ORF_ID e_value Gene_name EC_number CAZy COGs Description
PAKCCMHM_00003 7.7e-20 L Replication initiation factor
PAKCCMHM_00004 5.2e-42 M Plasmid recombination enzyme
PAKCCMHM_00021 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PAKCCMHM_00022 2.2e-182 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PAKCCMHM_00023 1.2e-194 cpoA GT4 M Glycosyltransferase, group 1 family protein
PAKCCMHM_00024 5.5e-217 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
PAKCCMHM_00036 1.9e-59
PAKCCMHM_00037 7.4e-81 atl 3.2.1.96, 3.5.1.28 GH73 UW LPXTG-motif cell wall anchor domain protein
PAKCCMHM_00038 2.2e-22 M domain protein
PAKCCMHM_00039 6.3e-59 L Transposase
PAKCCMHM_00040 2.5e-15 S the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts
PAKCCMHM_00041 3.4e-183 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PAKCCMHM_00042 3.7e-124 manY G PTS system
PAKCCMHM_00043 1.5e-169 manN G system, mannose fructose sorbose family IID component
PAKCCMHM_00044 1.7e-63 manO S Domain of unknown function (DUF956)
PAKCCMHM_00045 7.4e-253 yifK E Amino acid permease
PAKCCMHM_00046 3.5e-231 yifK E Amino acid permease
PAKCCMHM_00047 2.5e-135 puuD S peptidase C26
PAKCCMHM_00048 6.5e-233 steT_1 E amino acid
PAKCCMHM_00049 1.9e-189 asnA 6.3.1.1 F aspartate--ammonia ligase
PAKCCMHM_00050 2.8e-160 EG EamA-like transporter family
PAKCCMHM_00051 7.1e-256 yfnA E Amino Acid
PAKCCMHM_00052 2.3e-130 cobQ S glutamine amidotransferase
PAKCCMHM_00053 2.1e-146 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PAKCCMHM_00054 1.5e-141 ptp2 3.1.3.48 T Tyrosine phosphatase family
PAKCCMHM_00055 1.4e-184 scrR K Transcriptional regulator, LacI family
PAKCCMHM_00056 1.1e-296 scrB 3.2.1.26 GH32 G invertase
PAKCCMHM_00057 0.0 scrA 2.7.1.199, 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
PAKCCMHM_00058 7.2e-89 ymdB S Macro domain protein
PAKCCMHM_00059 1.4e-292 V ABC transporter transmembrane region
PAKCCMHM_00060 2.4e-124 puuD S peptidase C26
PAKCCMHM_00061 9.7e-217 mdtG EGP Major facilitator Superfamily
PAKCCMHM_00062 8.3e-154
PAKCCMHM_00063 4.8e-70 aroD 1.1.1.25, 4.2.1.10 E 3-dehydroquinate dehydratase activity
PAKCCMHM_00064 1.8e-152 2.7.7.12 C Domain of unknown function (DUF4931)
PAKCCMHM_00065 6.9e-153 ybbH_2 K Helix-turn-helix domain, rpiR family
PAKCCMHM_00066 7.9e-13 3.4.16.4, 3.5.2.6 V Beta-lactamase enzyme family
PAKCCMHM_00067 3.8e-109 3.4.16.4, 3.5.2.6 V Beta-lactamase enzyme family
PAKCCMHM_00068 0.0 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
PAKCCMHM_00069 1.7e-157 O protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
PAKCCMHM_00070 1.9e-124
PAKCCMHM_00071 4.2e-51
PAKCCMHM_00072 4.7e-137 S Belongs to the UPF0246 family
PAKCCMHM_00073 6.5e-139 aroD S Alpha/beta hydrolase family
PAKCCMHM_00074 2.3e-113 G Phosphoglycerate mutase family
PAKCCMHM_00075 2.1e-108 G phosphoglycerate mutase
PAKCCMHM_00076 6.9e-87 ygfC K Bacterial regulatory proteins, tetR family
PAKCCMHM_00077 3.7e-180 hrtB V ABC transporter permease
PAKCCMHM_00078 4.4e-118 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PAKCCMHM_00079 9.2e-130 K CAT RNA binding domain
PAKCCMHM_00080 2.4e-241 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PAKCCMHM_00081 2.6e-266 pipD E Dipeptidase
PAKCCMHM_00082 3e-37
PAKCCMHM_00083 2.1e-106 K WHG domain
PAKCCMHM_00084 6e-94 nqr 1.5.1.36 S reductase
PAKCCMHM_00085 8.3e-99 azr 1.5.1.36 S NADPH-dependent FMN reductase
PAKCCMHM_00086 1.9e-200 4.2.1.126 S Bacterial protein of unknown function (DUF871)
PAKCCMHM_00087 9.1e-147 3.1.3.48 T Tyrosine phosphatase family
PAKCCMHM_00088 2.3e-178 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PAKCCMHM_00089 6.4e-96 cvpA S Colicin V production protein
PAKCCMHM_00090 1.5e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PAKCCMHM_00091 1.5e-142 noc K Belongs to the ParB family
PAKCCMHM_00092 9.7e-138 soj D Sporulation initiation inhibitor
PAKCCMHM_00093 2.2e-154 spo0J K Belongs to the ParB family
PAKCCMHM_00094 2.9e-43 yyzM S Bacterial protein of unknown function (DUF951)
PAKCCMHM_00095 4.4e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PAKCCMHM_00096 4.3e-147 XK27_01040 S Protein of unknown function (DUF1129)
PAKCCMHM_00097 1.3e-296 V ABC transporter, ATP-binding protein
PAKCCMHM_00098 0.0 V ABC transporter
PAKCCMHM_00099 7.4e-121 K response regulator
PAKCCMHM_00100 7.9e-200 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
PAKCCMHM_00101 8.5e-306 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PAKCCMHM_00102 5.7e-143 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PAKCCMHM_00103 9.8e-55 natA S ABC transporter, ATP-binding protein
PAKCCMHM_00104 1e-50 natA S ABC transporter, ATP-binding protein
PAKCCMHM_00105 1.4e-77 natB CP ABC-2 family transporter protein
PAKCCMHM_00106 1e-111 natB CP ABC-2 family transporter protein
PAKCCMHM_00107 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PAKCCMHM_00108 1.2e-135 fruR K DeoR C terminal sensor domain
PAKCCMHM_00109 2e-166 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PAKCCMHM_00110 0.0 fruA 2.7.1.200, 2.7.1.202 GT Phosphotransferase System
PAKCCMHM_00111 1.4e-225 sdrF M domain protein
PAKCCMHM_00112 1.3e-137 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
PAKCCMHM_00113 2.1e-42 K helix_turn_helix, Arsenical Resistance Operon Repressor
PAKCCMHM_00114 2.7e-155 psaA P Belongs to the bacterial solute-binding protein 9 family
PAKCCMHM_00115 9.6e-118 fhuC P ABC transporter
PAKCCMHM_00116 3.7e-132 znuB U ABC 3 transport family
PAKCCMHM_00117 1.8e-257 lctP C L-lactate permease
PAKCCMHM_00118 0.0 pepF E oligoendopeptidase F
PAKCCMHM_00119 9.3e-206 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PAKCCMHM_00120 5.3e-38
PAKCCMHM_00121 2.4e-60
PAKCCMHM_00122 1.9e-281 S ABC transporter
PAKCCMHM_00123 9.2e-136 thrE S Putative threonine/serine exporter
PAKCCMHM_00124 6.9e-78 S Threonine/Serine exporter, ThrE
PAKCCMHM_00125 1.2e-39
PAKCCMHM_00126 2.3e-59 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PAKCCMHM_00127 2.6e-80
PAKCCMHM_00128 3.9e-173 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAKCCMHM_00129 2e-29 nrdI F Belongs to the NrdI family
PAKCCMHM_00130 1.2e-109
PAKCCMHM_00131 2e-267 S O-antigen ligase like membrane protein
PAKCCMHM_00132 5.3e-44
PAKCCMHM_00133 1.4e-98 gmk2 2.7.4.8 F Guanylate kinase
PAKCCMHM_00134 4.3e-115 M NlpC P60 family protein
PAKCCMHM_00135 4.9e-229 S Putative peptidoglycan binding domain
PAKCCMHM_00136 2.1e-230 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PAKCCMHM_00137 4.9e-276 E amino acid
PAKCCMHM_00138 6.5e-131 cysA V ABC transporter, ATP-binding protein
PAKCCMHM_00139 0.0 V FtsX-like permease family
PAKCCMHM_00140 3.3e-16 K transcriptional regulator
PAKCCMHM_00141 4.7e-83 gcd E Alcohol dehydrogenase GroES-like domain
PAKCCMHM_00142 1.4e-124 pgm3 G Phosphoglycerate mutase family
PAKCCMHM_00143 8.2e-26
PAKCCMHM_00144 1.4e-51
PAKCCMHM_00145 9.8e-24 xth 3.1.11.2 L exodeoxyribonuclease III
PAKCCMHM_00146 3.6e-99 xth 3.1.11.2 L exodeoxyribonuclease III
PAKCCMHM_00147 0.0 ptsG 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
PAKCCMHM_00148 3.1e-127 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PAKCCMHM_00149 9e-142 rpiR1 K Helix-turn-helix domain, rpiR family
PAKCCMHM_00150 0.0 3.6.3.8 P ATPase, P-type (transporting), HAD superfamily, subfamily IC
PAKCCMHM_00152 1.1e-113 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
PAKCCMHM_00153 0.0 helD 3.6.4.12 L DNA helicase
PAKCCMHM_00154 5.4e-122 yvpB S Peptidase_C39 like family
PAKCCMHM_00155 4e-119 K Helix-turn-helix domain, rpiR family
PAKCCMHM_00156 4.5e-83 rarA L MgsA AAA+ ATPase C terminal
PAKCCMHM_00157 1.9e-237 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKCCMHM_00158 8e-105 E GDSL-like Lipase/Acylhydrolase
PAKCCMHM_00159 1.9e-163 coaA 2.7.1.33 F Pantothenic acid kinase
PAKCCMHM_00160 8.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PAKCCMHM_00161 1e-154 EG EamA-like transporter family
PAKCCMHM_00162 4.5e-238 oppA E ABC transporter substrate-binding protein
PAKCCMHM_00163 5.2e-162 2.7.1.191 G PTS system sorbose subfamily IIB component
PAKCCMHM_00164 1.2e-138 G PTS system sorbose-specific iic component
PAKCCMHM_00165 2.5e-144 G PTS system mannose/fructose/sorbose family IID component
PAKCCMHM_00166 3.2e-60
PAKCCMHM_00167 2.2e-87 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PAKCCMHM_00168 4.4e-200 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
PAKCCMHM_00169 1.4e-235 ydjN U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PAKCCMHM_00170 1.8e-133 S PAS domain
PAKCCMHM_00171 1.4e-41 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PAKCCMHM_00172 2.8e-18 GM domain, Protein
PAKCCMHM_00173 1.2e-143 pnuC H nicotinamide mononucleotide transporter
PAKCCMHM_00174 1.2e-94 S PAS domain
PAKCCMHM_00175 1.2e-238 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PAKCCMHM_00176 2.9e-73 S Protein of unknown function (DUF3290)
PAKCCMHM_00177 1.1e-110 yviA S Protein of unknown function (DUF421)
PAKCCMHM_00178 8.8e-150 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PAKCCMHM_00179 4.7e-182 dnaQ 2.7.7.7 L EXOIII
PAKCCMHM_00180 8.9e-79 ltrA S Bacterial low temperature requirement A protein (LtrA)
PAKCCMHM_00181 1e-156 dkg S reductase
PAKCCMHM_00182 3.9e-156 endA F DNA RNA non-specific endonuclease
PAKCCMHM_00183 1.1e-280 pipD E Dipeptidase
PAKCCMHM_00184 4e-76 malK P ATPases associated with a variety of cellular activities
PAKCCMHM_00185 1.4e-110 malK P ATPases associated with a variety of cellular activities
PAKCCMHM_00186 1e-156 gtsB P ABC-type sugar transport systems, permease components
PAKCCMHM_00187 5e-148 gtsC P Binding-protein-dependent transport system inner membrane component
PAKCCMHM_00188 3.9e-248 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
PAKCCMHM_00189 8.2e-238 G Bacterial extracellular solute-binding protein
PAKCCMHM_00190 3.4e-48 ypaA S Protein of unknown function (DUF1304)
PAKCCMHM_00191 7e-75 yybA 2.3.1.57 K Transcriptional regulator
PAKCCMHM_00192 2.6e-86 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
PAKCCMHM_00193 6.5e-78 yjcF S Acetyltransferase (GNAT) domain
PAKCCMHM_00194 2e-166 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
PAKCCMHM_00195 3.2e-159 3.5.2.6 V Beta-lactamase enzyme family
PAKCCMHM_00196 2.3e-96 yobS K Bacterial regulatory proteins, tetR family
PAKCCMHM_00197 6.8e-131 ydgH S MMPL family
PAKCCMHM_00198 5.7e-141 cof S haloacid dehalogenase-like hydrolase
PAKCCMHM_00199 2.2e-125 S SNARE associated Golgi protein
PAKCCMHM_00200 2.8e-177
PAKCCMHM_00201 1.2e-258 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
PAKCCMHM_00202 4e-153 hipB K Helix-turn-helix
PAKCCMHM_00203 1.7e-153 I alpha/beta hydrolase fold
PAKCCMHM_00204 5.3e-107 yjbF S SNARE associated Golgi protein
PAKCCMHM_00205 1.5e-100 J Acetyltransferase (GNAT) domain
PAKCCMHM_00206 2.5e-218 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PAKCCMHM_00207 3.2e-62 yugI 5.3.1.9 J general stress protein
PAKCCMHM_00208 5.9e-177 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
PAKCCMHM_00209 2.7e-117 dedA S SNARE-like domain protein
PAKCCMHM_00210 7.3e-104 S Protein of unknown function (DUF1461)
PAKCCMHM_00211 2.6e-146 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PAKCCMHM_00212 9.3e-95 yutD S Protein of unknown function (DUF1027)
PAKCCMHM_00213 9.5e-269 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PAKCCMHM_00214 1.3e-54
PAKCCMHM_00215 6.4e-265 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PAKCCMHM_00216 2.2e-273 pepV 3.5.1.18 E dipeptidase PepV
PAKCCMHM_00217 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M Penicillin binding protein transpeptidase domain
PAKCCMHM_00218 4.1e-173 ccpA K catabolite control protein A
PAKCCMHM_00219 3.6e-210 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PAKCCMHM_00220 9.6e-50
PAKCCMHM_00221 1.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PAKCCMHM_00222 6.6e-138 ykuT M mechanosensitive ion channel
PAKCCMHM_00223 1e-215 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAKCCMHM_00224 1.3e-116 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PAKCCMHM_00225 1.6e-143 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PAKCCMHM_00226 9.3e-68 yslB S Protein of unknown function (DUF2507)
PAKCCMHM_00227 1.1e-52 trxA O Belongs to the thioredoxin family
PAKCCMHM_00228 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PAKCCMHM_00229 8.2e-91 cvpA S Colicin V production protein
PAKCCMHM_00230 4.2e-39 yrzB S Belongs to the UPF0473 family
PAKCCMHM_00231 1.5e-71 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PAKCCMHM_00232 2.6e-42 yrzL S Belongs to the UPF0297 family
PAKCCMHM_00233 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PAKCCMHM_00234 2.9e-225 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PAKCCMHM_00235 4.3e-183 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PAKCCMHM_00236 1.4e-206 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PAKCCMHM_00237 1.7e-281 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PAKCCMHM_00238 2.5e-37 yajC U Preprotein translocase
PAKCCMHM_00239 4.3e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PAKCCMHM_00240 8.7e-99 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PAKCCMHM_00241 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PAKCCMHM_00242 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PAKCCMHM_00243 0.0 nisT V ABC transporter
PAKCCMHM_00244 6.9e-31
PAKCCMHM_00245 3.1e-57
PAKCCMHM_00246 3.5e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PAKCCMHM_00247 8.8e-44 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PAKCCMHM_00248 7.3e-113 sip L Belongs to the 'phage' integrase family
PAKCCMHM_00249 2.1e-13 K Transcriptional
PAKCCMHM_00250 2.5e-10 S Helix-turn-helix domain
PAKCCMHM_00253 3e-08
PAKCCMHM_00254 2.5e-25
PAKCCMHM_00260 5.3e-120 liaI S membrane
PAKCCMHM_00261 2.7e-79 XK27_02470 K LytTr DNA-binding domain
PAKCCMHM_00262 3.7e-102 yvdD 3.2.2.10 S Belongs to the LOG family
PAKCCMHM_00263 3.4e-115 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PAKCCMHM_00264 0.0 uup S ABC transporter, ATP-binding protein
PAKCCMHM_00265 4.9e-243 G Bacterial extracellular solute-binding protein
PAKCCMHM_00266 7.2e-14
PAKCCMHM_00267 4.6e-22
PAKCCMHM_00268 2.5e-153 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PAKCCMHM_00269 1.9e-138 K LytTr DNA-binding domain
PAKCCMHM_00270 1.9e-71 2.7.13.3 T GHKL domain
PAKCCMHM_00271 5.5e-96 2.7.13.3 T GHKL domain
PAKCCMHM_00272 2.3e-45
PAKCCMHM_00273 2.1e-42 apfA 2.7.7.72, 3.6.1.61 F NUDIX domain
PAKCCMHM_00274 5.4e-242 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PAKCCMHM_00275 1.6e-249 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PAKCCMHM_00276 3.1e-189 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PAKCCMHM_00277 3.4e-247 clcA P chloride
PAKCCMHM_00278 7.2e-115
PAKCCMHM_00279 2.5e-153
PAKCCMHM_00280 4.8e-30 D nuclear chromosome segregation
PAKCCMHM_00281 1.3e-148 D nuclear chromosome segregation
PAKCCMHM_00282 9e-195 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PAKCCMHM_00283 6.4e-96 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PAKCCMHM_00284 6.3e-131 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PAKCCMHM_00285 6.2e-80 folT S ECF transporter, substrate-specific component
PAKCCMHM_00286 7.8e-137 fat 3.1.2.21 I Acyl-ACP thioesterase
PAKCCMHM_00287 1.3e-154 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PAKCCMHM_00288 4.4e-58 yabA L Involved in initiation control of chromosome replication
PAKCCMHM_00289 6.5e-151 holB 2.7.7.7 L DNA polymerase III
PAKCCMHM_00290 5e-51 yaaQ S Cyclic-di-AMP receptor
PAKCCMHM_00291 3.1e-113 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PAKCCMHM_00292 4.5e-25 S Protein of unknown function (DUF2508)
PAKCCMHM_00293 6.9e-107 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PAKCCMHM_00294 1e-51 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PAKCCMHM_00295 8.5e-294 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAKCCMHM_00296 2.3e-84 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PAKCCMHM_00297 2.4e-37 S Protein conserved in bacteria
PAKCCMHM_00298 2.4e-145
PAKCCMHM_00299 3.6e-22
PAKCCMHM_00300 2.5e-112 rsmC 2.1.1.172 J Methyltransferase
PAKCCMHM_00301 2.7e-32
PAKCCMHM_00302 5.2e-127 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
PAKCCMHM_00303 9.4e-51 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PAKCCMHM_00304 5.8e-95 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PAKCCMHM_00305 1.6e-143 aatB ET ABC transporter substrate-binding protein
PAKCCMHM_00306 3.9e-116 glnQ 3.6.3.21 E ABC transporter
PAKCCMHM_00307 4.6e-109 glnP P ABC transporter permease
PAKCCMHM_00308 3.6e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PAKCCMHM_00309 5.3e-69 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PAKCCMHM_00310 1.5e-100 nusG K Participates in transcription elongation, termination and antitermination
PAKCCMHM_00311 3.4e-11 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PAKCCMHM_00312 1.8e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PAKCCMHM_00313 8.7e-190 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PAKCCMHM_00314 4.8e-227 G Major Facilitator Superfamily
PAKCCMHM_00315 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PAKCCMHM_00316 1.3e-279 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
PAKCCMHM_00317 6.3e-34
PAKCCMHM_00318 1.5e-87 yvrI K sigma factor activity
PAKCCMHM_00319 2e-140 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PAKCCMHM_00320 1.3e-78 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PAKCCMHM_00321 1.8e-270 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PAKCCMHM_00322 1.5e-288 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PAKCCMHM_00323 3.5e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PAKCCMHM_00324 3.3e-103 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
PAKCCMHM_00325 1.3e-33 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PAKCCMHM_00326 1.1e-15 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PAKCCMHM_00327 3.7e-120 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PAKCCMHM_00328 2e-263 pepC 3.4.22.40 E Peptidase C1-like family
PAKCCMHM_00329 1.1e-29 ltrA S Bacterial low temperature requirement A protein (LtrA)
PAKCCMHM_00330 1.2e-61 gadC E Contains amino acid permease domain
PAKCCMHM_00331 1.5e-111 L COG2963 Transposase and inactivated derivatives
PAKCCMHM_00332 8.9e-36 L transposase activity
PAKCCMHM_00333 4.3e-26 L Transposase
PAKCCMHM_00334 1e-72 L Transposase
PAKCCMHM_00335 8.5e-52 L Transposase
PAKCCMHM_00336 1.1e-183 S AAA domain
PAKCCMHM_00337 9.2e-124 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PAKCCMHM_00338 9.9e-12
PAKCCMHM_00339 5.2e-35
PAKCCMHM_00340 8.5e-154 czcD P cation diffusion facilitator family transporter
PAKCCMHM_00341 3.5e-52 K Transcriptional regulator, ArsR family
PAKCCMHM_00342 1.5e-129 pgm3 G Belongs to the phosphoglycerate mutase family
PAKCCMHM_00343 9.4e-109 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
PAKCCMHM_00344 1.8e-148 1.6.5.2 GM NmrA-like family
PAKCCMHM_00345 1.5e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
PAKCCMHM_00346 5e-78 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PAKCCMHM_00347 9.6e-149 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PAKCCMHM_00348 1.8e-139 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAKCCMHM_00349 1.1e-206 L Putative transposase DNA-binding domain
PAKCCMHM_00350 5.5e-158 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAKCCMHM_00351 1e-151 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAKCCMHM_00352 7.4e-62 rplQ J Ribosomal protein L17
PAKCCMHM_00353 9.6e-172 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAKCCMHM_00354 2.6e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PAKCCMHM_00355 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PAKCCMHM_00356 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PAKCCMHM_00357 1.4e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PAKCCMHM_00358 4.5e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PAKCCMHM_00359 4.5e-236 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PAKCCMHM_00360 1.3e-70 rplO J Binds to the 23S rRNA
PAKCCMHM_00361 1.4e-23 rpmD J Ribosomal protein L30
PAKCCMHM_00362 1.9e-76 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PAKCCMHM_00363 1.5e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PAKCCMHM_00364 8.6e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PAKCCMHM_00365 2.1e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PAKCCMHM_00366 2.3e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PAKCCMHM_00367 7.2e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PAKCCMHM_00368 1.1e-34 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PAKCCMHM_00369 5.6e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PAKCCMHM_00370 7.7e-42 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PAKCCMHM_00371 2.2e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
PAKCCMHM_00372 6.6e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PAKCCMHM_00373 1e-119 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PAKCCMHM_00374 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PAKCCMHM_00375 5e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PAKCCMHM_00376 1.6e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PAKCCMHM_00377 1.7e-45 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PAKCCMHM_00378 1e-105 rplD J Forms part of the polypeptide exit tunnel
PAKCCMHM_00379 2.8e-111 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PAKCCMHM_00380 2.2e-48 rpsJ J Involved in the binding of tRNA to the ribosomes
PAKCCMHM_00381 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PAKCCMHM_00382 1e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PAKCCMHM_00383 3.5e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PAKCCMHM_00384 6.1e-96 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
PAKCCMHM_00385 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAKCCMHM_00386 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAKCCMHM_00387 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PAKCCMHM_00389 1.6e-08
PAKCCMHM_00390 6.8e-300 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PAKCCMHM_00391 3.8e-190 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PAKCCMHM_00392 5.4e-161 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PAKCCMHM_00393 0.0 S membrane
PAKCCMHM_00394 0.0 S membrane
PAKCCMHM_00395 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PAKCCMHM_00396 2.8e-157 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PAKCCMHM_00397 9.3e-59 yabR J S1 RNA binding domain
PAKCCMHM_00398 4e-60 divIC D Septum formation initiator
PAKCCMHM_00399 2e-33 yabO J S4 domain protein
PAKCCMHM_00400 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PAKCCMHM_00401 2.5e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PAKCCMHM_00402 4.7e-182 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PAKCCMHM_00403 3.5e-123 S (CBS) domain
PAKCCMHM_00404 1.3e-212 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PAKCCMHM_00405 2.1e-58 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PAKCCMHM_00406 6.5e-268 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PAKCCMHM_00407 2.1e-260 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PAKCCMHM_00408 2.8e-72 L COG3547 Transposase and inactivated derivatives
PAKCCMHM_00409 1.4e-40 rpmE2 J Ribosomal protein L31
PAKCCMHM_00410 3.5e-299 ybeC E amino acid
PAKCCMHM_00411 2.9e-134 XK27_08845 S ABC transporter, ATP-binding protein
PAKCCMHM_00412 1.2e-139 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PAKCCMHM_00413 3.4e-175 ABC-SBP S ABC transporter
PAKCCMHM_00414 3.6e-227 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PAKCCMHM_00415 2.4e-278 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
PAKCCMHM_00416 0.0 rafA 3.2.1.22 G alpha-galactosidase
PAKCCMHM_00417 0.0 gph G Transporter
PAKCCMHM_00418 6.1e-154 msmR K AraC-like ligand binding domain
PAKCCMHM_00419 4.2e-280 pipD E Dipeptidase
PAKCCMHM_00420 1.6e-140 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PAKCCMHM_00421 3.8e-81 XK27_02070 S Nitroreductase family
PAKCCMHM_00422 8.7e-32 hxlR K Transcriptional regulator, HxlR family
PAKCCMHM_00423 4.1e-34
PAKCCMHM_00424 8.9e-23
PAKCCMHM_00425 3.6e-62 S Putative adhesin
PAKCCMHM_00426 1.6e-34
PAKCCMHM_00427 5.4e-188 yfdV S Membrane transport protein
PAKCCMHM_00428 0.0 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
PAKCCMHM_00429 4.5e-263 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PAKCCMHM_00430 4e-95
PAKCCMHM_00431 3.5e-67 adk 2.7.4.3 F adenylate kinase activity
PAKCCMHM_00432 1.5e-72 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PAKCCMHM_00433 3.1e-107 lmrB P Belongs to the major facilitator superfamily
PAKCCMHM_00434 3.8e-104 S B3 4 domain
PAKCCMHM_00435 1.2e-83 XK27_09675 K Acetyltransferase (GNAT) domain
PAKCCMHM_00436 1.9e-121 ywhK S Membrane
PAKCCMHM_00437 5.7e-94 yxkA S Phosphatidylethanolamine-binding protein
PAKCCMHM_00438 8.3e-103 K transcriptional regulator
PAKCCMHM_00439 1.4e-12
PAKCCMHM_00440 3.9e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PAKCCMHM_00441 1e-53 K Psort location CytoplasmicMembrane, score
PAKCCMHM_00442 9.9e-103 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PAKCCMHM_00443 1.7e-235 pbuX F xanthine permease
PAKCCMHM_00444 9.4e-239 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PAKCCMHM_00445 5.8e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PAKCCMHM_00446 5.5e-63 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PAKCCMHM_00447 6.2e-73 S Domain of unknown function (DUF1934)
PAKCCMHM_00448 8.8e-267 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
PAKCCMHM_00449 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
PAKCCMHM_00450 4.1e-153 malG P ABC transporter permease
PAKCCMHM_00451 2.5e-253 malF P Binding-protein-dependent transport system inner membrane component
PAKCCMHM_00452 1.8e-215 malE G Bacterial extracellular solute-binding protein
PAKCCMHM_00453 8e-210 msmX P Belongs to the ABC transporter superfamily
PAKCCMHM_00454 2.9e-114 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PAKCCMHM_00455 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PAKCCMHM_00456 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PAKCCMHM_00457 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
PAKCCMHM_00458 5.7e-172 yvdE K helix_turn _helix lactose operon repressor
PAKCCMHM_00459 7.6e-172 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PAKCCMHM_00460 8.5e-217 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PAKCCMHM_00461 1.3e-151 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
PAKCCMHM_00462 2.2e-35 veg S Biofilm formation stimulator VEG
PAKCCMHM_00463 7.4e-158 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PAKCCMHM_00464 1.4e-96 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PAKCCMHM_00465 6.3e-145 tatD L hydrolase, TatD family
PAKCCMHM_00466 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PAKCCMHM_00467 2.6e-178 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PAKCCMHM_00468 3.4e-98 S TPM domain
PAKCCMHM_00469 5.6e-91 comEB 3.5.4.12 F MafB19-like deaminase
PAKCCMHM_00470 1.2e-194 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PAKCCMHM_00471 3.5e-114 E Belongs to the SOS response-associated peptidase family
PAKCCMHM_00473 5.8e-115
PAKCCMHM_00474 1.5e-155 ypbG 2.7.1.2 GK ROK family
PAKCCMHM_00475 5.7e-274 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PAKCCMHM_00476 5e-54 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKCCMHM_00477 4.9e-28 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKCCMHM_00478 1.3e-24 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKCCMHM_00479 1.1e-76 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKCCMHM_00480 5.8e-52 ptcB 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PAKCCMHM_00481 9e-36
PAKCCMHM_00482 8.5e-51 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
PAKCCMHM_00483 4.4e-132 gmuR K UTRA
PAKCCMHM_00484 1.5e-299 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PAKCCMHM_00485 2.7e-32 S Domain of unknown function (DUF3284)
PAKCCMHM_00486 2.4e-127 yydK K UTRA
PAKCCMHM_00487 1.1e-240 celD 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKCCMHM_00488 8.3e-82
PAKCCMHM_00489 2.1e-290 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PAKCCMHM_00490 2.7e-73 hsp O Belongs to the small heat shock protein (HSP20) family
PAKCCMHM_00491 4.1e-75 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PAKCCMHM_00492 5.3e-33
PAKCCMHM_00493 2.4e-253 pepC 3.4.22.40 E aminopeptidase
PAKCCMHM_00494 1.9e-41 ps301 K sequence-specific DNA binding
PAKCCMHM_00495 4.8e-29 S Motility quorum-sensing regulator, toxin of MqsA
PAKCCMHM_00496 3.3e-118 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PAKCCMHM_00497 2e-255 pepC 3.4.22.40 E aminopeptidase
PAKCCMHM_00499 4.2e-239 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PAKCCMHM_00500 0.0 XK27_08315 M Sulfatase
PAKCCMHM_00501 2.5e-112 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PAKCCMHM_00502 5.2e-193 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PAKCCMHM_00503 1.6e-168 yqhA G Aldose 1-epimerase
PAKCCMHM_00504 5.9e-152 glcU U sugar transport
PAKCCMHM_00505 1.1e-116
PAKCCMHM_00506 5.7e-99 lmrB EGP Major facilitator Superfamily
PAKCCMHM_00507 6.3e-10 lmrB EGP Major facilitator Superfamily
PAKCCMHM_00508 2.8e-12 lmrB EGP Major facilitator Superfamily
PAKCCMHM_00509 2.6e-177 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
PAKCCMHM_00510 3.4e-71 2.4.1.83 GT2 S GtrA-like protein
PAKCCMHM_00511 1.7e-41 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PAKCCMHM_00512 1.6e-249 L transposase, IS605 OrfB family
PAKCCMHM_00513 2.9e-84 tlpA2 L Transposase IS200 like
PAKCCMHM_00514 4.6e-11
PAKCCMHM_00515 8.9e-13
PAKCCMHM_00518 5.6e-49 S HicB_like antitoxin of bacterial toxin-antitoxin system
PAKCCMHM_00520 1.1e-132 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PAKCCMHM_00521 6.6e-72 S PAS domain
PAKCCMHM_00522 5.9e-141
PAKCCMHM_00523 2.7e-135
PAKCCMHM_00524 6.2e-174 S Oxidoreductase family, NAD-binding Rossmann fold
PAKCCMHM_00525 0.0 yjbQ P TrkA C-terminal domain protein
PAKCCMHM_00526 4e-142 fruK 2.7.1.11, 2.7.1.56 G pfkB family carbohydrate kinase
PAKCCMHM_00527 2.3e-194 lysA2 M Glycosyl hydrolases family 25
PAKCCMHM_00528 4.7e-213 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PAKCCMHM_00529 4.5e-33 S Protein of unknown function (DUF2922)
PAKCCMHM_00530 3.3e-24
PAKCCMHM_00531 3.4e-109
PAKCCMHM_00532 1.6e-70
PAKCCMHM_00533 0.0 kup P Transport of potassium into the cell
PAKCCMHM_00534 0.0 kup P Transport of potassium into the cell
PAKCCMHM_00535 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
PAKCCMHM_00536 4.4e-308 S Bacterial membrane protein, YfhO
PAKCCMHM_00537 0.0 pepO 3.4.24.71 O Peptidase family M13
PAKCCMHM_00538 0.0 fruA 2.7.1.200, 2.7.1.202 GT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PAKCCMHM_00539 6.6e-165 pfkB 2.7.1.11, 2.7.1.56 H pfkB family carbohydrate kinase
PAKCCMHM_00540 3.8e-134 rpl K Helix-turn-helix domain, rpiR family
PAKCCMHM_00541 9.5e-167 D nuclear chromosome segregation
PAKCCMHM_00542 3e-184 yihT 4.1.2.40, 4.1.2.57 G Belongs to the aldolase LacD family
PAKCCMHM_00543 4.4e-225 yttB EGP Major facilitator Superfamily
PAKCCMHM_00544 3.9e-226 XK27_04775 S PAS domain
PAKCCMHM_00545 2e-103 S Iron-sulfur cluster assembly protein
PAKCCMHM_00546 9e-130 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PAKCCMHM_00547 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PAKCCMHM_00548 2.6e-263 yxbA 6.3.1.12 S ATP-grasp enzyme
PAKCCMHM_00549 0.0 asnB 6.3.5.4 E Asparagine synthase
PAKCCMHM_00550 9.9e-274 S Calcineurin-like phosphoesterase
PAKCCMHM_00551 7.3e-83
PAKCCMHM_00552 9.2e-147 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PAKCCMHM_00553 2.7e-130 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PAKCCMHM_00554 1.8e-139 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PAKCCMHM_00555 1.2e-166 phnD P Phosphonate ABC transporter
PAKCCMHM_00557 1e-87 uspA T universal stress protein
PAKCCMHM_00558 3.4e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
PAKCCMHM_00559 1e-128 XK27_08440 K UTRA domain
PAKCCMHM_00560 1e-99 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PAKCCMHM_00561 4.8e-87 ntd 2.4.2.6 F Nucleoside
PAKCCMHM_00562 7.4e-193 S zinc-ribbon domain
PAKCCMHM_00563 1.9e-65 2.7.1.191 G PTS system fructose IIA component
PAKCCMHM_00564 7.1e-147 manZ_1 G PTS system mannose/fructose/sorbose family IID component
PAKCCMHM_00565 3.4e-129 XK27_08455 G PTS system sorbose-specific iic component
PAKCCMHM_00566 2.5e-83 2.7.1.191 G PTS system sorbose subfamily IIB component
PAKCCMHM_00567 5.8e-227 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PAKCCMHM_00568 1.1e-212 agaS G SIS domain
PAKCCMHM_00569 2e-124 XK27_08435 K UTRA
PAKCCMHM_00570 0.0 G Belongs to the glycosyl hydrolase 31 family
PAKCCMHM_00571 8.7e-153 I alpha/beta hydrolase fold
PAKCCMHM_00572 8.5e-118 yibF S overlaps another CDS with the same product name
PAKCCMHM_00573 8.9e-169 yibE S overlaps another CDS with the same product name
PAKCCMHM_00574 1.6e-264 yjcE P Sodium proton antiporter
PAKCCMHM_00575 5.8e-76
PAKCCMHM_00576 3.1e-206 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PAKCCMHM_00577 5e-263 S Cysteine-rich secretory protein family
PAKCCMHM_00578 4.6e-125
PAKCCMHM_00579 1.2e-89 luxT K Bacterial regulatory proteins, tetR family
PAKCCMHM_00580 2.8e-233 cycA E Amino acid permease
PAKCCMHM_00581 2.7e-180 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PAKCCMHM_00582 7e-62
PAKCCMHM_00583 3.4e-123 S Alpha/beta hydrolase family
PAKCCMHM_00584 1.7e-151 epsV 2.7.8.12 S glycosyl transferase family 2
PAKCCMHM_00585 1.2e-156 ypuA S Protein of unknown function (DUF1002)
PAKCCMHM_00587 9.2e-138 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PAKCCMHM_00588 8.6e-173 S Alpha/beta hydrolase of unknown function (DUF915)
PAKCCMHM_00589 2.4e-122 yugP S Putative neutral zinc metallopeptidase
PAKCCMHM_00590 3.5e-285 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PAKCCMHM_00591 2.6e-80
PAKCCMHM_00592 4.3e-132 cobB K SIR2 family
PAKCCMHM_00593 1.9e-84 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
PAKCCMHM_00594 3.1e-123 terC P Integral membrane protein TerC family
PAKCCMHM_00595 4.5e-61 yeaO S Protein of unknown function, DUF488
PAKCCMHM_00596 4.2e-115 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PAKCCMHM_00597 1.1e-295 glnP P ABC transporter permease
PAKCCMHM_00598 2.1e-137 glnQ E ABC transporter, ATP-binding protein
PAKCCMHM_00599 3e-19
PAKCCMHM_00600 4.1e-161 L HNH nucleases
PAKCCMHM_00601 4.5e-120 yfbR S HD containing hydrolase-like enzyme
PAKCCMHM_00602 6.5e-199 G Glycosyl hydrolases family 8
PAKCCMHM_00603 7.4e-239 ydaM M Glycosyl transferase
PAKCCMHM_00605 8e-101
PAKCCMHM_00606 1.7e-16
PAKCCMHM_00607 1e-64 S Iron-sulphur cluster biosynthesis
PAKCCMHM_00608 1.1e-179 ybiR P Citrate transporter
PAKCCMHM_00609 1.6e-89 lemA S LemA family
PAKCCMHM_00610 3.5e-150 htpX O Belongs to the peptidase M48B family
PAKCCMHM_00611 3e-162 K helix_turn_helix, arabinose operon control protein
PAKCCMHM_00612 5.1e-96 S ABC-type cobalt transport system, permease component
PAKCCMHM_00613 1.8e-243 cbiO1 S ABC transporter, ATP-binding protein
PAKCCMHM_00614 4e-108 P Cobalt transport protein
PAKCCMHM_00615 1.8e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PAKCCMHM_00616 3.5e-174 htrA 3.4.21.107 O serine protease
PAKCCMHM_00617 1.5e-146 vicX 3.1.26.11 S domain protein
PAKCCMHM_00618 2.2e-143 yycI S YycH protein
PAKCCMHM_00619 1.2e-244 yycH S YycH protein
PAKCCMHM_00620 0.0 vicK 2.7.13.3 T Histidine kinase
PAKCCMHM_00621 2.6e-129 K response regulator
PAKCCMHM_00624 3e-147 arbV 2.3.1.51 I Acyl-transferase
PAKCCMHM_00625 1.6e-154 arbx M Glycosyl transferase family 8
PAKCCMHM_00626 3.8e-184 arbY M Glycosyl transferase family 8
PAKCCMHM_00627 1.4e-186 arbY M Glycosyl transferase family 8
PAKCCMHM_00628 1.5e-163 arbZ I Phosphate acyltransferases
PAKCCMHM_00629 9.3e-86 yhjX_2 P Major Facilitator Superfamily
PAKCCMHM_00630 4.2e-44 yhjX_2 P Major Facilitator Superfamily
PAKCCMHM_00631 9.3e-90 yhjX_2 P Major Facilitator Superfamily
PAKCCMHM_00632 8.8e-243 yhjX_2 P Major Facilitator Superfamily
PAKCCMHM_00633 2.7e-182 cbh 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
PAKCCMHM_00634 5.1e-178 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
PAKCCMHM_00635 4.3e-133 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PAKCCMHM_00636 1.7e-238 brnQ U Component of the transport system for branched-chain amino acids
PAKCCMHM_00637 0.0 1.3.5.4 C FAD binding domain
PAKCCMHM_00638 4.4e-169 K LysR substrate binding domain
PAKCCMHM_00639 1.5e-261 E amino acid
PAKCCMHM_00640 0.0 S domain, Protein
PAKCCMHM_00641 1.5e-191 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAKCCMHM_00642 5.1e-99 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
PAKCCMHM_00643 1.6e-208 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PAKCCMHM_00644 1.4e-248 gor 1.8.1.7 C pyridine nucleotide-disulfide oxidoreductase
PAKCCMHM_00645 7.7e-170 K AI-2E family transporter
PAKCCMHM_00646 1.7e-27
PAKCCMHM_00647 1.3e-138 S Alpha beta hydrolase
PAKCCMHM_00648 0.0 L Helicase C-terminal domain protein
PAKCCMHM_00649 3.7e-159 xth 3.1.11.2 L exodeoxyribonuclease III
PAKCCMHM_00650 5.5e-40 S Transglycosylase associated protein
PAKCCMHM_00652 7.3e-207 XK27_02480 EGP Major facilitator Superfamily
PAKCCMHM_00653 2e-139 ropB K Helix-turn-helix XRE-family like proteins
PAKCCMHM_00654 3e-265 pepO 3.4.24.71 O Peptidase family M13
PAKCCMHM_00655 1.4e-82 pepO 3.4.24.71 O Peptidase family M13
PAKCCMHM_00656 1.9e-234 clcA P chloride
PAKCCMHM_00657 0.0 tetP J elongation factor G
PAKCCMHM_00658 3.5e-17
PAKCCMHM_00659 2.6e-152 yitS S EDD domain protein, DegV family
PAKCCMHM_00660 1.3e-136 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PAKCCMHM_00661 7.4e-121 S Protein of unknown function (DUF975)
PAKCCMHM_00662 4.8e-114 ywnB S NAD(P)H-binding
PAKCCMHM_00663 7.3e-92 arbZ I Acyltransferase
PAKCCMHM_00664 9.7e-45 arbZ I Acyltransferase
PAKCCMHM_00665 3.9e-215 S Sterol carrier protein domain
PAKCCMHM_00667 5.3e-240 steT E amino acid
PAKCCMHM_00669 0.0
PAKCCMHM_00670 5e-215 I Protein of unknown function (DUF2974)
PAKCCMHM_00671 3.2e-169 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PAKCCMHM_00672 1.6e-244 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PAKCCMHM_00673 4.8e-76 rplI J Binds to the 23S rRNA
PAKCCMHM_00674 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PAKCCMHM_00675 2.2e-157 corA P CorA-like Mg2+ transporter protein
PAKCCMHM_00676 2.1e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PAKCCMHM_00677 7.3e-81 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PAKCCMHM_00678 9.4e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
PAKCCMHM_00679 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAKCCMHM_00680 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAKCCMHM_00681 2.2e-207 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PAKCCMHM_00682 6.1e-205 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PAKCCMHM_00683 7.7e-255 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PAKCCMHM_00684 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PAKCCMHM_00685 1.3e-60 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PAKCCMHM_00686 1.6e-149 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PAKCCMHM_00687 9.5e-251 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PAKCCMHM_00688 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PAKCCMHM_00689 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PAKCCMHM_00690 5.1e-270 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PAKCCMHM_00691 1.1e-286 clcA P chloride
PAKCCMHM_00692 4e-185 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PAKCCMHM_00693 2.7e-127 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PAKCCMHM_00694 9.8e-162 add 3.5.4.2, 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PAKCCMHM_00695 7.2e-213 pbuG S permease
PAKCCMHM_00696 2.2e-286 ade 3.5.4.2 F Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PAKCCMHM_00697 1.6e-67 S Iron-sulphur cluster biosynthesis
PAKCCMHM_00698 7.4e-66 K Acetyltransferase (GNAT) domain
PAKCCMHM_00699 9.4e-247 ynbB 4.4.1.1 P aluminum resistance
PAKCCMHM_00700 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PAKCCMHM_00701 1.2e-280 E Amino acid permease
PAKCCMHM_00702 0.0 copA 3.6.3.54 P P-type ATPase
PAKCCMHM_00703 8.3e-50 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PAKCCMHM_00704 2.9e-42 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PAKCCMHM_00705 4e-72 atkY K Penicillinase repressor
PAKCCMHM_00706 2.4e-90
PAKCCMHM_00707 5.9e-81
PAKCCMHM_00708 1.1e-66 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PAKCCMHM_00709 3.1e-73 K Bacteriophage CI repressor helix-turn-helix domain
PAKCCMHM_00710 1.1e-226 pbuG S permease
PAKCCMHM_00711 4.1e-44 I bis(5'-adenosyl)-triphosphatase activity
PAKCCMHM_00712 4.4e-231 pbuG S permease
PAKCCMHM_00713 4.3e-127 K helix_turn_helix, mercury resistance
PAKCCMHM_00714 1.5e-231 pbuG S permease
PAKCCMHM_00715 3.8e-229 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PAKCCMHM_00716 2.4e-124 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PAKCCMHM_00717 1.2e-117 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PAKCCMHM_00718 1.1e-132 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PAKCCMHM_00719 9.2e-158 yeaE S Aldo/keto reductase family
PAKCCMHM_00720 1.4e-64 S membrane transporter protein
PAKCCMHM_00721 4.2e-124 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PAKCCMHM_00722 9.8e-35 3.5.2.6 V Beta-lactamase enzyme family
PAKCCMHM_00723 1.1e-36 pts29C 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKCCMHM_00724 5.8e-149 blaA6 V Beta-lactamase
PAKCCMHM_00725 3e-193 tcsA S ABC transporter substrate-binding protein PnrA-like
PAKCCMHM_00726 1.9e-167 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
PAKCCMHM_00727 2.7e-174 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PAKCCMHM_00728 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PAKCCMHM_00729 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PAKCCMHM_00730 8.5e-182 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
PAKCCMHM_00731 4.3e-269 cydA 1.10.3.14 C ubiquinol oxidase
PAKCCMHM_00732 0.0 macB_3 V ABC transporter, ATP-binding protein
PAKCCMHM_00733 1.9e-198 S DUF218 domain
PAKCCMHM_00734 1.5e-102 S CAAX protease self-immunity
PAKCCMHM_00735 5.1e-95 S Protein of unknown function (DUF1440)
PAKCCMHM_00736 3.6e-266 G PTS system Galactitol-specific IIC component
PAKCCMHM_00740 1.2e-80 S Protein of unknown function (DUF805)
PAKCCMHM_00741 9.5e-113 S Protein of unknown function (DUF969)
PAKCCMHM_00742 2.3e-157 S Protein of unknown function (DUF979)
PAKCCMHM_00743 4.2e-118 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PAKCCMHM_00744 2.2e-29
PAKCCMHM_00746 6.8e-27
PAKCCMHM_00747 2.9e-159 mutR K Helix-turn-helix XRE-family like proteins
PAKCCMHM_00748 4.2e-251 V ABC transporter transmembrane region
PAKCCMHM_00750 3.5e-200 napA P Sodium/hydrogen exchanger family
PAKCCMHM_00751 0.0 cadA P P-type ATPase
PAKCCMHM_00752 5.7e-75 ykuL S (CBS) domain
PAKCCMHM_00753 5.8e-17
PAKCCMHM_00754 4.1e-201 ywhK S Membrane
PAKCCMHM_00755 6.6e-39
PAKCCMHM_00757 1.1e-289 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAKCCMHM_00758 3.9e-234 dltB M MBOAT, membrane-bound O-acyltransferase family
PAKCCMHM_00759 6.7e-37 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAKCCMHM_00760 9.9e-252 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PAKCCMHM_00761 1.1e-139 pbpX2 V Beta-lactamase
PAKCCMHM_00762 3.4e-214 lmrP E Major Facilitator Superfamily
PAKCCMHM_00763 3.5e-38
PAKCCMHM_00764 1.3e-230 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKCCMHM_00765 2e-169 S Alpha/beta hydrolase of unknown function (DUF915)
PAKCCMHM_00766 0.0 clpE2 O AAA domain (Cdc48 subfamily)
PAKCCMHM_00767 1e-249 yfnA E Amino Acid
PAKCCMHM_00768 6.2e-244 cycA E Amino acid permease
PAKCCMHM_00769 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PAKCCMHM_00770 6.4e-67
PAKCCMHM_00771 1.9e-103 4.1.1.44 S Carboxymuconolactone decarboxylase family
PAKCCMHM_00772 0.0 S TerB-C domain
PAKCCMHM_00773 3.5e-252 P P-loop Domain of unknown function (DUF2791)
PAKCCMHM_00774 0.0 lhr L DEAD DEAH box helicase
PAKCCMHM_00775 1.7e-190 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PAKCCMHM_00776 9e-57 S Uncharacterized protein conserved in bacteria (DUF2263)
PAKCCMHM_00777 3.7e-246 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
PAKCCMHM_00778 6.3e-162 yvgN C Aldo keto reductase
PAKCCMHM_00780 3.5e-91 K acetyltransferase
PAKCCMHM_00781 1.2e-57 psiE S Phosphate-starvation-inducible E
PAKCCMHM_00782 3.4e-59 S Putative ABC-transporter type IV
PAKCCMHM_00783 5.6e-109 M LysM domain protein
PAKCCMHM_00784 1.2e-83 M LysM domain protein
PAKCCMHM_00786 4.3e-31 yjgN S Bacterial protein of unknown function (DUF898)
PAKCCMHM_00787 4.8e-166 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
PAKCCMHM_00788 2.5e-57 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PAKCCMHM_00789 3.8e-111 K SIS domain
PAKCCMHM_00790 9.9e-166 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
PAKCCMHM_00793 7.9e-51 P Rhodanese Homology Domain
PAKCCMHM_00794 8.2e-186
PAKCCMHM_00795 3.6e-123 gntR1 K UTRA
PAKCCMHM_00796 7.4e-70 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
PAKCCMHM_00797 3.6e-129 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PAKCCMHM_00798 1.5e-200 csaB M Glycosyl transferases group 1
PAKCCMHM_00799 0.0 S Glycosyltransferase like family 2
PAKCCMHM_00800 1.8e-281 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PAKCCMHM_00801 3.4e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PAKCCMHM_00802 0.0 spoVK O ATPase family associated with various cellular activities (AAA)
PAKCCMHM_00803 0.0 pacL 3.6.3.8 P P-type ATPase
PAKCCMHM_00804 3.5e-224 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PAKCCMHM_00805 2.6e-253 epsU S Polysaccharide biosynthesis protein
PAKCCMHM_00806 2.5e-132 M Glycosyltransferase sugar-binding region containing DXD motif
PAKCCMHM_00807 1e-81 ydcK S Belongs to the SprT family
PAKCCMHM_00809 8.1e-103 S ECF transporter, substrate-specific component
PAKCCMHM_00810 1.8e-110 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
PAKCCMHM_00811 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PAKCCMHM_00812 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PAKCCMHM_00813 8.5e-207 camS S sex pheromone
PAKCCMHM_00814 3.3e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PAKCCMHM_00815 2.4e-270 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PAKCCMHM_00816 6e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PAKCCMHM_00817 1.2e-166 yegS 2.7.1.107 G Lipid kinase
PAKCCMHM_00819 3.8e-148 S hydrolase
PAKCCMHM_00820 2.1e-140 GT2,GT4 M family 8
PAKCCMHM_00821 1.2e-116 ybhL S Belongs to the BI1 family
PAKCCMHM_00822 2e-141 cbiQ P cobalt transport
PAKCCMHM_00823 0.0 ykoD P ABC transporter, ATP-binding protein
PAKCCMHM_00824 1.9e-95 S UPF0397 protein
PAKCCMHM_00825 8.3e-151 salL 2.5.1.63, 2.5.1.94 K S-adenosyl-l-methionine hydroxide adenosyltransferase
PAKCCMHM_00826 5.4e-240 nhaC C Na H antiporter NhaC
PAKCCMHM_00827 7e-127 mutF V ABC transporter, ATP-binding protein
PAKCCMHM_00828 5.8e-118 spaE S ABC-2 family transporter protein
PAKCCMHM_00829 1.9e-253 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PAKCCMHM_00830 3.4e-129 3.6.1.13, 3.6.1.55 F NUDIX domain
PAKCCMHM_00831 1.4e-267 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PAKCCMHM_00832 1.7e-104 pncA Q Isochorismatase family
PAKCCMHM_00833 6.8e-193 L Recombinase
PAKCCMHM_00834 2e-82
PAKCCMHM_00835 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
PAKCCMHM_00836 1.1e-33 copZ C Heavy-metal-associated domain
PAKCCMHM_00837 3.8e-96 dps P Belongs to the Dps family
PAKCCMHM_00838 4e-113 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
PAKCCMHM_00839 1.4e-112 ung2 3.2.2.27 L Uracil-DNA glycosylase
PAKCCMHM_00840 1.9e-40 5.1.1.13 M Asp/Glu/Hydantoin racemase
PAKCCMHM_00841 7.5e-22 5.1.1.13 M Asp/Glu/Hydantoin racemase
PAKCCMHM_00842 1e-172 L Recombinase
PAKCCMHM_00843 6.5e-49 L Protein of unknown function (DUF2800)
PAKCCMHM_00844 9.3e-212 S Protein of unknown function DUF262
PAKCCMHM_00845 6.2e-07
PAKCCMHM_00846 6.3e-193 V Beta-lactamase
PAKCCMHM_00847 2.1e-140 neo 2.7.1.87, 2.7.1.95 F Belongs to the aminoglycoside phosphotransferase family
PAKCCMHM_00848 1.5e-07 yafP 3.6.4.13 K COG COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PAKCCMHM_00850 1.8e-156 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PAKCCMHM_00851 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PAKCCMHM_00852 3.6e-55 yheA S Belongs to the UPF0342 family
PAKCCMHM_00853 2.7e-214 yhaO L Ser Thr phosphatase family protein
PAKCCMHM_00854 0.0 L AAA domain
PAKCCMHM_00855 8.7e-184 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
PAKCCMHM_00856 1e-146 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PAKCCMHM_00857 9.5e-24 S YtxH-like protein
PAKCCMHM_00858 5.2e-52
PAKCCMHM_00859 3.5e-76 hit FG Scavenger mRNA decapping enzyme C-term binding
PAKCCMHM_00860 3.7e-134 ecsA V ABC transporter, ATP-binding protein
PAKCCMHM_00861 1.8e-223 ecsB U ABC transporter
PAKCCMHM_00862 8e-125 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PAKCCMHM_00863 7.5e-59
PAKCCMHM_00864 4.4e-52 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PAKCCMHM_00865 5.9e-120 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PAKCCMHM_00867 8.6e-128 ymfC K UTRA
PAKCCMHM_00868 2.4e-253 3.5.1.18 E Peptidase family M20/M25/M40
PAKCCMHM_00869 1.1e-178 aspG 3.4.19.5, 3.5.1.1, 3.5.1.26 E Asparaginase
PAKCCMHM_00870 1e-93 S Glycine/sarcosine/betaine reductase selenoprotein B (GRDB)
PAKCCMHM_00871 2.1e-196 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKCCMHM_00872 3.3e-115 cutC P Participates in the control of copper homeostasis
PAKCCMHM_00873 5.3e-253 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PAKCCMHM_00874 1.2e-62 K UTRA
PAKCCMHM_00875 1.4e-41 K UTRA
PAKCCMHM_00876 3.5e-29 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PAKCCMHM_00877 1.3e-16 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PAKCCMHM_00878 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PAKCCMHM_00879 5e-156 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PAKCCMHM_00880 6.6e-102 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PAKCCMHM_00881 2.3e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PAKCCMHM_00882 1.3e-243 dnaB L Replication initiation and membrane attachment
PAKCCMHM_00883 6.2e-160 dnaI L Primosomal protein DnaI
PAKCCMHM_00884 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PAKCCMHM_00885 1.1e-53 K LytTr DNA-binding domain
PAKCCMHM_00886 7e-29 S Protein of unknown function (DUF3021)
PAKCCMHM_00887 4e-87 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PAKCCMHM_00888 2.4e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PAKCCMHM_00889 6.6e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PAKCCMHM_00890 3e-103 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PAKCCMHM_00891 2.5e-12 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PAKCCMHM_00892 4e-87 yqeG S HAD phosphatase, family IIIA
PAKCCMHM_00893 1e-209 yqeH S Ribosome biogenesis GTPase YqeH
PAKCCMHM_00894 8.5e-116 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PAKCCMHM_00895 3.9e-110 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PAKCCMHM_00896 3.7e-60 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PAKCCMHM_00897 6e-216 ylbM S Belongs to the UPF0348 family
PAKCCMHM_00898 1.7e-91 yceD S Uncharacterized ACR, COG1399
PAKCCMHM_00899 1.4e-130 K response regulator
PAKCCMHM_00900 3.5e-272 arlS 2.7.13.3 T Histidine kinase
PAKCCMHM_00901 1.5e-167 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PAKCCMHM_00902 1.5e-43 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PAKCCMHM_00903 9.9e-135 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PAKCCMHM_00904 3.1e-62 yodB K Transcriptional regulator, HxlR family
PAKCCMHM_00905 3.8e-201 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PAKCCMHM_00906 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PAKCCMHM_00907 2.7e-202 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PAKCCMHM_00908 4e-65 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PAKCCMHM_00909 0.0 S membrane
PAKCCMHM_00910 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
PAKCCMHM_00911 7.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PAKCCMHM_00912 4.6e-89 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PAKCCMHM_00913 3.5e-115 gluP 3.4.21.105 S Rhomboid family
PAKCCMHM_00914 7.9e-35 yqgQ S Bacterial protein of unknown function (DUF910)
PAKCCMHM_00915 4.4e-57 yqhL P Rhodanese-like protein
PAKCCMHM_00916 2.3e-18 S Protein of unknown function (DUF3042)
PAKCCMHM_00917 1.4e-167 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PAKCCMHM_00918 5.6e-258 glnA 6.3.1.2 E glutamine synthetase
PAKCCMHM_00919 3.1e-204 EGP Major facilitator Superfamily
PAKCCMHM_00920 2e-149 S haloacid dehalogenase-like hydrolase
PAKCCMHM_00922 1.3e-179 D Alpha beta
PAKCCMHM_00923 2.4e-212 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
PAKCCMHM_00924 2.1e-214 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PAKCCMHM_00925 2.4e-217 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PAKCCMHM_00926 3.1e-259 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PAKCCMHM_00927 1.9e-144 recX 2.4.1.337 GT4 S Regulatory protein RecX
PAKCCMHM_00928 2e-111 ygaC J Belongs to the UPF0374 family
PAKCCMHM_00929 1.9e-86
PAKCCMHM_00930 8.8e-78
PAKCCMHM_00931 9.8e-155 hlyX S Transporter associated domain
PAKCCMHM_00932 1.5e-302 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PAKCCMHM_00933 1.1e-43 XK27_09445 S Domain of unknown function (DUF1827)
PAKCCMHM_00934 0.0 clpE O Belongs to the ClpA ClpB family
PAKCCMHM_00935 5.9e-25
PAKCCMHM_00936 4.2e-40 ptsH G phosphocarrier protein HPR
PAKCCMHM_00937 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PAKCCMHM_00938 1.4e-63 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PAKCCMHM_00939 4e-116 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PAKCCMHM_00940 1.1e-158 coiA 3.6.4.12 S Competence protein
PAKCCMHM_00941 3.6e-103 yjbH Q Thioredoxin
PAKCCMHM_00942 4.5e-109 yjbK S CYTH
PAKCCMHM_00943 2.6e-112 yjbM 2.7.6.5 S RelA SpoT domain protein
PAKCCMHM_00944 1.3e-148 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PAKCCMHM_00945 1.4e-167 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PAKCCMHM_00946 1.7e-60 mycA 4.2.1.53 S Myosin-crossreactive antigen
PAKCCMHM_00947 5.9e-230 N Uncharacterized conserved protein (DUF2075)
PAKCCMHM_00948 6.9e-200 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PAKCCMHM_00949 1.1e-62 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PAKCCMHM_00950 4.7e-208 yubA S AI-2E family transporter
PAKCCMHM_00951 4.6e-105 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PAKCCMHM_00952 4.3e-74 WQ51_03320 S Protein of unknown function (DUF1149)
PAKCCMHM_00953 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PAKCCMHM_00954 3.3e-225 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
PAKCCMHM_00955 1.2e-225 S Peptidase M16
PAKCCMHM_00956 1.7e-128 IQ Enoyl-(Acyl carrier protein) reductase
PAKCCMHM_00957 6e-122 ymfM S Helix-turn-helix domain
PAKCCMHM_00958 3e-96 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PAKCCMHM_00959 1.4e-193 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PAKCCMHM_00960 2.7e-190 rny S Endoribonuclease that initiates mRNA decay
PAKCCMHM_00961 3.7e-117 yvyE 3.4.13.9 S YigZ family
PAKCCMHM_00962 1.3e-221 comFA L Helicase C-terminal domain protein
PAKCCMHM_00963 5.9e-123 comFC S Competence protein
PAKCCMHM_00964 5e-96 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PAKCCMHM_00965 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PAKCCMHM_00966 1.2e-183 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PAKCCMHM_00968 2e-172 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PAKCCMHM_00969 7.8e-157 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PAKCCMHM_00970 9.7e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PAKCCMHM_00971 1.5e-172 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PAKCCMHM_00972 2.4e-189 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PAKCCMHM_00973 1.3e-184 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
PAKCCMHM_00974 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PAKCCMHM_00975 1.9e-186 lacR K Transcriptional regulator
PAKCCMHM_00976 0.0 lacS G Transporter
PAKCCMHM_00977 0.0 lacZ 3.2.1.23 G -beta-galactosidase
PAKCCMHM_00978 3.7e-221 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PAKCCMHM_00979 3.2e-283 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PAKCCMHM_00980 1.5e-191 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PAKCCMHM_00981 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PAKCCMHM_00982 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PAKCCMHM_00983 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PAKCCMHM_00984 8.1e-91 S Short repeat of unknown function (DUF308)
PAKCCMHM_00985 3.5e-160 rapZ S Displays ATPase and GTPase activities
PAKCCMHM_00986 1.7e-193 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PAKCCMHM_00987 6.2e-171 whiA K May be required for sporulation
PAKCCMHM_00988 2.1e-100 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PAKCCMHM_00989 3.4e-277 ycaM E amino acid
PAKCCMHM_00991 4e-187 cggR K Putative sugar-binding domain
PAKCCMHM_00992 3.2e-189 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PAKCCMHM_00993 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PAKCCMHM_00994 1.1e-141 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PAKCCMHM_00995 4e-245 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PAKCCMHM_00996 1.9e-28 secG U Preprotein translocase
PAKCCMHM_00997 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PAKCCMHM_00998 3.3e-77 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PAKCCMHM_00999 2.3e-104 3.2.2.20 K acetyltransferase
PAKCCMHM_01000 9.2e-77
PAKCCMHM_01001 5.8e-94
PAKCCMHM_01002 2e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
PAKCCMHM_01003 2.8e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PAKCCMHM_01004 1.6e-177 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PAKCCMHM_01005 2.2e-84 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PAKCCMHM_01006 1.2e-99 dnaQ 2.7.7.7 L DNA polymerase III
PAKCCMHM_01007 4.4e-166 murB 1.3.1.98 M Cell wall formation
PAKCCMHM_01008 2.1e-202 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PAKCCMHM_01009 1.2e-130 potB P ABC transporter permease
PAKCCMHM_01010 2.9e-137 potC P ABC transporter permease
PAKCCMHM_01011 1.2e-207 potD P ABC transporter
PAKCCMHM_01012 1.3e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PAKCCMHM_01013 1.7e-171 ybbR S YbbR-like protein
PAKCCMHM_01014 1.3e-254 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PAKCCMHM_01015 1.7e-148 S Sucrose-6F-phosphate phosphohydrolase
PAKCCMHM_01016 2.7e-64 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAKCCMHM_01017 7.6e-61 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAKCCMHM_01018 1.2e-195 S Putative adhesin
PAKCCMHM_01019 3.4e-113
PAKCCMHM_01020 5.4e-144 yisY 1.11.1.10 S Alpha/beta hydrolase family
PAKCCMHM_01021 7.2e-161 znuA P Belongs to the bacterial solute-binding protein 9 family
PAKCCMHM_01022 6.2e-216 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PAKCCMHM_01023 8e-96 S VanZ like family
PAKCCMHM_01024 1.5e-132 yebC K Transcriptional regulatory protein
PAKCCMHM_01025 1.4e-178 comGA NU Type II IV secretion system protein
PAKCCMHM_01026 1.2e-172 comGB NU type II secretion system
PAKCCMHM_01027 1.2e-40 comGC U Required for transformation and DNA binding
PAKCCMHM_01028 3.5e-57
PAKCCMHM_01029 1.7e-10
PAKCCMHM_01030 1.4e-84 comGF U Putative Competence protein ComGF
PAKCCMHM_01031 1.2e-183 ytxK 2.1.1.72 L N-6 DNA Methylase
PAKCCMHM_01032 3.3e-225 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAKCCMHM_01034 0.0 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
PAKCCMHM_01035 4.6e-91 M Protein of unknown function (DUF3737)
PAKCCMHM_01036 5.6e-103 patB 4.4.1.8 E Aminotransferase, class I
PAKCCMHM_01037 3.2e-48 patB 4.4.1.8 E Aminotransferase, class I
PAKCCMHM_01038 6.9e-30 patB 4.4.1.8 E Aminotransferase, class I
PAKCCMHM_01039 2.8e-190 manA 5.3.1.8 G mannose-6-phosphate isomerase
PAKCCMHM_01040 3.9e-66 S SdpI/YhfL protein family
PAKCCMHM_01041 7.1e-127 K Transcriptional regulatory protein, C terminal
PAKCCMHM_01042 1.9e-264 T PhoQ Sensor
PAKCCMHM_01043 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PAKCCMHM_01044 2.1e-103 vanZ V VanZ like family
PAKCCMHM_01045 7.1e-261 pgi 5.3.1.9 G Belongs to the GPI family
PAKCCMHM_01046 5.7e-45 EGP Major facilitator Superfamily
PAKCCMHM_01047 1e-84 EGP Major facilitator Superfamily
PAKCCMHM_01048 7.2e-69
PAKCCMHM_01051 3.4e-191 ampC V Beta-lactamase
PAKCCMHM_01052 2.3e-52 yveB 2.7.4.29 I PAP2 superfamily
PAKCCMHM_01053 1.7e-146 pstS P Phosphate
PAKCCMHM_01054 5.3e-135 pstC P probably responsible for the translocation of the substrate across the membrane
PAKCCMHM_01055 7.9e-152 pstA P Phosphate transport system permease protein PstA
PAKCCMHM_01056 3e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAKCCMHM_01057 4.3e-107 phoU P Plays a role in the regulation of phosphate uptake
PAKCCMHM_01058 3.4e-118 T Transcriptional regulatory protein, C terminal
PAKCCMHM_01059 1.7e-280 phoR 2.7.13.3 T Histidine kinase
PAKCCMHM_01060 1.2e-11 xerC L Phage integrase, N-terminal SAM-like domain
PAKCCMHM_01061 1.8e-41 xerC L Phage integrase, N-terminal SAM-like domain
PAKCCMHM_01062 1.1e-54 D Cellulose biosynthesis protein BcsQ
PAKCCMHM_01064 1.1e-204 L Transposase DDE domain
PAKCCMHM_01065 9.3e-261 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain
PAKCCMHM_01066 6e-111 tdk 2.7.1.21 F thymidine kinase
PAKCCMHM_01067 1e-196 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PAKCCMHM_01068 1.3e-154 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PAKCCMHM_01069 7.5e-183 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PAKCCMHM_01070 2.6e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PAKCCMHM_01071 5e-128 atpB C it plays a direct role in the translocation of protons across the membrane
PAKCCMHM_01072 4.7e-26 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAKCCMHM_01073 3.1e-52 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PAKCCMHM_01074 3.1e-90 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAKCCMHM_01075 6.7e-284 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PAKCCMHM_01076 1.2e-169 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PAKCCMHM_01077 4.5e-245 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PAKCCMHM_01078 1.2e-71 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PAKCCMHM_01079 2e-30 ywzB S Protein of unknown function (DUF1146)
PAKCCMHM_01080 1.7e-179 mbl D Cell shape determining protein MreB Mrl
PAKCCMHM_01081 6.8e-13 S DNA-directed RNA polymerase subunit beta
PAKCCMHM_01082 2.6e-51 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PAKCCMHM_01083 6.6e-34 S Protein of unknown function (DUF2969)
PAKCCMHM_01084 1.2e-222 rodA D Belongs to the SEDS family
PAKCCMHM_01085 1.5e-80 usp6 T universal stress protein
PAKCCMHM_01087 1.2e-233 rarA L recombination factor protein RarA
PAKCCMHM_01088 8.6e-81 yueI S Protein of unknown function (DUF1694)
PAKCCMHM_01089 1e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PAKCCMHM_01091 2.1e-289 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PAKCCMHM_01092 6.6e-215 iscS2 2.8.1.7 E Aminotransferase class V
PAKCCMHM_01093 1.4e-228 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PAKCCMHM_01094 7.8e-118 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PAKCCMHM_01095 0.0 3.6.3.8 P P-type ATPase
PAKCCMHM_01096 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PAKCCMHM_01097 6.1e-230 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PAKCCMHM_01098 1.7e-122 S Haloacid dehalogenase-like hydrolase
PAKCCMHM_01099 4.4e-109 radC L DNA repair protein
PAKCCMHM_01100 7.8e-164 mreB D cell shape determining protein MreB
PAKCCMHM_01101 1.8e-140 mreC M Involved in formation and maintenance of cell shape
PAKCCMHM_01102 1.6e-94 mreD
PAKCCMHM_01103 3.6e-13 S Protein of unknown function (DUF4044)
PAKCCMHM_01104 1.3e-51 S Protein of unknown function (DUF3397)
PAKCCMHM_01105 1.6e-76 mraZ K Belongs to the MraZ family
PAKCCMHM_01106 3.2e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PAKCCMHM_01107 2.4e-54 ftsL D Cell division protein FtsL
PAKCCMHM_01108 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PAKCCMHM_01109 5.4e-178 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PAKCCMHM_01110 4e-259 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PAKCCMHM_01111 1.8e-209 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PAKCCMHM_01112 5.8e-152 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PAKCCMHM_01113 2.3e-238 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PAKCCMHM_01114 9.9e-242 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PAKCCMHM_01115 8.4e-62 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PAKCCMHM_01116 1.3e-26 yggT S YGGT family
PAKCCMHM_01117 1.7e-145 ylmH S S4 domain protein
PAKCCMHM_01118 1.8e-83 gpsB D DivIVA domain protein
PAKCCMHM_01119 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PAKCCMHM_01120 2.3e-33 cspA K 'Cold-shock' DNA-binding domain
PAKCCMHM_01121 4.1e-101 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PAKCCMHM_01122 1e-31
PAKCCMHM_01123 3.5e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PAKCCMHM_01124 1.2e-211 iscS 2.8.1.7 E Aminotransferase class V
PAKCCMHM_01125 2.1e-57 XK27_04120 S Putative amino acid metabolism
PAKCCMHM_01126 7.4e-219 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PAKCCMHM_01127 4.4e-123 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PAKCCMHM_01128 4.8e-114 S Repeat protein
PAKCCMHM_01129 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PAKCCMHM_01130 1.5e-161 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PAKCCMHM_01131 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PAKCCMHM_01132 2.3e-34 ykzG S Belongs to the UPF0356 family
PAKCCMHM_01133 5.2e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PAKCCMHM_01134 0.0 typA T GTP-binding protein TypA
PAKCCMHM_01135 1.1e-209 ftsW D Belongs to the SEDS family
PAKCCMHM_01136 3.7e-49 ylbG S UPF0298 protein
PAKCCMHM_01137 2.5e-95 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PAKCCMHM_01138 2.4e-84 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PAKCCMHM_01139 9e-184 ylbL T Belongs to the peptidase S16 family
PAKCCMHM_01140 3.1e-79 comEA L Competence protein ComEA
PAKCCMHM_01141 0.0 comEC S Competence protein ComEC
PAKCCMHM_01142 2.4e-173 holA 2.7.7.7 L DNA polymerase III delta subunit
PAKCCMHM_01143 7.5e-34 rpsT J Binds directly to 16S ribosomal RNA
PAKCCMHM_01144 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PAKCCMHM_01145 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PAKCCMHM_01146 8.8e-156
PAKCCMHM_01147 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PAKCCMHM_01148 2.2e-201 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PAKCCMHM_01149 2.5e-231 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PAKCCMHM_01150 2.6e-103 engB D Necessary for normal cell division and for the maintenance of normal septation
PAKCCMHM_01151 3.5e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PAKCCMHM_01152 7.1e-76
PAKCCMHM_01154 2.3e-28 frnE Q DSBA-like thioredoxin domain
PAKCCMHM_01155 7.3e-56 frnE Q DSBA-like thioredoxin domain
PAKCCMHM_01156 1.7e-77 S Domain of unknown function (DUF4767)
PAKCCMHM_01157 7.3e-215
PAKCCMHM_01158 3.2e-149 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PAKCCMHM_01159 5.2e-140 epsB M biosynthesis protein
PAKCCMHM_01160 1.7e-123 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PAKCCMHM_01161 8.8e-139 ywqE 3.1.3.48 GM PHP domain protein
PAKCCMHM_01162 1.4e-116 rfbP M Bacterial sugar transferase
PAKCCMHM_01163 2.9e-81 cpsF M Oligosaccharide biosynthesis protein Alg14 like
PAKCCMHM_01164 7.8e-80 pssE S Glycosyltransferase family 28 C-terminal domain
PAKCCMHM_01165 2.1e-126 M Glycosyltransferase sugar-binding region containing DXD motif
PAKCCMHM_01166 1.5e-126 M Glycosyl transferase family 2
PAKCCMHM_01167 4.4e-101 2.7.8.12 GT2 S glycosyl transferase family 2
PAKCCMHM_01168 5.3e-131 M Glycosyl transferase family 2
PAKCCMHM_01169 3e-201 glf 5.4.99.9 M UDP-galactopyranose mutase
PAKCCMHM_01170 1.2e-91
PAKCCMHM_01171 2.4e-230 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
PAKCCMHM_01172 1e-150 S Acyltransferase family
PAKCCMHM_01173 1.3e-29 S Transposase C of IS166 homeodomain
PAKCCMHM_01174 4.7e-112 L Transposase IS66 family
PAKCCMHM_01175 3.4e-51 L Transposase IS66 family
PAKCCMHM_01177 5.9e-109 L Reverse transcriptase (RNA-dependent DNA polymerase)
PAKCCMHM_01178 1.8e-27 L Reverse transcriptase (RNA-dependent DNA polymerase)
PAKCCMHM_01179 1.2e-134
PAKCCMHM_01180 4.3e-174 D nuclear chromosome segregation
PAKCCMHM_01181 8.1e-122 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PAKCCMHM_01183 7.5e-138 L Reverse transcriptase (RNA-dependent DNA polymerase)
PAKCCMHM_01184 2.7e-142 htpX O Peptidase family M48
PAKCCMHM_01187 7.3e-62
PAKCCMHM_01188 1.9e-77 mutT 3.6.1.55 F NUDIX domain
PAKCCMHM_01189 6.3e-37
PAKCCMHM_01190 2.6e-65
PAKCCMHM_01191 1.1e-65 S Domain of unknown function DUF1828
PAKCCMHM_01192 2.6e-91 S Rib/alpha-like repeat
PAKCCMHM_01194 5.5e-245 yagE E amino acid
PAKCCMHM_01195 1.7e-148 xerD L Phage integrase, N-terminal SAM-like domain
PAKCCMHM_01196 2.7e-90 dedA 3.1.3.1 S SNARE associated Golgi protein
PAKCCMHM_01197 5e-173 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
PAKCCMHM_01198 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PAKCCMHM_01199 2.7e-241 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PAKCCMHM_01200 0.0 oatA I Acyltransferase
PAKCCMHM_01201 8.9e-178 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PAKCCMHM_01202 1.8e-142 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PAKCCMHM_01203 7.5e-47 yrvD S Lipopolysaccharide assembly protein A domain
PAKCCMHM_01204 1e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PAKCCMHM_01205 1.5e-302 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PAKCCMHM_01206 6.9e-27 S Protein of unknown function (DUF2929)
PAKCCMHM_01207 0.0 dnaE 2.7.7.7 L DNA polymerase
PAKCCMHM_01208 1.8e-181 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PAKCCMHM_01209 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PAKCCMHM_01210 4.8e-165 cvfB S S1 domain
PAKCCMHM_01211 3.1e-164 xerD D recombinase XerD
PAKCCMHM_01212 5.3e-62 ribT K acetyltransferase
PAKCCMHM_01213 4.1e-133 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PAKCCMHM_01214 6.4e-105 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PAKCCMHM_01215 2.6e-129 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PAKCCMHM_01216 2.5e-61 M Lysin motif
PAKCCMHM_01217 6.4e-97 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PAKCCMHM_01218 2.1e-117 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PAKCCMHM_01219 1.3e-218 rpsA 1.17.7.4 J Ribosomal protein S1
PAKCCMHM_01220 5.3e-245 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PAKCCMHM_01221 6.7e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PAKCCMHM_01222 1.2e-230 S Tetratricopeptide repeat protein
PAKCCMHM_01224 1.3e-285 hsdM 2.1.1.72 V type I restriction-modification system
PAKCCMHM_01225 3.3e-175 L Belongs to the 'phage' integrase family
PAKCCMHM_01226 0.0 hsdR 3.1.21.3 V EcoEI R protein C-terminal
PAKCCMHM_01228 2.3e-130 mrr L restriction endonuclease
PAKCCMHM_01229 1.8e-08
PAKCCMHM_01231 3.7e-54 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
PAKCCMHM_01232 0.0 L Helicase C-terminal domain protein
PAKCCMHM_01233 4.6e-62 2.5.1.74 H UbiA prenyltransferase family
PAKCCMHM_01234 1.9e-161 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PAKCCMHM_01235 5.6e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PAKCCMHM_01236 7.6e-115 hlyIII S protein, hemolysin III
PAKCCMHM_01237 1.4e-145 DegV S Uncharacterised protein, DegV family COG1307
PAKCCMHM_01238 1.6e-35 yozE S Belongs to the UPF0346 family
PAKCCMHM_01239 2e-261 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
PAKCCMHM_01240 1.2e-157 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PAKCCMHM_01241 7e-133 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PAKCCMHM_01242 1.1e-153 dprA LU DNA protecting protein DprA
PAKCCMHM_01243 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PAKCCMHM_01244 6.7e-248 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PAKCCMHM_01245 6.8e-170 xerC D Phage integrase, N-terminal SAM-like domain
PAKCCMHM_01246 4.3e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PAKCCMHM_01247 2.4e-251 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PAKCCMHM_01248 3.2e-177 lacX 5.1.3.3 G Aldose 1-epimerase
PAKCCMHM_01249 5.2e-94 K LysR substrate binding domain
PAKCCMHM_01250 4.1e-101 S LexA-binding, inner membrane-associated putative hydrolase
PAKCCMHM_01252 7.2e-72
PAKCCMHM_01253 1.4e-176 MA20_14895 S Conserved hypothetical protein 698
PAKCCMHM_01254 1.1e-81 K Transcriptional regulator
PAKCCMHM_01255 4.5e-82 XK26_02160 S Pyridoxamine 5'-phosphate oxidase
PAKCCMHM_01256 2.7e-277 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
PAKCCMHM_01257 1.8e-69 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
PAKCCMHM_01258 6.2e-48 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
PAKCCMHM_01259 5.5e-63 S Protein of unknown function (DUF3021)
PAKCCMHM_01260 4.4e-71 K LytTr DNA-binding domain
PAKCCMHM_01261 4.7e-106 sprD D Domain of Unknown Function (DUF1542)
PAKCCMHM_01262 3.8e-109 S Protein of unknown function (DUF1211)
PAKCCMHM_01263 1.7e-75 S reductase
PAKCCMHM_01264 5.8e-106 yihX 3.1.3.10, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PAKCCMHM_01265 2.6e-117 3.6.1.55 F NUDIX domain
PAKCCMHM_01266 5.9e-126 T Transcriptional regulatory protein, C terminal
PAKCCMHM_01267 3.3e-234 T GHKL domain
PAKCCMHM_01268 7.7e-88 S Peptidase propeptide and YPEB domain
PAKCCMHM_01269 8e-150 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PAKCCMHM_01270 2.7e-60 S Putative adhesin
PAKCCMHM_01271 7.8e-247 brnQ U Component of the transport system for branched-chain amino acids
PAKCCMHM_01272 5.2e-184 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PAKCCMHM_01273 1.6e-252 lysC 2.7.2.4 E Belongs to the aspartokinase family
PAKCCMHM_01274 4.3e-247 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PAKCCMHM_01275 2.2e-75 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PAKCCMHM_01276 1.3e-191 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PAKCCMHM_01277 4.6e-174 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PAKCCMHM_01278 8.6e-142 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PAKCCMHM_01279 1.2e-216 aspC 2.6.1.1 E Aminotransferase
PAKCCMHM_01280 1.7e-196 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PAKCCMHM_01281 3.2e-144 sufC O FeS assembly ATPase SufC
PAKCCMHM_01282 5.3e-223 sufD O FeS assembly protein SufD
PAKCCMHM_01283 1.3e-229 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PAKCCMHM_01284 2.7e-79 nifU C SUF system FeS assembly protein, NifU family
PAKCCMHM_01285 3.8e-273 sufB O assembly protein SufB
PAKCCMHM_01286 2.8e-54 yitW S Iron-sulfur cluster assembly protein
PAKCCMHM_01287 5.6e-43 mntH P H( )-stimulated, divalent metal cation uptake system
PAKCCMHM_01288 6.6e-14 mntH P H( )-stimulated, divalent metal cation uptake system
PAKCCMHM_01289 5.6e-159 mntH P H( )-stimulated, divalent metal cation uptake system
PAKCCMHM_01290 6.7e-136 H Nodulation protein S (NodS)
PAKCCMHM_01291 5.1e-19 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
PAKCCMHM_01292 2.2e-85 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAKCCMHM_01293 8.8e-10 S PFAM Archaeal ATPase
PAKCCMHM_01294 9.4e-18 S PFAM Archaeal ATPase
PAKCCMHM_01295 2.2e-135 S PFAM Archaeal ATPase
PAKCCMHM_01296 0.0 uvrA3 L excinuclease ABC, A subunit
PAKCCMHM_01297 1.1e-176 XK27_00915 C Luciferase-like monooxygenase
PAKCCMHM_01299 6.9e-40 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PAKCCMHM_01300 6.1e-152 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PAKCCMHM_01301 6.2e-150 yufQ S Belongs to the binding-protein-dependent transport system permease family
PAKCCMHM_01302 1.8e-164 yufP S Belongs to the binding-protein-dependent transport system permease family
PAKCCMHM_01303 6.9e-220 xylG 3.6.3.17 S ABC transporter
PAKCCMHM_01304 2.9e-172 tcsA S ABC transporter substrate-binding protein PnrA-like
PAKCCMHM_01305 2.2e-14 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PAKCCMHM_01306 7.5e-92 GM Belongs to the short-chain dehydrogenases reductases (SDR) family
PAKCCMHM_01307 1e-25 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PAKCCMHM_01308 1.5e-32 L COG2826 Transposase and inactivated derivatives, IS30 family
PAKCCMHM_01309 8.5e-87 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PAKCCMHM_01310 1.4e-74 yphH S Cupin domain
PAKCCMHM_01311 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PAKCCMHM_01312 2.2e-70 K helix_turn_helix multiple antibiotic resistance protein
PAKCCMHM_01313 0.0 lmrA 3.6.3.44 V ABC transporter
PAKCCMHM_01314 3.9e-153 C Aldo keto reductase
PAKCCMHM_01315 1.8e-58 K Transcriptional regulator
PAKCCMHM_01316 1.6e-233 yrvN L AAA C-terminal domain
PAKCCMHM_01318 1.1e-13 GM NmrA-like family
PAKCCMHM_01319 6.5e-73 S Putative inner membrane protein (DUF1819)
PAKCCMHM_01320 1.9e-85 S Domain of unknown function (DUF1788)
PAKCCMHM_01321 7.6e-220 FbpA 3.1.21.3, 3.2.1.170 GH38 K RNA-binding protein homologous to eukaryotic snRNP
PAKCCMHM_01322 0.0 2.1.1.72 LV Eco57I restriction-modification methylase
PAKCCMHM_01323 6.8e-96 LO the current gene model (or a revised gene model) may contain a frame shift
PAKCCMHM_01325 7.3e-23 S Protein of unknown function (DUF3644)
PAKCCMHM_01326 0.0 S PglZ domain
PAKCCMHM_01327 4.1e-07 K transcriptional regulator
PAKCCMHM_01328 1.9e-60 ybhL S Belongs to the BI1 family
PAKCCMHM_01329 3.4e-27
PAKCCMHM_01330 7e-136
PAKCCMHM_01331 2.5e-228 S ABC-2 family transporter protein
PAKCCMHM_01332 1.7e-154 V ATPases associated with a variety of cellular activities
PAKCCMHM_01333 4.9e-78 akr5f 1.1.1.346 S reductase
PAKCCMHM_01334 2.2e-108 lacA 2.3.1.79 S Transferase hexapeptide repeat
PAKCCMHM_01335 8.3e-114 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PAKCCMHM_01336 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PAKCCMHM_01337 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PAKCCMHM_01338 2.3e-24 K Transcriptional regulator
PAKCCMHM_01339 5.6e-58 K Transcriptional regulator
PAKCCMHM_01340 2.8e-171 ppaC 3.6.1.1 C inorganic pyrophosphatase
PAKCCMHM_01341 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PAKCCMHM_01342 1.3e-110 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PAKCCMHM_01343 4.4e-121 yoaK S Protein of unknown function (DUF1275)
PAKCCMHM_01344 2.3e-201 xerS L Belongs to the 'phage' integrase family
PAKCCMHM_01345 3.9e-151 K Transcriptional regulator
PAKCCMHM_01346 2.5e-150
PAKCCMHM_01347 6.5e-162 degV S EDD domain protein, DegV family
PAKCCMHM_01348 1.4e-63
PAKCCMHM_01349 0.0 FbpA K Fibronectin-binding protein
PAKCCMHM_01350 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
PAKCCMHM_01351 2.5e-192 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PAKCCMHM_01352 2.3e-170 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PAKCCMHM_01353 3.7e-76 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PAKCCMHM_01354 2.8e-310 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PAKCCMHM_01355 1.6e-55
PAKCCMHM_01356 6.5e-87 degV S DegV family
PAKCCMHM_01357 2.1e-213 I transferase activity, transferring acyl groups other than amino-acyl groups
PAKCCMHM_01358 6.3e-240 cpdA S Calcineurin-like phosphoesterase
PAKCCMHM_01359 6e-213 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PAKCCMHM_01360 1.4e-69 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PAKCCMHM_01361 5.3e-101 ypsA S Belongs to the UPF0398 family
PAKCCMHM_01362 1.3e-113 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PAKCCMHM_01363 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PAKCCMHM_01364 1.8e-113 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PAKCCMHM_01365 1.5e-112 dnaD L DnaD domain protein
PAKCCMHM_01366 1.9e-258 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PAKCCMHM_01367 4.5e-88 ypmB S Protein conserved in bacteria
PAKCCMHM_01368 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PAKCCMHM_01369 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PAKCCMHM_01370 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PAKCCMHM_01371 1e-165 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
PAKCCMHM_01372 1.5e-172 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PAKCCMHM_01373 4.3e-200 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PAKCCMHM_01374 6.3e-185 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PAKCCMHM_01375 3.3e-198 V ABC-type multidrug transport system, ATPase and permease components
PAKCCMHM_01376 3e-143 G Transmembrane secretion effector
PAKCCMHM_01377 4.1e-48 G Transmembrane secretion effector
PAKCCMHM_01378 3.4e-149 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
PAKCCMHM_01379 4e-159 rbsU U ribose uptake protein RbsU
PAKCCMHM_01380 5.6e-65 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PAKCCMHM_01381 7.9e-149 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PAKCCMHM_01382 3.2e-72 5.4.2.11 G Phosphoglycerate mutase family
PAKCCMHM_01383 3e-78 6.3.3.2 S ASCH
PAKCCMHM_01384 9.5e-141 2.4.2.3 F Phosphorylase superfamily
PAKCCMHM_01385 4.8e-56 2.4.2.3 F Phosphorylase superfamily
PAKCCMHM_01386 1.5e-17 2.4.2.3 F Phosphorylase superfamily
PAKCCMHM_01387 5.4e-83 3.6.1.55 F NUDIX domain
PAKCCMHM_01388 2.8e-143 2.7.1.89 M Phosphotransferase enzyme family
PAKCCMHM_01389 4.5e-75 S AAA domain
PAKCCMHM_01390 2.5e-128 yxaM EGP Major facilitator Superfamily
PAKCCMHM_01391 1e-17 XK27_07525 3.6.1.55 F NUDIX domain
PAKCCMHM_01392 8.9e-84 2.3.1.57 K Acetyltransferase (GNAT) family
PAKCCMHM_01393 3.1e-87 rimL J Acetyltransferase (GNAT) domain
PAKCCMHM_01394 9.9e-36 aroD S Serine hydrolase (FSH1)
PAKCCMHM_01395 5.3e-45
PAKCCMHM_01396 4.9e-285 V ABC-type multidrug transport system, ATPase and permease components
PAKCCMHM_01397 3.5e-182 P ABC transporter
PAKCCMHM_01398 6.2e-133 qmcA O prohibitin homologues
PAKCCMHM_01399 3.2e-35 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PAKCCMHM_01400 5.9e-192 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PAKCCMHM_01401 4.9e-28 S SnoaL-like domain
PAKCCMHM_01402 1.9e-72 drgA C nitroreductase
PAKCCMHM_01403 1.5e-10 drgA C nitroreductase
PAKCCMHM_01404 0.0 pepO 3.4.24.71 O Peptidase family M13
PAKCCMHM_01405 3.3e-24 M Belongs to the glycosyl hydrolase 28 family
PAKCCMHM_01406 9.3e-25 M Belongs to the glycosyl hydrolase 28 family
PAKCCMHM_01408 3.6e-66 XK27_06780 V ABC transporter permease
PAKCCMHM_01409 4.8e-91 XK27_06780 V ABC transporter permease
PAKCCMHM_01410 7.4e-153 M Glycosyl transferases group 1
PAKCCMHM_01411 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PAKCCMHM_01412 7e-106 pncA Q Isochorismatase family
PAKCCMHM_01413 8.1e-91 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PAKCCMHM_01414 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PAKCCMHM_01415 4.8e-207 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PAKCCMHM_01416 2.7e-233 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PAKCCMHM_01417 2e-180 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PAKCCMHM_01418 8.7e-93 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PAKCCMHM_01419 1.2e-166 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PAKCCMHM_01420 7.1e-127 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PAKCCMHM_01421 2.5e-115 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PAKCCMHM_01422 9.9e-294 I Protein of unknown function (DUF2974)
PAKCCMHM_01423 7.1e-147 yxeH S hydrolase
PAKCCMHM_01424 1.3e-164 XK27_05540 S DUF218 domain
PAKCCMHM_01426 5.5e-35 ybjQ S Belongs to the UPF0145 family
PAKCCMHM_01427 2.5e-261 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
PAKCCMHM_01428 1.5e-172
PAKCCMHM_01429 8.6e-128
PAKCCMHM_01430 3.1e-101 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PAKCCMHM_01431 4.7e-22
PAKCCMHM_01432 8.3e-135
PAKCCMHM_01433 9.6e-144
PAKCCMHM_01434 2.9e-120 skfE V ATPases associated with a variety of cellular activities
PAKCCMHM_01435 1.1e-57 yvoA_1 K Transcriptional regulator, GntR family
PAKCCMHM_01436 8.6e-245 pepT 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PAKCCMHM_01437 6.7e-150 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PAKCCMHM_01438 1.1e-116 trmK 2.1.1.217 S SAM-dependent methyltransferase
PAKCCMHM_01439 8.2e-138 cjaA ET ABC transporter substrate-binding protein
PAKCCMHM_01440 5.9e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PAKCCMHM_01441 6.6e-106 P ABC transporter permease
PAKCCMHM_01442 2.9e-114 papP P ABC transporter, permease protein
PAKCCMHM_01443 1.1e-198 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PAKCCMHM_01444 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PAKCCMHM_01445 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PAKCCMHM_01446 2.7e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PAKCCMHM_01447 4.9e-134 recO L Involved in DNA repair and RecF pathway recombination
PAKCCMHM_01448 3.6e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PAKCCMHM_01449 5.7e-81 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PAKCCMHM_01450 2e-172 phoH T phosphate starvation-inducible protein PhoH
PAKCCMHM_01451 2.9e-33 yqeY S YqeY-like protein
PAKCCMHM_01452 1.5e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PAKCCMHM_01453 2.5e-155 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PAKCCMHM_01454 5.4e-50 S Iron-sulfur cluster assembly protein
PAKCCMHM_01455 3.6e-152 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PAKCCMHM_01456 2.1e-120 sdaAB 4.3.1.17 E Serine dehydratase beta chain
PAKCCMHM_01457 4.5e-155 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PAKCCMHM_01458 9e-101 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PAKCCMHM_01459 2.9e-134 E GDSL-like Lipase/Acylhydrolase family
PAKCCMHM_01460 1.3e-78 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PAKCCMHM_01461 8.3e-221 patA 2.6.1.1 E Aminotransferase
PAKCCMHM_01462 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PAKCCMHM_01463 3.4e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
PAKCCMHM_01464 9e-72 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PAKCCMHM_01465 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PAKCCMHM_01466 3e-63
PAKCCMHM_01467 6.3e-171 prmA J Ribosomal protein L11 methyltransferase
PAKCCMHM_01468 1.1e-81 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PAKCCMHM_01469 2.1e-302 S Bacterial membrane protein, YfhO
PAKCCMHM_01470 0.0 aha1 P E1-E2 ATPase
PAKCCMHM_01471 4.1e-184 ansA 3.5.1.1 EJ L-asparaginase, type I
PAKCCMHM_01472 7.5e-242 yjjP S Putative threonine/serine exporter
PAKCCMHM_01473 2.2e-168 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PAKCCMHM_01474 5.2e-259 frdC 1.3.5.4 C FAD binding domain
PAKCCMHM_01475 7.7e-266 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PAKCCMHM_01476 1.2e-65 metI P ABC transporter permease
PAKCCMHM_01477 1.1e-184 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PAKCCMHM_01478 2.8e-154 metQ1 P Belongs to the nlpA lipoprotein family
PAKCCMHM_01479 6.7e-53 L nuclease
PAKCCMHM_01480 3.9e-140 F DNA/RNA non-specific endonuclease
PAKCCMHM_01481 2.5e-47 K Helix-turn-helix domain
PAKCCMHM_01482 2.1e-185 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAKCCMHM_01483 6.3e-304 ybiT S ABC transporter, ATP-binding protein
PAKCCMHM_01485 8.1e-246 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PAKCCMHM_01486 2.2e-102 3.6.1.27 I Acid phosphatase homologues
PAKCCMHM_01487 3e-170 S N-acetylmuramoyl-L-alanine amidase activity
PAKCCMHM_01488 8.8e-58 S Bacteriophage holin of superfamily 6 (Holin_LLH)
PAKCCMHM_01492 1.3e-230 S Calcineurin-like phosphoesterase
PAKCCMHM_01493 4e-63
PAKCCMHM_01494 0.0 M Prophage endopeptidase tail
PAKCCMHM_01495 2.1e-143 S phage tail
PAKCCMHM_01496 0.0 sca1 3.4.21.96 D SLT domain
PAKCCMHM_01499 3.5e-100 S Phage tail tube protein
PAKCCMHM_01500 1.3e-23
PAKCCMHM_01501 6.3e-44 S exonuclease activity
PAKCCMHM_01503 3.5e-64 S Phage gp6-like head-tail connector protein
PAKCCMHM_01504 9.5e-172
PAKCCMHM_01505 3.6e-81 S Domain of unknown function (DUF4355)
PAKCCMHM_01507 9e-175 S head morphogenesis protein, SPP1 gp7 family
PAKCCMHM_01508 1.4e-272 S Phage portal protein, SPP1 Gp6-like
PAKCCMHM_01509 2.7e-238 S Phage terminase, large subunit
PAKCCMHM_01510 5.3e-75 xtmA L Terminase small subunit
PAKCCMHM_01511 1.7e-119
PAKCCMHM_01512 5.5e-92 S Super-infection exclusion protein B
PAKCCMHM_01514 3.6e-13
PAKCCMHM_01516 9.2e-67 S Endodeoxyribonuclease RusA
PAKCCMHM_01518 5.1e-08
PAKCCMHM_01520 1.7e-60 S IstB-like ATP binding protein
PAKCCMHM_01521 1.6e-34 yfdO K Conserved phage C-terminus (Phg_2220_C)
PAKCCMHM_01522 3e-45 S Protein of unknown function (DUF1071)
PAKCCMHM_01523 2.2e-34 S Siphovirus Gp157
PAKCCMHM_01524 4.6e-25
PAKCCMHM_01525 1.4e-19
PAKCCMHM_01526 2.8e-31
PAKCCMHM_01528 7.1e-30 K Cro/C1-type HTH DNA-binding domain
PAKCCMHM_01529 1.2e-12
PAKCCMHM_01531 3e-28
PAKCCMHM_01532 7e-99 K ORF6N domain
PAKCCMHM_01533 2.2e-14 K sequence-specific DNA binding
PAKCCMHM_01534 1.9e-22 2.6.1.2, 2.6.1.66 K Helix-turn-helix XRE-family like proteins
PAKCCMHM_01535 1.8e-45 E Zn peptidase
PAKCCMHM_01536 4.1e-66 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PAKCCMHM_01537 8.3e-20
PAKCCMHM_01538 1.6e-91
PAKCCMHM_01539 3.3e-222 sip L Belongs to the 'phage' integrase family
PAKCCMHM_01540 5.4e-59 lysR5 K LysR substrate binding domain
PAKCCMHM_01541 9.2e-34 lysR5 K LysR substrate binding domain
PAKCCMHM_01542 0.0 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
PAKCCMHM_01543 3.1e-248 G Major Facilitator
PAKCCMHM_01544 9.9e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PAKCCMHM_01545 3.7e-187 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PAKCCMHM_01546 1.3e-279 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PAKCCMHM_01547 4.3e-275 yjeM E Amino Acid
PAKCCMHM_01548 1.4e-95 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PAKCCMHM_01549 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PAKCCMHM_01550 1.2e-123 srtA 3.4.22.70 M sortase family
PAKCCMHM_01551 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PAKCCMHM_01552 1.8e-172 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PAKCCMHM_01553 0.0 dnaK O Heat shock 70 kDa protein
PAKCCMHM_01554 4.2e-77 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PAKCCMHM_01555 4.7e-191 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PAKCCMHM_01556 7.9e-22 S GyrI-like small molecule binding domain
PAKCCMHM_01557 5e-30 S GyrI-like small molecule binding domain
PAKCCMHM_01558 1.7e-274 lsa S ABC transporter
PAKCCMHM_01559 9.6e-172 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PAKCCMHM_01560 8.8e-167 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PAKCCMHM_01561 3.5e-61 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PAKCCMHM_01562 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PAKCCMHM_01563 1.6e-46 rplGA J ribosomal protein
PAKCCMHM_01564 9.8e-46 ylxR K Protein of unknown function (DUF448)
PAKCCMHM_01565 5.2e-218 nusA K Participates in both transcription termination and antitermination
PAKCCMHM_01566 2e-80 rimP J Required for maturation of 30S ribosomal subunits
PAKCCMHM_01567 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAKCCMHM_01568 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PAKCCMHM_01569 1.5e-228 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PAKCCMHM_01570 2e-138 cdsA 2.7.7.41 S Belongs to the CDS family
PAKCCMHM_01571 2.5e-135 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PAKCCMHM_01572 2.6e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PAKCCMHM_01573 1.8e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PAKCCMHM_01574 9.1e-184 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PAKCCMHM_01575 5.8e-138 rpsB J Belongs to the universal ribosomal protein uS2 family
PAKCCMHM_01576 6.3e-193 yabB 2.1.1.223 L Methyltransferase small domain
PAKCCMHM_01577 4.9e-116 plsC 2.3.1.51 I Acyltransferase
PAKCCMHM_01578 0.0 mdlA V ABC transporter
PAKCCMHM_01579 1.9e-30 yneF S Uncharacterised protein family (UPF0154)
PAKCCMHM_01580 9.4e-34 ynzC S UPF0291 protein
PAKCCMHM_01581 2.3e-113 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PAKCCMHM_01582 1.7e-116 ung2 3.2.2.27 L Uracil-DNA glycosylase
PAKCCMHM_01583 3.9e-72 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
PAKCCMHM_01584 2.3e-116 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PAKCCMHM_01585 1e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PAKCCMHM_01586 1.7e-136 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PAKCCMHM_01587 3.1e-95 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PAKCCMHM_01588 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PAKCCMHM_01589 1.1e-227 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PAKCCMHM_01590 4.9e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PAKCCMHM_01591 1.8e-283 pipD E Dipeptidase
PAKCCMHM_01592 2.5e-165 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PAKCCMHM_01593 0.0 smc D Required for chromosome condensation and partitioning
PAKCCMHM_01594 1.1e-121 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PAKCCMHM_01595 0.0 oppA E ABC transporter substrate-binding protein
PAKCCMHM_01596 0.0 oppA E ABC transporter substrate-binding protein
PAKCCMHM_01597 1.3e-160 oppC P Binding-protein-dependent transport system inner membrane component
PAKCCMHM_01598 2e-177 oppB P ABC transporter permease
PAKCCMHM_01599 1.7e-176 oppF P Belongs to the ABC transporter superfamily
PAKCCMHM_01600 1.2e-191 oppD P Belongs to the ABC transporter superfamily
PAKCCMHM_01601 4.4e-36 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PAKCCMHM_01602 5.1e-179 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PAKCCMHM_01603 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PAKCCMHM_01604 1.4e-303 yloV S DAK2 domain fusion protein YloV
PAKCCMHM_01605 4e-57 asp S Asp23 family, cell envelope-related function
PAKCCMHM_01606 1.2e-25 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PAKCCMHM_01607 1.9e-121 thiN 2.7.6.2 H thiamine pyrophosphokinase
PAKCCMHM_01608 2.6e-120 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PAKCCMHM_01609 6.6e-162 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PAKCCMHM_01610 0.0 KLT serine threonine protein kinase
PAKCCMHM_01611 2.7e-140 stp 3.1.3.16 T phosphatase
PAKCCMHM_01612 1.1e-237 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PAKCCMHM_01613 1.5e-172 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PAKCCMHM_01614 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PAKCCMHM_01615 8.6e-31 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PAKCCMHM_01616 8.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PAKCCMHM_01617 1e-47
PAKCCMHM_01618 9.1e-290 recN L May be involved in recombinational repair of damaged DNA
PAKCCMHM_01619 5.1e-153 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PAKCCMHM_01620 8.6e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PAKCCMHM_01621 1.2e-33 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAKCCMHM_01622 7e-248 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAKCCMHM_01623 2.1e-149 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PAKCCMHM_01624 3.6e-67 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PAKCCMHM_01625 8.2e-73 yqhY S Asp23 family, cell envelope-related function
PAKCCMHM_01626 1.1e-101 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PAKCCMHM_01627 2.7e-197 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PAKCCMHM_01628 2.8e-48 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PAKCCMHM_01629 2e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
PAKCCMHM_01630 3.5e-58 arsC 1.20.4.1 P Belongs to the ArsC family
PAKCCMHM_01631 1.9e-150 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PAKCCMHM_01632 2.9e-214 S Uncharacterized protein conserved in bacteria (DUF2325)
PAKCCMHM_01633 1.8e-11
PAKCCMHM_01634 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PAKCCMHM_01635 1.9e-90 S ECF-type riboflavin transporter, S component
PAKCCMHM_01636 1.4e-142 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PAKCCMHM_01637 5.5e-80
PAKCCMHM_01638 1.2e-120 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
PAKCCMHM_01639 1.1e-306 S Predicted membrane protein (DUF2207)
PAKCCMHM_01640 8.3e-173 I Carboxylesterase family
PAKCCMHM_01641 1e-251 pepC 3.4.22.40 E Peptidase C1-like family
PAKCCMHM_01642 1.6e-61 pdxH S Pyridoxamine 5'-phosphate oxidase
PAKCCMHM_01643 7e-164 oppA E ABC transporter substrate-binding protein
PAKCCMHM_01644 9.9e-64 oppA E ABC transporter substrate-binding protein
PAKCCMHM_01645 1.9e-77 K MerR HTH family regulatory protein
PAKCCMHM_01646 8.9e-265 lmrB EGP Major facilitator Superfamily
PAKCCMHM_01647 2.6e-92 S Domain of unknown function (DUF4811)
PAKCCMHM_01648 1.1e-139 ppm1 GT2 M Glycosyl transferase family 2
PAKCCMHM_01649 8.7e-105 fic D Fic/DOC family
PAKCCMHM_01650 1.8e-69
PAKCCMHM_01651 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PAKCCMHM_01652 3.6e-272 V ABC transporter transmembrane region
PAKCCMHM_01654 9.4e-141 S haloacid dehalogenase-like hydrolase
PAKCCMHM_01655 0.0 pepN 3.4.11.2 E aminopeptidase
PAKCCMHM_01656 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PAKCCMHM_01657 6.6e-224 sptS 2.7.13.3 T Histidine kinase
PAKCCMHM_01658 1.2e-115 K response regulator
PAKCCMHM_01659 3.9e-113 2.7.6.5 T Region found in RelA / SpoT proteins
PAKCCMHM_01660 7.7e-47 ltrA S Bacterial low temperature requirement A protein (LtrA)
PAKCCMHM_01661 3.1e-81 ltrA S Bacterial low temperature requirement A protein (LtrA)
PAKCCMHM_01662 1.4e-66 O OsmC-like protein
PAKCCMHM_01663 5.8e-283 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PAKCCMHM_01664 7.5e-180 E ABC transporter, ATP-binding protein
PAKCCMHM_01665 2.1e-168 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PAKCCMHM_01666 6.7e-162 yihY S Belongs to the UPF0761 family
PAKCCMHM_01667 9.7e-160 map 3.4.11.18 E Methionine Aminopeptidase
PAKCCMHM_01668 2.5e-77 fld C Flavodoxin
PAKCCMHM_01669 2.7e-88 gtcA S Teichoic acid glycosylation protein
PAKCCMHM_01670 8e-213 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PAKCCMHM_01673 4.3e-250 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKCCMHM_01674 2.3e-202 yfmL 3.6.4.13 L DEAD DEAH box helicase
PAKCCMHM_01675 4.2e-135 M Glycosyl hydrolases family 25
PAKCCMHM_01676 4.4e-231 potE E amino acid
PAKCCMHM_01677 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PAKCCMHM_01678 1.4e-235 yhdP S Transporter associated domain
PAKCCMHM_01679 3.4e-106
PAKCCMHM_01680 4.5e-11
PAKCCMHM_01681 3.6e-117 C nitroreductase
PAKCCMHM_01682 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PAKCCMHM_01683 2.6e-138 glcR K DeoR C terminal sensor domain
PAKCCMHM_01684 7.2e-50 S Enterocin A Immunity
PAKCCMHM_01685 8.9e-133 gntR K UbiC transcription regulator-associated domain protein
PAKCCMHM_01686 7.7e-174 rihB 3.2.2.1 F Nucleoside
PAKCCMHM_01687 1.8e-127 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PAKCCMHM_01688 1.7e-157 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PAKCCMHM_01689 2.6e-85 dps P Belongs to the Dps family
PAKCCMHM_01690 2.3e-279 S C4-dicarboxylate anaerobic carrier
PAKCCMHM_01691 2.8e-60 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PAKCCMHM_01692 5.4e-108 phoU P Plays a role in the regulation of phosphate uptake
PAKCCMHM_01693 1e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAKCCMHM_01694 2.6e-146 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAKCCMHM_01695 1.6e-155 pstA P Phosphate transport system permease protein PstA
PAKCCMHM_01696 3.6e-161 pstC P probably responsible for the translocation of the substrate across the membrane
PAKCCMHM_01697 7.3e-158 pstS P Phosphate
PAKCCMHM_01698 4e-95 K Acetyltransferase (GNAT) domain
PAKCCMHM_01699 3e-128 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PAKCCMHM_01700 3.2e-254 glnPH2 P ABC transporter permease
PAKCCMHM_01701 2.5e-155 rssA S Phospholipase, patatin family
PAKCCMHM_01702 0.0 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
PAKCCMHM_01704 2e-52 S Enterocin A Immunity
PAKCCMHM_01705 8.7e-111 S CAAX protease self-immunity
PAKCCMHM_01706 4.8e-39 S CAAX protease self-immunity
PAKCCMHM_01708 8.1e-114 udk 2.7.1.48 F Cytidine monophosphokinase
PAKCCMHM_01711 2.7e-74 S Putative adhesin
PAKCCMHM_01712 4.6e-54 padR K Virulence activator alpha C-term
PAKCCMHM_01713 1.2e-88 padC Q Phenolic acid decarboxylase
PAKCCMHM_01715 4.4e-108 treB 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PAKCCMHM_01716 1.6e-26 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
PAKCCMHM_01717 2.8e-64
PAKCCMHM_01718 9.8e-107 glnP P ABC transporter permease
PAKCCMHM_01719 6e-109 gluC P ABC transporter permease
PAKCCMHM_01720 3.1e-150 glnH ET ABC transporter
PAKCCMHM_01721 4e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PAKCCMHM_01722 3.2e-147 glnH ET ABC transporter
PAKCCMHM_01723 0.0 V ABC transporter transmembrane region
PAKCCMHM_01724 3.3e-18 XK27_09600 V ABC transporter, ATP-binding protein
PAKCCMHM_01725 3e-67 K Transcriptional regulator, MarR family
PAKCCMHM_01726 2.3e-75 S Alpha beta hydrolase
PAKCCMHM_01727 1.1e-28 S Alpha beta hydrolase
PAKCCMHM_01728 9.9e-217 naiP EGP Major facilitator Superfamily
PAKCCMHM_01729 1e-37 pipD E Peptidase family C69
PAKCCMHM_01730 3e-38 pipD E Peptidase family C69
PAKCCMHM_01731 3.9e-44 pipD E Peptidase family C69
PAKCCMHM_01732 3.6e-282 dtpT U amino acid peptide transporter
PAKCCMHM_01733 3.3e-175 lacI3 K helix_turn _helix lactose operon repressor
PAKCCMHM_01734 7.3e-308 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
PAKCCMHM_01735 5.6e-66 2.7.1.191 G PTS system fructose IIA component
PAKCCMHM_01736 1.6e-149 G PTS system mannose/fructose/sorbose family IID component
PAKCCMHM_01737 1.8e-107 G PTS system sorbose-specific iic component
PAKCCMHM_01738 3e-84 2.7.1.191 G PTS system sorbose subfamily IIB component
PAKCCMHM_01739 3.1e-30 lacA 3.2.1.23 G -beta-galactosidase
PAKCCMHM_01740 1.8e-156 lacA 3.2.1.23 G -beta-galactosidase
PAKCCMHM_01741 4.4e-70 lacA 3.2.1.23 G -beta-galactosidase
PAKCCMHM_01742 1.6e-120 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
PAKCCMHM_01743 4.6e-46 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
PAKCCMHM_01744 4.6e-35 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
PAKCCMHM_01745 8.1e-129 ybbM S Uncharacterised protein family (UPF0014)
PAKCCMHM_01746 2.9e-111 ybbL S ABC transporter, ATP-binding protein
PAKCCMHM_01748 4.3e-208 pepA E M42 glutamyl aminopeptidase
PAKCCMHM_01749 3.9e-66
PAKCCMHM_01750 4.4e-41 K helix_turn_helix multiple antibiotic resistance protein
PAKCCMHM_01751 5.2e-10 K helix_turn_helix multiple antibiotic resistance protein
PAKCCMHM_01752 1.5e-33
PAKCCMHM_01753 8.2e-216 mdtG EGP Major facilitator Superfamily
PAKCCMHM_01754 6e-206 yagE E amino acid
PAKCCMHM_01756 1.2e-14 gadC E Contains amino acid permease domain
PAKCCMHM_01757 1.3e-241 gadC E Contains amino acid permease domain
PAKCCMHM_01758 7.9e-172 pepC 3.4.22.40 E Peptidase C1-like family
PAKCCMHM_01759 5.9e-44 pepC 3.4.22.40 E Peptidase C1-like family
PAKCCMHM_01760 3e-56 E Phospholipase B
PAKCCMHM_01761 3.8e-109 E Phospholipase B
PAKCCMHM_01762 2.8e-111 3.6.1.27 I Acid phosphatase homologues
PAKCCMHM_01763 2.9e-128 glsA 3.5.1.2 E Belongs to the glutaminase family
PAKCCMHM_01765 2e-274 lacG 3.2.1.85 G Belongs to the glycosyl hydrolase 1 family
PAKCCMHM_01766 3.8e-299 celB 2.7.1.196, 2.7.1.205, 2.7.1.207 G Phosphotransferase system, EIIC
PAKCCMHM_01767 1.1e-54 lacF 2.7.1.196, 2.7.1.205, 2.7.1.207 G PTS system, Lactose/Cellobiose specific IIA subunit
PAKCCMHM_01768 1.2e-122 lacT K CAT RNA binding domain
PAKCCMHM_01769 1.1e-37
PAKCCMHM_01770 2.5e-264 gatC G PTS system sugar-specific permease component
PAKCCMHM_01771 9.1e-50 2.7.1.200, 2.7.1.204 G PTS system, Lactose/Cellobiose specific IIB subunit
PAKCCMHM_01772 1.3e-82 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PAKCCMHM_01773 1.6e-120 S Domain of unknown function (DUF4867)
PAKCCMHM_01774 1.6e-105 rpiB 2.1.1.222, 2.1.1.64, 5.3.1.26, 5.3.1.6 G Ribose/Galactose Isomerase
PAKCCMHM_01775 5.1e-72 lacA 5.3.1.26 G Ribose/Galactose Isomerase
PAKCCMHM_01776 7.4e-130 lacR K DeoR C terminal sensor domain
PAKCCMHM_01777 1.6e-241 pyrP F Permease
PAKCCMHM_01780 1.3e-151 K Transcriptional regulator
PAKCCMHM_01781 1.2e-117 S hydrolase
PAKCCMHM_01782 3e-101 yagU S Protein of unknown function (DUF1440)
PAKCCMHM_01783 6.2e-140 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
PAKCCMHM_01784 3.8e-75 2.3.1.128 K acetyltransferase
PAKCCMHM_01785 5.7e-256 emrY EGP Major facilitator Superfamily
PAKCCMHM_01786 3e-252 emrY EGP Major facilitator Superfamily
PAKCCMHM_01787 1.8e-141 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PAKCCMHM_01788 4e-63 S CAAX amino terminal protease
PAKCCMHM_01789 2.2e-160 mleP3 S Membrane transport protein
PAKCCMHM_01790 9.4e-98 tag 3.2.2.20 L glycosylase
PAKCCMHM_01791 3.4e-191 S Bacteriocin helveticin-J
PAKCCMHM_01792 1.2e-92 yfeO P Voltage gated chloride channel
PAKCCMHM_01793 5.8e-104 yfeO P Voltage gated chloride channel
PAKCCMHM_01794 5.1e-78 yebR 1.8.4.14 T GAF domain-containing protein
PAKCCMHM_01795 3.1e-93 ylbE GM NAD(P)H-binding
PAKCCMHM_01796 7.7e-123 yfeJ 6.3.5.2 F Glutamine amidotransferase class-I
PAKCCMHM_01797 1.2e-91 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PAKCCMHM_01799 2.8e-49 K Sigma-54 interaction domain
PAKCCMHM_01800 3.2e-29 K Sigma-54 interaction domain
PAKCCMHM_01801 7.3e-12 K Sigma-54 interaction domain
PAKCCMHM_01802 7.4e-44
PAKCCMHM_01803 5e-173 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PAKCCMHM_01804 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PAKCCMHM_01805 7e-167 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PAKCCMHM_01806 5.3e-145 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PAKCCMHM_01807 1.1e-135
PAKCCMHM_01808 8.1e-131 MA20_36090 S Protein of unknown function (DUF2974)
PAKCCMHM_01809 2.5e-31 MA20_36090 S Protein of unknown function (DUF2974)
PAKCCMHM_01810 1.1e-298 ytgP S Polysaccharide biosynthesis protein
PAKCCMHM_01811 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PAKCCMHM_01812 2e-112 3.6.1.27 I Acid phosphatase homologues
PAKCCMHM_01813 2.7e-258 qacA EGP Major facilitator Superfamily
PAKCCMHM_01814 1.4e-216 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)