein
BCDPMDNO_01920 7.4e-28 S Membrane
BCDPMDNO_01921 1.4e-101
BCDPMDNO_01922 1.8e-23 S Small integral membrane protein
BCDPMDNO_01923 1.1e-85 M Protein conserved in bacteria
BCDPMDNO_01924 2.8e-12 K CsbD-like
BCDPMDNO_01925 2.8e-102 nudL L hydrolase
BCDPMDNO_01926 3.4e-13 nudL L hydrolase
BCDPMDNO_01927 4e-19 K negative regulation of transcription, DNA-templated
BCDPMDNO_01928 4.4e-24 K negative regulation of transcription, DNA-templated
BCDPMDNO_01930 8e-109 S Putative adhesin
BCDPMDNO_01931 5.6e-160 XK27_06930 V domain protein
BCDPMDNO_01932 6.4e-96 XK27_06935 K transcriptional regulator
BCDPMDNO_01933 4.8e-55 ypaA S membrane
BCDPMDNO_01934 2.7e-08
BCDPMDNO_01935 9.8e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
BCDPMDNO_01936 8.2e-48 veg S Biofilm formation stimulator VEG
BCDPMDNO_01937 1.5e-245 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
BCDPMDNO_01938 6.7e-70 rplI J binds to the 23S rRNA
BCDPMDNO_01939 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
BCDPMDNO_01940 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
BCDPMDNO_01941 8.6e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
BCDPMDNO_01942 0.0 S Bacterial membrane protein, YfhO
BCDPMDNO_01943 2e-93 isaA GH23 M Immunodominant staphylococcal antigen A
BCDPMDNO_01944 3.1e-93 lytE M LysM domain protein
BCDPMDNO_01945 2e-138 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BCDPMDNO_01946 5.2e-153 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BCDPMDNO_01947 1.5e-152 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BCDPMDNO_01948 1.2e-89 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BCDPMDNO_01949 1.7e-138 ymfM S sequence-specific DNA binding
BCDPMDNO_01950 1.2e-241 ymfH S Peptidase M16
BCDPMDNO_01951 1.1e-234 ymfF S Peptidase M16
BCDPMDNO_01952 1.6e-45 yaaA S S4 domain protein YaaA
BCDPMDNO_01953 5.9e-205 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BCDPMDNO_01954 1.5e-275 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
BCDPMDNO_01955 6.3e-193 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
BCDPMDNO_01956 4.2e-153 yvjA S membrane
BCDPMDNO_01957 6.7e-306 ybiT S abc transporter atp-binding protein
BCDPMDNO_01958 0.0 XK27_10405 S Bacterial membrane protein YfhO
BCDPMDNO_01962 6.2e-120 yoaK S Psort location CytoplasmicMembrane, score
BCDPMDNO_01963 8.6e-87 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BCDPMDNO_01964 6.2e-195 htrA 3.4.21.107 O Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain'
BCDPMDNO_01965 7.7e-135 parB K Belongs to the ParB family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)