ORF_ID e_value Gene_name EC_number CAZy COGs Description
CIHINEOD_00001 0.0 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CIHINEOD_00002 1.9e-206 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
CIHINEOD_00003 9.2e-267 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CIHINEOD_00004 5.8e-91 S Protein of unknown function (DUF721)
CIHINEOD_00005 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CIHINEOD_00006 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CIHINEOD_00007 6.2e-75 S Transmembrane domain of unknown function (DUF3566)
CIHINEOD_00008 1.8e-217 V VanZ like family
CIHINEOD_00009 1.9e-161 yplQ S Haemolysin-III related
CIHINEOD_00010 5.8e-263 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
CIHINEOD_00011 2e-236 EGP Major facilitator Superfamily
CIHINEOD_00012 8.8e-162 3.2.1.78 GH26 G Glycosyl hydrolase family 26
CIHINEOD_00013 4e-68 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
CIHINEOD_00014 3.5e-51 gcs2 S A circularly permuted ATPgrasp
CIHINEOD_00017 2.4e-144 S Protein of unknown function DUF45
CIHINEOD_00018 8.1e-78
CIHINEOD_00019 1.6e-154 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
CIHINEOD_00020 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CIHINEOD_00021 1.1e-149 ybaJ Q ubiE/COQ5 methyltransferase family
CIHINEOD_00022 7.7e-166
CIHINEOD_00023 2e-106 XK27_04590 S NADPH-dependent FMN reductase
CIHINEOD_00024 8e-120
CIHINEOD_00025 2.1e-22
CIHINEOD_00028 4.7e-57 mazG S MazG-like family
CIHINEOD_00029 4.4e-26 L Uncharacterized conserved protein (DUF2075)
CIHINEOD_00031 3.1e-194 sinIM 2.1.1.37 H C-5 cytosine-specific DNA methylase
CIHINEOD_00032 2e-47 S Type II restriction endonuclease EcoO109I
CIHINEOD_00033 0.0
CIHINEOD_00034 3.4e-111
CIHINEOD_00035 0.0
CIHINEOD_00036 2.8e-287
CIHINEOD_00037 3.4e-38 S Bacterial toxin of type II toxin-antitoxin system, YafQ
CIHINEOD_00038 2.6e-34 chpA T Toxic component of a toxin-antitoxin (TA) module
CIHINEOD_00039 4.5e-67 chpA T Toxic component of a toxin-antitoxin (TA) module
CIHINEOD_00040 3.7e-165 K Bacterial regulatory helix-turn-helix protein, lysR family
CIHINEOD_00041 1.4e-24 akr5f 1.1.1.346 S reductase
CIHINEOD_00042 1.4e-121 akr5f 1.1.1.346 S Aldo/keto reductase family
CIHINEOD_00043 0.0 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
CIHINEOD_00044 3.6e-84 neo 2.7.1.87, 2.7.1.95 F Phosphotransferase enzyme family
CIHINEOD_00045 5.8e-21 neo 2.7.1.87, 2.7.1.95 F Phosphotransferase enzyme family
CIHINEOD_00046 1.3e-87 S Domain of unknown function (DUF4234)
CIHINEOD_00047 2.8e-254 tnpA L Transposase
CIHINEOD_00048 1e-303 3.2.1.45 GH30 G Glycosyl hydrolase family 30 TIM-barrel domain
CIHINEOD_00049 0.0 lacZ3 3.2.1.23 G Beta-galactosidase trimerisation domain
CIHINEOD_00050 3.1e-218 blt G MFS/sugar transport protein
CIHINEOD_00051 2.8e-122 K Bacterial regulatory proteins, tetR family
CIHINEOD_00052 1e-84 dps P Belongs to the Dps family
CIHINEOD_00053 9.1e-248 ytfL P Transporter associated domain
CIHINEOD_00054 2.2e-128 cah 4.2.1.1 P Reversible hydration of carbon dioxide
CIHINEOD_00055 2.4e-214 K helix_turn _helix lactose operon repressor
CIHINEOD_00056 2e-35
CIHINEOD_00057 2.4e-159 xylG 3.6.3.17 G ATPases associated with a variety of cellular activities
CIHINEOD_00058 1.5e-53
CIHINEOD_00059 1.5e-194 K helix_turn _helix lactose operon repressor
CIHINEOD_00060 8.5e-311 3.2.1.55 GH51 G arabinose metabolic process
CIHINEOD_00061 7.4e-305 araB 2.7.1.16, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
CIHINEOD_00062 5.1e-130 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
CIHINEOD_00063 1.9e-299 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
CIHINEOD_00064 9.1e-169 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
CIHINEOD_00065 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CIHINEOD_00066 2.5e-298 yjjP S Threonine/Serine exporter, ThrE
CIHINEOD_00067 2.8e-254 tnpA L Transposase
CIHINEOD_00068 1.2e-205 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
CIHINEOD_00069 1.6e-47 S Protein of unknown function (DUF3073)
CIHINEOD_00070 1.4e-80 I Sterol carrier protein
CIHINEOD_00071 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
CIHINEOD_00072 5.4e-36
CIHINEOD_00073 5.7e-129 gluP 3.4.21.105 S Rhomboid family
CIHINEOD_00074 2.2e-284 L ribosomal rna small subunit methyltransferase
CIHINEOD_00075 7.2e-37 crgA D Involved in cell division
CIHINEOD_00076 3.3e-141 S Bacterial protein of unknown function (DUF881)
CIHINEOD_00077 9.2e-225 srtA 3.4.22.70 M Sortase family
CIHINEOD_00078 3.1e-121 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
CIHINEOD_00079 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
CIHINEOD_00080 1.3e-193 T Protein tyrosine kinase
CIHINEOD_00081 2.2e-271 pbpA M penicillin-binding protein
CIHINEOD_00082 1.1e-290 rodA D Belongs to the SEDS family
CIHINEOD_00083 7.6e-267 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
CIHINEOD_00084 8e-62 fhaB T Inner membrane component of T3SS, cytoplasmic domain
CIHINEOD_00085 2.3e-130 fhaA T Protein of unknown function (DUF2662)
CIHINEOD_00086 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
CIHINEOD_00087 4.7e-127 yicL EG EamA-like transporter family
CIHINEOD_00088 3.1e-214 pldB 3.1.1.5 I Serine aminopeptidase, S33
CIHINEOD_00089 5.7e-58
CIHINEOD_00090 2.6e-180 rrmA 2.1.1.187 Q Methyltransferase domain
CIHINEOD_00091 3.1e-32 ytgB S Transglycosylase associated protein
CIHINEOD_00092 2.4e-29 ymgJ S Transglycosylase associated protein
CIHINEOD_00094 1.6e-279 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
CIHINEOD_00095 0.0 cadA P E1-E2 ATPase
CIHINEOD_00096 1.9e-285 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
CIHINEOD_00097 1.1e-115 3.8.1.2 S Haloacid dehalogenase-like hydrolase
CIHINEOD_00098 8.8e-308 S Sel1-like repeats.
CIHINEOD_00099 4.6e-279 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
CIHINEOD_00101 3.8e-179 htpX O Belongs to the peptidase M48B family
CIHINEOD_00102 4.8e-213 lppW 3.5.2.6 V Beta-lactamase
CIHINEOD_00103 2.5e-123 E SOS response associated peptidase (SRAP)
CIHINEOD_00104 1.1e-228 araJ EGP Major facilitator Superfamily
CIHINEOD_00105 1.1e-11 S NADPH-dependent FMN reductase
CIHINEOD_00106 7.7e-52 relB L RelB antitoxin
CIHINEOD_00107 4.9e-87 ogt 2.1.1.63, 3.2.2.21 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CIHINEOD_00108 1.7e-270 2.7.11.1 S cellulose binding
CIHINEOD_00109 1.1e-141 4.1.1.44 S Carboxymuconolactone decarboxylase family
CIHINEOD_00110 1.3e-86 4.1.1.44 S Cupin domain
CIHINEOD_00111 8.2e-190 S Dienelactone hydrolase family
CIHINEOD_00112 8.3e-162 K Bacterial regulatory helix-turn-helix protein, lysR family
CIHINEOD_00113 8.8e-195 C Aldo/keto reductase family
CIHINEOD_00115 3.8e-251 P nitric oxide dioxygenase activity
CIHINEOD_00116 9.3e-89 C Flavodoxin
CIHINEOD_00117 6.3e-40 K helix_turn_helix, mercury resistance
CIHINEOD_00118 2.8e-59 fldA C Flavodoxin
CIHINEOD_00119 6.9e-147 GM NmrA-like family
CIHINEOD_00120 7.4e-205 adh 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
CIHINEOD_00121 2e-166 K LysR substrate binding domain
CIHINEOD_00122 3.7e-254 3.5.1.104 G Polysaccharide deacetylase
CIHINEOD_00123 3e-195 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
CIHINEOD_00124 2.2e-251 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CIHINEOD_00125 1.2e-174 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CIHINEOD_00126 6.5e-63 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CIHINEOD_00127 3e-233 U Belongs to the binding-protein-dependent transport system permease family
CIHINEOD_00128 9.7e-159 livM U Belongs to the binding-protein-dependent transport system permease family
CIHINEOD_00129 5.3e-160 natA E Branched-chain amino acid ATP-binding cassette transporter
CIHINEOD_00130 1.6e-151 livF E ATPases associated with a variety of cellular activities
CIHINEOD_00131 1.1e-215 natB E Receptor family ligand binding region
CIHINEOD_00132 4.8e-193 K helix_turn _helix lactose operon repressor
CIHINEOD_00133 7.4e-299 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
CIHINEOD_00134 2.4e-295 G Transporter major facilitator family protein
CIHINEOD_00135 6.3e-107 natB E Receptor family ligand binding region
CIHINEOD_00136 8.4e-243 bccA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Biotin carboxylase C-terminal domain
CIHINEOD_00137 1.9e-183 4.2.1.48 S Domain of unknown function (DUF4392)
CIHINEOD_00138 2.3e-279 scrT G Transporter major facilitator family protein
CIHINEOD_00139 4.8e-93 S Acetyltransferase (GNAT) family
CIHINEOD_00140 2.7e-48 S Protein of unknown function (DUF1778)
CIHINEOD_00141 3.9e-15
CIHINEOD_00142 3.8e-257 yhjE EGP Sugar (and other) transporter
CIHINEOD_00143 1.1e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CIHINEOD_00145 0.0 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
CIHINEOD_00146 6.5e-220 E GDSL-like Lipase/Acylhydrolase family
CIHINEOD_00147 8e-284 bglA 3.2.1.21 G Glycosyl hydrolase family 1
CIHINEOD_00148 1e-136 G beta-mannosidase
CIHINEOD_00149 5.2e-187 K helix_turn _helix lactose operon repressor
CIHINEOD_00150 2.6e-115 S Protein of unknown function, DUF624
CIHINEOD_00151 8.9e-133
CIHINEOD_00152 3e-25
CIHINEOD_00153 3.3e-260 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
CIHINEOD_00154 3.1e-133 ybbL V ATPases associated with a variety of cellular activities
CIHINEOD_00155 1.9e-145 ybbM V Uncharacterised protein family (UPF0014)
CIHINEOD_00156 6e-277 aroP E aromatic amino acid transport protein AroP K03293
CIHINEOD_00158 1.1e-127 V ABC transporter
CIHINEOD_00159 0.0 V FtsX-like permease family
CIHINEOD_00160 6.4e-282 cycA E Amino acid permease
CIHINEOD_00161 4.6e-33 V efflux transmembrane transporter activity
CIHINEOD_00162 2.8e-19 MV MacB-like periplasmic core domain
CIHINEOD_00163 4.6e-305 M MacB-like periplasmic core domain
CIHINEOD_00164 9.3e-74 V ABC transporter, ATP-binding protein
CIHINEOD_00165 1.2e-106 ydgJ K helix_turn_helix multiple antibiotic resistance protein
CIHINEOD_00166 0.0 lmrA1 V ABC transporter, ATP-binding protein
CIHINEOD_00167 0.0 lmrA2 V ABC transporter transmembrane region
CIHINEOD_00168 4e-268 xynD 3.2.1.8, 3.5.1.104, 3.5.1.41 G Polysaccharide deacetylase
CIHINEOD_00169 6e-123 3.6.1.27 I Acid phosphatase homologues
CIHINEOD_00170 1.6e-114 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
CIHINEOD_00171 2.7e-73
CIHINEOD_00172 3.7e-219 natB E Receptor family ligand binding region
CIHINEOD_00173 9.5e-102 K Psort location Cytoplasmic, score 8.87
CIHINEOD_00174 0.0 pip S YhgE Pip domain protein
CIHINEOD_00175 0.0 pip S YhgE Pip domain protein
CIHINEOD_00176 2.5e-107 XK27_08585 S Hypothetical bacterial integral membrane protein (Trep_Strep)
CIHINEOD_00177 3.4e-132 XK26_04485 P Cobalt transport protein
CIHINEOD_00178 6.2e-282 G ATPases associated with a variety of cellular activities
CIHINEOD_00179 7.7e-182 adcA P ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
CIHINEOD_00180 3.9e-167 S esterase of the alpha-beta hydrolase superfamily
CIHINEOD_00181 5e-142 S esterase of the alpha-beta hydrolase superfamily
CIHINEOD_00182 1.2e-94
CIHINEOD_00184 2e-310 pepD E Peptidase family C69
CIHINEOD_00185 3.3e-121 icaR K Bacterial regulatory proteins, tetR family
CIHINEOD_00186 1.5e-224 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
CIHINEOD_00187 9e-237 amt U Ammonium Transporter Family
CIHINEOD_00188 4.5e-55 glnB K Nitrogen regulatory protein P-II
CIHINEOD_00189 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
CIHINEOD_00190 2.4e-38 K sequence-specific DNA binding
CIHINEOD_00191 9.8e-258 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
CIHINEOD_00192 1.8e-284 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
CIHINEOD_00193 9.7e-143 cobQ S CobB/CobQ-like glutamine amidotransferase domain
CIHINEOD_00194 1.7e-52 S granule-associated protein
CIHINEOD_00195 0.0 ubiB S ABC1 family
CIHINEOD_00196 1.1e-200 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
CIHINEOD_00197 1e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CIHINEOD_00198 2e-129
CIHINEOD_00199 7.3e-205 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
CIHINEOD_00200 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CIHINEOD_00201 9.6e-78 cpaE D bacterial-type flagellum organization
CIHINEOD_00202 1.3e-229 cpaF U Type II IV secretion system protein
CIHINEOD_00203 2.9e-107 U Type ii secretion system
CIHINEOD_00204 3.7e-111 U Type II secretion system (T2SS), protein F
CIHINEOD_00205 1.7e-39 S Protein of unknown function (DUF4244)
CIHINEOD_00206 6.5e-50 U TadE-like protein
CIHINEOD_00207 2.5e-75 S TIGRFAM helicase secretion neighborhood TadE-like protein
CIHINEOD_00208 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
CIHINEOD_00209 6.7e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CIHINEOD_00210 6.9e-136 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
CIHINEOD_00211 2.1e-97 askB 1.1.1.3, 2.7.2.4 E ACT domain
CIHINEOD_00212 1e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CIHINEOD_00213 5.4e-121
CIHINEOD_00214 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CIHINEOD_00215 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
CIHINEOD_00216 5.9e-216 ino1 5.5.1.4 I Myo-inositol-1-phosphate synthase
CIHINEOD_00217 4.1e-10 ino1 5.5.1.4 I Myo-inositol-1-phosphate synthase
CIHINEOD_00218 3.2e-220 3.6.1.27 I PAP2 superfamily
CIHINEOD_00219 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CIHINEOD_00220 2e-109 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CIHINEOD_00221 5e-211 holB 2.7.7.7 L DNA polymerase III
CIHINEOD_00222 8.6e-141 S Phosphatidylethanolamine-binding protein
CIHINEOD_00223 0.0 pepD E Peptidase family C69
CIHINEOD_00224 0.0 pepD E Peptidase family C69
CIHINEOD_00225 1.9e-222 S Domain of unknown function (DUF4143)
CIHINEOD_00226 4.1e-289 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
CIHINEOD_00227 6e-63 S Macrophage migration inhibitory factor (MIF)
CIHINEOD_00228 2.2e-198 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
CIHINEOD_00229 7.6e-100 S GtrA-like protein
CIHINEOD_00230 7.1e-175
CIHINEOD_00231 2.6e-123 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
CIHINEOD_00232 6.8e-262 EGP Major facilitator Superfamily
CIHINEOD_00233 6.2e-254 tnpA L Transposase
CIHINEOD_00234 1.4e-294 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CIHINEOD_00237 3.7e-251 S Calcineurin-like phosphoesterase
CIHINEOD_00238 5.6e-144 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
CIHINEOD_00239 4.5e-266
CIHINEOD_00240 2.3e-127 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CIHINEOD_00241 1.4e-41 QU41_18010 2.4.2.18 K Lrp/AsnC ligand binding domain
CIHINEOD_00242 1.6e-257 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
CIHINEOD_00243 1.1e-250 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CIHINEOD_00244 1.2e-159 plsC2 2.3.1.51 I Phosphate acyltransferases
CIHINEOD_00245 1.4e-160 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
CIHINEOD_00246 2.8e-218 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
CIHINEOD_00248 5.5e-113 S Domain of unknown function (DUF4854)
CIHINEOD_00249 7.4e-179 S CAAX protease self-immunity
CIHINEOD_00250 4.4e-144 M Mechanosensitive ion channel
CIHINEOD_00251 1.9e-115 K Bacterial regulatory proteins, tetR family
CIHINEOD_00252 1.1e-233 MA20_36090 S Psort location Cytoplasmic, score 8.87
CIHINEOD_00253 3.4e-163 S Putative ABC-transporter type IV
CIHINEOD_00254 2.9e-229 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
CIHINEOD_00255 0.0 S Psort location Cytoplasmic, score 8.87
CIHINEOD_00256 5.6e-308 S Psort location Cytoplasmic, score 8.87
CIHINEOD_00257 1.8e-198 yegV G pfkB family carbohydrate kinase
CIHINEOD_00258 2.9e-30 rpmB J Ribosomal L28 family
CIHINEOD_00259 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
CIHINEOD_00260 0.0 M Spy0128-like isopeptide containing domain
CIHINEOD_00261 8.4e-102 rsmD 2.1.1.171 L Conserved hypothetical protein 95
CIHINEOD_00262 4.8e-159 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
CIHINEOD_00263 2.7e-120 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CIHINEOD_00264 1.5e-46 CP_0960 S Belongs to the UPF0109 family
CIHINEOD_00265 7.9e-66 rpsP J Belongs to the bacterial ribosomal protein bS16 family
CIHINEOD_00266 0.0 lacZ 3.2.1.23 G Psort location Cytoplasmic, score 8.87
CIHINEOD_00267 9.6e-222 S Endonuclease/Exonuclease/phosphatase family
CIHINEOD_00268 1.5e-161 P Cation efflux family
CIHINEOD_00269 1.5e-265 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CIHINEOD_00270 0.0 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
CIHINEOD_00271 0.0 yjjK S ABC transporter
CIHINEOD_00272 3e-136 guaA1 6.3.5.2 F Peptidase C26
CIHINEOD_00273 3.4e-92 ilvN 2.2.1.6 E ACT domain
CIHINEOD_00274 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
CIHINEOD_00275 9.5e-141 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
CIHINEOD_00276 1.4e-24 rpmF J Belongs to the bacterial ribosomal protein bL32 family
CIHINEOD_00277 1.9e-112 yceD S Uncharacterized ACR, COG1399
CIHINEOD_00278 5.8e-121
CIHINEOD_00279 1.3e-87 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CIHINEOD_00280 1.4e-49 S Protein of unknown function (DUF3039)
CIHINEOD_00281 6e-196 yghZ C Aldo/keto reductase family
CIHINEOD_00282 8.5e-251 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CIHINEOD_00283 2.4e-46
CIHINEOD_00284 1.5e-135 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CIHINEOD_00285 8.2e-131 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CIHINEOD_00286 1e-245 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
CIHINEOD_00287 4e-184 S Auxin Efflux Carrier
CIHINEOD_00290 1.8e-218 manC 2.7.7.13, 5.3.1.8 M Mannose-6-phosphate isomerase
CIHINEOD_00291 0.0 pgi 5.3.1.9 G Belongs to the GPI family
CIHINEOD_00292 1e-60 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
CIHINEOD_00293 2.7e-137 lepB 3.4.21.89 U Belongs to the peptidase S26 family
CIHINEOD_00294 2.4e-144 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CIHINEOD_00295 9.7e-159 V ATPases associated with a variety of cellular activities
CIHINEOD_00296 8e-255 V Efflux ABC transporter, permease protein
CIHINEOD_00297 1.9e-172 dapE 3.5.1.18 E Peptidase dimerisation domain
CIHINEOD_00298 1.1e-236 dapE 3.5.1.18 E Peptidase dimerisation domain
CIHINEOD_00299 0.0 rne 3.1.26.12 J Ribonuclease E/G family
CIHINEOD_00300 5.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
CIHINEOD_00301 1.5e-39 rpmA J Ribosomal L27 protein
CIHINEOD_00302 4.3e-303
CIHINEOD_00303 7.9e-205 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CIHINEOD_00304 3.7e-232 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
CIHINEOD_00306 8.7e-34 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
CIHINEOD_00307 8.4e-134 nusG K Participates in transcription elongation, termination and antitermination
CIHINEOD_00308 2.3e-41 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CIHINEOD_00309 6e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
CIHINEOD_00310 8.4e-145 QT PucR C-terminal helix-turn-helix domain
CIHINEOD_00311 5.6e-169 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
CIHINEOD_00312 2.6e-104 bioY S BioY family
CIHINEOD_00313 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
CIHINEOD_00314 3.1e-303 pccB I Carboxyl transferase domain
CIHINEOD_00315 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
CIHINEOD_00316 5.9e-79 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
CIHINEOD_00318 2.6e-121
CIHINEOD_00319 3.8e-187 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
CIHINEOD_00320 2e-49 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CIHINEOD_00321 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
CIHINEOD_00322 2.3e-99 lemA S LemA family
CIHINEOD_00323 0.0 S Predicted membrane protein (DUF2207)
CIHINEOD_00324 4.1e-186 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CIHINEOD_00325 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CIHINEOD_00326 9.6e-79 nrdI F Probably involved in ribonucleotide reductase function
CIHINEOD_00327 2e-42 nrdI F Probably involved in ribonucleotide reductase function
CIHINEOD_00328 1.6e-168 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
CIHINEOD_00329 1.8e-300 yegQ O Peptidase family U32 C-terminal domain
CIHINEOD_00330 1e-226 yfiH Q Multi-copper polyphenol oxidoreductase laccase
CIHINEOD_00331 2.6e-149 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
CIHINEOD_00332 1e-133 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CIHINEOD_00333 8.1e-84 D nuclear chromosome segregation
CIHINEOD_00334 2.4e-269 pepC 3.4.22.40 E Peptidase C1-like family
CIHINEOD_00335 2.1e-218 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CIHINEOD_00336 0.0 I Psort location CytoplasmicMembrane, score 9.99
CIHINEOD_00337 2.2e-240 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CIHINEOD_00338 7.4e-121 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CIHINEOD_00339 1.6e-219 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
CIHINEOD_00340 3.3e-132 KT Transcriptional regulatory protein, C terminal
CIHINEOD_00341 3.2e-206 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
CIHINEOD_00342 8.5e-171 pstC P probably responsible for the translocation of the substrate across the membrane
CIHINEOD_00343 8.3e-174 pstA P Phosphate transport system permease
CIHINEOD_00344 8.9e-147 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CIHINEOD_00345 2.2e-249 pbuO S Permease family
CIHINEOD_00346 3.5e-163 P Zinc-uptake complex component A periplasmic
CIHINEOD_00347 2.1e-88 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CIHINEOD_00348 2.4e-44 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
CIHINEOD_00349 9.2e-263 T Forkhead associated domain
CIHINEOD_00350 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
CIHINEOD_00351 5.6e-39
CIHINEOD_00352 7.9e-103 flgA NO SAF
CIHINEOD_00353 6.8e-32 fmdB S Putative regulatory protein
CIHINEOD_00354 4e-141 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
CIHINEOD_00355 3.3e-121 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
CIHINEOD_00356 2.5e-196
CIHINEOD_00357 2.3e-47 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CIHINEOD_00361 1e-221 murB 1.3.1.98 M Cell wall formation
CIHINEOD_00362 6.6e-290 E aromatic amino acid transport protein AroP K03293
CIHINEOD_00363 7.6e-60 fdxA C 4Fe-4S binding domain
CIHINEOD_00364 6.8e-220 dapC E Aminotransferase class I and II
CIHINEOD_00365 2e-252 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CIHINEOD_00367 1.3e-190 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CIHINEOD_00368 2.8e-114 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
CIHINEOD_00369 3.9e-122
CIHINEOD_00370 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
CIHINEOD_00371 1.2e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CIHINEOD_00372 8.5e-63 rpsI J Belongs to the universal ribosomal protein uS9 family
CIHINEOD_00373 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
CIHINEOD_00374 6.7e-209 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
CIHINEOD_00375 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
CIHINEOD_00376 1.6e-190 K Psort location Cytoplasmic, score
CIHINEOD_00377 1.1e-152 ywiC S YwiC-like protein
CIHINEOD_00378 8e-51 rpsJ J Involved in the binding of tRNA to the ribosomes
CIHINEOD_00379 3.2e-118 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CIHINEOD_00380 6.8e-116 rplD J Forms part of the polypeptide exit tunnel
CIHINEOD_00381 2.6e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
CIHINEOD_00382 1.2e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CIHINEOD_00383 1.3e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CIHINEOD_00384 6.7e-57 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CIHINEOD_00385 3.9e-124 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CIHINEOD_00386 2e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CIHINEOD_00387 7e-37 rpmC J Belongs to the universal ribosomal protein uL29 family
CIHINEOD_00388 8.3e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CIHINEOD_00389 8.7e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CIHINEOD_00390 3e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CIHINEOD_00391 1.7e-105 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CIHINEOD_00392 3.1e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CIHINEOD_00393 1.9e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CIHINEOD_00394 2.4e-95 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CIHINEOD_00395 1.3e-58 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CIHINEOD_00396 8.2e-94 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CIHINEOD_00397 2.5e-23 rpmD J Ribosomal protein L30p/L7e
CIHINEOD_00398 7.4e-77 rplO J binds to the 23S rRNA
CIHINEOD_00399 1.5e-250 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
CIHINEOD_00400 3.2e-101 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
CIHINEOD_00401 1.2e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CIHINEOD_00402 6.5e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
CIHINEOD_00403 2.1e-61 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CIHINEOD_00404 5.7e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CIHINEOD_00405 5.2e-184 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CIHINEOD_00406 1e-70 rplQ J Ribosomal protein L17
CIHINEOD_00407 2.1e-148 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
CIHINEOD_00409 5.1e-162
CIHINEOD_00410 3.2e-195 nusA K Participates in both transcription termination and antitermination
CIHINEOD_00411 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CIHINEOD_00412 6.4e-74 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CIHINEOD_00413 5.9e-194 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CIHINEOD_00414 7.8e-233 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
CIHINEOD_00415 1.5e-275 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CIHINEOD_00416 1.9e-92
CIHINEOD_00418 1.8e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CIHINEOD_00419 3.5e-180 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CIHINEOD_00421 1.9e-242 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CIHINEOD_00422 4.4e-219 I Diacylglycerol kinase catalytic domain
CIHINEOD_00423 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CIHINEOD_00424 2.2e-290 S alpha beta
CIHINEOD_00425 9.6e-112 S Protein of unknown function (DUF4125)
CIHINEOD_00426 0.0 S Domain of unknown function (DUF4037)
CIHINEOD_00427 6e-126 degU K helix_turn_helix, Lux Regulon
CIHINEOD_00428 2e-269 tcsS3 KT PspC domain
CIHINEOD_00429 0.0 pspC KT PspC domain
CIHINEOD_00430 7.2e-102
CIHINEOD_00431 9.5e-225 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
CIHINEOD_00432 2.4e-130 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
CIHINEOD_00433 1.6e-28 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
CIHINEOD_00435 0.0 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
CIHINEOD_00436 2.2e-103
CIHINEOD_00437 1.4e-291 E Phospholipase B
CIHINEOD_00438 5.7e-266 pepC 3.4.22.40 E Peptidase C1-like family
CIHINEOD_00439 0.0 gadC E Amino acid permease
CIHINEOD_00440 9.2e-302 E Serine carboxypeptidase
CIHINEOD_00441 1.7e-274 puuP_1 E Amino acid permease
CIHINEOD_00442 9.9e-77 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
CIHINEOD_00443 3.4e-140 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CIHINEOD_00444 0.0 4.2.1.53 S MCRA family
CIHINEOD_00445 5.6e-64 3.5.1.10 C Zinc-binding dehydrogenase
CIHINEOD_00446 1.2e-123 1.6.5.5 C Zinc-binding dehydrogenase
CIHINEOD_00447 6e-282 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G Phosphomannose isomerase type I
CIHINEOD_00448 6.7e-22
CIHINEOD_00449 5.5e-224 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
CIHINEOD_00450 3.3e-121 phoU P Plays a role in the regulation of phosphate uptake
CIHINEOD_00451 1.6e-210 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CIHINEOD_00452 5.6e-173 usp 3.5.1.28 CBM50 S CHAP domain
CIHINEOD_00453 2.1e-98 M NlpC/P60 family
CIHINEOD_00454 2.4e-195 T Universal stress protein family
CIHINEOD_00455 5.9e-73 attW O OsmC-like protein
CIHINEOD_00456 1.1e-174 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CIHINEOD_00457 4.1e-132 folA 1.5.1.3 H dihydrofolate reductase
CIHINEOD_00458 1.2e-99 ptpA 3.1.3.48 T low molecular weight
CIHINEOD_00459 3.6e-201 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
CIHINEOD_00460 1.1e-161 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
CIHINEOD_00462 2.8e-183 XK27_05540 S DUF218 domain
CIHINEOD_00463 7.7e-188 3.1.3.5 S 5'-nucleotidase
CIHINEOD_00464 4.6e-108
CIHINEOD_00465 2.8e-293 L AAA ATPase domain
CIHINEOD_00466 1.1e-54 S Cutinase
CIHINEOD_00467 1.4e-228 S Uncharacterized protein conserved in bacteria (DUF2130)
CIHINEOD_00468 3.3e-294 S Psort location Cytoplasmic, score 8.87
CIHINEOD_00469 3e-145 S Domain of unknown function (DUF4194)
CIHINEOD_00470 0.0 S Psort location Cytoplasmic, score 8.87
CIHINEOD_00471 1.4e-236 S Psort location Cytoplasmic, score 8.87
CIHINEOD_00473 2.6e-64 yeaO K Protein of unknown function, DUF488
CIHINEOD_00474 3.3e-231 lacS G Psort location CytoplasmicMembrane, score 10.00
CIHINEOD_00475 2.5e-31 lacS G Psort location CytoplasmicMembrane, score 10.00
CIHINEOD_00476 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
CIHINEOD_00477 2.8e-185 lacR K Transcriptional regulator, LacI family
CIHINEOD_00478 5.7e-117 3.8.1.2 S Haloacid dehalogenase-like hydrolase
CIHINEOD_00479 5.8e-62
CIHINEOD_00480 7e-96 S Domain of unknown function (DUF4190)
CIHINEOD_00481 1.3e-77 S Domain of unknown function (DUF4190)
CIHINEOD_00482 3.4e-63 S Domain of unknown function (DUF4190)
CIHINEOD_00483 9.4e-205 G Bacterial extracellular solute-binding protein
CIHINEOD_00484 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
CIHINEOD_00485 6.3e-174 G ABC transporter permease
CIHINEOD_00486 1.8e-173 G Binding-protein-dependent transport system inner membrane component
CIHINEOD_00487 1.7e-187 K Periplasmic binding protein domain
CIHINEOD_00491 1.3e-182 3.4.14.13 M Glycosyltransferase like family 2
CIHINEOD_00492 1.2e-294 S AI-2E family transporter
CIHINEOD_00493 2.9e-243 epsG M Glycosyl transferase family 21
CIHINEOD_00494 1.3e-162 natA V ATPases associated with a variety of cellular activities
CIHINEOD_00495 0.0
CIHINEOD_00496 5.3e-237 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
CIHINEOD_00497 5.9e-216 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
CIHINEOD_00498 2.5e-98 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
CIHINEOD_00499 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CIHINEOD_00500 3e-143 folK 2.5.1.15, 2.6.1.85, 2.7.6.3, 3.5.4.16, 4.1.2.25 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CIHINEOD_00501 2.3e-113 S Protein of unknown function (DUF3180)
CIHINEOD_00502 2.6e-174 tesB I Thioesterase-like superfamily
CIHINEOD_00503 6.5e-296 yjjK S ATP-binding cassette protein, ChvD family
CIHINEOD_00504 3.2e-66 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
CIHINEOD_00505 1e-256 metY 2.5.1.49 H Psort location Cytoplasmic, score 9.98
CIHINEOD_00506 1.3e-111 ykoE S ABC-type cobalt transport system, permease component
CIHINEOD_00507 2.2e-133
CIHINEOD_00509 1.3e-173
CIHINEOD_00510 1.4e-35 rpmE J Binds the 23S rRNA
CIHINEOD_00511 4e-272 xylA 5.3.1.5 G Belongs to the xylose isomerase family
CIHINEOD_00512 0.0 G Belongs to the glycosyl hydrolase 43 family
CIHINEOD_00513 6.5e-90 K Bacterial regulatory proteins, lacI family
CIHINEOD_00516 0.0 tetP J Elongation factor G, domain IV
CIHINEOD_00517 1.9e-286 aaxC E Amino acid permease
CIHINEOD_00518 6e-117
CIHINEOD_00519 1.2e-27
CIHINEOD_00520 2.4e-311 E ABC transporter, substrate-binding protein, family 5
CIHINEOD_00521 1.6e-191 EGP Major Facilitator Superfamily
CIHINEOD_00522 1.9e-94 pspA KT PspA/IM30 family
CIHINEOD_00523 4.4e-207 S COG1512 Beta-propeller domains of methanol dehydrogenase type
CIHINEOD_00524 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CIHINEOD_00525 2.3e-23
CIHINEOD_00526 2e-146 ptp3 3.1.3.48 T Tyrosine phosphatase family
CIHINEOD_00527 4.3e-46
CIHINEOD_00528 5.6e-11
CIHINEOD_00529 0.0 V ABC transporter transmembrane region
CIHINEOD_00530 0.0 V ABC transporter, ATP-binding protein
CIHINEOD_00531 3.2e-98 K MarR family
CIHINEOD_00532 3.7e-102 S NADPH-dependent FMN reductase
CIHINEOD_00533 1.7e-98 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
CIHINEOD_00536 5.8e-49
CIHINEOD_00537 2.1e-204
CIHINEOD_00538 0.0 cas3 L CRISPR-associated helicase Cas3
CIHINEOD_00539 1.3e-156
CIHINEOD_00540 5.9e-160
CIHINEOD_00541 1.2e-222 S CRISPR-associated protein GSU0053 (Cas_GSU0053)
CIHINEOD_00542 9.4e-17 cas2 L CRISPR associated protein Cas2
CIHINEOD_00543 0.0 cas4 3.1.12.1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
CIHINEOD_00544 6.5e-256 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
CIHINEOD_00545 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
CIHINEOD_00546 9.4e-101 yiiE S Protein of unknown function (DUF1211)
CIHINEOD_00547 3.5e-62 yiiE S Protein of unknown function (DUF1304)
CIHINEOD_00548 5.4e-121
CIHINEOD_00549 2e-148 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CIHINEOD_00550 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
CIHINEOD_00551 2.7e-233 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CIHINEOD_00552 6.8e-45 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CIHINEOD_00553 5.9e-191 S Endonuclease/Exonuclease/phosphatase family
CIHINEOD_00555 1.9e-127 tmp1 S Domain of unknown function (DUF4391)
CIHINEOD_00556 1.5e-172 aspB E Aminotransferase class-V
CIHINEOD_00557 5.6e-100 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
CIHINEOD_00558 9e-300 S zinc finger
CIHINEOD_00559 1.9e-269 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
CIHINEOD_00560 2.7e-125 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
CIHINEOD_00561 7.2e-253 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CIHINEOD_00562 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
CIHINEOD_00563 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CIHINEOD_00564 5.7e-166 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CIHINEOD_00565 1.7e-134 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
CIHINEOD_00566 3.5e-250 G Major Facilitator Superfamily
CIHINEOD_00567 3e-133 K -acetyltransferase
CIHINEOD_00568 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
CIHINEOD_00569 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
CIHINEOD_00570 1.9e-269 KLT Protein tyrosine kinase
CIHINEOD_00571 0.0 S Fibronectin type 3 domain
CIHINEOD_00572 7e-130 S ATPase family associated with various cellular activities (AAA)
CIHINEOD_00573 5.4e-188 S Protein of unknown function DUF58
CIHINEOD_00574 0.0 E Transglutaminase-like superfamily
CIHINEOD_00575 3.6e-93 B Belongs to the OprB family
CIHINEOD_00576 9.6e-104 T Forkhead associated domain
CIHINEOD_00577 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CIHINEOD_00578 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CIHINEOD_00579 3.5e-50
CIHINEOD_00580 9.4e-186 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
CIHINEOD_00581 1.2e-128 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
CIHINEOD_00582 1.4e-251 S UPF0210 protein
CIHINEOD_00583 5.5e-43 gcvR T Belongs to the UPF0237 family
CIHINEOD_00584 7.9e-149 srtC 3.4.22.70 M Sortase family
CIHINEOD_00586 1.5e-233 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
CIHINEOD_00587 9.1e-258 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
CIHINEOD_00588 1.3e-143 glpR K DeoR C terminal sensor domain
CIHINEOD_00589 5.7e-194 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
CIHINEOD_00590 7.5e-227 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
CIHINEOD_00591 3.2e-222 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
CIHINEOD_00592 8.1e-290 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
CIHINEOD_00593 7.9e-118 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
CIHINEOD_00594 1e-139 glxR K helix_turn_helix, cAMP Regulatory protein
CIHINEOD_00595 3.3e-222 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
CIHINEOD_00596 1.1e-75 J TM2 domain
CIHINEOD_00597 4.2e-20
CIHINEOD_00598 4.2e-176
CIHINEOD_00599 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
CIHINEOD_00600 4.1e-289 S Uncharacterized conserved protein (DUF2183)
CIHINEOD_00601 8.4e-72 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
CIHINEOD_00602 1.3e-215 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
CIHINEOD_00603 5e-173 mhpC I Alpha/beta hydrolase family
CIHINEOD_00604 4e-86 F Domain of unknown function (DUF4916)
CIHINEOD_00605 4.6e-67 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
CIHINEOD_00606 2e-178 S G5
CIHINEOD_00607 1.5e-286 rfbP M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
CIHINEOD_00608 3.3e-77
CIHINEOD_00609 1.1e-272 S Predicted membrane protein (DUF2142)
CIHINEOD_00610 2.7e-188 rfbJ M Glycosyl transferase family 2
CIHINEOD_00611 0.0 pflA S Protein of unknown function (DUF4012)
CIHINEOD_00612 5.3e-172 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CIHINEOD_00613 3e-289 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
CIHINEOD_00614 4.9e-206 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
CIHINEOD_00615 3.9e-184 GT2 M Glycosyl transferase family 2
CIHINEOD_00616 1.1e-267 S Psort location CytoplasmicMembrane, score 9.99
CIHINEOD_00617 1.3e-170 S Glycosyl transferase family 2
CIHINEOD_00618 5.3e-192 S Glycosyltransferase like family 2
CIHINEOD_00619 4.9e-254
CIHINEOD_00620 5.3e-172 GT2 S Glycosyl transferase family 2
CIHINEOD_00621 1.5e-146 M Domain of unknown function (DUF4422)
CIHINEOD_00622 3.7e-165 rfbN GT2 S Glycosyltransferase like family 2
CIHINEOD_00623 3.2e-183 MA20_43635 M Capsular polysaccharide synthesis protein
CIHINEOD_00624 4.2e-239 1.1.1.22 M UDP binding domain
CIHINEOD_00625 3.1e-254 S Psort location CytoplasmicMembrane, score 9.99
CIHINEOD_00626 4.1e-197 M transferase activity, transferring glycosyl groups
CIHINEOD_00627 9.8e-163 GT2 S Glycosyl transferase family 2
CIHINEOD_00628 1.6e-288 rfbP M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
CIHINEOD_00629 1.5e-45
CIHINEOD_00630 0.0 EGP Major facilitator Superfamily
CIHINEOD_00631 1.3e-241 mntH P H( )-stimulated, divalent metal cation uptake system
CIHINEOD_00632 1.1e-135 L Protein of unknown function (DUF1524)
CIHINEOD_00633 4e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
CIHINEOD_00634 1e-119 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
CIHINEOD_00635 2.5e-222 lspL 5.1.3.6 M epimerase dehydratase
CIHINEOD_00636 1.3e-84 pssD M Oligosaccharide biosynthesis protein Alg14 like
CIHINEOD_00637 8.9e-92 pssE M Glycosyltransferase family 28 C-terminal domain
CIHINEOD_00638 2.6e-185 GT2 S Glycosyl transferase family 2
CIHINEOD_00639 2.6e-160 GT2 S Glycosyl transferase family 2
CIHINEOD_00640 3e-204 S EpsG family
CIHINEOD_00641 0.0 cydD V ABC transporter transmembrane region
CIHINEOD_00642 1.5e-261 fadD 6.2.1.3 I long-chain-fatty acid CoA ligase
CIHINEOD_00643 6e-76 fadD 6.2.1.3 I long-chain-fatty acid CoA ligase
CIHINEOD_00644 2.8e-40 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
CIHINEOD_00645 4.3e-197 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
CIHINEOD_00646 1.3e-102 3.1.3.48 T Low molecular weight phosphatase family
CIHINEOD_00647 0.0 pflA S Protein of unknown function (DUF4012)
CIHINEOD_00648 7.2e-254 wcoI DM Psort location CytoplasmicMembrane, score
CIHINEOD_00649 3.2e-57
CIHINEOD_00650 2.8e-254 tnpA L Transposase
CIHINEOD_00651 2.5e-23 cas3 L DEAD-like helicases superfamily
CIHINEOD_00652 6.1e-185 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
CIHINEOD_00653 6.9e-245 hom 1.1.1.3 E Homoserine dehydrogenase
CIHINEOD_00654 3.7e-301 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
CIHINEOD_00655 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
CIHINEOD_00656 1.2e-290 3.2.1.45 GH30 G Glycosyl hydrolase family 30 TIM-barrel domain
CIHINEOD_00657 2.1e-67 psp1 3.5.99.10 J Endoribonuclease L-PSP
CIHINEOD_00658 1e-108 P Binding-protein-dependent transport system inner membrane component
CIHINEOD_00659 9.9e-185 cbpA 2.4.1.20 GT36 G Glycosyl hydrolase 36 superfamily, catalytic domain
CIHINEOD_00661 2.6e-172 trxA2 O Tetratricopeptide repeat
CIHINEOD_00662 2.2e-182
CIHINEOD_00663 1.1e-181
CIHINEOD_00664 1.4e-154 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
CIHINEOD_00665 9.1e-141 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
CIHINEOD_00666 2e-49 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
CIHINEOD_00667 3.5e-285 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CIHINEOD_00668 7.7e-166 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CIHINEOD_00669 2.7e-310 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CIHINEOD_00670 8.8e-153 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CIHINEOD_00671 1e-61 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CIHINEOD_00672 1.4e-31 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CIHINEOD_00673 1e-145 atpB C it plays a direct role in the translocation of protons across the membrane
CIHINEOD_00674 1.1e-205 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CIHINEOD_00675 6.6e-246 EGP Major facilitator Superfamily
CIHINEOD_00676 2.4e-183 rihB 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
CIHINEOD_00678 3e-212
CIHINEOD_00679 2.9e-27
CIHINEOD_00680 5.1e-66
CIHINEOD_00681 2.4e-141 D ftsk spoiiie
CIHINEOD_00682 6.5e-121 S Plasmid replication protein
CIHINEOD_00683 1.4e-36
CIHINEOD_00684 4.4e-224 L HNH endonuclease
CIHINEOD_00685 1.4e-219 2.1.1.72 H Adenine-specific methyltransferase EcoRI
CIHINEOD_00686 2.9e-229 L Phage integrase family
CIHINEOD_00687 3.6e-265 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
CIHINEOD_00688 1.1e-206 3.2.1.4, 3.2.1.78 GH26,GH5,GH9 G hydrolase family 5
CIHINEOD_00689 5.8e-176 yfdV S Membrane transport protein
CIHINEOD_00690 0.0 oxc 4.1.1.8 EH Thiamine pyrophosphate enzyme, central domain
CIHINEOD_00691 1.2e-286 eriC P Voltage gated chloride channel
CIHINEOD_00692 0.0 M domain protein
CIHINEOD_00693 0.0 K RNA polymerase II activating transcription factor binding
CIHINEOD_00694 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
CIHINEOD_00695 1.4e-92 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CIHINEOD_00696 9e-153
CIHINEOD_00697 5.1e-139 KT Transcriptional regulatory protein, C terminal
CIHINEOD_00698 7.7e-140 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CIHINEOD_00699 1.8e-303 E Bacterial extracellular solute-binding proteins, family 5 Middle
CIHINEOD_00700 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
CIHINEOD_00701 5.4e-104 K helix_turn_helix ASNC type
CIHINEOD_00702 1e-63 tyrA 5.4.99.5 E Chorismate mutase type II
CIHINEOD_00703 0.0 S domain protein
CIHINEOD_00704 2.8e-311 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CIHINEOD_00705 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
CIHINEOD_00706 7.4e-52 S Protein of unknown function (DUF2469)
CIHINEOD_00707 5.1e-198 2.3.1.57 J Acetyltransferase (GNAT) domain
CIHINEOD_00708 6e-285 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CIHINEOD_00709 3.2e-289 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
CIHINEOD_00710 4.5e-24 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CIHINEOD_00711 4.2e-151 S ABC-type transport system involved in multi-copper enzyme maturation permease component
CIHINEOD_00712 3.2e-112 V ABC transporter
CIHINEOD_00713 1e-153 spoU 2.1.1.185 J RNA methyltransferase TrmH family
CIHINEOD_00714 3.4e-115 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CIHINEOD_00715 2.2e-260 ydbA 3.6.3.4, 3.6.3.54 P E1-E2 ATPase
CIHINEOD_00716 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
CIHINEOD_00717 4.5e-157 fahA Q Fumarylacetoacetate (FAA) hydrolase family
CIHINEOD_00718 7.3e-81
CIHINEOD_00719 3.1e-306 M domain protein
CIHINEOD_00720 0.0 Q von Willebrand factor (vWF) type A domain
CIHINEOD_00721 4.6e-191 3.4.22.70 M Sortase family
CIHINEOD_00722 1.7e-151 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CIHINEOD_00723 1.1e-197 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
CIHINEOD_00724 3.1e-167 M Protein of unknown function (DUF3152)
CIHINEOD_00725 7.6e-132 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
CIHINEOD_00729 5.8e-125 T Pfam Adenylate and Guanylate cyclase catalytic domain
CIHINEOD_00730 2.2e-73 rplI J Binds to the 23S rRNA
CIHINEOD_00731 1.2e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CIHINEOD_00732 2.2e-87 ssb1 L Single-stranded DNA-binding protein
CIHINEOD_00733 5.9e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
CIHINEOD_00734 5.3e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CIHINEOD_00735 1.4e-173 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CIHINEOD_00736 4.6e-269 EGP Major Facilitator Superfamily
CIHINEOD_00737 5e-168 iunH2 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
CIHINEOD_00738 1.1e-197 K helix_turn _helix lactose operon repressor
CIHINEOD_00739 3e-41 relB L RelB antitoxin
CIHINEOD_00740 2.5e-258 nadE 3.5.1.53, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CIHINEOD_00741 7.3e-100 nadE 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CIHINEOD_00743 2.6e-95 iolT EGP Major facilitator Superfamily
CIHINEOD_00744 7.8e-44
CIHINEOD_00745 9.5e-141 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
CIHINEOD_00746 4e-69 S Protein of unknown function (DUF4235)
CIHINEOD_00747 1.9e-115 G Phosphoglycerate mutase family
CIHINEOD_00748 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
CIHINEOD_00749 1e-256 amyE G Bacterial extracellular solute-binding protein
CIHINEOD_00750 1.1e-253 tnpA L Transposase
CIHINEOD_00751 1.3e-251 S Protein of unknown function DUF262
CIHINEOD_00752 8.7e-124 maa 2.3.1.18, 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
CIHINEOD_00753 1.7e-35
CIHINEOD_00754 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CIHINEOD_00755 0.0 ctpE P E1-E2 ATPase
CIHINEOD_00756 7e-104
CIHINEOD_00757 7.2e-258 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CIHINEOD_00758 1.7e-137 S Protein of unknown function (DUF3159)
CIHINEOD_00759 3.3e-155 S Protein of unknown function (DUF3710)
CIHINEOD_00760 4.8e-170 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
CIHINEOD_00761 9.8e-118
CIHINEOD_00762 0.0 dppD P Belongs to the ABC transporter superfamily
CIHINEOD_00763 4.4e-172 dppC EP N-terminal TM domain of oligopeptide transport permease C
CIHINEOD_00764 4.7e-155 dppB EP Binding-protein-dependent transport system inner membrane component
CIHINEOD_00765 0.0 E ABC transporter, substrate-binding protein, family 5
CIHINEOD_00766 6.2e-179 xerC D Belongs to the 'phage' integrase family. XerC subfamily
CIHINEOD_00767 3.4e-149 V ABC transporter, ATP-binding protein
CIHINEOD_00768 0.0 MV MacB-like periplasmic core domain
CIHINEOD_00769 4e-40
CIHINEOD_00770 5.5e-211 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
CIHINEOD_00771 2.8e-218 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
CIHINEOD_00772 3.3e-109
CIHINEOD_00773 0.0 typA T Elongation factor G C-terminus
CIHINEOD_00774 4.8e-260 naiP U Sugar (and other) transporter
CIHINEOD_00775 2.6e-157 nrtR 3.6.1.55 F NUDIX hydrolase
CIHINEOD_00776 1.2e-152 soj D CobQ CobB MinD ParA nucleotide binding domain protein
CIHINEOD_00777 4.8e-168 xerD D recombinase XerD
CIHINEOD_00778 1.5e-62 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CIHINEOD_00779 6.1e-25 rpmI J Ribosomal protein L35
CIHINEOD_00780 4.9e-101 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CIHINEOD_00781 6.8e-150 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
CIHINEOD_00782 7.4e-208 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
CIHINEOD_00783 8.5e-90 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CIHINEOD_00784 6.5e-179 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CIHINEOD_00785 1.1e-197 galM 5.1.3.3 G Aldose 1-epimerase
CIHINEOD_00786 6e-54
CIHINEOD_00787 1.5e-127 sigH K Belongs to the sigma-70 factor family. ECF subfamily
CIHINEOD_00788 4.6e-296 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CIHINEOD_00789 1.1e-200 V Acetyltransferase (GNAT) domain
CIHINEOD_00790 1.1e-297 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
CIHINEOD_00791 5e-116 gerE KT cheY-homologous receiver domain
CIHINEOD_00792 2.9e-186 2.7.13.3 T Histidine kinase
CIHINEOD_00793 2.1e-102
CIHINEOD_00794 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
CIHINEOD_00795 8.8e-98 3.6.1.55 F NUDIX domain
CIHINEOD_00796 4.8e-224 GK ROK family
CIHINEOD_00797 1.6e-168 2.7.1.4 G pfkB family carbohydrate kinase
CIHINEOD_00798 1.3e-84 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
CIHINEOD_00799 4.2e-211 int8 L Phage integrase family
CIHINEOD_00805 1.6e-28
CIHINEOD_00806 6.4e-229 T AAA domain
CIHINEOD_00811 0.0 xkdG S Caudovirus prohead serine protease
CIHINEOD_00814 0.0 P Belongs to the ABC transporter superfamily
CIHINEOD_00815 1.2e-206 dppC EP Binding-protein-dependent transport system inner membrane component
CIHINEOD_00816 8.8e-193 dppB EP Binding-protein-dependent transport system inner membrane component
CIHINEOD_00817 3.1e-59 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
CIHINEOD_00818 2.9e-160 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
CIHINEOD_00819 1e-222 ftsQ 6.3.2.4 D Cell division protein FtsQ
CIHINEOD_00820 8.6e-287 murC 6.3.2.8 M Belongs to the MurCDEF family
CIHINEOD_00821 2.1e-163 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CIHINEOD_00822 1.4e-256 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
CIHINEOD_00823 3.9e-273 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CIHINEOD_00824 6.3e-207 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CIHINEOD_00825 6.7e-260 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
CIHINEOD_00826 8.7e-159 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CIHINEOD_00827 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
CIHINEOD_00828 9.5e-92 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
CIHINEOD_00829 3.1e-195 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
CIHINEOD_00830 9.3e-86 mraZ K Belongs to the MraZ family
CIHINEOD_00831 0.0 L DNA helicase
CIHINEOD_00832 2.7e-227 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CIHINEOD_00833 4.7e-96 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CIHINEOD_00834 2.1e-10 M LysM domain
CIHINEOD_00835 3.7e-128 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CIHINEOD_00836 2.1e-166 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CIHINEOD_00837 2.8e-174 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
CIHINEOD_00838 1e-279 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CIHINEOD_00839 1.2e-117 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
CIHINEOD_00840 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
CIHINEOD_00841 2.6e-263 glnA2 6.3.1.2 E glutamine synthetase
CIHINEOD_00842 1.2e-186 S Uncharacterized protein conserved in bacteria (DUF2252)
CIHINEOD_00843 4.4e-132 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
CIHINEOD_00844 2.4e-121 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CIHINEOD_00845 1.6e-124
CIHINEOD_00846 2.3e-110 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
CIHINEOD_00847 2.4e-225 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CIHINEOD_00848 1.6e-255 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CIHINEOD_00849 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
CIHINEOD_00851 2.2e-176 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
CIHINEOD_00852 1.7e-96 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CIHINEOD_00853 4.4e-33 tccB2 V DivIVA protein
CIHINEOD_00854 9.9e-43 yggT S YGGT family
CIHINEOD_00855 1.3e-79 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
CIHINEOD_00856 1e-221 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CIHINEOD_00857 2.6e-249 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CIHINEOD_00858 2.6e-296 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
CIHINEOD_00859 2.6e-97 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
CIHINEOD_00860 8.1e-293 thiE 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
CIHINEOD_00861 5.1e-60 S Thiamine-binding protein
CIHINEOD_00862 1e-201 K helix_turn _helix lactose operon repressor
CIHINEOD_00863 3.6e-249 lacY P LacY proton/sugar symporter
CIHINEOD_00864 0.0 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
CIHINEOD_00865 5.4e-147 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
CIHINEOD_00866 1.2e-194 P NMT1/THI5 like
CIHINEOD_00867 4.7e-235 iunH1 3.2.2.1 F nucleoside hydrolase
CIHINEOD_00869 1.7e-153 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CIHINEOD_00870 5.7e-132 recO L Involved in DNA repair and RecF pathway recombination
CIHINEOD_00871 0.0 I acetylesterase activity
CIHINEOD_00872 2.4e-228 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CIHINEOD_00873 7e-220 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
CIHINEOD_00874 1.2e-283 2.7.11.1 NU Tfp pilus assembly protein FimV
CIHINEOD_00876 4.1e-81
CIHINEOD_00877 9.1e-74 S Protein of unknown function (DUF3052)
CIHINEOD_00878 1.2e-182 lon T Belongs to the peptidase S16 family
CIHINEOD_00879 1.7e-259 S Zincin-like metallopeptidase
CIHINEOD_00880 3.4e-302 uvrD2 3.6.4.12 L DNA helicase
CIHINEOD_00881 2.7e-266 mphA S Aminoglycoside phosphotransferase
CIHINEOD_00882 2.5e-17 S Protein of unknown function (DUF3107)
CIHINEOD_00883 1.7e-167 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
CIHINEOD_00884 2.7e-120 S Vitamin K epoxide reductase
CIHINEOD_00885 2.3e-175 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
CIHINEOD_00886 1.5e-146 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
CIHINEOD_00887 3.1e-161 S Patatin-like phospholipase
CIHINEOD_00888 9.7e-137 XK27_08050 O prohibitin homologues
CIHINEOD_00889 1.6e-163 cjaA ET Bacterial periplasmic substrate-binding proteins
CIHINEOD_00890 1.8e-159 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
CIHINEOD_00891 2.7e-123 glnP E Binding-protein-dependent transport system inner membrane component
CIHINEOD_00892 4.1e-113 papP E Binding-protein-dependent transport system inner membrane component
CIHINEOD_00893 1.2e-232 mtnE 2.6.1.83 E Aminotransferase class I and II
CIHINEOD_00894 1.1e-110 metI P Psort location CytoplasmicMembrane, score 9.99
CIHINEOD_00895 8.3e-221 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CIHINEOD_00896 1e-162 metQ M NLPA lipoprotein
CIHINEOD_00897 3.9e-192 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CIHINEOD_00898 6e-128 K acetyltransferase
CIHINEOD_00899 4.1e-57 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
CIHINEOD_00900 3.6e-36 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
CIHINEOD_00902 6.3e-237 glf 5.4.99.9 M UDP-galactopyranose mutase
CIHINEOD_00903 1.9e-208 2.4.1.303 GT2 M Glycosyl transferase family 2
CIHINEOD_00905 2.9e-198 TTHA0885 S Glycosyltransferase, group 2 family protein
CIHINEOD_00906 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
CIHINEOD_00907 1.4e-75 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
CIHINEOD_00908 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
CIHINEOD_00909 0.0 glfT 2.4.1.288 GT2 S Glycosyltransferase like family 2
CIHINEOD_00910 5.4e-177 lytC 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
CIHINEOD_00911 0.0 lytC 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
CIHINEOD_00912 7.9e-187 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
CIHINEOD_00913 1.4e-56 S Leucine-rich repeat (LRR) protein
CIHINEOD_00914 1.1e-100 M hydrolase, family 25
CIHINEOD_00915 5.9e-134
CIHINEOD_00916 4.7e-265 S Polysaccharide pyruvyl transferase
CIHINEOD_00917 1.6e-271 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
CIHINEOD_00918 1.1e-150 rgpC U Transport permease protein
CIHINEOD_00919 0.0 2.4.1.288 GT2 S Glycosyltransferase like family 2
CIHINEOD_00921 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CIHINEOD_00922 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CIHINEOD_00923 0.0 S Psort location Cytoplasmic, score 8.87
CIHINEOD_00924 9.6e-250 V ABC transporter permease
CIHINEOD_00925 1.6e-194 V ABC transporter
CIHINEOD_00926 3.2e-152 3.6.1.11, 3.6.1.40 T HD domain
CIHINEOD_00927 3.3e-169 S Glutamine amidotransferase domain
CIHINEOD_00928 0.0 kup P Transport of potassium into the cell
CIHINEOD_00929 1.7e-184 tatD L TatD related DNase
CIHINEOD_00930 0.0 rafA 3.2.1.22 G Psort location Cytoplasmic, score 8.87
CIHINEOD_00931 3.6e-118
CIHINEOD_00932 0.0 yknV V ABC transporter
CIHINEOD_00933 0.0 mdlA2 V ABC transporter
CIHINEOD_00934 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CIHINEOD_00935 1.3e-130
CIHINEOD_00936 6.6e-54
CIHINEOD_00937 1.1e-172 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CIHINEOD_00938 0.0 pmt 2.4.1.109 GT39 O C-terminal four TMM region of protein-O-mannosyltransferase
CIHINEOD_00939 6.2e-159 I alpha/beta hydrolase fold
CIHINEOD_00940 4e-136 dedA S SNARE associated Golgi protein
CIHINEOD_00942 2.7e-145 S GyrI-like small molecule binding domain
CIHINEOD_00943 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
CIHINEOD_00944 6.2e-114 K Bacterial regulatory proteins, tetR family
CIHINEOD_00945 5.6e-129 S HAD hydrolase, family IA, variant 3
CIHINEOD_00946 5.4e-92 hspR K transcriptional regulator, MerR family
CIHINEOD_00947 2.1e-167 dnaJ1 O DnaJ molecular chaperone homology domain
CIHINEOD_00948 1.2e-94 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CIHINEOD_00949 0.0 dnaK O Heat shock 70 kDa protein
CIHINEOD_00951 1.3e-193 K Psort location Cytoplasmic, score
CIHINEOD_00952 1.8e-144 traX S TraX protein
CIHINEOD_00953 3.1e-147 S HAD-hyrolase-like
CIHINEOD_00954 0.0 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
CIHINEOD_00955 7.3e-175 malG G Binding-protein-dependent transport system inner membrane component
CIHINEOD_00956 2.5e-269 malF G Binding-protein-dependent transport system inner membrane component
CIHINEOD_00957 8.7e-237 malE G Bacterial extracellular solute-binding protein
CIHINEOD_00958 0.0 malL 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
CIHINEOD_00959 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
CIHINEOD_00960 1.1e-107 S Protein of unknown function, DUF624
CIHINEOD_00961 6.1e-154 rafG G ABC transporter permease
CIHINEOD_00962 8.8e-156 msmF G Binding-protein-dependent transport system inner membrane component
CIHINEOD_00963 1.1e-181 K Psort location Cytoplasmic, score
CIHINEOD_00964 2.7e-09 amyE G Bacterial extracellular solute-binding protein
CIHINEOD_00965 7.8e-252 amyE G Bacterial extracellular solute-binding protein
CIHINEOD_00966 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
CIHINEOD_00967 1.2e-47 S Protein of unknown function (DUF3073)
CIHINEOD_00968 1.2e-205 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
CIHINEOD_00969 2.8e-254 tnpA L Transposase
CIHINEOD_00970 1.6e-151 S Protein of unknown function DUF262
CIHINEOD_00971 3.1e-116 K helix_turn_helix, Lux Regulon
CIHINEOD_00972 1.1e-212 T Histidine kinase
CIHINEOD_00973 4.2e-186 V ATPases associated with a variety of cellular activities
CIHINEOD_00974 7.5e-236 V ABC-2 family transporter protein
CIHINEOD_00975 6.1e-233 V ABC-2 family transporter protein
CIHINEOD_00976 8.5e-198 dapB 1.4.1.12, 1.4.1.16, 1.4.1.26 S Dihydrodipicolinate reductase, N-terminus
CIHINEOD_00978 1.3e-142 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
CIHINEOD_00979 1.1e-291 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CIHINEOD_00980 6.8e-195 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CIHINEOD_00981 0.0 ftsK D FtsK SpoIIIE family protein
CIHINEOD_00982 7.7e-120 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CIHINEOD_00983 4.2e-107 cinA 3.5.1.42 S Belongs to the CinA family
CIHINEOD_00984 8.6e-88 K Helix-turn-helix XRE-family like proteins
CIHINEOD_00985 1e-43 S Protein of unknown function (DUF3046)
CIHINEOD_00986 1e-207 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CIHINEOD_00987 9.8e-112 recX S Modulates RecA activity
CIHINEOD_00989 7.1e-124 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CIHINEOD_00990 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
CIHINEOD_00991 6.9e-195 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CIHINEOD_00992 2.2e-99
CIHINEOD_00993 4.9e-139 plsC2 2.3.1.51 I Phosphate acyltransferases
CIHINEOD_00994 0.0 pknL 2.7.11.1 KLT PASTA
CIHINEOD_00995 2.7e-202 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
CIHINEOD_00996 4e-130
CIHINEOD_00997 1.6e-186 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
CIHINEOD_00998 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
CIHINEOD_00999 2.3e-226 2.4.1.345 GT4 M Glycosyl transferase 4-like domain
CIHINEOD_01000 1.2e-219 G Major Facilitator Superfamily
CIHINEOD_01001 4.7e-69 G Major facilitator superfamily
CIHINEOD_01002 2.2e-68 G Major facilitator superfamily
CIHINEOD_01003 0.0 lhr L DEAD DEAH box helicase
CIHINEOD_01004 3e-28 glcU G Sugar transport protein
CIHINEOD_01005 9.7e-186 glcU G Sugar transport protein
CIHINEOD_01006 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
CIHINEOD_01007 2.5e-215 S Type I phosphodiesterase / nucleotide pyrophosphatase
CIHINEOD_01008 1.6e-244 S Protein of unknown function (DUF3071)
CIHINEOD_01009 1.8e-47 S Domain of unknown function (DUF4193)
CIHINEOD_01010 1.2e-82 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
CIHINEOD_01011 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CIHINEOD_01012 2.4e-16 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CIHINEOD_01013 1.6e-102 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CIHINEOD_01014 8.6e-179 metQ P NLPA lipoprotein
CIHINEOD_01015 6.2e-238 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CIHINEOD_01016 1.3e-120 metI P Binding-protein-dependent transport system inner membrane component
CIHINEOD_01017 2e-227 S Peptidase dimerisation domain
CIHINEOD_01018 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CIHINEOD_01019 6.2e-28
CIHINEOD_01020 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
CIHINEOD_01021 9.5e-177 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CIHINEOD_01022 9.3e-258 rnd 3.1.13.5 J 3'-5' exonuclease
CIHINEOD_01023 1.4e-219 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
CIHINEOD_01024 1.3e-252 clcA_2 P Voltage gated chloride channel
CIHINEOD_01025 1.3e-113 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
CIHINEOD_01026 4.3e-124 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
CIHINEOD_01027 1.1e-250 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CIHINEOD_01030 4.2e-244 patB 4.4.1.8 E Aminotransferase, class I II
CIHINEOD_01031 3.7e-252 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CIHINEOD_01032 4.7e-151 fmt2 3.2.2.10 S Belongs to the LOG family
CIHINEOD_01033 1.3e-122 safC S O-methyltransferase
CIHINEOD_01034 8.8e-173 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
CIHINEOD_01035 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
CIHINEOD_01036 1.3e-218 dprA 5.99.1.2 LU DNA recombination-mediator protein A
CIHINEOD_01037 1.1e-276 comM O Magnesium chelatase, subunit ChlI C-terminal
CIHINEOD_01038 2.2e-87 yraN L Belongs to the UPF0102 family
CIHINEOD_01039 8.6e-167 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
CIHINEOD_01040 3.7e-254 metY 2.5.1.49 E Aminotransferase class-V
CIHINEOD_01041 1.8e-292 3.6.3.24 P AAA domain, putative AbiEii toxin, Type IV TA system
CIHINEOD_01042 1.9e-96 ecfT P transmembrane transporter activity
CIHINEOD_01043 8.1e-171 V ABC transporter, ATP-binding protein
CIHINEOD_01044 0.0 MV MacB-like periplasmic core domain
CIHINEOD_01045 1.4e-119 K helix_turn_helix, Lux Regulon
CIHINEOD_01046 0.0 tcsS2 T Histidine kinase
CIHINEOD_01047 1.3e-270 pip 3.4.11.5 S alpha/beta hydrolase fold
CIHINEOD_01048 6.5e-145 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CIHINEOD_01049 1e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
CIHINEOD_01050 2.1e-58 S Cupin 2, conserved barrel domain protein
CIHINEOD_01051 2.8e-42
CIHINEOD_01052 2.1e-215 lipA I Hydrolase, alpha beta domain protein
CIHINEOD_01053 8.2e-260 rutG F Permease family
CIHINEOD_01054 4.9e-199 MA20_14895 S Conserved hypothetical protein 698
CIHINEOD_01055 1.7e-308 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
CIHINEOD_01056 2.2e-148 S Belongs to the short-chain dehydrogenases reductases (SDR) family
CIHINEOD_01057 0.0 pacS 3.6.3.54 P E1-E2 ATPase
CIHINEOD_01058 7.2e-194 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CIHINEOD_01059 1.4e-251 brnQ U Component of the transport system for branched-chain amino acids
CIHINEOD_01060 1.5e-39 pepE 3.4.13.21 E Peptidase family S51
CIHINEOD_01061 6.1e-282 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CIHINEOD_01062 4.8e-148 pgl 3.1.1.31 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
CIHINEOD_01063 8.8e-181 opcA G Glucose-6-phosphate dehydrogenase subunit
CIHINEOD_01064 0.0 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CIHINEOD_01065 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
CIHINEOD_01066 7.2e-40 feoA P FeoA
CIHINEOD_01067 1.2e-280 aspA 4.3.1.1 E Fumarase C C-terminus
CIHINEOD_01068 1.1e-80 F Nucleoside 2-deoxyribosyltransferase
CIHINEOD_01069 3.9e-81 K Winged helix DNA-binding domain
CIHINEOD_01071 6.3e-99 S AAA domain, putative AbiEii toxin, Type IV TA system
CIHINEOD_01072 9.4e-72 V (ABC) transporter
CIHINEOD_01073 5.8e-32 V ABC transporter transmembrane region
CIHINEOD_01074 0.0 cstA T 5TM C-terminal transporter carbon starvation CstA
CIHINEOD_01075 4.5e-15 ybdD S Selenoprotein, putative
CIHINEOD_01076 6.1e-225 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
CIHINEOD_01077 0.0 S Uncharacterised protein family (UPF0182)
CIHINEOD_01078 7.1e-110 2.3.1.183 M Acetyltransferase (GNAT) domain
CIHINEOD_01079 4.6e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
CIHINEOD_01080 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CIHINEOD_01081 1.4e-192 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CIHINEOD_01082 9.8e-129 ssuB P ATPases associated with a variety of cellular activities
CIHINEOD_01083 4.6e-177 P NMT1-like family
CIHINEOD_01084 1.1e-164 ssuC U Binding-protein-dependent transport system inner membrane component
CIHINEOD_01085 2e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CIHINEOD_01086 5.6e-98 divIC D Septum formation initiator
CIHINEOD_01087 1.4e-110 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
CIHINEOD_01088 2.6e-170 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
CIHINEOD_01090 1e-105
CIHINEOD_01091 2.2e-287 sdaA 4.3.1.17 E Serine dehydratase alpha chain
CIHINEOD_01092 1.1e-74 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
CIHINEOD_01093 1.2e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CIHINEOD_01094 8.8e-135 yplQ S Haemolysin-III related
CIHINEOD_01095 1.7e-284 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
CIHINEOD_01096 1.9e-46 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
CIHINEOD_01097 1.5e-247 D FtsK/SpoIIIE family
CIHINEOD_01098 4.3e-112 K Cell envelope-related transcriptional attenuator domain
CIHINEOD_01099 4.6e-34 K Cell envelope-related transcriptional attenuator domain
CIHINEOD_01100 5.4e-238 K Cell envelope-related transcriptional attenuator domain
CIHINEOD_01101 0.0 S Glycosyl transferase, family 2
CIHINEOD_01102 6.8e-93 MA20_14025 U Binding-protein-dependent transport system inner membrane component
CIHINEOD_01103 3.3e-158 MA20_14020 P Binding-protein-dependent transport system inner membrane component
CIHINEOD_01104 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
CIHINEOD_01105 0.0 3.1.1.53 G Glycosyl hydrolase family 2, sugar binding domain protein
CIHINEOD_01106 2.3e-236 CE10 I Belongs to the type-B carboxylesterase lipase family
CIHINEOD_01107 0.0 G candidate polyfunctional acetylxylan esterase b-xylosidase A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein K01238
CIHINEOD_01108 1.7e-290 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
CIHINEOD_01109 3.6e-219 xylR GK ROK family
CIHINEOD_01110 8.6e-36 rpmE J Binds the 23S rRNA
CIHINEOD_01111 4.9e-167 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CIHINEOD_01112 3.7e-176 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
CIHINEOD_01113 2.6e-115 ywlC 2.7.7.87 J Belongs to the SUA5 family
CIHINEOD_01114 1.3e-197 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
CIHINEOD_01115 2.2e-290 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
CIHINEOD_01116 5.7e-123 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
CIHINEOD_01117 2.7e-157 supH S Sucrose-6F-phosphate phosphohydrolase
CIHINEOD_01118 1.6e-277 recD2 3.6.4.12 L PIF1-like helicase
CIHINEOD_01119 2.5e-74
CIHINEOD_01120 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
CIHINEOD_01121 1.2e-134 L Single-strand binding protein family
CIHINEOD_01122 6.4e-26 pepO 3.4.24.71 O Peptidase family M13
CIHINEOD_01123 0.0 pepO 3.4.24.71 O Peptidase family M13
CIHINEOD_01124 5.7e-104 S Short repeat of unknown function (DUF308)
CIHINEOD_01125 2e-130 map 3.4.11.18 E Methionine aminopeptidase
CIHINEOD_01126 2.2e-251 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
CIHINEOD_01127 8.6e-84 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CIHINEOD_01128 2.1e-169 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
CIHINEOD_01129 5.1e-204 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CIHINEOD_01130 3.9e-227 ftsE D Cell division ATP-binding protein FtsE
CIHINEOD_01131 9.4e-164 ftsX D Part of the ABC transporter FtsEX involved in cellular division
CIHINEOD_01132 3.3e-184 usp 3.5.1.28 CBM50 D CHAP domain protein
CIHINEOD_01133 4.2e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
CIHINEOD_01134 2.3e-154 pknD ET ABC transporter, substrate-binding protein, family 3
CIHINEOD_01135 1.9e-167 pknD ET ABC transporter, substrate-binding protein, family 3
CIHINEOD_01136 4.4e-151 yecS E Binding-protein-dependent transport system inner membrane component
CIHINEOD_01137 1.1e-153 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
CIHINEOD_01138 1e-181 K Psort location Cytoplasmic, score
CIHINEOD_01139 1.4e-127 K helix_turn_helix, Lux Regulon
CIHINEOD_01140 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
CIHINEOD_01141 5.2e-144 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
CIHINEOD_01142 3.2e-68
CIHINEOD_01143 1.1e-136 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
CIHINEOD_01144 0.0 E ABC transporter, substrate-binding protein, family 5
CIHINEOD_01145 7.8e-169 P Binding-protein-dependent transport system inner membrane component
CIHINEOD_01146 1.5e-155 EP Binding-protein-dependent transport system inner membrane component
CIHINEOD_01147 1.7e-140 P ATPases associated with a variety of cellular activities
CIHINEOD_01148 3.6e-140 sapF E ATPases associated with a variety of cellular activities
CIHINEOD_01149 1.4e-220 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
CIHINEOD_01150 1e-190 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
CIHINEOD_01151 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
CIHINEOD_01152 2.2e-173 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
CIHINEOD_01153 6.4e-107 J Acetyltransferase (GNAT) domain
CIHINEOD_01156 1.2e-38 M1-431 S Protein of unknown function (DUF1706)
CIHINEOD_01157 8.1e-22 M1-431 S Protein of unknown function (DUF1706)
CIHINEOD_01159 1.2e-58
CIHINEOD_01160 2.1e-64
CIHINEOD_01161 2.6e-73 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
CIHINEOD_01162 0.0 KL Domain of unknown function (DUF3427)
CIHINEOD_01163 3.6e-63 mloA S Fic/DOC family
CIHINEOD_01164 0.0 S Protein of unknown function (DUF1524)
CIHINEOD_01165 4.4e-94 gepA S Protein of unknown function (DUF4065)
CIHINEOD_01166 3.1e-92 doc S Fic/DOC family
CIHINEOD_01167 1.2e-88 XK27_03610 K Acetyltransferase (GNAT) domain
CIHINEOD_01168 3e-142 S 3-oxo-5-alpha-steroid 4-dehydrogenase
CIHINEOD_01169 7e-228 gldA 1.1.1.1, 1.1.1.6 C Iron-containing alcohol dehydrogenase
CIHINEOD_01170 6.6e-95 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
CIHINEOD_01171 5.8e-102 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CIHINEOD_01172 1.1e-261 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CIHINEOD_01173 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
CIHINEOD_01174 3.7e-221 ybiR P Citrate transporter
CIHINEOD_01176 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CIHINEOD_01177 2.8e-85 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CIHINEOD_01178 6.3e-226 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CIHINEOD_01179 4.8e-72 zur P Belongs to the Fur family
CIHINEOD_01180 0.0 lysX S Uncharacterised conserved protein (DUF2156)
CIHINEOD_01181 9.1e-242 S Putative esterase
CIHINEOD_01182 2.2e-240 purD 6.3.4.13 F Belongs to the GARS family
CIHINEOD_01183 3.3e-197 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
CIHINEOD_01184 3e-303 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CIHINEOD_01185 5.7e-280 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
CIHINEOD_01186 1.7e-72
CIHINEOD_01187 7.3e-215 S 50S ribosome-binding GTPase
CIHINEOD_01188 6.9e-101
CIHINEOD_01189 2.7e-89 S Pyridoxamine 5'-phosphate oxidase
CIHINEOD_01190 1.4e-107 2.7.1.196, 2.7.1.205 K sequence-specific DNA binding
CIHINEOD_01192 1e-226
CIHINEOD_01193 2.8e-126
CIHINEOD_01194 2.1e-68
CIHINEOD_01195 1.8e-107
CIHINEOD_01196 9.9e-209 S Short C-terminal domain
CIHINEOD_01197 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
CIHINEOD_01198 8.6e-139 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
CIHINEOD_01199 8.9e-234 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
CIHINEOD_01200 1.7e-234 M Glycosyl transferase 4-like domain
CIHINEOD_01201 9.4e-197 ltaE 4.1.2.48 E Beta-eliminating lyase
CIHINEOD_01203 7.9e-61 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CIHINEOD_01204 1.7e-56 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
CIHINEOD_01205 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CIHINEOD_01206 1.8e-231 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CIHINEOD_01207 7.7e-123 1.14.14.5 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CIHINEOD_01208 2.6e-95
CIHINEOD_01209 5.1e-104 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CIHINEOD_01210 9.5e-80 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CIHINEOD_01211 2.8e-240 carA 6.3.5.5 F Belongs to the CarA family
CIHINEOD_01212 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CIHINEOD_01213 8.9e-181 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
CIHINEOD_01214 1.2e-114 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
CIHINEOD_01215 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
CIHINEOD_01216 4.2e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
CIHINEOD_01217 3.1e-215 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CIHINEOD_01218 2.5e-255 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
CIHINEOD_01219 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CIHINEOD_01220 1.7e-184 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CIHINEOD_01221 3.5e-86 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
CIHINEOD_01222 6.3e-128 apl 3.1.3.1 S SNARE associated Golgi protein
CIHINEOD_01223 1.2e-291 arc O AAA ATPase forming ring-shaped complexes
CIHINEOD_01224 3.3e-310 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
CIHINEOD_01225 2.4e-172 hisN 3.1.3.25 G Inositol monophosphatase family
CIHINEOD_01226 2.5e-30 pup S Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
CIHINEOD_01227 5e-292 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
CIHINEOD_01228 6.2e-42 hup L Belongs to the bacterial histone-like protein family
CIHINEOD_01229 0.0 S Lysylphosphatidylglycerol synthase TM region
CIHINEOD_01230 3e-281 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
CIHINEOD_01231 2.1e-293 S PGAP1-like protein
CIHINEOD_01233 3.6e-87
CIHINEOD_01234 9.3e-181 S von Willebrand factor (vWF) type A domain
CIHINEOD_01235 6.3e-196 S von Willebrand factor (vWF) type A domain
CIHINEOD_01236 4.5e-83
CIHINEOD_01237 9.8e-180 S Protein of unknown function DUF58
CIHINEOD_01238 4.2e-192 moxR S ATPase family associated with various cellular activities (AAA)
CIHINEOD_01239 1.5e-140 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CIHINEOD_01240 3.7e-80 S LytR cell envelope-related transcriptional attenuator
CIHINEOD_01241 3.7e-31 cspA K 'Cold-shock' DNA-binding domain
CIHINEOD_01242 3.5e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
CIHINEOD_01243 6.5e-42 S Proteins of 100 residues with WXG
CIHINEOD_01244 5e-134
CIHINEOD_01245 3.4e-132 KT Response regulator receiver domain protein
CIHINEOD_01246 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
CIHINEOD_01247 1.2e-79 cspB K 'Cold-shock' DNA-binding domain
CIHINEOD_01248 8.2e-210 S Protein of unknown function (DUF3027)
CIHINEOD_01249 2.2e-53
CIHINEOD_01250 3.9e-27
CIHINEOD_01251 5.6e-183 uspA T Belongs to the universal stress protein A family
CIHINEOD_01252 0.0 clpC O ATPase family associated with various cellular activities (AAA)
CIHINEOD_01253 2.3e-73 clpC O ATPase family associated with various cellular activities (AAA)
CIHINEOD_01254 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CIHINEOD_01255 8.7e-259 hisS 6.1.1.21 J Histidyl-tRNA synthetase
CIHINEOD_01256 3.7e-228 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
CIHINEOD_01257 9.6e-149 aroD S Serine aminopeptidase, S33
CIHINEOD_01258 3e-142 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
CIHINEOD_01259 2.1e-154 gluB ET Belongs to the bacterial solute-binding protein 3 family
CIHINEOD_01260 5.2e-111 gluC E Binding-protein-dependent transport system inner membrane component
CIHINEOD_01261 2.1e-202 gluD E Binding-protein-dependent transport system inner membrane component
CIHINEOD_01262 9.8e-188 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
CIHINEOD_01263 0.0 L DEAD DEAH box helicase
CIHINEOD_01264 7.2e-262 rarA L Recombination factor protein RarA
CIHINEOD_01265 5.7e-267 EGP Major facilitator Superfamily
CIHINEOD_01266 0.0 fadD 6.2.1.3 I AMP-binding enzyme
CIHINEOD_01267 2.5e-200 L Transposase, Mutator family
CIHINEOD_01269 1.4e-308
CIHINEOD_01270 1.3e-142 E Psort location Cytoplasmic, score 8.87
CIHINEOD_01271 2.4e-65 S Zincin-like metallopeptidase
CIHINEOD_01272 4.9e-72 yccF S Inner membrane component domain
CIHINEOD_01273 1.1e-141 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CIHINEOD_01274 2.7e-46 yhbY J CRS1_YhbY
CIHINEOD_01275 8.6e-164 yvgN 1.1.1.346 S Aldo/keto reductase family
CIHINEOD_01276 0.0 ecfA GP ABC transporter, ATP-binding protein
CIHINEOD_01277 9.9e-98 ecfA GP ABC transporter, ATP-binding protein
CIHINEOD_01278 1.3e-134 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
CIHINEOD_01279 1.7e-223 E Aminotransferase class I and II
CIHINEOD_01280 4e-150 bioM P ATPases associated with a variety of cellular activities
CIHINEOD_01281 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CIHINEOD_01282 0.0 S Tetratricopeptide repeat
CIHINEOD_01283 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CIHINEOD_01284 3.2e-206 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
CIHINEOD_01285 2.6e-109 ykoE S ABC-type cobalt transport system, permease component
CIHINEOD_01286 7e-283 glnA 6.3.1.2 E glutamine synthetase
CIHINEOD_01287 3.6e-148 S Domain of unknown function (DUF4191)
CIHINEOD_01288 3.4e-280 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CIHINEOD_01289 2.9e-73 S Protein of unknown function (DUF3043)
CIHINEOD_01290 9.7e-266 argE E Peptidase dimerisation domain
CIHINEOD_01291 1.3e-212 2.7.13.3 T Histidine kinase
CIHINEOD_01292 2.1e-44
CIHINEOD_01293 8.2e-162 V N-Acetylmuramoyl-L-alanine amidase
CIHINEOD_01294 1.3e-226 ytrE V lipoprotein transporter activity
CIHINEOD_01295 3.2e-107 ykoE S ABC-type cobalt transport system, permease component
CIHINEOD_01296 0.0 cbiQ P ATPases associated with a variety of cellular activities
CIHINEOD_01297 4.8e-131 V ABC transporter, ATP-binding protein
CIHINEOD_01298 3.4e-218 V FtsX-like permease family
CIHINEOD_01299 7.1e-16 V FtsX-like permease family
CIHINEOD_01300 8.7e-170 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CIHINEOD_01301 2.3e-177 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CIHINEOD_01302 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
CIHINEOD_01303 1.8e-147
CIHINEOD_01304 4.2e-203 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CIHINEOD_01305 5.1e-207 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
CIHINEOD_01306 3.3e-180 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
CIHINEOD_01307 3.4e-241 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
CIHINEOD_01308 2.9e-184 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CIHINEOD_01309 1.4e-90 argR K Regulates arginine biosynthesis genes
CIHINEOD_01310 3.2e-239 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
CIHINEOD_01311 3e-284 argH 4.3.2.1 E argininosuccinate lyase
CIHINEOD_01312 9.5e-155 IQ Enoyl-(Acyl carrier protein) reductase
CIHINEOD_01313 6.2e-90 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
CIHINEOD_01314 1.4e-256 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CIHINEOD_01315 2.2e-158 L Tetratricopeptide repeat
CIHINEOD_01316 1.5e-194 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
CIHINEOD_01317 5.4e-144 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
CIHINEOD_01318 6.7e-273 trkB P Cation transport protein
CIHINEOD_01319 2.7e-117 trkA P TrkA-N domain
CIHINEOD_01320 5.6e-183 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CIHINEOD_01321 0.0 recN L May be involved in recombinational repair of damaged DNA
CIHINEOD_01322 3.3e-129 S Haloacid dehalogenase-like hydrolase
CIHINEOD_01323 1.5e-288 thrC 4.2.3.1 E Threonine synthase N terminus
CIHINEOD_01324 3.5e-236 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CIHINEOD_01325 1.9e-115
CIHINEOD_01326 7.8e-134 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CIHINEOD_01327 1.8e-187 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CIHINEOD_01329 1e-262 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CIHINEOD_01330 4.2e-71 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
CIHINEOD_01331 8e-122 gpmB 3.1.3.73, 3.1.3.85 G Phosphoglycerate mutase family
CIHINEOD_01334 8.3e-72 pdxH S Pfam:Pyridox_oxidase
CIHINEOD_01335 3e-161 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
CIHINEOD_01336 1.2e-169 corA P CorA-like Mg2+ transporter protein
CIHINEOD_01337 6.1e-168 ET Bacterial periplasmic substrate-binding proteins
CIHINEOD_01338 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
CIHINEOD_01339 8.6e-118 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
CIHINEOD_01340 0.0 comE S Competence protein
CIHINEOD_01341 3.5e-177 holA 2.7.7.7 L DNA polymerase III delta subunit
CIHINEOD_01342 8e-114 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
CIHINEOD_01343 9.2e-158 yeaZ 2.3.1.234 O Glycoprotease family
CIHINEOD_01344 7.5e-91 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
CIHINEOD_01345 3.6e-196 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CIHINEOD_01347 1.9e-89
CIHINEOD_01349 3.6e-61
CIHINEOD_01350 4.9e-103 M Peptidase family M23
CIHINEOD_01351 2.5e-278 G ABC transporter substrate-binding protein
CIHINEOD_01352 9.7e-241 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
CIHINEOD_01353 6.2e-210 guaB 1.1.1.205 F IMP dehydrogenase family protein
CIHINEOD_01354 1.4e-19
CIHINEOD_01355 1.5e-297 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
CIHINEOD_01356 8.3e-87 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
CIHINEOD_01357 1.9e-161 rpsB J Belongs to the universal ribosomal protein uS2 family
CIHINEOD_01358 7.5e-139 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CIHINEOD_01359 1.3e-134 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
CIHINEOD_01360 1.2e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
CIHINEOD_01361 5.5e-175 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
CIHINEOD_01362 1.2e-230 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
CIHINEOD_01363 1.4e-104 K WHG domain
CIHINEOD_01364 8.4e-114 nodI V ATPases associated with a variety of cellular activities
CIHINEOD_01365 2.2e-134 S ABC-2 type transporter
CIHINEOD_01366 3.9e-139 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
CIHINEOD_01367 3.3e-76 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CIHINEOD_01368 1.5e-299 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CIHINEOD_01369 8.8e-115 ung2 3.2.2.27 L Uracil DNA glycosylase superfamily
CIHINEOD_01372 0.0 trpB 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
CIHINEOD_01373 6.4e-162 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
CIHINEOD_01374 7.1e-183 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CIHINEOD_01375 4.5e-123 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
CIHINEOD_01376 2.2e-41 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
CIHINEOD_01377 1.2e-157 hisG 2.4.2.17 F ATP phosphoribosyltransferase
CIHINEOD_01378 1.2e-109 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CIHINEOD_01379 8.7e-176 S Bacterial protein of unknown function (DUF881)
CIHINEOD_01380 4.8e-33 sbp S Protein of unknown function (DUF1290)
CIHINEOD_01381 3.2e-153 S Bacterial protein of unknown function (DUF881)
CIHINEOD_01382 1.1e-74 garA T Inner membrane component of T3SS, cytoplasmic domain
CIHINEOD_01383 3.1e-133 K helix_turn_helix, mercury resistance
CIHINEOD_01384 5e-69
CIHINEOD_01385 1.2e-64 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CIHINEOD_01386 8.3e-66 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CIHINEOD_01387 7.4e-140 pgp 3.1.3.18 S HAD-hyrolase-like
CIHINEOD_01388 3.9e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
CIHINEOD_01389 0.0 helY L DEAD DEAH box helicase
CIHINEOD_01390 5.8e-36
CIHINEOD_01391 0.0 pafB K WYL domain
CIHINEOD_01392 9.1e-283 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
CIHINEOD_01394 1.1e-212 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
CIHINEOD_01395 2.8e-163 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
CIHINEOD_01396 1.7e-145 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
CIHINEOD_01397 2e-167 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
CIHINEOD_01398 5.7e-22
CIHINEOD_01399 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
CIHINEOD_01400 2.1e-244
CIHINEOD_01401 3.4e-166 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CIHINEOD_01402 1.5e-222 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
CIHINEOD_01403 1.7e-102 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CIHINEOD_01404 1.4e-53 yajC U Preprotein translocase subunit
CIHINEOD_01405 5e-204 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
CIHINEOD_01406 1.7e-108 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
CIHINEOD_01407 2.5e-101 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
CIHINEOD_01408 3.6e-129 yebC K transcriptional regulatory protein
CIHINEOD_01409 8.2e-190 pimA 2.4.1.345 GT4 M Glycosyl transferases group 1
CIHINEOD_01410 1.9e-194 htrB 2.3.1.241, 2.3.1.265 M Bacterial lipid A biosynthesis acyltransferase
CIHINEOD_01411 1.1e-116 pgsA1 2.7.8.11, 2.7.8.5 I CDP-alcohol phosphatidyltransferase
CIHINEOD_01412 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CIHINEOD_01413 1.7e-98 S ATPases associated with a variety of cellular activities
CIHINEOD_01415 1.4e-95 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
CIHINEOD_01416 1.4e-23
CIHINEOD_01422 2.3e-158 S PAC2 family
CIHINEOD_01423 2.6e-150 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
CIHINEOD_01424 4.2e-160 G Fructosamine kinase
CIHINEOD_01425 2.8e-218 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
CIHINEOD_01426 3e-201 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
CIHINEOD_01427 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
CIHINEOD_01428 1.4e-201 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CIHINEOD_01429 1.3e-66 S PFAM Pentapeptide repeats (8 copies)
CIHINEOD_01430 4e-231 yugH 2.6.1.1 E Aminotransferase class I and II
CIHINEOD_01431 4.6e-91 alaR K helix_turn_helix ASNC type
CIHINEOD_01432 8.7e-309 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
CIHINEOD_01433 1.1e-160 S Sucrose-6F-phosphate phosphohydrolase
CIHINEOD_01434 4.7e-25 secG U Preprotein translocase SecG subunit
CIHINEOD_01435 9.5e-152 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
CIHINEOD_01436 5.9e-143 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
CIHINEOD_01437 4.3e-175 whiA K May be required for sporulation
CIHINEOD_01438 6e-174 rapZ S Displays ATPase and GTPase activities
CIHINEOD_01439 9.8e-177 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
CIHINEOD_01440 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
CIHINEOD_01441 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
CIHINEOD_01442 7e-32 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
CIHINEOD_01443 9.8e-180 wcoO
CIHINEOD_01444 2.1e-99 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
CIHINEOD_01445 2.7e-122 S Phospholipase/Carboxylesterase
CIHINEOD_01446 4.1e-300 ybiT S ABC transporter
CIHINEOD_01447 1.9e-195 cat P Cation efflux family
CIHINEOD_01448 2.2e-145 4.1.1.44 S Carboxymuconolactone decarboxylase family
CIHINEOD_01449 6.4e-184 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
CIHINEOD_01450 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CIHINEOD_01451 2e-108 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
CIHINEOD_01452 0.0 trxB1 1.8.1.9 C Thioredoxin domain
CIHINEOD_01453 5e-173 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
CIHINEOD_01454 1.1e-123 3.8.1.2 S Haloacid dehalogenase-like hydrolase
CIHINEOD_01455 5.4e-112 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
CIHINEOD_01456 1.2e-182 draG O ADP-ribosylglycohydrolase
CIHINEOD_01457 2.6e-58 ytfH K HxlR-like helix-turn-helix
CIHINEOD_01458 2.8e-51 3.6.1.55 L NUDIX domain
CIHINEOD_01459 8.9e-80 2.3.1.1 K Psort location Cytoplasmic, score 8.87
CIHINEOD_01460 1.9e-124 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CIHINEOD_01461 7.7e-188 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
CIHINEOD_01462 3.5e-157 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
CIHINEOD_01463 4.5e-177 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
CIHINEOD_01464 9.1e-283 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
CIHINEOD_01465 2e-73 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
CIHINEOD_01466 4.6e-188 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
CIHINEOD_01467 3.1e-89 yneG S Domain of unknown function (DUF4186)
CIHINEOD_01468 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
CIHINEOD_01469 1.4e-158 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
CIHINEOD_01470 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CIHINEOD_01471 1.5e-100 sixA 3.6.1.55 T Phosphoglycerate mutase family
CIHINEOD_01472 2.7e-199 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
CIHINEOD_01473 3.4e-160 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
CIHINEOD_01474 7.8e-246 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
CIHINEOD_01475 2.6e-88 bcp 1.11.1.15 O Redoxin
CIHINEOD_01476 4.2e-80
CIHINEOD_01477 1.7e-306 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
CIHINEOD_01478 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
CIHINEOD_01479 2.8e-262 hemN H Involved in the biosynthesis of porphyrin-containing compound
CIHINEOD_01480 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
CIHINEOD_01481 3.4e-34 rpsT J Binds directly to 16S ribosomal RNA
CIHINEOD_01482 5.2e-139 S UPF0126 domain
CIHINEOD_01483 5.1e-228 ilvE 2.6.1.42 E Amino-transferase class IV
CIHINEOD_01484 5e-108 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CIHINEOD_01485 1.3e-195 S alpha beta
CIHINEOD_01486 1.8e-254 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
CIHINEOD_01487 1.2e-46 pntA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
CIHINEOD_01488 9.7e-203 pntAA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
CIHINEOD_01489 0.0 fadD 6.2.1.3 I AMP-binding enzyme
CIHINEOD_01490 3.4e-183 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CIHINEOD_01491 8.4e-249 corC S CBS domain
CIHINEOD_01492 2.5e-103 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CIHINEOD_01493 1.6e-213 phoH T PhoH-like protein
CIHINEOD_01494 2.5e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
CIHINEOD_01495 3.2e-144 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
CIHINEOD_01497 2.8e-165 spoU 2.1.1.185 J SpoU rRNA Methylase family
CIHINEOD_01498 3.1e-132 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
CIHINEOD_01499 1.6e-214 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CIHINEOD_01500 3.5e-92 yitW S Iron-sulfur cluster assembly protein
CIHINEOD_01501 8.9e-104 iscU C SUF system FeS assembly protein, NifU family
CIHINEOD_01502 3.5e-241 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CIHINEOD_01503 2.3e-142 sufC O FeS assembly ATPase SufC
CIHINEOD_01504 5.5e-228 sufD O FeS assembly protein SufD
CIHINEOD_01505 1.5e-214 sufB O FeS assembly protein SufB
CIHINEOD_01506 0.0 S L,D-transpeptidase catalytic domain
CIHINEOD_01507 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
CIHINEOD_01508 1.7e-48 M Aamy_C
CIHINEOD_01509 1e-184 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
CIHINEOD_01510 2.8e-84 dexB 2.4.1.7, 3.2.1.20, 3.2.1.51, 3.2.1.70, 3.2.1.93, 3.2.1.97 GH101,GH13,GH29,GH31 M Aamy_C
CIHINEOD_01511 7e-95 amy 3.2.1.1, 3.2.1.41 CBM48,GH13 G Alpha amylase, catalytic domain
CIHINEOD_01514 2e-222
CIHINEOD_01515 8.7e-215
CIHINEOD_01516 1.3e-80
CIHINEOD_01517 9.9e-82
CIHINEOD_01518 7.3e-191
CIHINEOD_01519 4e-41 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
CIHINEOD_01520 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CIHINEOD_01521 5.4e-220 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CIHINEOD_01522 1.3e-37 3.4.23.43 S Type IV leader peptidase family
CIHINEOD_01523 1.8e-199 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CIHINEOD_01524 1.2e-85 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CIHINEOD_01525 1.3e-172 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CIHINEOD_01526 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CIHINEOD_01527 1.4e-34
CIHINEOD_01528 2.4e-63 WQ51_05790 S Bacterial protein of unknown function (DUF948)
CIHINEOD_01529 1.6e-128 pgm3 3.1.3.85 G Phosphoglycerate mutase family
CIHINEOD_01530 8.9e-63 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
CIHINEOD_01531 5.8e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CIHINEOD_01532 0.0 pcrA 3.6.4.12 L DNA helicase
CIHINEOD_01533 3e-91 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
CIHINEOD_01534 4e-265 pbuX F Permease family
CIHINEOD_01535 1.5e-112 M Protein of unknown function (DUF3737)
CIHINEOD_01536 1.8e-27 patB 4.4.1.8 E Aminotransferase, class I II
CIHINEOD_01537 4.7e-179 patB 4.4.1.8 E Aminotransferase, class I II
CIHINEOD_01538 4.2e-186 K TRANSCRIPTIONal
CIHINEOD_01539 0.0 amyA 3.2.1.1 GH13 G Glycosyl hydrolase family 70
CIHINEOD_01540 1e-141 S Peptidase C26
CIHINEOD_01541 2.3e-84 proX S Aminoacyl-tRNA editing domain
CIHINEOD_01542 3.9e-97 S ABC-2 family transporter protein
CIHINEOD_01543 8.7e-167 V ATPases associated with a variety of cellular activities
CIHINEOD_01544 2.4e-66 K helix_turn_helix gluconate operon transcriptional repressor
CIHINEOD_01545 2.2e-190 K Helix-turn-helix XRE-family like proteins
CIHINEOD_01546 7.7e-183
CIHINEOD_01547 2.3e-141
CIHINEOD_01548 1.4e-50 4.2.99.21 E Chorismate mutase type II
CIHINEOD_01549 3.4e-160 E -acetyltransferase
CIHINEOD_01550 3.9e-71 K Acetyltransferase (GNAT) family
CIHINEOD_01551 1e-107 adk 2.7.4.3 F adenylate kinase activity
CIHINEOD_01552 2e-64 S AAA domain
CIHINEOD_01553 2.1e-125 tetP J elongation factor G
CIHINEOD_01554 3.4e-225 tetP J elongation factor G
CIHINEOD_01555 4.6e-177 insH6 L Transposase domain (DUF772)
CIHINEOD_01556 1.3e-69 K sequence-specific DNA binding
CIHINEOD_01557 3.3e-302 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
CIHINEOD_01558 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
CIHINEOD_01559 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
CIHINEOD_01560 5.7e-233 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CIHINEOD_01561 4e-267 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
CIHINEOD_01563 2.4e-231 ykiI
CIHINEOD_01564 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
CIHINEOD_01565 5.7e-123 3.6.1.13 L NUDIX domain
CIHINEOD_01566 8.3e-184 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
CIHINEOD_01567 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CIHINEOD_01569 7.1e-117 pdtaR T Response regulator receiver domain protein
CIHINEOD_01570 2.6e-120 aspA 3.6.1.13 L NUDIX domain
CIHINEOD_01572 2.3e-223 pyk 2.7.1.40 G Pyruvate kinase
CIHINEOD_01573 2.5e-178 terC P Integral membrane protein, TerC family
CIHINEOD_01574 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
CIHINEOD_01575 3.8e-119 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CIHINEOD_01576 1.1e-267
CIHINEOD_01577 3.1e-164 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CIHINEOD_01578 7.3e-186 P Zinc-uptake complex component A periplasmic
CIHINEOD_01579 5.1e-170 znuC P ATPases associated with a variety of cellular activities
CIHINEOD_01580 1.7e-143 znuB U ABC 3 transport family
CIHINEOD_01581 1.9e-89 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
CIHINEOD_01582 6.6e-102 carD K CarD-like/TRCF domain
CIHINEOD_01583 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CIHINEOD_01584 5.3e-130 T Response regulator receiver domain protein
CIHINEOD_01585 1.2e-202 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
CIHINEOD_01586 1.3e-145 ctsW S Phosphoribosyl transferase domain
CIHINEOD_01587 7.9e-154 cof 5.2.1.8 T Eukaryotic phosphomannomutase
CIHINEOD_01588 5.6e-55 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
CIHINEOD_01589 3.1e-276
CIHINEOD_01590 1.7e-53 S Glycosyl transferase, family 2
CIHINEOD_01591 1.4e-270 G Psort location CytoplasmicMembrane, score 10.00
CIHINEOD_01592 0.0 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
CIHINEOD_01593 9.9e-202 K Periplasmic binding protein domain
CIHINEOD_01594 1.2e-145 cobB2 K Sir2 family
CIHINEOD_01595 2.8e-224 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
CIHINEOD_01596 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
CIHINEOD_01598 9.1e-186 K Psort location Cytoplasmic, score
CIHINEOD_01599 0.0 rafA 3.2.1.22 G Raffinose synthase or seed imbibition protein Sip1
CIHINEOD_01600 1.5e-161 G Binding-protein-dependent transport system inner membrane component
CIHINEOD_01601 6.8e-184 G Binding-protein-dependent transport system inner membrane component
CIHINEOD_01602 9e-237 msmE7 G Bacterial extracellular solute-binding protein
CIHINEOD_01603 3.6e-232 nagC GK ROK family
CIHINEOD_01604 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
CIHINEOD_01605 5.7e-85 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
CIHINEOD_01606 0.0 yjcE P Sodium/hydrogen exchanger family
CIHINEOD_01607 3.6e-171 ypfH S Phospholipase/Carboxylesterase
CIHINEOD_01608 7.9e-163 D nuclear chromosome segregation
CIHINEOD_01609 6.9e-112 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
CIHINEOD_01610 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
CIHINEOD_01611 2.6e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CIHINEOD_01612 3.6e-279 KLT Domain of unknown function (DUF4032)
CIHINEOD_01613 1.5e-211 ugpC E Belongs to the ABC transporter superfamily
CIHINEOD_01614 5.5e-189 U Ion channel
CIHINEOD_01615 0.0 KLT Protein tyrosine kinase
CIHINEOD_01616 5.8e-85 O Thioredoxin
CIHINEOD_01618 1.2e-219 S G5
CIHINEOD_01619 7e-164 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
CIHINEOD_01620 4.1e-178 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CIHINEOD_01621 1.5e-112 S LytR cell envelope-related transcriptional attenuator
CIHINEOD_01622 1.4e-308 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
CIHINEOD_01623 3.5e-172 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
CIHINEOD_01624 0.0
CIHINEOD_01625 0.0 murJ KLT MviN-like protein
CIHINEOD_01626 1.4e-178 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
CIHINEOD_01627 1.9e-232 parB K Belongs to the ParB family
CIHINEOD_01628 8.7e-176 parA D CobQ CobB MinD ParA nucleotide binding domain protein
CIHINEOD_01629 8.8e-136 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
CIHINEOD_01630 3.2e-95 jag S Putative single-stranded nucleic acids-binding domain
CIHINEOD_01631 5.6e-178 yidC U Membrane protein insertase, YidC Oxa1 family
CIHINEOD_01632 5.9e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)