ORF_ID e_value Gene_name EC_number CAZy COGs Description
PBIEDHHO_00001 4.3e-250 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PBIEDHHO_00002 8e-205 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PBIEDHHO_00003 2.4e-33 yaaA S S4 domain
PBIEDHHO_00004 2.7e-205 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PBIEDHHO_00005 8.1e-38 yaaB S Domain of unknown function (DUF370)
PBIEDHHO_00006 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PBIEDHHO_00007 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PBIEDHHO_00008 2.2e-38 S COG NOG14552 non supervised orthologous group
PBIEDHHO_00011 1.5e-175 yaaC S YaaC-like Protein
PBIEDHHO_00012 1.8e-273 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PBIEDHHO_00013 1.2e-247 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PBIEDHHO_00014 2.2e-157 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
PBIEDHHO_00015 4.7e-108 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
PBIEDHHO_00016 1.1e-202 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PBIEDHHO_00017 2.3e-196 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PBIEDHHO_00018 1.3e-09
PBIEDHHO_00019 6.6e-119 dck 2.7.1.113, 2.7.1.74, 2.7.1.76 F Deoxycytidine kinase
PBIEDHHO_00020 1.6e-114 dgk 2.7.1.113, 2.7.1.74, 2.7.1.76 F Deoxyguanosine kinase
PBIEDHHO_00021 3.9e-208 yaaH M Glycoside Hydrolase Family
PBIEDHHO_00022 6.6e-96 yaaI Q COG1335 Amidases related to nicotinamidase
PBIEDHHO_00023 9.5e-83 tadA 3.5.4.1, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PBIEDHHO_00024 2.3e-311 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PBIEDHHO_00025 1e-35 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PBIEDHHO_00026 2.3e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PBIEDHHO_00027 3.6e-32 yaaL S Protein of unknown function (DUF2508)
PBIEDHHO_00028 4.8e-36 bofA S Sigma-K factor-processing regulatory protein BofA
PBIEDHHO_00029 2.2e-38 S COG NOG14552 non supervised orthologous group
PBIEDHHO_00032 4.2e-29 csfB S Inhibitor of sigma-G Gin
PBIEDHHO_00033 1.1e-99 xpaC S 5-bromo-4-chloroindolyl phosphate hydrolysis protein
PBIEDHHO_00034 2.6e-176 yaaN P Belongs to the TelA family
PBIEDHHO_00035 1.9e-256 adiA 4.1.1.17, 4.1.1.18, 4.1.1.19 E Orn Lys Arg decarboxylase
PBIEDHHO_00036 7.8e-109 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PBIEDHHO_00037 7.5e-55 yaaQ S protein conserved in bacteria
PBIEDHHO_00038 3.8e-70 yaaR S protein conserved in bacteria
PBIEDHHO_00039 8.5e-179 holB 2.7.7.7 L DNA polymerase III
PBIEDHHO_00040 1.1e-144 yaaT S stage 0 sporulation protein
PBIEDHHO_00041 5e-36 yabA L Involved in initiation control of chromosome replication
PBIEDHHO_00042 1.6e-137 yabB 2.1.1.223 S Conserved hypothetical protein 95
PBIEDHHO_00043 5.2e-47 yazA L endonuclease containing a URI domain
PBIEDHHO_00044 2.8e-157 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PBIEDHHO_00045 8.8e-44 abrB K COG2002 Regulators of stationary sporulation gene expression
PBIEDHHO_00046 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PBIEDHHO_00047 2.2e-142 tatD L hydrolase, TatD
PBIEDHHO_00048 4e-216 rpfB GH23 T protein conserved in bacteria
PBIEDHHO_00049 2.3e-96 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PBIEDHHO_00050 2.4e-156 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PBIEDHHO_00051 4.1e-124 yabG S peptidase
PBIEDHHO_00052 7.8e-39 veg S protein conserved in bacteria
PBIEDHHO_00053 2.9e-27 sspF S DNA topological change
PBIEDHHO_00054 7.8e-160 ispE 2.1.1.182, 2.7.1.148 I Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PBIEDHHO_00055 2.9e-151 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
PBIEDHHO_00056 5.1e-63 yabJ 3.5.99.10 J translation initiation inhibitor, yjgF family
PBIEDHHO_00057 1.8e-47 spoVG D Essential for sporulation. Interferes with or is a negative regulator of the pathway leading to asymmetric septation
PBIEDHHO_00058 1.7e-246 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PBIEDHHO_00059 2.7e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PBIEDHHO_00060 2.8e-103 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PBIEDHHO_00061 1.2e-105 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PBIEDHHO_00062 6.9e-39 yabK S Peptide ABC transporter permease
PBIEDHHO_00063 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PBIEDHHO_00064 2.6e-89 spoVT K stage V sporulation protein
PBIEDHHO_00065 5.8e-270 yabM S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PBIEDHHO_00066 7e-270 mazG 3.6.1.66, 3.6.1.9 S COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like
PBIEDHHO_00067 5.6e-37 yabO J COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
PBIEDHHO_00068 1.9e-49 yabP S Sporulation protein YabP
PBIEDHHO_00069 8.7e-100 yabQ S spore cortex biosynthesis protein
PBIEDHHO_00070 9.2e-57 divIC D Septum formation initiator
PBIEDHHO_00071 1.1e-57 yabR J RNA binding protein (contains ribosomal protein S1 domain)
PBIEDHHO_00074 0.0 spoIIE 3.1.3.16, 3.1.3.3 KT stage II sporulation protein E
PBIEDHHO_00075 1.2e-121 yabS S protein containing a von Willebrand factor type A (vWA) domain
PBIEDHHO_00076 9.2e-181 KLT serine threonine protein kinase
PBIEDHHO_00077 2.1e-263 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PBIEDHHO_00078 2.5e-92 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PBIEDHHO_00079 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PBIEDHHO_00080 5.5e-138 coaX 2.7.1.33 F Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PBIEDHHO_00081 1.2e-160 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PBIEDHHO_00082 2.6e-150 yacD 5.2.1.8 O peptidyl-prolyl isomerase
PBIEDHHO_00083 1.7e-168 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PBIEDHHO_00084 1.2e-263 pabB 2.6.1.85 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PBIEDHHO_00085 5.7e-106 pabA 2.6.1.85, 4.1.3.27 EH Anthranilate synthase
PBIEDHHO_00086 1.6e-149 pabC 2.6.1.42, 4.1.3.38 EH 4-amino-4-deoxychorismate lyase
PBIEDHHO_00087 9.1e-153 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PBIEDHHO_00088 2.6e-61 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PBIEDHHO_00089 3e-87 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
PBIEDHHO_00090 7.1e-28 yazB K transcriptional
PBIEDHHO_00091 1.6e-180 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PBIEDHHO_00092 1.6e-285 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PBIEDHHO_00093 2.2e-38 S COG NOG14552 non supervised orthologous group
PBIEDHHO_00094 7.5e-77 ctsR K Belongs to the CtsR family
PBIEDHHO_00095 1.1e-60 mcsA 2.7.14.1 S protein with conserved CXXC pairs
PBIEDHHO_00096 2.7e-202 mcsB 2.7.14.1, 2.7.3.2, 2.7.3.3 E Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity
PBIEDHHO_00097 0.0 clpC O Belongs to the ClpA ClpB family
PBIEDHHO_00098 3e-254 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PBIEDHHO_00099 4.2e-195 disA 2.7.7.85 L Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
PBIEDHHO_00100 5.2e-185 yacL S COG4956 Integral membrane protein (PIN domain superfamily)
PBIEDHHO_00101 1.8e-122 ispD 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PBIEDHHO_00102 3.5e-85 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 I Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PBIEDHHO_00103 4.2e-275 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PBIEDHHO_00104 1.6e-117 cysE 2.3.1.30 E Serine acetyltransferase
PBIEDHHO_00105 1.1e-267 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PBIEDHHO_00106 1.7e-70 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PBIEDHHO_00107 1.8e-133 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PBIEDHHO_00108 1.8e-87 yacP S RNA-binding protein containing a PIN domain
PBIEDHHO_00109 4.4e-115 sigH K Belongs to the sigma-70 factor family
PBIEDHHO_00110 7.8e-22 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PBIEDHHO_00111 1.4e-95 nusG K Participates in transcription elongation, termination and antitermination
PBIEDHHO_00112 2.8e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PBIEDHHO_00113 2.1e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PBIEDHHO_00114 1.9e-78 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PBIEDHHO_00115 1.3e-42 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PBIEDHHO_00116 4.8e-108 rsmC 2.1.1.172 J Methyltransferase
PBIEDHHO_00117 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PBIEDHHO_00118 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PBIEDHHO_00119 2.7e-33 ybxF J Belongs to the eukaryotic ribosomal protein eL8 family
PBIEDHHO_00120 6.5e-72 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PBIEDHHO_00121 7.9e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PBIEDHHO_00122 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PBIEDHHO_00123 1.8e-223 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PBIEDHHO_00124 2.6e-172 ybaC 3.4.11.5 S Alpha/beta hydrolase family
PBIEDHHO_00125 7.5e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PBIEDHHO_00126 6.3e-111 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PBIEDHHO_00127 2.3e-105 rplD J Forms part of the polypeptide exit tunnel
PBIEDHHO_00128 1.2e-43 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PBIEDHHO_00129 1.5e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PBIEDHHO_00130 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PBIEDHHO_00131 4.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PBIEDHHO_00132 8e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PBIEDHHO_00133 1.3e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PBIEDHHO_00134 1.7e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
PBIEDHHO_00135 1.8e-38 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PBIEDHHO_00136 8.7e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PBIEDHHO_00137 6.2e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PBIEDHHO_00138 3.9e-93 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PBIEDHHO_00139 3.4e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PBIEDHHO_00140 2.3e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PBIEDHHO_00141 1.5e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PBIEDHHO_00142 2.6e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PBIEDHHO_00143 2.4e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PBIEDHHO_00144 1.9e-23 rpmD J Ribosomal protein L30
PBIEDHHO_00145 4.1e-72 rplO J binds to the 23S rRNA
PBIEDHHO_00146 3.3e-231 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PBIEDHHO_00147 9.8e-123 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PBIEDHHO_00148 2.6e-140 map 3.4.11.18 E Methionine aminopeptidase
PBIEDHHO_00149 1.1e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PBIEDHHO_00150 4.2e-13 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PBIEDHHO_00151 4e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PBIEDHHO_00152 2.8e-64 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PBIEDHHO_00153 2.4e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PBIEDHHO_00154 4.7e-58 rplQ J Ribosomal protein L17
PBIEDHHO_00155 1.4e-153 cbiO P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PBIEDHHO_00156 1.2e-144 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PBIEDHHO_00157 1.9e-136 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PBIEDHHO_00158 5.9e-140 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PBIEDHHO_00159 7.1e-77 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PBIEDHHO_00160 1.6e-64 rpsI J Belongs to the universal ribosomal protein uS9 family
PBIEDHHO_00161 2.7e-140 ybaJ Q Methyltransferase domain
PBIEDHHO_00162 5.3e-15 ybaJ Q Methyltransferase domain
PBIEDHHO_00163 3.6e-76 ybaK S Protein of unknown function (DUF2521)
PBIEDHHO_00164 2.4e-130 cwlD 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
PBIEDHHO_00165 2.5e-192 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PBIEDHHO_00166 1.7e-75 gerD
PBIEDHHO_00167 1.7e-102 kbaA 2.7.8.43 S Involved in the activation of the KinB signaling pathway of sporulation
PBIEDHHO_00168 1.2e-127 pdaB 3.5.1.104 G Polysaccharide deacetylase
PBIEDHHO_00169 2.2e-38 S COG NOG14552 non supervised orthologous group
PBIEDHHO_00170 6.5e-213 glcP G Major Facilitator Superfamily
PBIEDHHO_00171 1e-245 dat 2.6.1.19 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PBIEDHHO_00172 2.2e-176 suhB 3.1.3.25, 3.1.3.7 G inositol monophosphate 1-phosphatase activity
PBIEDHHO_00173 2.9e-201 1.1.1.14, 1.1.1.303, 1.1.1.4 E alcohol dehydrogenase
PBIEDHHO_00174 1.1e-222 ybaR P COG0659 Sulfate permease and related transporters (MFS superfamily)
PBIEDHHO_00175 3.2e-170 ybaS 1.1.1.58 S Na -dependent transporter
PBIEDHHO_00176 2.2e-102 ybbA S Putative esterase
PBIEDHHO_00177 4.5e-175 feuC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PBIEDHHO_00178 6.9e-176 feuB P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PBIEDHHO_00179 2e-169 feuA P Iron-uptake system-binding protein
PBIEDHHO_00180 1.3e-290 ybbB K COG2207 AraC-type DNA-binding domain-containing proteins
PBIEDHHO_00181 7.8e-230 ybbC 3.2.1.52 S protein conserved in bacteria
PBIEDHHO_00182 0.0 ybbD 3.2.1.52 G Belongs to the glycosyl hydrolase 3 family
PBIEDHHO_00183 1.5e-236 yfeW 3.4.16.4 V Belongs to the UPF0214 family
PBIEDHHO_00184 1.9e-229 ybbF 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PBIEDHHO_00185 8.3e-160 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PBIEDHHO_00186 2.3e-81 ybbJ J acetyltransferase
PBIEDHHO_00187 1.2e-74 ybbK 2.4.2.1, 6.3.2.4 S Protein of unknown function (DUF523)
PBIEDHHO_00191 1.5e-07
PBIEDHHO_00193 1.4e-98 sigW K Belongs to the sigma-70 factor family. ECF subfamily
PBIEDHHO_00194 5.2e-113 rsiW K Is the anti-sigma factor for SigW. The presence of RsiW leads to the inactivation of SigW, and its proteolytic destruction to sigma-W activation
PBIEDHHO_00195 3.9e-145 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PBIEDHHO_00196 1.9e-216 ybbR S protein conserved in bacteria
PBIEDHHO_00197 2.3e-251 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PBIEDHHO_00198 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PBIEDHHO_00199 6.5e-47
PBIEDHHO_00200 2e-57 L replication factor c
PBIEDHHO_00201 1.4e-132 O growth
PBIEDHHO_00202 1.1e-52 S ABC-2 family transporter protein
PBIEDHHO_00203 6e-99 ybdN
PBIEDHHO_00204 2.9e-133 ybdO S Domain of unknown function (DUF4885)
PBIEDHHO_00205 4.9e-159 dkgB S Aldo/keto reductase family
PBIEDHHO_00206 1.5e-92 yxaC M effector of murein hydrolase
PBIEDHHO_00207 2.2e-50 S LrgA family
PBIEDHHO_00208 7.7e-68 yxaD K helix_turn_helix multiple antibiotic resistance protein
PBIEDHHO_00209 7.1e-256 yifK E COG1113 Gamma-aminobutyrate permease and related permeases
PBIEDHHO_00210 3.6e-94 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PBIEDHHO_00211 4.8e-178 T COG4585 Signal transduction histidine kinase
PBIEDHHO_00212 3e-100 KT LuxR family transcriptional regulator
PBIEDHHO_00213 6.4e-160 V COG1131 ABC-type multidrug transport system, ATPase component
PBIEDHHO_00214 8.4e-189 V COG0842 ABC-type multidrug transport system, permease component
PBIEDHHO_00215 1.8e-180 V ABC-2 family transporter protein
PBIEDHHO_00216 9.2e-23
PBIEDHHO_00217 1.5e-75 S Domain of unknown function (DUF4879)
PBIEDHHO_00218 1.3e-38 csgA S Sigma-G-dependent sporulation-specific SASP protein
PBIEDHHO_00219 3.6e-99 yqeB
PBIEDHHO_00220 2.3e-38 ybyB
PBIEDHHO_00221 1.2e-275 ybeC E amino acid
PBIEDHHO_00222 1.2e-15 S Protein of unknown function (DUF2651)
PBIEDHHO_00223 2e-163 glpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PBIEDHHO_00224 1.6e-257 glpT G -transporter
PBIEDHHO_00225 2.7e-17 S Protein of unknown function (DUF2651)
PBIEDHHO_00226 9.5e-211 hpaB 1.14.14.9 Q COG2368 Aromatic ring hydroxylase
PBIEDHHO_00228 3.9e-81 K Helix-turn-helix XRE-family like proteins
PBIEDHHO_00229 7e-187 gldA 1.1.1.1, 1.1.1.6 C COG0371 Glycerol dehydrogenase and related enzymes
PBIEDHHO_00230 1.7e-207 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PBIEDHHO_00231 1.9e-92 pssA 2.7.8.8 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PBIEDHHO_00232 5.1e-84 ybfM S SNARE associated Golgi protein
PBIEDHHO_00233 9e-150 psd 4.1.1.65 I Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)
PBIEDHHO_00234 2.8e-39 ybfN
PBIEDHHO_00235 2.6e-188 yceA S Belongs to the UPF0176 family
PBIEDHHO_00236 6.3e-211 gltP C Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PBIEDHHO_00237 2.3e-193 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PBIEDHHO_00238 7.2e-237 mmuP E amino acid
PBIEDHHO_00239 7.7e-177 mmuM 1.5.1.20, 2.1.1.10 H homocysteine
PBIEDHHO_00240 1.9e-251 agcS E Sodium alanine symporter
PBIEDHHO_00241 3.8e-153 glsA 3.5.1.2 E Belongs to the glutaminase family
PBIEDHHO_00242 5.7e-199 phoQ 2.7.13.3 T Histidine kinase
PBIEDHHO_00243 1.7e-155 glnL T Regulator
PBIEDHHO_00244 3.5e-126 ycbJ S Macrolide 2'-phosphotransferase
PBIEDHHO_00245 4.5e-24 rtpA K Tryptophan RNA-binding attenuator protein inhibitory protein
PBIEDHHO_00246 1.3e-154 fieF P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PBIEDHHO_00247 3.5e-91 ydfN C nitroreductase
PBIEDHHO_00248 6.8e-136 ydfO E COG0346 Lactoylglutathione lyase and related lyases
PBIEDHHO_00249 7.5e-62 mhqP S DoxX
PBIEDHHO_00250 3.5e-55 traF CO Thioredoxin
PBIEDHHO_00251 1.7e-11 L COG3666 Transposase and inactivated derivatives
PBIEDHHO_00252 1.4e-57 ycbP S Protein of unknown function (DUF2512)
PBIEDHHO_00253 4.8e-78 sleB 3.5.1.28 M Cell wall
PBIEDHHO_00254 0.0 phoD 3.1.3.1 P COG3540 Phosphodiesterase alkaline phosphatase D
PBIEDHHO_00255 4.4e-26 tatA U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
PBIEDHHO_00256 9e-123 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PBIEDHHO_00257 5.5e-118 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PBIEDHHO_00258 1.2e-189 ycbU E Selenocysteine lyase
PBIEDHHO_00259 1.7e-236 lmrB EGP the major facilitator superfamily
PBIEDHHO_00260 3.6e-97 yxaF K Transcriptional regulator
PBIEDHHO_00261 7.5e-46 lip 3.1.1.3 S acetyltransferases and hydrolases with the alpha beta hydrolase fold
PBIEDHHO_00262 6.4e-16 lip 3.1.1.3 S acetyltransferases and hydrolases with the alpha beta hydrolase fold
PBIEDHHO_00263 8e-191 yccF K DNA-templated transcriptional preinitiation complex assembly
PBIEDHHO_00264 1e-165 yccK C Aldo keto reductase
PBIEDHHO_00265 2.7e-164 ycdA S Domain of unknown function (DUF5105)
PBIEDHHO_00266 1.1e-235 ycdB K Belongs to the sigma-70 factor family. ECF subfamily
PBIEDHHO_00267 3e-251 ycdC K Belongs to the sigma-70 factor family. ECF subfamily
PBIEDHHO_00268 1.6e-88 cwlK M D-alanyl-D-alanine carboxypeptidase
PBIEDHHO_00269 2e-171 S response regulator aspartate phosphatase
PBIEDHHO_00270 2e-135 IQ Enoyl-(Acyl carrier protein) reductase
PBIEDHHO_00271 0.0 ycdG 3.2.1.10 GH13 G COG0366 Glycosidases
PBIEDHHO_00272 1.6e-48 S Domain of unknown function (DUF4188)
PBIEDHHO_00273 1.5e-47 padR K Virulence activator alpha C-term
PBIEDHHO_00274 1.1e-162 adcA P Belongs to the bacterial solute-binding protein 9 family
PBIEDHHO_00275 1.6e-131 adcC P 'COG1121 ABC-type Mn Zn transport systems, ATPase component'
PBIEDHHO_00276 2.2e-135 adcB P COG1108 ABC-type Mn2 Zn2 transport systems, permease components
PBIEDHHO_00277 1.4e-181 yceB C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PBIEDHHO_00278 6.2e-108 yceC 3.5.4.33 T proteins involved in stress response, homologs of TerZ and
PBIEDHHO_00279 6.3e-105 yceD T proteins involved in stress response, homologs of TerZ and
PBIEDHHO_00280 3.3e-106 yceE T proteins involved in stress response, homologs of TerZ and
PBIEDHHO_00281 1.7e-137 terC P Protein of unknown function (DUF475)
PBIEDHHO_00282 1.3e-306 yceG S Putative component of 'biosynthetic module'
PBIEDHHO_00283 4.3e-192 yceH P Belongs to the TelA family
PBIEDHHO_00284 1.4e-207 naiP P Uncharacterised MFS-type transporter YbfB
PBIEDHHO_00286 9e-226 proV 3.6.3.32 E glycine betaine
PBIEDHHO_00287 1.8e-137 opuAB P glycine betaine
PBIEDHHO_00288 4.2e-161 opuAC E glycine betaine
PBIEDHHO_00289 2.7e-205 amhX S amidohydrolase
PBIEDHHO_00290 1.1e-224 ycgA S Membrane
PBIEDHHO_00291 5.2e-42 ycgB
PBIEDHHO_00292 7.9e-13 S RDD family
PBIEDHHO_00293 1.7e-176 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PBIEDHHO_00294 9.9e-259 mdr EGP Major facilitator Superfamily
PBIEDHHO_00295 2.9e-73 emrR K helix_turn_helix multiple antibiotic resistance protein
PBIEDHHO_00296 6.1e-101 ycgF E Lysine exporter protein LysE YggA
PBIEDHHO_00297 1.6e-52 yqcI S YqcI/YcgG family
PBIEDHHO_00298 1.1e-80 yqcI S YqcI/YcgG family
PBIEDHHO_00299 4.5e-239 ycgH E COG1113 Gamma-aminobutyrate permease and related permeases
PBIEDHHO_00300 1.6e-22 ycgI S Domain of unknown function (DUF1989)
PBIEDHHO_00301 4.3e-76 ycgI S Domain of unknown function (DUF1989)
PBIEDHHO_00302 3.2e-147 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PBIEDHHO_00303 3.8e-129 4.2.1.118 G Xylose isomerase-like TIM barrel
PBIEDHHO_00304 4.1e-221 G COG0477 Permeases of the major facilitator superfamily
PBIEDHHO_00305 3.3e-103 aroK 2.7.1.71, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PBIEDHHO_00306 2.6e-180 cah 3.1.1.41 Q Acetyl xylan esterase (AXE1)
PBIEDHHO_00307 7.6e-138 ycgL S Predicted nucleotidyltransferase
PBIEDHHO_00308 6.2e-168 ycgM E Proline dehydrogenase
PBIEDHHO_00309 7.6e-291 rocA 1.2.1.88, 1.5.5.2 C Belongs to the aldehyde dehydrogenase family. RocA subfamily
PBIEDHHO_00310 3.2e-243 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PBIEDHHO_00311 3.7e-224 ycgP QT COG2508 Regulator of polyketide synthase expression
PBIEDHHO_00312 2.4e-184 ycgT 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
PBIEDHHO_00313 9e-262 cobA 2.1.1.107, 4.2.1.75 H Belongs to the precorrin methyltransferase family
PBIEDHHO_00314 1.5e-55 nirD 1.7.1.15 P Nitrite reductase
PBIEDHHO_00315 0.0 nirB 1.7.1.15 C Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
PBIEDHHO_00316 2.7e-39 nasA P COG2223 Nitrate nitrite transporter
PBIEDHHO_00317 3.4e-222 yciC S GTPases (G3E family)
PBIEDHHO_00318 4.1e-217 adhB 1.1.1.1, 1.1.1.14, 1.1.1.284 E COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
PBIEDHHO_00319 5.2e-72 yckC S membrane
PBIEDHHO_00320 3.5e-49 S Protein of unknown function (DUF2680)
PBIEDHHO_00321 2.3e-286 yckE 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PBIEDHHO_00322 4.3e-65 nin S Competence protein J (ComJ)
PBIEDHHO_00323 4.2e-77 nucA M Deoxyribonuclease NucA/NucB
PBIEDHHO_00324 1.3e-91 hxlB 4.1.2.43, 5.3.1.27 G SIS domain
PBIEDHHO_00325 1.2e-101 hxlA 4.1.2.43 G 3-hexulose-6-phosphate synthase
PBIEDHHO_00326 1.1e-62 hxlR K transcriptional
PBIEDHHO_00327 0.0 srfAA Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PBIEDHHO_00328 0.0 srfAB Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PBIEDHHO_00329 0.0 srfAC Q COG1020 Non-ribosomal peptide synthetase modules and related proteins
PBIEDHHO_00330 1.3e-136 srfAD Q thioesterase
PBIEDHHO_00331 4.3e-115 bamJ E Aminotransferase class I and II
PBIEDHHO_00332 5.1e-119 bamJ E Aminotransferase class I and II
PBIEDHHO_00333 2.5e-121 acpT 2.7.8.7 H Belongs to the P-Pant transferase superfamily
PBIEDHHO_00334 8e-106 yczE S membrane
PBIEDHHO_00335 1.3e-131 tcyC 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
PBIEDHHO_00336 1e-117 tcyB P COG0765 ABC-type amino acid transport system, permease component
PBIEDHHO_00337 1e-142 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PBIEDHHO_00338 1.4e-153 bsdA K LysR substrate binding domain
PBIEDHHO_00339 9.3e-101 ubiX 2.5.1.129 H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
PBIEDHHO_00340 1.5e-280 yclC 4.1.1.61 H Decarboxylase involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions. It is able to catalyze the reversible decarboxylation of 4-hydroxybenzoate
PBIEDHHO_00341 9.2e-36 bsdD 4.1.1.61 S response to toxic substance
PBIEDHHO_00342 6.6e-73 yclD
PBIEDHHO_00343 6.8e-265 dtpT E amino acid peptide transporter
PBIEDHHO_00344 1.5e-263 yclG M Pectate lyase superfamily protein
PBIEDHHO_00346 3.7e-280 gerKA EG Spore germination protein
PBIEDHHO_00347 5.5e-228 gerKC S spore germination
PBIEDHHO_00348 9.3e-190 gerKB F Spore germination protein
PBIEDHHO_00349 3e-248 yxeK C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PBIEDHHO_00350 2.2e-90 yxeL K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PBIEDHHO_00351 3.4e-138 yxeM M Belongs to the bacterial solute-binding protein 3 family
PBIEDHHO_00352 5.6e-57 yxeN P COG0765 ABC-type amino acid transport system, permease component
PBIEDHHO_00353 3e-44 yxeN P COG0765 ABC-type amino acid transport system, permease component
PBIEDHHO_00354 5.9e-132 yxeO 3.6.3.21 P ABC transporter, ATP-binding protein
PBIEDHHO_00355 1.6e-213 yxeP 3.5.1.47 E hydrolase activity
PBIEDHHO_00356 4.1e-240 yxeQ S MmgE/PrpD family
PBIEDHHO_00357 1.8e-119 yclH P ABC transporter
PBIEDHHO_00358 1.1e-222 yclI V ABC transporter (permease) YclI
PBIEDHHO_00359 9.9e-126 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PBIEDHHO_00360 9.5e-256 T PhoQ Sensor
PBIEDHHO_00361 2.7e-75 S aspartate phosphatase
PBIEDHHO_00364 6.5e-246 lysC 2.7.2.4 E Belongs to the aspartokinase family
PBIEDHHO_00365 6.3e-163 yclN P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PBIEDHHO_00366 2.3e-165 fatC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PBIEDHHO_00367 5.8e-135 yclP 3.6.3.34 P ABC transporter, ATP-binding protein
PBIEDHHO_00368 2.8e-171 yclQ P COG4607 ABC-type enterochelin transport system, periplasmic component
PBIEDHHO_00369 8.1e-247 ycnB EGP Major facilitator Superfamily
PBIEDHHO_00370 1.1e-148 ycnC K Transcriptional regulator
PBIEDHHO_00371 1.4e-133 nfrA2 1.5.1.38, 1.5.1.39 C Nitroreductase family
PBIEDHHO_00372 1.4e-44 ycnE S Monooxygenase
PBIEDHHO_00373 1.8e-50 yczG K helix_turn_helix, Arsenical Resistance Operon Repressor
PBIEDHHO_00374 2.7e-255 gabR K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PBIEDHHO_00375 5.5e-210 gabT 2.6.1.19, 2.6.1.22 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PBIEDHHO_00376 1.3e-262 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PBIEDHHO_00377 2.6e-147 glcU U Glucose uptake
PBIEDHHO_00378 8.6e-142 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PBIEDHHO_00379 6.2e-95 ycnI S protein conserved in bacteria
PBIEDHHO_00380 1.8e-287 ycnJ P protein, homolog of Cu resistance protein CopC
PBIEDHHO_00381 5.8e-103 ycnK K COG1349 Transcriptional regulators of sugar metabolism
PBIEDHHO_00382 3.9e-54
PBIEDHHO_00383 2.8e-231 mtlA 2.7.1.197 G COG2213 Phosphotransferase system, mannitol-specific IIBC component
PBIEDHHO_00384 2e-71 mtlF 2.7.1.197 G COG4668 Mannitol fructose-specific phosphotransferase system, IIA domain
PBIEDHHO_00385 9.6e-203 mtlD 1.1.1.17 G COG0246 Mannitol-1-phosphate altronate dehydrogenases
PBIEDHHO_00386 2.7e-59 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
PBIEDHHO_00388 2.6e-135 ycsE 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
PBIEDHHO_00389 2.1e-132 ycsF S Belongs to the UPF0271 (lamB) family
PBIEDHHO_00390 1.8e-207 ycsG P COG1914 Mn2 and Fe2 transporters of the NRAMP family
PBIEDHHO_00391 1.1e-141 ycsI S Belongs to the D-glutamate cyclase family
PBIEDHHO_00392 1.7e-131 kipI 3.5.1.54 E Allophanate hydrolase subunit 1
PBIEDHHO_00393 9.7e-178 kipA 6.3.4.6 E Allophanate hydrolase subunit 2
PBIEDHHO_00394 4.3e-125 kipR K Transcriptional regulator
PBIEDHHO_00395 1.2e-112 ycsK E anatomical structure formation involved in morphogenesis
PBIEDHHO_00397 1.1e-53 yczJ S biosynthesis
PBIEDHHO_00398 0.0 pbpC 3.4.16.4 M Penicillin-binding Protein
PBIEDHHO_00399 6.8e-167 ydhF S Oxidoreductase
PBIEDHHO_00400 0.0 mtlR K transcriptional regulator, MtlR
PBIEDHHO_00401 7.4e-283 ydaB IQ acyl-CoA ligase
PBIEDHHO_00402 2.3e-142 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PBIEDHHO_00403 9.6e-94 MA20_27600 5.3.1.15 S Cupin 2, conserved barrel domain protein
PBIEDHHO_00404 3e-113 rimL 1.1.1.25 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PBIEDHHO_00405 3.4e-76 ydaG 1.4.3.5 S general stress protein
PBIEDHHO_00406 1.2e-135 amj U Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane
PBIEDHHO_00407 1.5e-46 ydzA EGP Major facilitator Superfamily
PBIEDHHO_00408 4.3e-74 lrpC K Transcriptional regulator
PBIEDHHO_00409 0.0 topB 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PBIEDHHO_00410 2.9e-188 ydaJ M Belongs to the glycosyl hydrolase 8 (cellulase D) family
PBIEDHHO_00411 6.5e-143 ydaK T Diguanylate cyclase, GGDEF domain
PBIEDHHO_00412 0.0 ydaL S Uncharacterized protein conserved in bacteria (DUF2334)
PBIEDHHO_00413 2.6e-228 ydaM M Glycosyl transferase family group 2
PBIEDHHO_00414 0.0 ydaN S Bacterial cellulose synthase subunit
PBIEDHHO_00415 0.0 ydaO E amino acid
PBIEDHHO_00416 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PBIEDHHO_00417 7.1e-61 K acetyltransferase
PBIEDHHO_00418 2.8e-87 yycO S Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
PBIEDHHO_00419 4.8e-69
PBIEDHHO_00420 2e-183 S Histidine kinase
PBIEDHHO_00423 4.7e-39
PBIEDHHO_00424 1.9e-223 mntH P H( )-stimulated, divalent metal cation uptake system
PBIEDHHO_00426 1.1e-33 ydaT
PBIEDHHO_00427 5.8e-73 yvaD S Family of unknown function (DUF5360)
PBIEDHHO_00428 1.5e-51 yvaE P Small Multidrug Resistance protein
PBIEDHHO_00429 2.9e-135 ydbA 3.6.3.4, 3.6.3.54 P EcsC protein family
PBIEDHHO_00431 4.6e-55 ydbB G Cupin domain
PBIEDHHO_00432 1.8e-57 ydbC S Domain of unknown function (DUF4937
PBIEDHHO_00433 2.3e-153 ydbD P Catalase
PBIEDHHO_00434 3.1e-195 dctB G COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component
PBIEDHHO_00435 2.9e-293 dctS 2.7.13.3 T Signal transduction histidine kinase regulating citrate malate metabolism
PBIEDHHO_00436 2.9e-114 dctR T COG4565 Response regulator of citrate malate metabolism
PBIEDHHO_00437 3.2e-223 dctA U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PBIEDHHO_00438 3.7e-156 ydbI S AI-2E family transporter
PBIEDHHO_00439 1.4e-167 ydbJ V ABC transporter, ATP-binding protein
PBIEDHHO_00440 1.5e-127 ydbK S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PBIEDHHO_00441 4.6e-52 ydbL
PBIEDHHO_00442 4e-70 ydbM 1.3.8.1 I acyl-CoA dehydrogenase
PBIEDHHO_00443 2.4e-113 ydbM 1.3.8.1 I acyl-CoA dehydrogenase
PBIEDHHO_00444 3.5e-12 S Fur-regulated basic protein B
PBIEDHHO_00445 9.2e-10 S Fur-regulated basic protein A
PBIEDHHO_00446 2.4e-119 yeaB P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PBIEDHHO_00447 8.5e-56 ydbP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PBIEDHHO_00448 1.3e-201 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PBIEDHHO_00449 8.9e-251 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PBIEDHHO_00450 1.8e-249 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PBIEDHHO_00451 4.6e-61 ydbS S Bacterial PH domain
PBIEDHHO_00452 6.6e-252 ydbT S Membrane
PBIEDHHO_00453 5.8e-106 ydcA 3.4.21.105 S membrane protein (homolog of Drosophila rhomboid)
PBIEDHHO_00454 4.1e-54 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PBIEDHHO_00455 1.3e-179 ydcC M COG2834 Outer membrane lipoprotein-sorting protein
PBIEDHHO_00456 3.9e-215 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PBIEDHHO_00457 8.1e-42 ndoAI K transcriptional regulators containing the CopG Arc MetJ DNA-binding domain and a metal-binding domain
PBIEDHHO_00458 2.5e-56 ndoA L Toxic component of a toxin-antitoxin (TA) module
PBIEDHHO_00459 3e-137 rsbR T Positive regulator of sigma-B
PBIEDHHO_00460 1.8e-57 rsbS T antagonist
PBIEDHHO_00461 4.2e-68 rsbT 2.7.11.1 T COG2172 Anti-sigma regulatory factor (Ser Thr protein kinase)
PBIEDHHO_00462 1.8e-184 rsbU 3.1.3.3 KT phosphatase
PBIEDHHO_00463 2.7e-52 rsbV T Belongs to the anti-sigma-factor antagonist family
PBIEDHHO_00464 6.6e-84 rsbW 2.7.11.1 F Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B)
PBIEDHHO_00465 2e-138 sigB K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PBIEDHHO_00466 2.2e-105 rsbX 3.1.3.16, 3.1.3.3 KT Sigma factor PP2C-like phosphatases
PBIEDHHO_00467 0.0 yhgF K COG2183 Transcriptional accessory protein
PBIEDHHO_00468 1.7e-14
PBIEDHHO_00469 4.6e-80 ydcK S Belongs to the SprT family
PBIEDHHO_00477 3.7e-139 I esterase
PBIEDHHO_00478 1.5e-47 ohrB O OsmC-like protein
PBIEDHHO_00479 2.8e-49 ohrR K Transcriptional regulator
PBIEDHHO_00480 2.8e-13 S Domain of unknown function (DUF4367)
PBIEDHHO_00481 3.8e-54
PBIEDHHO_00482 8.2e-77 K Transcriptional regulator
PBIEDHHO_00483 2.3e-95 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PBIEDHHO_00484 5.1e-30 cspL K Cold shock
PBIEDHHO_00485 8.9e-111 racX 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PBIEDHHO_00486 3.1e-101 S Protein of unknown function (DUF2812)
PBIEDHHO_00487 1.6e-49 K Transcriptional regulator PadR-like family
PBIEDHHO_00488 1.6e-236 K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PBIEDHHO_00489 1.2e-188 ydeG EGP Major facilitator superfamily
PBIEDHHO_00490 7.5e-172 S Patatin-like phospholipase
PBIEDHHO_00492 1.7e-254 ygaK C COG0277 FAD FMN-containing dehydrogenases
PBIEDHHO_00493 6.3e-70 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PBIEDHHO_00494 2.9e-152 czcD P COG1230 Co Zn Cd efflux system component
PBIEDHHO_00495 1.4e-160 S SNARE associated Golgi protein
PBIEDHHO_00496 5.8e-97 yrkC G Cupin domain
PBIEDHHO_00497 1.8e-82 yyaR K Acetyltransferase (GNAT) domain
PBIEDHHO_00498 6.6e-146 ydeE K AraC family transcriptional regulator
PBIEDHHO_00500 2.6e-186 rlmN 2.1.1.192, 2.1.1.224 J Specifically methylates position 8 of adenine 2503 in 23S rRNA. Confers resistance to some classes of antibiotics
PBIEDHHO_00501 7.1e-47 ydeH
PBIEDHHO_00502 1.3e-160 S Sodium Bile acid symporter family
PBIEDHHO_00503 5.1e-198 adhA 1.1.1.1 C alcohol dehydrogenase
PBIEDHHO_00504 5e-61 yraB K helix_turn_helix, mercury resistance
PBIEDHHO_00505 1.4e-218 mleN_2 C antiporter
PBIEDHHO_00506 1.7e-246 K helix_turn_helix gluconate operon transcriptional repressor
PBIEDHHO_00507 2.6e-101 paiB K Transcriptional regulator
PBIEDHHO_00508 6.9e-167 ydeR EGP Major facilitator Superfamily
PBIEDHHO_00509 1.5e-98 ydeS K Transcriptional regulator
PBIEDHHO_00510 5.7e-150 ydeK EG -transporter
PBIEDHHO_00511 9e-251 ydeL K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PBIEDHHO_00512 2.6e-46 yraD M Spore coat protein
PBIEDHHO_00513 3.1e-24 yraE
PBIEDHHO_00514 9.7e-219 adhB 1.1.1.1, 1.1.1.14, 1.1.1.284 E COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
PBIEDHHO_00515 8.4e-63 yraF M Spore coat protein
PBIEDHHO_00516 8.4e-35 yraG
PBIEDHHO_00517 2.3e-35 ydfJ S drug exporters of the RND superfamily
PBIEDHHO_00518 1.2e-126 puuD S Peptidase C26
PBIEDHHO_00519 2.6e-289 expZ S ABC transporter
PBIEDHHO_00520 3.6e-91 ynaD J Acetyltransferase (GNAT) domain
PBIEDHHO_00521 2.3e-148 S Uncharacterized protein conserved in bacteria (DUF2179)
PBIEDHHO_00522 2.5e-195 gldA 1.1.1.6 C COG0371 Glycerol dehydrogenase and related enzymes
PBIEDHHO_00523 2e-206 tcaB EGP Major facilitator Superfamily
PBIEDHHO_00524 5.2e-218 fabF_1 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PBIEDHHO_00525 6.2e-154 K Helix-turn-helix XRE-family like proteins
PBIEDHHO_00526 1.1e-122 ydhB S membrane transporter protein
PBIEDHHO_00527 2e-77 bltD 2.3.1.57 K FR47-like protein
PBIEDHHO_00528 2.6e-141 bltR K helix_turn_helix, mercury resistance
PBIEDHHO_00529 2.2e-15 ydzE EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PBIEDHHO_00530 1.8e-117 ydzE EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PBIEDHHO_00531 9.3e-107 yjhB 3.6.1.13, 3.6.1.55 F ADP-ribose pyrophosphatase
PBIEDHHO_00532 7.5e-105 S Alpha/beta hydrolase family
PBIEDHHO_00533 5.7e-165 ycsA 1.1.1.83, 1.1.1.93, 4.1.1.73 CE Tartrate dehydrogenase
PBIEDHHO_00534 1.3e-112 ydhC K FCD
PBIEDHHO_00535 3.9e-218 ydhE CG COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
PBIEDHHO_00537 2.5e-245 pbpE V Beta-lactamase
PBIEDHHO_00539 1.2e-97 ydhK M Protein of unknown function (DUF1541)
PBIEDHHO_00540 7.1e-193 pbuE EGP Major facilitator Superfamily
PBIEDHHO_00541 3.1e-130 ydhQ K UTRA
PBIEDHHO_00542 2.1e-112 K FCD
PBIEDHHO_00543 8.2e-208 yeaN P COG2807 Cyanate permease
PBIEDHHO_00544 1.1e-47 sugE P Small Multidrug Resistance protein
PBIEDHHO_00545 3.1e-48 ykkC P Small Multidrug Resistance protein
PBIEDHHO_00546 2e-98 yvdT K Transcriptional regulator
PBIEDHHO_00547 8.2e-293 yveA E amino acid
PBIEDHHO_00548 1.4e-161 ydhU P Catalase
PBIEDHHO_00549 1.7e-81 yndB S Activator of Hsp90 ATPase homolog 1-like protein
PBIEDHHO_00550 1.6e-177 yhfP 1.1.1.1 C Quinone oxidoreductase
PBIEDHHO_00551 4e-246 iolT EGP Major facilitator Superfamily
PBIEDHHO_00554 2.2e-38 S COG NOG14552 non supervised orthologous group
PBIEDHHO_00555 7.8e-08
PBIEDHHO_00557 4.1e-173 thiL 2.7.4.16 H Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
PBIEDHHO_00558 3.2e-83 ydiB 2.7.1.221, 5.1.1.1 S ATPase or kinase
PBIEDHHO_00559 5.1e-122 yeaZ 2.3.1.234 O COG1214 Inactive homolog of metal-dependent proteases
PBIEDHHO_00560 9e-83 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PBIEDHHO_00561 8.9e-187 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PBIEDHHO_00562 4e-310 ydiF S ABC transporter
PBIEDHHO_00563 1.2e-88 moaC 4.6.1.17 H Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
PBIEDHHO_00564 4.4e-115 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PBIEDHHO_00565 1.7e-18 tatA U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
PBIEDHHO_00566 1.2e-121 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PBIEDHHO_00567 1.7e-27 ydiK S Domain of unknown function (DUF4305)
PBIEDHHO_00568 5.3e-125 ydiL S CAAX protease self-immunity
PBIEDHHO_00569 6.3e-42 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PBIEDHHO_00570 2.2e-280 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PBIEDHHO_00571 2.3e-77 S Phage integrase family
PBIEDHHO_00572 2.1e-20 yqaB E IrrE N-terminal-like domain
PBIEDHHO_00573 1.7e-25 S Protein of unknown function (DUF4064)
PBIEDHHO_00574 1.3e-48
PBIEDHHO_00575 3.2e-17 K sequence-specific DNA binding
PBIEDHHO_00576 1.9e-18 K Helix-turn-helix XRE-family like proteins
PBIEDHHO_00578 6.2e-22
PBIEDHHO_00579 1.5e-31
PBIEDHHO_00580 4.3e-61 S DNA binding
PBIEDHHO_00581 4.2e-85
PBIEDHHO_00583 1.2e-07 S Hypothetical protein Yqai
PBIEDHHO_00585 5.9e-153 yqaJ L YqaJ-like viral recombinase domain
PBIEDHHO_00586 2.9e-127 recT L RecT family
PBIEDHHO_00587 4e-29 3.1.3.16 L DnaD domain protein
PBIEDHHO_00588 6.2e-133 xkdC L IstB-like ATP binding protein
PBIEDHHO_00590 1.8e-11 S YopX protein
PBIEDHHO_00591 3e-54 S Protein of unknown function (DUF1064)
PBIEDHHO_00593 5e-17 yqaO S Phage-like element PBSX protein XtrA
PBIEDHHO_00596 2.7e-167 dcm 2.1.1.37 L Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
PBIEDHHO_00598 2.2e-62 S dUTPase
PBIEDHHO_00599 5.9e-07 S YopX protein
PBIEDHHO_00600 2.2e-10 FG Mazg nucleotide pyrophosphohydrolase
PBIEDHHO_00602 5.8e-47
PBIEDHHO_00604 1.2e-67 xpf K COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
PBIEDHHO_00606 3.9e-12 K Transcriptional regulator
PBIEDHHO_00608 2.1e-81 yqaS L DNA packaging
PBIEDHHO_00609 6.4e-179 S Pfam:Terminase_3C
PBIEDHHO_00610 1.1e-126 S Phage portal protein, SPP1 Gp6-like
PBIEDHHO_00611 1.5e-92 S Phage Mu protein F like protein
PBIEDHHO_00613 5.4e-44 S Phage minor structural protein GP20
PBIEDHHO_00614 2.9e-54 gpG
PBIEDHHO_00617 3.5e-27 S Phage gp6-like head-tail connector protein
PBIEDHHO_00618 9.5e-29 S Phage head-tail joining protein
PBIEDHHO_00619 6.2e-38 S Bacteriophage HK97-gp10, putative tail-component
PBIEDHHO_00620 3.8e-29 S Protein of unknown function (DUF3168)
PBIEDHHO_00621 1.3e-34 S Phage tail tube protein
PBIEDHHO_00622 1.9e-25 S Phage tail assembly chaperone protein, TAC
PBIEDHHO_00623 9.3e-136
PBIEDHHO_00624 3.5e-47
PBIEDHHO_00625 1.1e-200 sidC L Phage minor structural protein
PBIEDHHO_00629 2.2e-59 S Pfam:Phage_holin_4_1
PBIEDHHO_00630 8.2e-72 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
PBIEDHHO_00631 7.7e-16
PBIEDHHO_00632 6.1e-40
PBIEDHHO_00633 7e-52 V Abortive infection bacteriophage resistance protein
PBIEDHHO_00634 1.8e-16
PBIEDHHO_00635 0.0 ybfG 3.2.1.132 M Putative peptidoglycan binding domain
PBIEDHHO_00637 5.7e-62
PBIEDHHO_00638 0.0 K NB-ARC domain
PBIEDHHO_00639 1.5e-197 gutB 1.1.1.14 E Dehydrogenase
PBIEDHHO_00640 9.9e-228 gutA G MFS/sugar transport protein
PBIEDHHO_00641 1.6e-169 ydjE 2.7.1.4 G pfkB family carbohydrate kinase
PBIEDHHO_00642 1.1e-29 yjdJ S Domain of unknown function (DUF4306)
PBIEDHHO_00643 3.1e-111 pspA KT Phage shock protein A
PBIEDHHO_00644 1.7e-174 ydjG 3.6.4.12 L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PBIEDHHO_00645 1.1e-114 ydjH S COG1512 Beta-propeller domains of methanol dehydrogenase type
PBIEDHHO_00646 1.2e-143 ydjI S virion core protein (lumpy skin disease virus)
PBIEDHHO_00647 0.0 yrhL I Acyltransferase family
PBIEDHHO_00648 2.6e-139 rsiV S Protein of unknown function (DUF3298)
PBIEDHHO_00649 9.5e-86 sigV K Belongs to the sigma-70 factor family. ECF subfamily
PBIEDHHO_00650 6.4e-193 bdhA 1.1.1.303, 1.1.1.4 E Dehydrogenase
PBIEDHHO_00651 4.2e-62 ydjM M Lytic transglycolase
PBIEDHHO_00652 1.8e-131 ydjN U Involved in the tonB-independent uptake of proteins
PBIEDHHO_00654 3.2e-34 ydjO S Cold-inducible protein YdjO
PBIEDHHO_00655 9.5e-302 cotA 1.10.3.4, 1.16.3.3 Q multicopper oxidases
PBIEDHHO_00656 3.9e-238 gabP E COG1113 Gamma-aminobutyrate permease and related permeases
PBIEDHHO_00657 2.5e-150 yeaB P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PBIEDHHO_00658 3e-176 yeaC S COG0714 MoxR-like ATPases
PBIEDHHO_00659 1.2e-198 yeaD S conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
PBIEDHHO_00660 0.0 yebA E COG1305 Transglutaminase-like enzymes
PBIEDHHO_00661 6.2e-301 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PBIEDHHO_00662 5.2e-90 sigV K Belongs to the sigma-70 factor family. ECF subfamily
PBIEDHHO_00663 8.2e-247 S Domain of unknown function (DUF4179)
PBIEDHHO_00664 4e-208 pbuG S permease
PBIEDHHO_00665 2.6e-122 yebC M Membrane
PBIEDHHO_00667 8.9e-93 yebE S UPF0316 protein
PBIEDHHO_00668 2.1e-28 yebG S NETI protein
PBIEDHHO_00669 2.2e-82 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PBIEDHHO_00670 5.3e-220 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PBIEDHHO_00671 1.8e-245 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PBIEDHHO_00672 8e-126 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PBIEDHHO_00673 2.4e-37 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PBIEDHHO_00674 1.5e-126 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PBIEDHHO_00675 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PBIEDHHO_00676 9.8e-269 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PBIEDHHO_00677 2.5e-181 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PBIEDHHO_00678 8.5e-102 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PBIEDHHO_00679 2.8e-285 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PBIEDHHO_00680 2.1e-230 purD 6.3.4.13 F Belongs to the GARS family
PBIEDHHO_00681 3.8e-62 K helix_turn_helix ASNC type
PBIEDHHO_00682 4.2e-135 yjeH E Amino acid permease
PBIEDHHO_00683 5.4e-25 S Protein of unknown function (DUF2892)
PBIEDHHO_00684 0.0 yerA 3.5.4.2 F adenine deaminase
PBIEDHHO_00685 2.4e-189 yerB S Protein of unknown function (DUF3048) C-terminal domain
PBIEDHHO_00686 2.4e-50 yerC S protein conserved in bacteria
PBIEDHHO_00687 6.1e-296 yerD 1.4.7.1 E Belongs to the glutamate synthase family
PBIEDHHO_00688 9e-127 pcrB I 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
PBIEDHHO_00689 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PBIEDHHO_00690 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PBIEDHHO_00691 5.2e-223 camS S COG4851 Protein involved in sex pheromone biosynthesis
PBIEDHHO_00692 5.4e-181 yerI S homoserine kinase type II (protein kinase fold)
PBIEDHHO_00693 3.1e-119 sapB S MgtC SapB transporter
PBIEDHHO_00694 4.9e-263 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PBIEDHHO_00695 1.6e-45 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PBIEDHHO_00696 2e-272 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PBIEDHHO_00697 1.5e-269 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PBIEDHHO_00698 1.1e-147 yerO K Transcriptional regulator
PBIEDHHO_00699 0.0 swrC V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PBIEDHHO_00700 7.4e-169 yegS 2.7.1.107 I COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
PBIEDHHO_00701 1.6e-247 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PBIEDHHO_00702 5.4e-310 L Uncharacterized conserved protein (DUF2075)
PBIEDHHO_00703 8.5e-160 cylA V AAA domain, putative AbiEii toxin, Type IV TA system
PBIEDHHO_00704 1.4e-137 cylB V ABC-2 type transporter
PBIEDHHO_00705 2e-38 S Protein of unknown function, DUF600
PBIEDHHO_00706 1.5e-56 S Protein of unknown function, DUF600
PBIEDHHO_00707 1.9e-51 S Protein of unknown function, DUF600
PBIEDHHO_00708 7.8e-198 yobL L nucleic acid phosphodiester bond hydrolysis
PBIEDHHO_00709 1.3e-120 yobL L Belongs to the WXG100 family
PBIEDHHO_00710 1.2e-126 yeeN K transcriptional regulatory protein
PBIEDHHO_00712 1.7e-109 aadK G Streptomycin adenylyltransferase
PBIEDHHO_00713 9.1e-45 cotJA S Spore coat associated protein JA (CotJA)
PBIEDHHO_00714 1.3e-44 cotJB S CotJB protein
PBIEDHHO_00715 2e-103 cotJC P Spore Coat
PBIEDHHO_00716 2.2e-88 yesJ K Acetyltransferase (GNAT) family
PBIEDHHO_00718 3e-114 yetF S membrane
PBIEDHHO_00719 7e-53 isdI 1.14.99.48, 1.14.99.57 S Antibiotic biosynthesis monooxygenase
PBIEDHHO_00720 7e-62 yetH E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PBIEDHHO_00721 3.6e-80 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PBIEDHHO_00722 1.5e-53 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PBIEDHHO_00723 1.4e-20 yezD S Uncharacterized small protein (DUF2292)
PBIEDHHO_00724 2.4e-55 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase activity
PBIEDHHO_00725 2e-104 yetJ S Belongs to the BI1 family
PBIEDHHO_00726 4.9e-85 yetL K helix_turn_helix multiple antibiotic resistance protein
PBIEDHHO_00727 8.1e-194 yetM CH FAD binding domain
PBIEDHHO_00728 6.1e-88 yetN S Protein of unknown function (DUF3900)
PBIEDHHO_00729 1.2e-92 yetN S Protein of unknown function (DUF3900)
PBIEDHHO_00730 0.0 cypD 1.14.14.1, 1.6.2.4 C Belongs to the cytochrome P450 family
PBIEDHHO_00732 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
PBIEDHHO_00733 4.3e-146 rfbF 2.7.7.33 JM Nucleotidyl transferase
PBIEDHHO_00734 9.2e-172 yfnG 4.2.1.45 M dehydratase
PBIEDHHO_00735 8.4e-173 yfnF M Nucleotide-diphospho-sugar transferase
PBIEDHHO_00736 4.3e-214 yfnE 2.4.1.338 GT2 S Glycosyltransferase like family 2
PBIEDHHO_00737 4.5e-177 yfnD M Nucleotide-diphospho-sugar transferase
PBIEDHHO_00738 1e-213 fsr P COG0477 Permeases of the major facilitator superfamily
PBIEDHHO_00739 7.6e-242 yfnA E amino acid
PBIEDHHO_00740 3.2e-275 yfmT 1.2.1.3, 1.2.1.67 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PBIEDHHO_00741 1.1e-105 yfmS NT chemotaxis protein
PBIEDHHO_00742 6.4e-165 IQ Enoyl-(Acyl carrier protein) reductase
PBIEDHHO_00743 6.5e-201 M COG0463 Glycosyltransferases involved in cell wall biogenesis
PBIEDHHO_00744 0.0 yfmR S COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PBIEDHHO_00745 5.8e-68 yfmP K transcriptional
PBIEDHHO_00746 3.2e-196 yfmO EGP Major facilitator Superfamily
PBIEDHHO_00747 4.6e-296 yfmM S COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PBIEDHHO_00748 1.8e-201 yfmL 3.6.4.13 L COG0513 Superfamily II DNA and RNA helicases
PBIEDHHO_00749 1.9e-181 yfmJ S N-terminal domain of oxidoreductase
PBIEDHHO_00750 3.9e-25 S Protein of unknown function (DUF3212)
PBIEDHHO_00751 1.3e-57 yflT S Heat induced stress protein YflT
PBIEDHHO_00752 3.1e-234 pel 4.2.2.10, 4.2.2.2 G Pectate lyase
PBIEDHHO_00753 1e-233 yflS P Sodium:sulfate symporter transmembrane region
PBIEDHHO_00754 3.7e-26 Q PFAM Collagen triple helix
PBIEDHHO_00756 1.2e-19 Q calcium- and calmodulin-responsive adenylate cyclase activity
PBIEDHHO_00757 5.2e-76 M1-820 Q Collagen triple helix repeat (20 copies)
PBIEDHHO_00758 0.0 ywpD T PhoQ Sensor
PBIEDHHO_00759 4.8e-151 M1-574 T Transcriptional regulatory protein, C terminal
PBIEDHHO_00760 0.0 M1-568 M cell wall anchor domain
PBIEDHHO_00761 4.6e-80 srtA 3.4.22.70 M Sortase family
PBIEDHHO_00762 7.9e-267 citS 2.7.13.3 T Signal transduction histidine kinase regulating citrate malate metabolism
PBIEDHHO_00763 6e-115 citT T response regulator
PBIEDHHO_00764 1.7e-171 yflP S Tripartite tricarboxylate transporter family receptor
PBIEDHHO_00765 7.4e-223 citM C Citrate transporter
PBIEDHHO_00766 4.6e-143 yflN S COG0491 Zn-dependent hydrolases, including glyoxylases
PBIEDHHO_00767 1.9e-211 nos 1.14.14.47 C Belongs to the NOS family. Bacterial NOS oxygenase subfamily
PBIEDHHO_00768 1.3e-41 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PBIEDHHO_00769 2.3e-119 yflK S protein conserved in bacteria
PBIEDHHO_00770 1.5e-14 yflJ S Protein of unknown function (DUF2639)
PBIEDHHO_00771 1.6e-18 yflI
PBIEDHHO_00772 9e-50 yflH S Protein of unknown function (DUF3243)
PBIEDHHO_00773 6.8e-136 map 3.4.11.18 E Methionine aminopeptidase
PBIEDHHO_00774 2.4e-240 nagE 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G COG1263 Phosphotransferase system IIC components, glucose maltose N-acetylglucosamine-specific
PBIEDHHO_00775 8.2e-73 yfmQ S Uncharacterised protein from bacillus cereus group
PBIEDHHO_00776 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
PBIEDHHO_00777 4.7e-61 yhdN S Domain of unknown function (DUF1992)
PBIEDHHO_00778 4.5e-76 cotP O Belongs to the small heat shock protein (HSP20) family
PBIEDHHO_00779 1.4e-37 ydgA S Spore germination protein gerPA/gerPF
PBIEDHHO_00780 1.2e-39 ydgB S Spore germination protein gerPA/gerPF
PBIEDHHO_00781 2.3e-238 treP 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PBIEDHHO_00782 0.0 treC 3.2.1.93 GH13 G COG0366 Glycosidases
PBIEDHHO_00783 6.1e-126 treR K transcriptional
PBIEDHHO_00784 4.6e-120 yfkO C nitroreductase
PBIEDHHO_00785 3.8e-118 yibF S YibE/F-like protein
PBIEDHHO_00786 6.8e-185 yibE S YibE/F-like protein
PBIEDHHO_00787 0.0 cpdB 3.1.3.5, 3.1.3.6, 3.1.4.16 F COG0737 5'-nucleotidase 2',3'-cyclic phosphodiesterase and related esterases
PBIEDHHO_00788 1.6e-91 yfkM 1.11.1.6, 3.5.1.124 S protease
PBIEDHHO_00789 2.6e-178 K helix_turn _helix lactose operon repressor
PBIEDHHO_00790 3.2e-161 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PBIEDHHO_00791 4e-128 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PBIEDHHO_00792 8.4e-189 ydiM EGP Major facilitator Superfamily
PBIEDHHO_00793 3.3e-28 yfkK S Belongs to the UPF0435 family
PBIEDHHO_00794 3.9e-81 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PBIEDHHO_00795 1.5e-47 yfkI S gas vesicle protein
PBIEDHHO_00796 1.4e-142 yihY S Belongs to the UPF0761 family
PBIEDHHO_00797 1.7e-213 ycaD EGP COG0477 Permeases of the major facilitator superfamily
PBIEDHHO_00798 8e-183 cax P COG0387 Ca2 H antiporter
PBIEDHHO_00799 4.3e-141 yfkD S YfkD-like protein
PBIEDHHO_00800 2.6e-144 yfkC M Mechanosensitive ion channel
PBIEDHHO_00801 1.1e-217 yfkA S YfkB-like domain
PBIEDHHO_00802 4.9e-27 yfjT
PBIEDHHO_00803 4.9e-153 pdaA G deacetylase
PBIEDHHO_00804 1.5e-139 yfjR 1.1.1.31 I NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
PBIEDHHO_00805 2.1e-29
PBIEDHHO_00806 2.5e-183 corA P Mediates influx of magnesium ions
PBIEDHHO_00807 2.8e-157 yfjP 3.2.2.21 L COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
PBIEDHHO_00808 3.4e-266 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PBIEDHHO_00809 7.4e-80 O Subtilase family
PBIEDHHO_00810 1.3e-246 lmrA 3.6.3.44 V ABC transporter
PBIEDHHO_00811 0.0 KLT Protein kinase domain
PBIEDHHO_00819 4.7e-45 S YfzA-like protein
PBIEDHHO_00820 2.4e-189 yfjN J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PBIEDHHO_00821 6e-79 yfjM S Psort location Cytoplasmic, score
PBIEDHHO_00822 2.5e-186 acoA C COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PBIEDHHO_00823 2e-186 acoB C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PBIEDHHO_00824 6.8e-207 acoC 2.3.1.12, 2.3.1.61 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PBIEDHHO_00825 3.9e-238 acoL 1.8.1.4 C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PBIEDHHO_00826 0.0 acoR KQ COG3284 Transcriptional activator of acetoin glycerol metabolism
PBIEDHHO_00827 3.2e-15 sspH S Belongs to the SspH family
PBIEDHHO_00828 1e-259 aglB 3.2.1.122, 3.2.1.22, 3.2.1.86 GH4,GT4 G COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
PBIEDHHO_00829 4.3e-138 glvR F Helix-turn-helix domain, rpiR family
PBIEDHHO_00830 2.4e-292 glvC 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PBIEDHHO_00831 0.0 M Peptidase_G2, IMC autoproteolytic cleavage domain
PBIEDHHO_00832 1.9e-303 yfiB3 V ABC transporter
PBIEDHHO_00833 0.0 yfiC V COG1132 ABC-type multidrug transport system, ATPase and permease components
PBIEDHHO_00834 9.2e-63 mhqP S DoxX
PBIEDHHO_00835 1.5e-155 yfiE 1.13.11.2 S glyoxalase
PBIEDHHO_00836 3.7e-77 cyoE 2.5.1.141 O Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
PBIEDHHO_00837 1.7e-70 cyoE 2.5.1.141 O Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
PBIEDHHO_00838 2e-92 padR K transcriptional
PBIEDHHO_00839 9.7e-101 1.6.5.2 S NADPH-dependent FMN reductase
PBIEDHHO_00840 8.5e-172 yfiQ G COG3936 Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
PBIEDHHO_00841 2.2e-44 yrdF K ribonuclease inhibitor
PBIEDHHO_00842 6.1e-94 yfiT S Belongs to the metal hydrolase YfiT family
PBIEDHHO_00843 6.4e-285 yfiU EGP Major facilitator Superfamily
PBIEDHHO_00844 1.4e-78 yfiV K transcriptional
PBIEDHHO_00845 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PBIEDHHO_00846 5.5e-153 yfhB 5.3.3.17 S PhzF family
PBIEDHHO_00847 5.9e-103 yfhC C nitroreductase
PBIEDHHO_00848 1e-24 yfhD S YfhD-like protein
PBIEDHHO_00850 2.1e-163 yfhF S nucleoside-diphosphate sugar epimerase
PBIEDHHO_00851 3.1e-139 recX 2.4.1.337 GT4 S Modulates RecA activity
PBIEDHHO_00852 4.7e-46 yfhH S Protein of unknown function (DUF1811)
PBIEDHHO_00853 4.4e-112 yfhI EGP Major facilitator Superfamily
PBIEDHHO_00855 3.7e-160 mpr 3.4.21.19 M Belongs to the peptidase S1B family
PBIEDHHO_00856 8.3e-44 yfhJ S WVELL protein
PBIEDHHO_00857 1.1e-87 batE T Bacterial SH3 domain homologues
PBIEDHHO_00858 3.4e-31 yfhL S SdpI/YhfL protein family
PBIEDHHO_00859 2.5e-166 yfhM S Alpha/beta hydrolase family
PBIEDHHO_00860 5.1e-184 csbB GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
PBIEDHHO_00861 0.0 yfhO S Bacterial membrane protein YfhO
PBIEDHHO_00862 5.9e-180 yfhP S membrane-bound metal-dependent
PBIEDHHO_00863 1.6e-136 L Belongs to the 'phage' integrase family
PBIEDHHO_00864 9.3e-43 E Zn peptidase
PBIEDHHO_00865 1.4e-31 K Helix-turn-helix XRE-family like proteins
PBIEDHHO_00866 6.5e-17
PBIEDHHO_00867 1.7e-28
PBIEDHHO_00869 1.7e-15 S Uncharacterized protein YqaH
PBIEDHHO_00871 4.3e-70 S Phage regulatory protein Rha (Phage_pRha)
PBIEDHHO_00872 1.4e-09
PBIEDHHO_00874 3.8e-81 L DnaD domain protein
PBIEDHHO_00875 7.2e-27 S Loader and inhibitor of phage G40P
PBIEDHHO_00876 4.4e-170 dnaB 3.6.4.12 L replicative DNA helicase
PBIEDHHO_00877 2.4e-22
PBIEDHHO_00878 5.3e-19 S Phage-like element PBSX protein XtrA
PBIEDHHO_00879 2.7e-50 wecC 1.1.1.336 M ArpU family transcriptional regulator
PBIEDHHO_00880 5.2e-09 ftsK D Ftsk_gamma
PBIEDHHO_00884 5.9e-33 L HNH endonuclease
PBIEDHHO_00885 2.1e-47 L phage terminase small subunit
PBIEDHHO_00886 1.6e-268 S Terminase
PBIEDHHO_00887 2.3e-77 S Phage portal protein
PBIEDHHO_00888 1.2e-68 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
PBIEDHHO_00889 1.6e-118 S Phage capsid family
PBIEDHHO_00890 1.3e-19 L Phage gp6-like head-tail connector protein
PBIEDHHO_00891 4e-08 S Phage head-tail joining protein
PBIEDHHO_00892 8.4e-14 S Bacteriophage HK97-gp10, putative tail-component
PBIEDHHO_00894 2.9e-30 S Phage tail tube protein
PBIEDHHO_00896 4.3e-65 S Phage-related minor tail protein
PBIEDHHO_00897 1.9e-49 S Phage tail protein
PBIEDHHO_00898 9.7e-41 S Prophage endopeptidase tail
PBIEDHHO_00900 2.3e-102 E GDSL-like Lipase/Acylhydrolase family
PBIEDHHO_00901 1.3e-78 S Domain of unknown function (DUF2479)
PBIEDHHO_00904 4.6e-21 bhlA S BhlA holin family
PBIEDHHO_00905 1.3e-25 xhlB S SPP1 phage holin
PBIEDHHO_00906 4.6e-67 S N-acetylmuramoyl-L-alanine amidase activity
PBIEDHHO_00909 4.9e-82 S aspartate phosphatase
PBIEDHHO_00910 1.5e-12 S aspartate phosphatase
PBIEDHHO_00911 1.4e-203 mutY L A G-specific
PBIEDHHO_00912 1.8e-36 yfhS
PBIEDHHO_00913 2e-132 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PBIEDHHO_00915 4.4e-37 ygaB S YgaB-like protein
PBIEDHHO_00916 2.2e-104 ygaC J Belongs to the UPF0374 family
PBIEDHHO_00917 3.1e-301 ygaD V ABC transporter
PBIEDHHO_00918 5e-177 ygaE S Membrane
PBIEDHHO_00919 1.1e-242 gsaB 5.4.3.8 H Glutamate-1-semialdehyde aminotransferase
PBIEDHHO_00920 5e-84 bcp 1.11.1.15 O Peroxiredoxin
PBIEDHHO_00921 3.1e-80 perR P Belongs to the Fur family
PBIEDHHO_00922 2.1e-55 ygzB S UPF0295 protein
PBIEDHHO_00923 8.5e-162 ygxA S Nucleotidyltransferase-like
PBIEDHHO_00924 2.2e-38 S COG NOG14552 non supervised orthologous group
PBIEDHHO_00929 7.8e-08
PBIEDHHO_00937 1.6e-08
PBIEDHHO_00941 5.9e-275 C Na+/H+ antiporter family
PBIEDHHO_00942 1.8e-122 pepE 3.4.11.2, 3.4.13.21 E Belongs to the peptidase S51 family
PBIEDHHO_00943 0.0 thiC 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PBIEDHHO_00945 6.4e-230 oppA5 E PFAM extracellular solute-binding protein family 5
PBIEDHHO_00946 3.5e-145 appB P Binding-protein-dependent transport system inner membrane component
PBIEDHHO_00947 4.1e-127 appC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PBIEDHHO_00948 9.8e-135 oppD3 P Belongs to the ABC transporter superfamily
PBIEDHHO_00949 2.9e-131 oppF3 E Belongs to the ABC transporter superfamily
PBIEDHHO_00950 2e-285 katA 1.11.1.6 P serves to protect cells from the toxic effects of hydrogen peroxide
PBIEDHHO_00951 4.7e-179 S Amidohydrolase
PBIEDHHO_00952 4.3e-138 ssuB P COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component
PBIEDHHO_00953 5e-171 ssuA M Sulfonate ABC transporter
PBIEDHHO_00954 2.4e-142 ssuC P ABC transporter (permease)
PBIEDHHO_00955 1.8e-212 ssuD 1.14.14.5 C Catalyzes the desulfonation of aliphatic sulfonates
PBIEDHHO_00957 3.9e-41 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PBIEDHHO_00958 8.9e-78 ygaO
PBIEDHHO_00959 1.8e-22 K Transcriptional regulator
PBIEDHHO_00961 4.2e-107 yhzB S B3/4 domain
PBIEDHHO_00962 6.2e-221 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PBIEDHHO_00963 2.9e-168 yhbB S Putative amidase domain
PBIEDHHO_00964 2.2e-84 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PBIEDHHO_00965 3.2e-102 yhbD K Protein of unknown function (DUF4004)
PBIEDHHO_00966 3.6e-54 yhbE M COG1664 Integral membrane protein CcmA involved in cell shape determination
PBIEDHHO_00967 1.3e-56 yhbF M COG1664 Integral membrane protein CcmA involved in cell shape determination
PBIEDHHO_00969 0.0 prkA T Ser protein kinase
PBIEDHHO_00970 1.7e-213 yhbH S Belongs to the UPF0229 family
PBIEDHHO_00971 1.6e-71 yhbI K DNA-binding transcription factor activity
PBIEDHHO_00972 4.4e-96 yhbJ V COG1566 Multidrug resistance efflux pump
PBIEDHHO_00973 4.1e-284 yhcA EGP Major facilitator Superfamily
PBIEDHHO_00974 1e-98 yhcB 1.6.5.2 S NADPH-dependent FMN reductase
PBIEDHHO_00975 5.3e-49 yhcC
PBIEDHHO_00976 3.6e-52
PBIEDHHO_00977 3.7e-58 yhcF K Transcriptional regulator
PBIEDHHO_00978 7.4e-116 yhcG V ABC transporter, ATP-binding protein
PBIEDHHO_00979 7.2e-164 yhcH V ABC transporter, ATP-binding protein
PBIEDHHO_00980 7.9e-158 yhcI S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PBIEDHHO_00981 3.9e-30 cspB K 'Cold-shock' DNA-binding domain
PBIEDHHO_00982 1.2e-128 metQ M Belongs to the nlpA lipoprotein family
PBIEDHHO_00983 4e-182 yhcK 2.7.7.65 T COG2199 FOG GGDEF domain
PBIEDHHO_00984 8.6e-219 ydjN U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PBIEDHHO_00985 6.9e-40 amaB 3.5.1.6, 3.5.1.87 E COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases
PBIEDHHO_00986 4.4e-38 yhcM
PBIEDHHO_00987 6.3e-74 yhcN S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PBIEDHHO_00988 1.3e-154 yhcP
PBIEDHHO_00989 9.4e-113 yhcQ M Spore coat protein
PBIEDHHO_00990 3.8e-298 yhcR 3.1.3.5 F Belongs to the 5'-nucleotidase family
PBIEDHHO_00991 6.9e-99 yhcS 3.4.22.70 M COG3764 Sortase (surface protein transpeptidase)
PBIEDHHO_00992 3.9e-162 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PBIEDHHO_00993 1.7e-61 yhcU S Family of unknown function (DUF5365)
PBIEDHHO_00994 8.4e-67 yhcV S COG0517 FOG CBS domain
PBIEDHHO_00995 1e-122 yhcW 5.4.2.6 S hydrolase
PBIEDHHO_00996 1.9e-302 yhcX 3.5.1.3 K Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
PBIEDHHO_00997 2.2e-254 yhxA E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PBIEDHHO_00998 3.2e-101 glpP K Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
PBIEDHHO_00999 1.7e-143 glpF G Belongs to the MIP aquaporin (TC 1.A.8) family
PBIEDHHO_01000 8.9e-289 glpK 2.7.1.30 C Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PBIEDHHO_01001 0.0 glpD 1.1.5.3 C Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
PBIEDHHO_01002 0.0 pmmB 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
PBIEDHHO_01003 1.6e-192 yhcY 2.7.13.3 T Histidine kinase
PBIEDHHO_01004 2.5e-107 yhcZ K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PBIEDHHO_01005 5e-85 azr 1.7.1.6 S NADPH-dependent FMN reductase
PBIEDHHO_01006 8e-38 yhdB S YhdB-like protein
PBIEDHHO_01007 1.3e-51 yhdC S Protein of unknown function (DUF3889)
PBIEDHHO_01008 2e-200 sle1 3.5.1.28 CBM50 M COG1388 FOG LysM repeat
PBIEDHHO_01009 5.8e-71 nsrR K Transcriptional regulator
PBIEDHHO_01010 3.5e-248 ygxB M Conserved TM helix
PBIEDHHO_01011 4.2e-264 ycgB S Stage V sporulation protein R
PBIEDHHO_01012 6.2e-252 phoB 3.1.3.1 P Belongs to the alkaline phosphatase family
PBIEDHHO_01013 3.3e-123 lytE 3.5.1.28 CBM50 M COG1388 FOG LysM repeat
PBIEDHHO_01014 2.8e-157 citR K Transcriptional regulator
PBIEDHHO_01015 4.6e-197 citA 2.3.3.1 C Belongs to the citrate synthase family
PBIEDHHO_01016 3.6e-143 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PBIEDHHO_01017 6.1e-247 yhdG E amino acid
PBIEDHHO_01018 1.6e-196 yhdH S Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
PBIEDHHO_01019 8.1e-45 yhdK S Sigma-M inhibitor protein
PBIEDHHO_01020 3.2e-195 yhdL S Sigma factor regulator N-terminal
PBIEDHHO_01021 4.2e-86 sigM K Belongs to the sigma-70 factor family. ECF subfamily
PBIEDHHO_01022 5.8e-106 plsC 2.3.1.51 I Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
PBIEDHHO_01023 4e-240 corC1 S COG1253 Hemolysins and related proteins containing CBS domains
PBIEDHHO_01024 1.8e-69 cueR K transcriptional
PBIEDHHO_01025 1.5e-217 yhdR 2.6.1.1 E Aminotransferase
PBIEDHHO_01026 3.3e-228 pksF 2.3.1.179, 2.3.1.41 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PBIEDHHO_01027 4.2e-248 corC1 P COG1253 Hemolysins and related proteins containing CBS domains
PBIEDHHO_01028 8.8e-49 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PBIEDHHO_01029 3.4e-54 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PBIEDHHO_01030 1.2e-121 yhdW 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PBIEDHHO_01032 2.7e-197 yhdY M Mechanosensitive ion channel
PBIEDHHO_01033 1.7e-134 cobB K NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form
PBIEDHHO_01034 5.5e-150 yheN G deacetylase
PBIEDHHO_01035 2.7e-149 dat 2.6.1.21 E Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in the first half-reaction
PBIEDHHO_01036 1.1e-81 pksA K Transcriptional regulator
PBIEDHHO_01037 7e-90 ymcC S Membrane
PBIEDHHO_01038 1.5e-83 T universal stress protein
PBIEDHHO_01039 0.0 yheI V COG1132 ABC-type multidrug transport system, ATPase and permease components
PBIEDHHO_01040 0.0 yheH V COG1132 ABC-type multidrug transport system, ATPase and permease components
PBIEDHHO_01041 1.9e-99 yheG GM NAD(P)H-binding
PBIEDHHO_01043 3.8e-28 sspB S spore protein
PBIEDHHO_01044 1.7e-36 yheE S Family of unknown function (DUF5342)
PBIEDHHO_01045 1.1e-248 gshB 6.3.2.2, 6.3.2.3 HJ YheC/D like ATP-grasp
PBIEDHHO_01046 6.1e-202 yheC HJ YheC/D like ATP-grasp
PBIEDHHO_01047 8.5e-199 yheB S Belongs to the UPF0754 family
PBIEDHHO_01048 2.8e-52 yheA S Belongs to the UPF0342 family
PBIEDHHO_01049 2.7e-152 yhaX S haloacid dehalogenase-like hydrolase
PBIEDHHO_01050 1.1e-291 hemZ H coproporphyrinogen III oxidase
PBIEDHHO_01051 1.1e-245 iucD 1.14.13.59 Q L-lysine 6-monooxygenase (NADPH-requiring)
PBIEDHHO_01052 5.5e-204 yhaU P COG0475 Kef-type K transport systems, membrane components
PBIEDHHO_01053 8.6e-87 yhaT P regulatory, ligand-binding protein related to C-terminal domains of K channels
PBIEDHHO_01055 1.2e-132 yhaR 5.3.3.18 I enoyl-CoA hydratase
PBIEDHHO_01056 1.2e-14 S YhzD-like protein
PBIEDHHO_01057 5.9e-163 yhaQ S ABC transporter, ATP-binding protein
PBIEDHHO_01058 1.7e-203 yhaP CP COG1668 ABC-type Na efflux pump, permease component
PBIEDHHO_01059 9.1e-231 yhaO L DNA repair exonuclease
PBIEDHHO_01060 0.0 yhaN L AAA domain
PBIEDHHO_01061 1.1e-175 yhaM L Shows a 3'-5' exoribonuclease activity
PBIEDHHO_01062 2.3e-31 yhaL S Sporulation protein YhaL
PBIEDHHO_01063 1.1e-113 prsA 5.2.1.8 M plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PBIEDHHO_01064 1e-93 yhaK S Putative zincin peptidase
PBIEDHHO_01065 9.9e-55 yhaI S Protein of unknown function (DUF1878)
PBIEDHHO_01066 1.5e-109 hpr K Negative regulator of protease production and sporulation
PBIEDHHO_01067 9e-38 yhaH S YtxH-like protein
PBIEDHHO_01068 2e-17
PBIEDHHO_01069 1.3e-74 trpP S Tryptophan transporter TrpP
PBIEDHHO_01070 1.5e-197 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PBIEDHHO_01071 2.4e-80 hit FG COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
PBIEDHHO_01072 4.4e-135 ecsA V transporter (ATP-binding protein)
PBIEDHHO_01073 5.7e-217 ecsB U ABC transporter
PBIEDHHO_01074 1.1e-116 ecsC S EcsC protein family
PBIEDHHO_01075 1.4e-215 yhaA 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
PBIEDHHO_01076 2.5e-237 yhfA C membrane
PBIEDHHO_01077 6e-88 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
PBIEDHHO_01078 0.0 pbpF 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PBIEDHHO_01079 1.9e-198 hemE 4.1.1.37 H Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
PBIEDHHO_01080 1.7e-176 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
PBIEDHHO_01081 6.6e-273 hemG 1.14.19.9, 1.3.3.15, 1.3.3.4 H Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
PBIEDHHO_01082 3.5e-100 yhgD K Transcriptional regulator
PBIEDHHO_01083 1.6e-255 yhgE S YhgE Pip N-terminal domain protein
PBIEDHHO_01084 1.3e-176 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PBIEDHHO_01086 1.5e-194 yhfE 3.2.1.4 GH5,GH9 G peptidase M42
PBIEDHHO_01087 1.2e-225 gltP C Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PBIEDHHO_01088 6.2e-134 yhfI S COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III
PBIEDHHO_01089 1.7e-187 lplJ 6.3.1.20 H Lipoate-protein ligase
PBIEDHHO_01090 5.7e-107 yhfK GM NmrA-like family
PBIEDHHO_01091 1.7e-295 fadD 6.2.1.3 IQ AMP-binding enzyme C-terminal domain
PBIEDHHO_01092 8.1e-64 yhfM
PBIEDHHO_01093 5.4e-231 yhfN 3.4.24.84 O Peptidase M48
PBIEDHHO_01094 1.6e-200 aprE 3.4.21.62 O Belongs to the peptidase S8 family
PBIEDHHO_01095 7e-129 yhfQ P COG4594 ABC-type Fe3 -citrate transport system, periplasmic component
PBIEDHHO_01096 1.2e-100 yhfR 3.1.3.73 G Belongs to the phosphoglycerate mutase family
PBIEDHHO_01097 1.4e-193 vraB 2.3.1.9 I Belongs to the thiolase family
PBIEDHHO_01098 6.2e-263 yhfT 6.2.1.3 IQ AMP-binding enzyme C-terminal domain
PBIEDHHO_01099 3.1e-85 bioY S BioY family
PBIEDHHO_01100 2.4e-197 hemAT NT chemotaxis protein
PBIEDHHO_01101 1e-262 yhfW CE COG0665 Glycine D-amino acid oxidases (deaminating)
PBIEDHHO_01102 1.4e-158 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PBIEDHHO_01103 1.2e-30 yhzC S IDEAL
PBIEDHHO_01104 4.2e-109 comK K Competence transcription factor
PBIEDHHO_01105 4.1e-57 frataxin S Domain of unknown function (DU1801)
PBIEDHHO_01106 6.1e-171 els S Acetyltransferase, GNAT family
PBIEDHHO_01107 1.2e-121 yrpD S Domain of unknown function, YrpD
PBIEDHHO_01108 7.8e-42 yhjA S Excalibur calcium-binding domain
PBIEDHHO_01109 3.3e-47 S Belongs to the UPF0145 family
PBIEDHHO_01110 1.2e-261 yhjB E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PBIEDHHO_01111 3.1e-27 yhjC S Protein of unknown function (DUF3311)
PBIEDHHO_01112 7.9e-58 yhjD
PBIEDHHO_01113 1e-105 yhjE S SNARE associated Golgi protein
PBIEDHHO_01114 6.6e-90 sipV 3.4.21.89 U Belongs to the peptidase S26 family
PBIEDHHO_01115 3.4e-264 yhjG CH FAD binding domain
PBIEDHHO_01116 6.1e-91 yhjH K helix_turn_helix multiple antibiotic resistance protein
PBIEDHHO_01117 7.9e-184 abrB S membrane
PBIEDHHO_01118 2.6e-198 blt EGP Major facilitator Superfamily
PBIEDHHO_01119 3.5e-106 K QacR-like protein, C-terminal region
PBIEDHHO_01120 1.4e-82 yhjR S Rubrerythrin
PBIEDHHO_01121 1.2e-118 ydfS S Protein of unknown function (DUF421)
PBIEDHHO_01122 0.0 addB 3.1.21.3, 3.6.4.12 L ATP-dependent helicase deoxyribonuclease subunit B
PBIEDHHO_01123 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PBIEDHHO_01124 2.6e-219 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PBIEDHHO_01125 0.0 sbcC L COG0419 ATPase involved in DNA repair
PBIEDHHO_01126 3.9e-50 yisB V COG1403 Restriction endonuclease
PBIEDHHO_01127 1.7e-31 gerPF S Spore germination protein gerPA/gerPF
PBIEDHHO_01128 2.1e-59 gerPE S Spore germination protein GerPE
PBIEDHHO_01129 7.7e-22 gerPD S Spore germination protein
PBIEDHHO_01130 5.9e-61 gerPC S Spore germination protein
PBIEDHHO_01131 4.8e-32 gerPB S cell differentiation
PBIEDHHO_01132 8.4e-34 gerPA S Spore germination protein
PBIEDHHO_01133 1.6e-08 yisI S Spo0E like sporulation regulatory protein
PBIEDHHO_01134 2e-166 yisK Q COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
PBIEDHHO_01135 1.9e-59 yisL S UPF0344 protein
PBIEDHHO_01136 0.0 wprA O Belongs to the peptidase S8 family
PBIEDHHO_01137 3.1e-90 yisN S Protein of unknown function (DUF2777)
PBIEDHHO_01138 0.0 asnO 6.3.5.4 E Asparagine synthase
PBIEDHHO_01139 7e-117 crtB 2.5.1.21, 2.5.1.32, 2.5.1.99 I phytoene
PBIEDHHO_01140 1e-241 yisQ V Mate efflux family protein
PBIEDHHO_01141 8e-157 yisR K Transcriptional regulator
PBIEDHHO_01142 8.6e-142 purR K helix_turn _helix lactose operon repressor
PBIEDHHO_01143 4.4e-154 yisS 1.1.1.370 S Oxidoreductase family, C-terminal alpha/beta domain
PBIEDHHO_01144 5.2e-77 yisT S DinB family
PBIEDHHO_01145 1e-73 argO S Lysine exporter protein LysE YggA
PBIEDHHO_01146 1e-188 yisV K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PBIEDHHO_01147 2.4e-49 mcbG S Pentapeptide repeats (9 copies)
PBIEDHHO_01148 6e-76 yjcF S Acetyltransferase (GNAT) domain
PBIEDHHO_01149 0.0 yitJ 1.5.1.20, 2.1.1.10, 2.1.1.13 E Catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
PBIEDHHO_01150 5e-31 yajQ S Belongs to the UPF0234 family
PBIEDHHO_01151 1.1e-07 yajQ S Belongs to the UPF0234 family
PBIEDHHO_01152 3.9e-156 cvfB S protein conserved in bacteria
PBIEDHHO_01153 5e-147 yufN S ABC transporter substrate-binding protein PnrA-like
PBIEDHHO_01154 1.9e-175 yvaQ NT Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PBIEDHHO_01155 1.3e-232 cypC 1.11.2.4, 1.14.14.1 Q Cytochrome P450
PBIEDHHO_01157 1.3e-154 yitS S protein conserved in bacteria
PBIEDHHO_01158 8.7e-148 yitT S Uncharacterized protein conserved in bacteria (DUF2179)
PBIEDHHO_01159 1.2e-79 ipi S Intracellular proteinase inhibitor
PBIEDHHO_01160 9.8e-26 S Protein of unknown function (DUF3813)
PBIEDHHO_01161 2e-07
PBIEDHHO_01162 4.4e-149 yitU 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
PBIEDHHO_01163 3.2e-141 yjfP S COG1073 Hydrolases of the alpha beta superfamily
PBIEDHHO_01164 4.7e-51 yitW S metal-sulfur cluster biosynthetic enzyme
PBIEDHHO_01165 3.6e-70 fosB 2.5.1.18 H Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor
PBIEDHHO_01166 5.1e-265 yitY C D-arabinono-1,4-lactone oxidase
PBIEDHHO_01167 9.4e-87 norB G Major Facilitator Superfamily
PBIEDHHO_01168 1.4e-192 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PBIEDHHO_01169 3.2e-220 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PBIEDHHO_01170 9.8e-130 argB 2.7.2.8 F Belongs to the acetylglutamate kinase family. ArgB subfamily
PBIEDHHO_01171 2.2e-210 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
PBIEDHHO_01172 1.4e-195 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PBIEDHHO_01173 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase ammonia chain
PBIEDHHO_01174 3.4e-172 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PBIEDHHO_01175 2.1e-27 yjzC S YjzC-like protein
PBIEDHHO_01176 6.3e-22 yjzD S Protein of unknown function (DUF2929)
PBIEDHHO_01177 2.9e-131 yjaU I carboxylic ester hydrolase activity
PBIEDHHO_01178 5.5e-98 yjaV
PBIEDHHO_01179 2e-163 med S Transcriptional activator protein med
PBIEDHHO_01180 3.3e-26 comZ S ComZ
PBIEDHHO_01182 1.6e-171 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PBIEDHHO_01183 1.2e-230 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PBIEDHHO_01184 3.6e-140 yjaZ O Zn-dependent protease
PBIEDHHO_01185 1.6e-180 appD P Belongs to the ABC transporter superfamily
PBIEDHHO_01186 5.7e-183 appF E Belongs to the ABC transporter superfamily
PBIEDHHO_01187 0.0 appA E COG0747 ABC-type dipeptide transport system, periplasmic component
PBIEDHHO_01188 4.8e-171 oppB P COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PBIEDHHO_01189 1.8e-162 appC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PBIEDHHO_01190 5.5e-146 yjbA S Belongs to the UPF0736 family
PBIEDHHO_01191 8e-185 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
PBIEDHHO_01192 0.0 oppA E ABC transporter substrate-binding protein
PBIEDHHO_01193 7.8e-166 oppB P COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PBIEDHHO_01194 6.5e-165 oppC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PBIEDHHO_01195 1.2e-199 oppD P Belongs to the ABC transporter superfamily
PBIEDHHO_01196 8.8e-170 oppF E Belongs to the ABC transporter superfamily
PBIEDHHO_01197 9.2e-220 S Putative glycosyl hydrolase domain
PBIEDHHO_01198 2.9e-102 yjbC K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PBIEDHHO_01199 1.6e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PBIEDHHO_01200 1.1e-108 yjbE P Integral membrane protein TerC family
PBIEDHHO_01201 5e-115 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
PBIEDHHO_01202 1.9e-201 yjbF S Competence protein
PBIEDHHO_01203 0.0 pepF E oligoendopeptidase F
PBIEDHHO_01204 5.8e-19
PBIEDHHO_01205 2.6e-166 yjbH Q dithiol-disulfide isomerase involved in polyketide biosynthesis
PBIEDHHO_01206 5.9e-70 yjbI S Bacterial-like globin
PBIEDHHO_01207 7.9e-107 yjbJ M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
PBIEDHHO_01208 7.1e-93 yjbK S protein conserved in bacteria
PBIEDHHO_01209 5e-60 yjbL S Belongs to the UPF0738 family
PBIEDHHO_01210 1.9e-107 yjbM 2.7.6.5 S GTP pyrophosphokinase
PBIEDHHO_01211 3.9e-150 nadK 2.7.1.23 G Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PBIEDHHO_01212 4.1e-156 yjbO 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PBIEDHHO_01213 5.5e-138 prpE 3.1.3.16, 3.6.1.41 T Asymmetrically hydrolyzes Ap4p to yield AMP and ATP
PBIEDHHO_01214 1.8e-307 yjbQ P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PBIEDHHO_01215 8.7e-133 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PBIEDHHO_01216 4e-102 tenI 2.5.1.3, 5.3.99.10 H Transcriptional regulator TenI
PBIEDHHO_01217 1.8e-201 thiO 1.4.3.19 E Glycine oxidase
PBIEDHHO_01218 7.5e-29 thiS H Thiamine biosynthesis
PBIEDHHO_01219 2.6e-135 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PBIEDHHO_01220 3e-179 thiF 2.7.7.73, 2.7.7.80 H COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
PBIEDHHO_01221 2.6e-141 thiD 2.5.1.3, 2.7.1.35, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PBIEDHHO_01222 6.8e-139 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
PBIEDHHO_01223 5.4e-72 yjbX S Spore coat protein
PBIEDHHO_01224 1.8e-80 cotZ S Spore coat protein
PBIEDHHO_01225 1.3e-92 cotY S Spore coat protein Z
PBIEDHHO_01226 1.3e-69 cotX S Spore Coat Protein X and V domain
PBIEDHHO_01227 1.4e-21 cotW
PBIEDHHO_01228 6.3e-53 cotV S Spore Coat Protein X and V domain
PBIEDHHO_01229 2.8e-55 yjcA S Protein of unknown function (DUF1360)
PBIEDHHO_01233 8.4e-38 spoVIF S Stage VI sporulation protein F
PBIEDHHO_01234 0.0 yjcD 3.6.4.12 L DNA helicase
PBIEDHHO_01235 6.2e-33
PBIEDHHO_01236 2.4e-125 blm 3.5.2.6 S Belongs to the metallo-beta-lactamase superfamily. Class-B beta-lactamase family
PBIEDHHO_01237 1.2e-104 S ABC-2 type transporter
PBIEDHHO_01238 2.1e-129 nodI V AAA domain, putative AbiEii toxin, Type IV TA system
PBIEDHHO_01239 8.8e-34 K SpoVT / AbrB like domain
PBIEDHHO_01240 2e-71 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PBIEDHHO_01241 7.8e-91 yjcG J Belongs to the 2H phosphoesterase superfamily. YjcG family
PBIEDHHO_01242 1.2e-121 yjcH P COG2382 Enterochelin esterase and related enzymes
PBIEDHHO_01243 1.8e-209 metB 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PBIEDHHO_01244 1.7e-213 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PBIEDHHO_01246 5.9e-55
PBIEDHHO_01247 2.6e-74 yobL S Bacterial EndoU nuclease
PBIEDHHO_01248 4.5e-31
PBIEDHHO_01249 7.1e-90 yokH G SMI1 / KNR4 family
PBIEDHHO_01250 5.5e-103 1.1.1.169 H 2-dehydropantoate 2-reductase
PBIEDHHO_01251 4.3e-22 yokK S SMI1 / KNR4 family
PBIEDHHO_01252 3e-62 H Acetyltransferase (GNAT) domain
PBIEDHHO_01253 3.7e-25
PBIEDHHO_01254 1.1e-197 K Psort location Cytoplasmic, score
PBIEDHHO_01255 6.4e-311 K Psort location Cytoplasmic, score
PBIEDHHO_01256 3.5e-36 S YolD-like protein
PBIEDHHO_01257 5.8e-46 dinB2 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PBIEDHHO_01258 2.2e-28 S Bacillus cereus group antimicrobial protein
PBIEDHHO_01263 1.6e-26 N Kelch motif
PBIEDHHO_01265 6.8e-154 bla 3.5.2.6 V beta-lactamase
PBIEDHHO_01266 1.2e-45 yjcS S Antibiotic biosynthesis monooxygenase
PBIEDHHO_01267 1.8e-238 yfjF EGP Belongs to the major facilitator superfamily
PBIEDHHO_01268 2.2e-76 napB K helix_turn_helix multiple antibiotic resistance protein
PBIEDHHO_01269 1.8e-217 ganA 3.2.1.89 G arabinogalactan
PBIEDHHO_01270 3.7e-299 lacE 2.7.1.196, 2.7.1.205, 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PBIEDHHO_01271 3.4e-49 lacF 2.7.1.207 G phosphotransferase system
PBIEDHHO_01272 1.6e-279 lacG 3.2.1.85 G Belongs to the glycosyl hydrolase 1 family
PBIEDHHO_01273 1.4e-136 lacR K COG1349 Transcriptional regulators of sugar metabolism
PBIEDHHO_01274 5.8e-118 5.4.2.6 S Haloacid dehalogenase-like hydrolase
PBIEDHHO_01275 7.6e-34
PBIEDHHO_01276 4.5e-52 K helix_turn_helix multiple antibiotic resistance protein
PBIEDHHO_01277 2.2e-103 yhiD S MgtC SapB transporter
PBIEDHHO_01279 5.4e-20 yjfB S Putative motility protein
PBIEDHHO_01280 5.9e-62 T PhoQ Sensor
PBIEDHHO_01281 2.9e-94 yjgB S Domain of unknown function (DUF4309)
PBIEDHHO_01282 0.0 yjgC 1.17.1.10, 1.17.1.9 C formate dehydrogenase, alpha subunit
PBIEDHHO_01283 9.4e-87 yjgD S Protein of unknown function (DUF1641)
PBIEDHHO_01284 2e-214 yjiB 1.14.13.154, 1.14.15.8 C Cytochrome P450
PBIEDHHO_01285 1.8e-215 oleD GT1 CG COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
PBIEDHHO_01286 6.8e-29
PBIEDHHO_01287 4.7e-141 hemD 2.1.1.107, 4.2.1.75 H Uroporphyrinogen-III synthase
PBIEDHHO_01288 3.8e-118 ybbM S transport system, permease component
PBIEDHHO_01289 1.1e-125 pstB 3.6.3.27 P Belongs to the ABC transporter superfamily
PBIEDHHO_01290 5.9e-172 yjlA EG Putative multidrug resistance efflux transporter
PBIEDHHO_01291 7.3e-86 yjlB S Cupin domain
PBIEDHHO_01292 7e-66 yjlC S Protein of unknown function (DUF1641)
PBIEDHHO_01293 3.2e-217 yjlD 1.6.99.3 C NADH dehydrogenase
PBIEDHHO_01294 3.7e-79 uxaC 5.3.1.12 G glucuronate isomerase
PBIEDHHO_01295 5.4e-181 exuR K transcriptional
PBIEDHHO_01296 6.3e-160 uxaA 4.2.1.7, 4.4.1.24 G Altronate
PBIEDHHO_01297 5.2e-87 T Transcriptional regulatory protein, C terminal
PBIEDHHO_01298 2.9e-129 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PBIEDHHO_01300 6.9e-128 MA20_18170 S membrane transporter protein
PBIEDHHO_01301 4.9e-76 yjoA S DinB family
PBIEDHHO_01302 3.2e-214 S response regulator aspartate phosphatase
PBIEDHHO_01304 3.1e-162 xlyA 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
PBIEDHHO_01305 6.8e-60 yjqA S Bacterial PH domain
PBIEDHHO_01306 4.8e-100 yjqB S phage-related replication protein
PBIEDHHO_01307 1.5e-106 xkdA E IrrE N-terminal-like domain
PBIEDHHO_01308 2.6e-55 xre K Helix-turn-helix XRE-family like proteins
PBIEDHHO_01310 3.2e-144 xkdC L Bacterial dnaA protein
PBIEDHHO_01313 4.5e-10 yqaO S Phage-like element PBSX protein XtrA
PBIEDHHO_01314 8.5e-82 xpf K COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
PBIEDHHO_01315 1.1e-107 xtmA L phage terminase small subunit
PBIEDHHO_01316 1.6e-209 xtmB S phage terminase, large subunit
PBIEDHHO_01317 2.5e-240 yqbA S portal protein
PBIEDHHO_01318 7.5e-91 xkdF 2.1.1.72 L Putative phage serine protease XkdF
PBIEDHHO_01319 3e-157 xkdG S Phage capsid family
PBIEDHHO_01320 1.3e-45 yqbG S Protein of unknown function (DUF3199)
PBIEDHHO_01321 3.3e-40 yqbH S Domain of unknown function (DUF3599)
PBIEDHHO_01322 4.1e-60 xkdI S Bacteriophage HK97-gp10, putative tail-component
PBIEDHHO_01323 5.8e-58 xkdJ
PBIEDHHO_01324 6.3e-15
PBIEDHHO_01325 3.2e-224 xkdK S Phage tail sheath C-terminal domain
PBIEDHHO_01326 2e-74 xkdM S Phage tail tube protein
PBIEDHHO_01327 1.7e-73 S Phage XkdN-like tail assembly chaperone protein, TAC
PBIEDHHO_01328 3.4e-19
PBIEDHHO_01329 7.1e-194 xkdO L Transglycosylase SLT domain
PBIEDHHO_01330 1.3e-111 xkdP S Lysin motif
PBIEDHHO_01331 2.9e-163 xkdQ 3.2.1.96 G NLP P60 protein
PBIEDHHO_01332 8.5e-33 xkdR S Protein of unknown function (DUF2577)
PBIEDHHO_01333 2.1e-57 xkdS S Protein of unknown function (DUF2634)
PBIEDHHO_01334 7.4e-165 xkdT S Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
PBIEDHHO_01335 7.2e-85 xkdU S Uncharacterised protein conserved in bacteria (DUF2313)
PBIEDHHO_01336 6.1e-26
PBIEDHHO_01337 8.6e-182
PBIEDHHO_01338 1.3e-43 xkdW S XkdW protein
PBIEDHHO_01339 3.4e-16 xkdX
PBIEDHHO_01340 1.3e-105 xepA
PBIEDHHO_01341 7.4e-37 xhlA S Haemolysin XhlA
PBIEDHHO_01342 4.3e-37 xhlB S SPP1 phage holin
PBIEDHHO_01343 7.6e-163 xlyA 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
PBIEDHHO_01344 8.7e-23 spoIISB S Stage II sporulation protein SB
PBIEDHHO_01345 1.7e-131 spoIISA S Toxin SpoIISA, type II toxin-antitoxin system
PBIEDHHO_01346 2.4e-173 pit P phosphate transporter
PBIEDHHO_01347 6.9e-110 ykaA P COG1392 Phosphate transport regulator (distant homolog of PhoU)
PBIEDHHO_01348 1.4e-240 steT E amino acid
PBIEDHHO_01349 5.3e-178 mhqA E COG0346 Lactoylglutathione lyase and related lyases
PBIEDHHO_01350 5.2e-298 ykcB M COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PBIEDHHO_01351 1.2e-177 ykcC GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
PBIEDHHO_01353 5e-198 htrA 3.4.21.107 O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PBIEDHHO_01354 6.7e-263 yubD P Major Facilitator Superfamily
PBIEDHHO_01355 3.6e-154 dppA E D-aminopeptidase
PBIEDHHO_01356 3.5e-158 dppB P COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PBIEDHHO_01357 5.3e-170 dppC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PBIEDHHO_01358 3e-182 dppD P Belongs to the ABC transporter superfamily
PBIEDHHO_01359 1.3e-309 dppE E ABC transporter substrate-binding protein
PBIEDHHO_01360 1.9e-172 ykfA 3.4.17.13 V proteins, homologs of microcin C7 resistance protein MccF
PBIEDHHO_01361 1.1e-190 ykfB 5.1.1.20 M Belongs to the mandelate racemase muconate lactonizing enzyme family
PBIEDHHO_01362 2.4e-156 ykfC 3.4.14.13 M COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
PBIEDHHO_01363 4.4e-180 ykfD E Belongs to the ABC transporter superfamily
PBIEDHHO_01364 1.4e-200 pgl 3.1.1.31 G 6-phosphogluconolactonase
PBIEDHHO_01365 1.5e-131 ykgA E Amidinotransferase
PBIEDHHO_01366 8.4e-93 ykhA 3.1.2.20 I Acyl-CoA hydrolase
PBIEDHHO_01367 4.4e-92 ykkB 2.3.1.128 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PBIEDHHO_01368 1.2e-48 ykkC P Multidrug resistance protein
PBIEDHHO_01369 1e-48 ykkD P Multidrug resistance protein
PBIEDHHO_01370 4.4e-166 purU 2.7.7.72, 3.5.1.10 F Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4)
PBIEDHHO_01371 4.4e-200 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PBIEDHHO_01372 3.3e-220 proA 1.2.1.41, 1.2.1.81 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PBIEDHHO_01373 4.1e-69 ohrA O Organic hydroperoxide resistance protein
PBIEDHHO_01374 7.5e-78 ohrR K COG1846 Transcriptional regulators
PBIEDHHO_01375 7.9e-70 ohrB O Organic hydroperoxide resistance protein
PBIEDHHO_01376 2.9e-51 D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
PBIEDHHO_01378 6e-205 M Glycosyl transferase family 2
PBIEDHHO_01379 1e-110 3.2.1.4 GH5,GH9 K Collagen triple helix repeat
PBIEDHHO_01380 4e-207 hcaT 1.5.1.2 EGP Major facilitator Superfamily
PBIEDHHO_01381 9.9e-118 yeiL T COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
PBIEDHHO_01382 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PBIEDHHO_01383 6.8e-173 isp O Belongs to the peptidase S8 family
PBIEDHHO_01384 3e-140 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PBIEDHHO_01385 7.1e-125 ykoC P Cobalt transport protein
PBIEDHHO_01386 8.6e-277 P ABC transporter, ATP-binding protein
PBIEDHHO_01387 9.3e-96 ykoE S ABC-type cobalt transport system, permease component
PBIEDHHO_01388 7.9e-238 ydhD M Glycosyl hydrolase
PBIEDHHO_01390 3e-235 mgtE P Acts as a magnesium transporter
PBIEDHHO_01391 1.6e-52 tnrA K transcriptional
PBIEDHHO_01392 1.9e-16
PBIEDHHO_01393 5.9e-25 ykoL
PBIEDHHO_01394 4.2e-80 ykoM K transcriptional
PBIEDHHO_01395 4.1e-98 ykoP G polysaccharide deacetylase
PBIEDHHO_01396 0.0 ligD 6.5.1.1 L ATP-dependent DNA ligase
PBIEDHHO_01397 2.8e-149 ku L With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
PBIEDHHO_01398 0.0 ydcR 2.7.7.65 T Diguanylate cyclase
PBIEDHHO_01399 4.4e-95 ykoX S membrane-associated protein
PBIEDHHO_01400 5.4e-128 ykoY P COG0861 Membrane protein TerC, possibly involved in tellurium resistance
PBIEDHHO_01401 3.4e-127 sigI K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PBIEDHHO_01402 4.5e-118 rsgI S Anti-sigma factor N-terminus
PBIEDHHO_01403 9.6e-26 sspD S small acid-soluble spore protein
PBIEDHHO_01404 9.5e-124 ykrK S Domain of unknown function (DUF1836)
PBIEDHHO_01405 3.9e-154 htpX O Belongs to the peptidase M48B family
PBIEDHHO_01406 6.1e-236 ktrB P COG0168 Trk-type K transport systems, membrane components
PBIEDHHO_01407 3e-111 ydfR S Protein of unknown function (DUF421)
PBIEDHHO_01408 1.2e-19 ykzE
PBIEDHHO_01409 3.8e-190 ykrP G COG3594 Fucose 4-O-acetylase and related acetyltransferases
PBIEDHHO_01410 0.0 kinE 2.7.13.3 T Histidine kinase
PBIEDHHO_01411 5.4e-81 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PBIEDHHO_01413 1e-190 mtnA 5.3.1.23 E Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
PBIEDHHO_01414 5.9e-219 mtnK 2.7.1.100 F Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
PBIEDHHO_01415 7.3e-138 mtnU 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
PBIEDHHO_01416 5.2e-223 mtnE 2.6.1.83 E Aminotransferase
PBIEDHHO_01417 6.9e-223 mtnW 5.3.2.5 G Catalyzes the enolization of 2,3-diketo-5- methylthiopentyl-1-phosphate (DK-MTP-1-P) into 2-hydroxy-3-keto-5- methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P)
PBIEDHHO_01418 1.6e-131 mtnX 3.1.3.87, 4.2.1.109 E Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
PBIEDHHO_01419 1.2e-109 mtnB 3.1.3.87, 4.1.2.17, 4.2.1.109, 5.1.3.4 E Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P)
PBIEDHHO_01420 3.6e-91 mtnD 1.13.11.53, 1.13.11.54 S Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
PBIEDHHO_01421 4e-11 S Spo0E like sporulation regulatory protein
PBIEDHHO_01422 2.1e-269 kinD 2.7.13.3 T COG0642 Signal transduction histidine kinase
PBIEDHHO_01423 3.2e-77 ykvE K transcriptional
PBIEDHHO_01424 1.7e-121 motB N Flagellar motor protein
PBIEDHHO_01425 2.5e-136 motA N flagellar motor
PBIEDHHO_01426 0.0 clpE O Belongs to the ClpA ClpB family
PBIEDHHO_01427 6.4e-177 ykvI S membrane
PBIEDHHO_01428 4.9e-13
PBIEDHHO_01429 9.3e-146
PBIEDHHO_01430 1.5e-126 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
PBIEDHHO_01431 2.9e-78 queD 4.1.2.50, 4.2.3.12 H synthase
PBIEDHHO_01432 7.8e-137 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
PBIEDHHO_01433 7.7e-96 queF 1.7.1.13 S Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
PBIEDHHO_01434 1.8e-41 ykvR S Protein of unknown function (DUF3219)
PBIEDHHO_01435 1.7e-24 ykvS S protein conserved in bacteria
PBIEDHHO_01436 2.3e-27
PBIEDHHO_01437 1.1e-104 ykvT 3.5.1.28 M Cell Wall Hydrolase
PBIEDHHO_01438 2.7e-236 ykvU S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PBIEDHHO_01439 2.4e-81 stoA CO thiol-disulfide
PBIEDHHO_01440 0.0 cadA 3.6.3.3, 3.6.3.5 P COG2217 Cation transport ATPase
PBIEDHHO_01441 5e-204 pepQ 3.4.13.9 E COG0006 Xaa-Pro aminopeptidase
PBIEDHHO_01442 1.9e-170 ykvZ 5.1.1.1 K Transcriptional regulator
PBIEDHHO_01443 8.1e-154 glcT K antiterminator
PBIEDHHO_01444 0.0 ptsG 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PBIEDHHO_01445 2.1e-39 ptsH G phosphocarrier protein HPr
PBIEDHHO_01446 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PBIEDHHO_01447 6.7e-37 splA S Transcriptional regulator
PBIEDHHO_01448 1.8e-192 splB 4.1.99.14 L Spore photoproduct lyase
PBIEDHHO_01449 3.1e-255 mcpC NT chemotaxis protein
PBIEDHHO_01450 2.5e-158 glxR 1.1.1.31, 1.1.1.60 I COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
PBIEDHHO_01451 1.6e-48
PBIEDHHO_01452 2.2e-113 ykwD J protein with SCP PR1 domains
PBIEDHHO_01453 0.0 mrdA 3.4.16.4 M Penicillin-binding Protein
PBIEDHHO_01454 4.1e-288 pilS 2.1.1.80, 2.7.13.3, 3.1.1.61 T Histidine kinase
PBIEDHHO_01455 5.7e-214 patA 2.6.1.1 E Aminotransferase
PBIEDHHO_01456 1.4e-09
PBIEDHHO_01457 2.2e-165 cheV 2.7.13.3 T Chemotaxis protein CheV
PBIEDHHO_01458 3.2e-83 ykyB S YkyB-like protein
PBIEDHHO_01459 9.9e-236 ykuC EGP Major facilitator Superfamily
PBIEDHHO_01460 2.1e-82 ykuD S protein conserved in bacteria
PBIEDHHO_01461 7.5e-147 ykuE S Metallophosphoesterase
PBIEDHHO_01462 5.6e-138 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PBIEDHHO_01464 2.4e-231 ykuI T Diguanylate phosphodiesterase
PBIEDHHO_01465 2e-36 ykuJ S protein conserved in bacteria
PBIEDHHO_01466 1.7e-90 ykuK S Ribonuclease H-like
PBIEDHHO_01467 7.3e-26 ykzF S Antirepressor AbbA
PBIEDHHO_01468 1e-75 ykuL S CBS domain
PBIEDHHO_01469 2.3e-167 ccpC K Transcriptional regulator
PBIEDHHO_01470 2.4e-86 fld C Flavodoxin
PBIEDHHO_01471 8.6e-162 ykuO
PBIEDHHO_01472 1.3e-73 fld C Flavodoxin
PBIEDHHO_01473 4.8e-75 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PBIEDHHO_01474 6.7e-212 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PBIEDHHO_01475 1.8e-37 ykuS S Belongs to the UPF0180 family
PBIEDHHO_01476 1.6e-138 ykuT M Mechanosensitive ion channel
PBIEDHHO_01478 5.5e-72 ykuV CO thiol-disulfide
PBIEDHHO_01480 3.8e-97 rok K Repressor of ComK
PBIEDHHO_01481 3.3e-146 yknT
PBIEDHHO_01482 2.2e-100 mobA 2.7.7.77 H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
PBIEDHHO_01483 4.1e-184 moeB 2.7.7.73, 2.7.7.80 H COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
PBIEDHHO_01484 1.5e-239 moeA 2.10.1.1 H molybdopterin
PBIEDHHO_01485 1.7e-85 mobB 2.10.1.1, 2.7.7.77 H molybdopterin-guanine dinucleotide biosynthesis protein
PBIEDHHO_01486 6e-82 moaE 2.8.1.12 H COG0314 Molybdopterin converting factor, large subunit
PBIEDHHO_01487 4.1e-31 moaD 2.8.1.12 H Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
PBIEDHHO_01488 1.6e-99 yknW S Yip1 domain
PBIEDHHO_01489 9.9e-155 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PBIEDHHO_01490 5.1e-122 macB V ABC transporter, ATP-binding protein
PBIEDHHO_01491 4e-207 yknZ V ABC transporter (permease)
PBIEDHHO_01492 4.3e-130 fruR K Transcriptional regulator
PBIEDHHO_01493 7.1e-164 fruK 2.7.1.11, 2.7.1.56 G Belongs to the carbohydrate kinase PfkB family
PBIEDHHO_01494 0.0 fruA 2.7.1.202 GT COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type)
PBIEDHHO_01495 1.5e-106 sipT 3.4.21.89 U Belongs to the peptidase S26 family
PBIEDHHO_01496 6.4e-36 ykoA
PBIEDHHO_01497 5.5e-308 ybiT S COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PBIEDHHO_01498 1.3e-157 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PBIEDHHO_01499 9.5e-236 ampS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
PBIEDHHO_01500 1.1e-12 S Uncharacterized protein YkpC
PBIEDHHO_01501 7.7e-183 mreB D Rod-share determining protein MreBH
PBIEDHHO_01502 1e-44 abrB K of stationary sporulation gene expression
PBIEDHHO_01503 9.1e-237 kinC 2.7.13.3 T COG0642 Signal transduction histidine kinase
PBIEDHHO_01504 1.6e-146 ykqA P Gamma-glutamyl cyclotransferase, AIG2-like
PBIEDHHO_01505 2e-115 ktrA P COG0569 K transport systems, NAD-binding component
PBIEDHHO_01506 0.0 ade 3.5.4.2 F Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PBIEDHHO_01507 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PBIEDHHO_01508 5.3e-30 ykzG S Belongs to the UPF0356 family
PBIEDHHO_01509 2.5e-141 ykrA S hydrolases of the HAD superfamily
PBIEDHHO_01510 1.6e-97 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PBIEDHHO_01512 3e-66 recN L Putative cell-wall binding lipoprotein
PBIEDHHO_01513 3.8e-183 pdhA 1.2.4.1, 1.2.4.4 C COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PBIEDHHO_01514 1.2e-177 pdhB 1.2.4.1 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PBIEDHHO_01515 2.1e-225 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PBIEDHHO_01516 2.7e-242 lpdA 1.8.1.4 C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PBIEDHHO_01517 6.1e-45 slp CO COG0526, thiol-disulfide isomerase and thioredoxins
PBIEDHHO_01518 1.4e-126 pdaA_2 3.5.1.104 G Polysaccharide deacetylase
PBIEDHHO_01519 1.5e-272 speA 4.1.1.19 E Arginine
PBIEDHHO_01520 5.9e-42 yktA S Belongs to the UPF0223 family
PBIEDHHO_01521 1.8e-118 yktB S Belongs to the UPF0637 family
PBIEDHHO_01522 6.3e-24 ykzI
PBIEDHHO_01523 5.1e-150 suhB 3.1.3.25 G Inositol monophosphatase
PBIEDHHO_01524 1.6e-70 ykzC S Acetyltransferase (GNAT) family
PBIEDHHO_01525 5.1e-287 mpl 3.4.24.28, 3.4.24.29 E Peptidase M4
PBIEDHHO_01526 5.6e-26 ylaA
PBIEDHHO_01527 4.4e-14 sigC S Putative zinc-finger
PBIEDHHO_01528 5.9e-37 ylaE
PBIEDHHO_01529 6.7e-24 S Family of unknown function (DUF5325)
PBIEDHHO_01530 0.0 typA T GTP-binding protein TypA
PBIEDHHO_01531 6.6e-48 ylaH S YlaH-like protein
PBIEDHHO_01532 1.5e-32 ylaI S protein conserved in bacteria
PBIEDHHO_01533 4.7e-98 ylaJ S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PBIEDHHO_01534 7.8e-244 phoH T ATPase related to phosphate starvation-inducible protein PhoH
PBIEDHHO_01535 5.7e-80 ylaL S Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
PBIEDHHO_01536 1.4e-44 glsA 3.5.1.2 E Belongs to the glutaminase family
PBIEDHHO_01547 3e-10 K Cro/C1-type HTH DNA-binding domain
PBIEDHHO_01551 1.6e-22 K Helix-turn-helix domain
PBIEDHHO_01554 2e-37
PBIEDHHO_01555 2.4e-23
PBIEDHHO_01556 4.1e-182 I Pfam Lipase (class 3)
PBIEDHHO_01557 5.1e-28 S Protein of unknown function (DUF1433)
PBIEDHHO_01559 2.7e-160 S aspartate phosphatase
PBIEDHHO_01560 1.9e-22
PBIEDHHO_01561 0.0 S Pfam Transposase IS66
PBIEDHHO_01562 0.0 XK26_06135 M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
PBIEDHHO_01563 2.3e-192 S peptidoglycan catabolic process
PBIEDHHO_01564 8.1e-32 L GIY-YIG catalytic domain
PBIEDHHO_01565 4.8e-48 L Phage integrase, N-terminal SAM-like domain
PBIEDHHO_01566 2e-115 T Nacht domain
PBIEDHHO_01568 6.2e-08
PBIEDHHO_01569 1.1e-54
PBIEDHHO_01570 6.2e-10 S Phage uncharacterised protein (Phage_XkdX)
PBIEDHHO_01572 3.8e-49 S Domain of unknown function (DUF2479)
PBIEDHHO_01575 5.3e-189
PBIEDHHO_01577 5.8e-55
PBIEDHHO_01588 9.8e-74 L Recombinase zinc beta ribbon domain
PBIEDHHO_01589 4.3e-118 glsA 3.5.1.2 E Belongs to the glutaminase family
PBIEDHHO_01590 8.7e-44 ylaN S Belongs to the UPF0358 family
PBIEDHHO_01591 1.1e-209 ftsW D Belongs to the SEDS family
PBIEDHHO_01592 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PBIEDHHO_01593 2.5e-164 ctaA 2.5.1.141 O Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group
PBIEDHHO_01594 4.2e-164 ctaB 2.5.1.141 O Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
PBIEDHHO_01595 8.9e-190 ctaC 1.9.3.1 C Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)
PBIEDHHO_01596 0.0 ctaD 1.10.3.12, 1.9.3.1 C Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
PBIEDHHO_01597 1.5e-109 cyoC 1.10.3.12, 1.9.3.1 C COG1845 Heme copper-type cytochrome quinol oxidase, subunit 3
PBIEDHHO_01598 2.7e-52 ctaF 1.10.3.12, 1.9.3.1 C COG3125 Heme copper-type cytochrome quinol oxidase, subunit 4
PBIEDHHO_01599 1.9e-161 ctaG S cytochrome c oxidase
PBIEDHHO_01600 4.6e-58 ylbA S YugN-like family
PBIEDHHO_01601 1.2e-71 ylbB T COG0517 FOG CBS domain
PBIEDHHO_01602 3.2e-192 ylbC S protein with SCP PR1 domains
PBIEDHHO_01603 1.5e-52 ylbD S Putative coat protein
PBIEDHHO_01604 8.8e-37 ylbE S YlbE-like protein
PBIEDHHO_01605 2.5e-69 ylbF S Belongs to the UPF0342 family
PBIEDHHO_01606 1e-41 ylbG S UPF0298 protein
PBIEDHHO_01607 1.2e-97 rsmD 2.1.1.171 L Methyltransferase
PBIEDHHO_01608 2.1e-82 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PBIEDHHO_01609 5.2e-210 ylbJ S Sporulation integral membrane protein YlbJ
PBIEDHHO_01610 7.5e-138 ylbK S esterase of the alpha-beta hydrolase superfamily
PBIEDHHO_01611 2.6e-183 ylbL T Belongs to the peptidase S16 family
PBIEDHHO_01612 2.2e-220 ylbM S Belongs to the UPF0348 family
PBIEDHHO_01613 5.6e-89 yceD S metal-binding, possibly nucleic acid-binding protein
PBIEDHHO_01614 1.2e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PBIEDHHO_01615 5e-70 ylbO S SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
PBIEDHHO_01616 5.8e-88 ylbP K n-acetyltransferase
PBIEDHHO_01617 3.7e-152 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PBIEDHHO_01618 1.9e-300 bshC S Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
PBIEDHHO_01619 1.2e-77 mraZ K Belongs to the MraZ family
PBIEDHHO_01620 5.6e-172 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PBIEDHHO_01621 2.4e-51 ftsL D Essential cell division protein
PBIEDHHO_01622 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PBIEDHHO_01623 0.0 ftsI 3.4.16.4 M stage V sporulation protein D
PBIEDHHO_01624 9.8e-280 murE 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PBIEDHHO_01625 1.4e-170 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PBIEDHHO_01626 6.7e-251 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PBIEDHHO_01627 2.2e-185 spoVE D Belongs to the SEDS family
PBIEDHHO_01628 3.9e-201 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PBIEDHHO_01629 1.3e-165 murB 1.3.1.98 M cell wall formation
PBIEDHHO_01630 3.9e-126 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PBIEDHHO_01631 1.7e-227 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PBIEDHHO_01632 7.5e-203 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PBIEDHHO_01633 0.0 bpr O COG1404 Subtilisin-like serine proteases
PBIEDHHO_01634 7.8e-158 spoIIGA M aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR
PBIEDHHO_01635 1.2e-116 sigE K sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PBIEDHHO_01636 3.1e-139 sigG K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PBIEDHHO_01637 7.9e-143 modF 3.6.3.21, 3.6.3.34 P COG1119 ABC-type molybdenum transport system, ATPase component photorepair protein PhrA
PBIEDHHO_01638 7e-242 argE 3.5.1.16 E Acetylornithine deacetylase
PBIEDHHO_01639 2.2e-38 ylmC S sporulation protein
PBIEDHHO_01640 5.2e-153 yfiH S Belongs to the multicopper oxidase YfiH RL5 family
PBIEDHHO_01641 4.1e-119 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PBIEDHHO_01642 5.7e-61 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PBIEDHHO_01643 5.2e-41 yggT S membrane
PBIEDHHO_01644 6.3e-137 ylmH 5.4.99.23, 5.4.99.24 S conserved protein, contains S4-like domain
PBIEDHHO_01645 8.9e-68 divIVA D Cell division initiation protein
PBIEDHHO_01646 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PBIEDHHO_01647 3.8e-63 dksA T COG1734 DnaK suppressor protein
PBIEDHHO_01648 1.7e-76 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PBIEDHHO_01649 1.5e-161 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PBIEDHHO_01650 1e-93 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PBIEDHHO_01651 1.1e-229 pyrP F Xanthine uracil
PBIEDHHO_01652 1.7e-160 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PBIEDHHO_01653 2.2e-243 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PBIEDHHO_01654 3.7e-207 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PBIEDHHO_01655 0.0 carB 6.3.5.5 F Belongs to the CarB family
PBIEDHHO_01656 1.1e-138 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
PBIEDHHO_01657 1.6e-171 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PBIEDHHO_01658 1.7e-123 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PBIEDHHO_01659 6.1e-114 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PBIEDHHO_01660 6.1e-139 cysH 1.8.4.10, 1.8.4.8, 2.7.1.25 EH Belongs to the PAPS reductase family. CysH subfamily
PBIEDHHO_01661 8e-175 cysP P phosphate transporter
PBIEDHHO_01662 3.6e-221 sat 2.7.7.4 P Belongs to the sulfate adenylyltransferase family
PBIEDHHO_01663 2.1e-108 cysC 2.7.1.25 P Catalyzes the synthesis of activated sulfate
PBIEDHHO_01664 1.4e-139 hemD 2.1.1.107, 4.2.1.75 H Belongs to the precorrin methyltransferase family
PBIEDHHO_01665 3.2e-136 cbiX 4.99.1.3, 4.99.1.4, 5.4.99.60, 5.4.99.61 S Sirohydrochlorin ferrochelatase
PBIEDHHO_01666 4.3e-75 cysG 1.3.1.76, 4.99.1.4 H Siroheme synthase
PBIEDHHO_01667 7.4e-270 amyA 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
PBIEDHHO_01668 0.0 FbpA K RNA-binding protein homologous to eukaryotic snRNP
PBIEDHHO_01669 0.0 yloB 3.6.3.8 P COG0474 Cation transport ATPase
PBIEDHHO_01670 6.7e-151 yloC S stress-induced protein
PBIEDHHO_01671 1.5e-40 ylzA S Belongs to the UPF0296 family
PBIEDHHO_01672 1.2e-109 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
PBIEDHHO_01673 2.8e-28 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PBIEDHHO_01674 4.5e-222 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PBIEDHHO_01675 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PBIEDHHO_01676 4.7e-82 def 2.1.2.9, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PBIEDHHO_01677 6.4e-168 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PBIEDHHO_01678 4.9e-246 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PBIEDHHO_01679 7.6e-205 rlmN 2.1.1.192, 2.1.1.224 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PBIEDHHO_01680 3.5e-132 stp 3.1.3.16 T phosphatase
PBIEDHHO_01681 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
PBIEDHHO_01682 2.7e-163 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PBIEDHHO_01683 1.3e-114 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PBIEDHHO_01684 1.8e-113 thiN 2.7.6.2 H thiamine pyrophosphokinase
PBIEDHHO_01685 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PBIEDHHO_01686 6.1e-58 asp S protein conserved in bacteria
PBIEDHHO_01687 1.3e-299 yloV S kinase related to dihydroxyacetone kinase
PBIEDHHO_01688 4.8e-117 sdaAB 4.3.1.17 E L-serine dehydratase
PBIEDHHO_01689 3.9e-154 sdaAA 4.3.1.17 E L-serine dehydratase
PBIEDHHO_01690 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PBIEDHHO_01691 2.2e-91 fapR K Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism
PBIEDHHO_01692 2.3e-176 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PBIEDHHO_01693 1.9e-167 fabD 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
PBIEDHHO_01694 1.1e-127 IQ reductase
PBIEDHHO_01695 2.8e-32 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PBIEDHHO_01696 7.5e-135 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PBIEDHHO_01697 0.0 smc D Required for chromosome condensation and partitioning
PBIEDHHO_01698 5.9e-172 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PBIEDHHO_01699 4.3e-50 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PBIEDHHO_01700 9e-232 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PBIEDHHO_01701 1.4e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PBIEDHHO_01702 1.7e-35 ylqC S Belongs to the UPF0109 family
PBIEDHHO_01703 1.1e-60 ylqD S YlqD protein
PBIEDHHO_01704 2.1e-91 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PBIEDHHO_01705 1.9e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PBIEDHHO_01706 1.9e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PBIEDHHO_01707 5.5e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PBIEDHHO_01708 5.5e-125 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PBIEDHHO_01709 1.4e-266 ylqG
PBIEDHHO_01710 1.6e-42 ylqH S homolog of the cytoplasmic domain of flagellar protein FhlB
PBIEDHHO_01711 2.6e-211 sucC 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PBIEDHHO_01712 1.1e-167 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PBIEDHHO_01713 1.7e-162 dprA LU Rossmann fold nucleotide-binding protein involved in DNA uptake
PBIEDHHO_01714 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PBIEDHHO_01715 5.3e-245 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PBIEDHHO_01716 3.3e-169 xerC L tyrosine recombinase XerC
PBIEDHHO_01717 2.2e-91 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PBIEDHHO_01718 2e-229 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PBIEDHHO_01719 2e-135 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
PBIEDHHO_01720 7.8e-51 flgB N Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body
PBIEDHHO_01721 9.9e-74 flgC N Belongs to the flagella basal body rod proteins family
PBIEDHHO_01722 2.5e-31 fliE N Flagellar hook-basal body
PBIEDHHO_01723 2.7e-251 fliF N The M ring may be actively involved in energy transduction
PBIEDHHO_01724 1.7e-177 fliG N One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
PBIEDHHO_01725 1.4e-85 fliH NU COG1317 Flagellar biosynthesis type III secretory pathway protein
PBIEDHHO_01726 2.7e-241 fliI 3.6.3.14 NU COG1157 Flagellar biosynthesis type III secretory pathway ATPase
PBIEDHHO_01727 4.5e-71 fliJ N Flagellar biosynthesis chaperone
PBIEDHHO_01728 1.2e-37 ylxF S MgtE intracellular N domain
PBIEDHHO_01729 5.5e-189 fliK N Flagellar hook-length control protein
PBIEDHHO_01730 2.7e-68 flgD N Flagellar basal body rod modification protein
PBIEDHHO_01731 5.4e-136 flgG N Flagellar basal body rod
PBIEDHHO_01732 5.1e-56 fliL N Controls the rotational direction of flagella during chemotaxis
PBIEDHHO_01733 7.8e-180 fliM N One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
PBIEDHHO_01734 3.8e-175 fliN N FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
PBIEDHHO_01735 1.2e-58 cheB 3.1.1.61, 3.5.1.44 T response regulator
PBIEDHHO_01736 3.3e-110 fliZ N Flagellar biosynthesis protein, FliO
PBIEDHHO_01737 3.7e-109 fliP N Plays a role in the flagellum-specific transport system
PBIEDHHO_01738 7.5e-37 fliQ N Role in flagellar biosynthesis
PBIEDHHO_01739 3.2e-128 fliR N Flagellar biosynthetic protein FliR
PBIEDHHO_01740 1.1e-187 flhB N Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PBIEDHHO_01741 0.0 flhA N Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PBIEDHHO_01742 2.9e-156 flhF N Flagellar biosynthesis regulator FlhF
PBIEDHHO_01743 4.3e-153 flhG D Belongs to the ParA family
PBIEDHHO_01744 4.9e-188 cheB 3.1.1.61, 3.5.1.44 NT catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
PBIEDHHO_01745 0.0 cheA 2.7.13.3 NT COG0643 Chemotaxis protein histidine kinase and related kinases
PBIEDHHO_01746 2.5e-80 cheW NT COG0835 Chemotaxis signal transduction protein
PBIEDHHO_01747 7e-110 cheC NT COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation
PBIEDHHO_01748 4.3e-86 cheD 3.5.1.44 NT Deamidates glutamine residues to glutamate on methyl- accepting chemotaxis receptors (MCPs). CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the CheA kinase
PBIEDHHO_01749 3.9e-139 sigD K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PBIEDHHO_01750 1.7e-47 ylxL
PBIEDHHO_01751 3.8e-131 rpsB J Belongs to the universal ribosomal protein uS2 family
PBIEDHHO_01752 1.2e-155 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PBIEDHHO_01753 1.6e-126 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PBIEDHHO_01754 2.1e-89 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PBIEDHHO_01755 1.3e-142 uppS 2.5.1.31 I Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PBIEDHHO_01756 8.4e-137 cdsA 2.7.7.41 S Belongs to the CDS family
PBIEDHHO_01757 2.3e-212 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PBIEDHHO_01758 4.2e-231 rasP M zinc metalloprotease
PBIEDHHO_01759 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PBIEDHHO_01760 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PBIEDHHO_01761 1.9e-80 rimP S Required for maturation of 30S ribosomal subunits
PBIEDHHO_01762 3.5e-205 nusA K Participates in both transcription termination and antitermination
PBIEDHHO_01763 1.7e-36 ylxR K nucleic-acid-binding protein implicated in transcription termination
PBIEDHHO_01764 1.8e-47 ylxQ J ribosomal protein
PBIEDHHO_01765 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PBIEDHHO_01766 8.6e-44 ylxP S protein conserved in bacteria
PBIEDHHO_01767 3.7e-51 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PBIEDHHO_01768 2.4e-167 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PBIEDHHO_01769 1.9e-175 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PBIEDHHO_01770 1e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PBIEDHHO_01771 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PBIEDHHO_01772 1.4e-178 ylxY 3.5.1.104 G Sporulation protein, polysaccharide deacetylase
PBIEDHHO_01773 2e-233 pepR S Belongs to the peptidase M16 family
PBIEDHHO_01774 2.6e-42 ymxH S YlmC YmxH family
PBIEDHHO_01775 9.8e-158 spoVFA 1.1.1.29, 1.1.1.399, 1.1.1.95 CH Dipicolinate synthase subunit A
PBIEDHHO_01776 4.3e-101 spoVFB H Together with DpaA, catalyzes the conversion of dihydrodipicolinate to dipicolinate (DPA)
PBIEDHHO_01777 1.1e-189 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PBIEDHHO_01778 7.4e-217 dapG 1.1.1.3, 2.7.2.4 E Belongs to the aspartokinase family
PBIEDHHO_01779 6.2e-157 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PBIEDHHO_01780 4.7e-302 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PBIEDHHO_01781 6.6e-128 tepA 3.4.21.92 OU COG0740 Protease subunit of ATP-dependent Clp proteases
PBIEDHHO_01782 2.6e-29 S YlzJ-like protein
PBIEDHHO_01783 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PBIEDHHO_01784 2e-129 ymfC K Transcriptional regulator
PBIEDHHO_01785 6.2e-225 ymfD EGP Major facilitator Superfamily
PBIEDHHO_01786 5.8e-74 K helix_turn_helix multiple antibiotic resistance protein
PBIEDHHO_01787 0.0 ydgH S drug exporters of the RND superfamily
PBIEDHHO_01788 7e-234 ymfF S Peptidase M16
PBIEDHHO_01789 7.3e-239 ymfH S zinc protease
PBIEDHHO_01790 8.1e-126 ymfI 1.1.1.100, 1.3.1.28 S Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
PBIEDHHO_01791 9.7e-42 ymfJ S Protein of unknown function (DUF3243)
PBIEDHHO_01792 5.1e-142 ymfK S Protein of unknown function (DUF3388)
PBIEDHHO_01793 6.4e-117 ymfM S protein conserved in bacteria
PBIEDHHO_01794 4.2e-101 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PBIEDHHO_01795 2.1e-230 cinA 3.5.1.42 S Belongs to the CinA family
PBIEDHHO_01796 7.6e-186 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PBIEDHHO_01797 2.4e-180 pbpX V Beta-lactamase
PBIEDHHO_01798 4.2e-241 rny S Endoribonuclease that initiates mRNA decay
PBIEDHHO_01799 1.9e-152 ymdB S protein conserved in bacteria
PBIEDHHO_01800 1.2e-36 spoVS S Stage V sporulation protein S
PBIEDHHO_01801 3.1e-195 tdh 1.1.1.103 C Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate
PBIEDHHO_01802 7e-212 kbl 2.3.1.29, 2.3.1.47 H Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
PBIEDHHO_01803 6.5e-295 miaB 2.8.4.3 J Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PBIEDHHO_01804 1.2e-65 ymcA 3.6.3.21 S Belongs to the UPF0342 family
PBIEDHHO_01805 2.1e-86 cotE S Spore coat protein
PBIEDHHO_01806 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PBIEDHHO_01807 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PBIEDHHO_01808 2.9e-125 pksB 3.1.2.6 S Polyketide biosynthesis
PBIEDHHO_01809 8.6e-159 fabD 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
PBIEDHHO_01810 6.9e-173 pksD Q Acyl transferase domain
PBIEDHHO_01811 0.0 fabD 1.13.12.16, 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
PBIEDHHO_01812 8.5e-35 acpK IQ Phosphopantetheine attachment site
PBIEDHHO_01813 1.5e-241 pksG 2.3.3.10 I synthase
PBIEDHHO_01814 8.8e-139 pksH 4.2.1.18 I enoyl-CoA hydratase
PBIEDHHO_01815 6.8e-136 pksI I Belongs to the enoyl-CoA hydratase isomerase family
PBIEDHHO_01816 0.0 rhiB IQ polyketide synthase
PBIEDHHO_01817 0.0 Q Polyketide synthase of type I
PBIEDHHO_01818 0.0 pfaA 4.1.1.35 GT4 Q Polyketide synthase of type I
PBIEDHHO_01819 0.0 dhbF IQ polyketide synthase
PBIEDHHO_01820 0.0 pks13 HQ Beta-ketoacyl synthase
PBIEDHHO_01821 1.4e-223 cypA C Cytochrome P450
PBIEDHHO_01822 5.2e-72 nucB M Deoxyribonuclease NucA/NucB
PBIEDHHO_01823 3.4e-116 yoaK S Membrane
PBIEDHHO_01824 1.6e-61 ymzB
PBIEDHHO_01825 3.1e-248 aprX O Belongs to the peptidase S8 family
PBIEDHHO_01827 1e-117 ymaC S Replication protein
PBIEDHHO_01828 1.4e-75 ymaD O redox protein, regulator of disulfide bond formation
PBIEDHHO_01829 9.8e-53 ebrB P Small Multidrug Resistance protein
PBIEDHHO_01830 2.5e-47 ebrA P Small Multidrug Resistance protein
PBIEDHHO_01832 1.4e-42 ymaF S YmaF family
PBIEDHHO_01833 6.7e-165 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PBIEDHHO_01834 1.1e-33 hfq J RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs
PBIEDHHO_01835 2.6e-40
PBIEDHHO_01836 7.9e-21 ymzA
PBIEDHHO_01837 2.3e-58 nrdI 1.17.4.1 F Probably involved in ribonucleotide reductase function
PBIEDHHO_01838 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PBIEDHHO_01839 2.6e-183 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PBIEDHHO_01840 1.3e-103 ymaB S MutT family
PBIEDHHO_01842 4.1e-88 cwlC 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
PBIEDHHO_01843 8.6e-176 spoVK O stage V sporulation protein K
PBIEDHHO_01844 8.2e-227 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PBIEDHHO_01845 5e-240 ynbB 4.4.1.1 P COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance
PBIEDHHO_01846 8.8e-66 glnR K transcriptional
PBIEDHHO_01847 1.2e-260 glnA 6.3.1.2 E glutamine synthetase
PBIEDHHO_01850 1.3e-12
PBIEDHHO_01851 3.9e-116 xlnB 3.2.1.8 G Glycosyl hydrolases family 11
PBIEDHHO_01852 5.6e-212 cypA C Cytochrome P450
PBIEDHHO_01853 5.1e-246 xynT G MFS/sugar transport protein
PBIEDHHO_01854 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
PBIEDHHO_01855 9.6e-206 xylR GK ROK family
PBIEDHHO_01856 2.2e-254 xylA 5.3.1.5 G Belongs to the xylose isomerase family
PBIEDHHO_01857 1.8e-273 xylB 2.7.1.12, 2.7.1.17, 2.7.1.5 G xylulose kinase
PBIEDHHO_01858 1.5e-116 3.2.1.8 G Glycosyl hydrolases family 11
PBIEDHHO_01859 0.0 pps 2.7.9.2 GT phosphoenolpyruvate synthase
PBIEDHHO_01860 1.3e-88 K Transcriptional regulator, TetR family
PBIEDHHO_01861 2.2e-177 bdhA 1.1.1.303, 1.1.1.4 E Dehydrogenase
PBIEDHHO_01863 2.5e-195 S aspartate phosphatase
PBIEDHHO_01866 1.7e-66 S DinB family
PBIEDHHO_01867 8.5e-182 adhP 1.1.1.1 C alcohol dehydrogenase
PBIEDHHO_01868 4e-11
PBIEDHHO_01870 2.9e-26 S Protein of unknown function (DUF4025)
PBIEDHHO_01871 1.1e-10 ywlA S Uncharacterised protein family (UPF0715)
PBIEDHHO_01872 1.1e-128 yoaP 3.1.3.18 K YoaP-like
PBIEDHHO_01873 1.1e-90 J Acetyltransferase (GNAT) domain
PBIEDHHO_01875 1.4e-34
PBIEDHHO_01877 6.6e-100 ynaE S Domain of unknown function (DUF3885)
PBIEDHHO_01878 1.4e-187 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PBIEDHHO_01879 1.1e-115 AA10,CBM73 S Pfam:Chitin_bind_3
PBIEDHHO_01881 3.3e-84 yvgO
PBIEDHHO_01883 0.0 yobO M Pectate lyase superfamily protein
PBIEDHHO_01884 1.3e-32 S TM2 domain
PBIEDHHO_01885 1.7e-75 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F Deoxyuridine 5'-triphosphate
PBIEDHHO_01886 3.9e-24 S Domain of unknown function (DUF4177)
PBIEDHHO_01887 9.7e-128 yndL S Replication protein
PBIEDHHO_01889 2e-136 O COG0330 Membrane protease subunits, stomatin prohibitin homologs
PBIEDHHO_01890 5.8e-66 yndM S Protein of unknown function (DUF2512)
PBIEDHHO_01891 1.3e-11 yoaW
PBIEDHHO_01892 9e-110 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PBIEDHHO_01893 1.2e-49 yneA D Inhibits cell division during the SOS response. Affects a later stage of the cell division protein assembly, after the assembly of the Z ring, by probably suppressing recruitment of FtsL and or DivIC to the division machinery
PBIEDHHO_01894 1.6e-109 yneB L resolvase
PBIEDHHO_01895 9.8e-33 ynzC S UPF0291 protein
PBIEDHHO_01896 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PBIEDHHO_01897 7.7e-79 yneE S Sporulation inhibitor of replication protein sirA
PBIEDHHO_01898 2.3e-28 yneF S UPF0154 protein
PBIEDHHO_01899 8.9e-23 ynzD S Spo0E like sporulation regulatory protein
PBIEDHHO_01900 1.2e-121 ccdA O cytochrome c biogenesis protein
PBIEDHHO_01901 1.2e-56 cheB 3.1.1.61, 3.5.1.44 T cheY-homologous receiver domain
PBIEDHHO_01902 5.6e-75 yneJ O COG4846 Membrane protein involved in cytochrome C biogenesis
PBIEDHHO_01903 2.8e-70 yneK S Protein of unknown function (DUF2621)
PBIEDHHO_01904 5.7e-59 hspX O Spore coat protein
PBIEDHHO_01905 2.3e-19 sspP S Belongs to the SspP family
PBIEDHHO_01906 7.5e-15 sspO S Belongs to the SspO family
PBIEDHHO_01907 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PBIEDHHO_01908 3.6e-88 yneN CO alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
PBIEDHHO_01910 1.1e-31 tlp S Belongs to the Tlp family
PBIEDHHO_01911 7.7e-73 yneP S Thioesterase-like superfamily
PBIEDHHO_01912 1.9e-49 yneQ
PBIEDHHO_01913 3.4e-43 yneR S Belongs to the HesB IscA family
PBIEDHHO_01914 4.2e-93 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PBIEDHHO_01915 3.3e-68 yccU S CoA-binding protein
PBIEDHHO_01916 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PBIEDHHO_01917 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PBIEDHHO_01918 4.6e-13
PBIEDHHO_01919 1.2e-39 ynfC
PBIEDHHO_01920 4e-246 agcS E Sodium alanine symporter
PBIEDHHO_01921 5.2e-22 yndG S DoxX-like family
PBIEDHHO_01922 2e-77 yndH S Domain of unknown function (DUF4166)
PBIEDHHO_01923 4.6e-275 yndJ S YndJ-like protein
PBIEDHHO_01924 1.2e-49 S Domain of unknown function (DUF4870)
PBIEDHHO_01925 3.2e-216 T PhoQ Sensor
PBIEDHHO_01926 9e-122 T Transcriptional regulatory protein, C terminal
PBIEDHHO_01927 5.5e-239 xynC 3.2.1.136 GH5 M Belongs to the glycosyl hydrolase 30 family
PBIEDHHO_01928 1.5e-278 xynD3 3.2.1.55 CBM6,GH43 G Belongs to the glycosyl hydrolase 43 family
PBIEDHHO_01929 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PBIEDHHO_01930 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PBIEDHHO_01931 0.0 nrsA Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PBIEDHHO_01932 4.5e-206 fabD 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
PBIEDHHO_01933 2e-122 IQ Catalyzes the formation of acetoacetate from 3-hydroxybutyrate
PBIEDHHO_01934 1.1e-105 scoB 2.8.3.5 I COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
PBIEDHHO_01935 2.3e-114 scoA 2.8.3.5 I COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
PBIEDHHO_01936 2.5e-164 bioI 1.14.14.46 C Cytochrome P450
PBIEDHHO_01937 8.5e-190 bioB 2.8.1.6 H Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
PBIEDHHO_01938 4e-122 bioD 6.3.3.3 H Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
PBIEDHHO_01939 3.9e-199 bioF 2.3.1.29, 2.3.1.47, 6.2.1.14 H Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
PBIEDHHO_01940 1.6e-252 bioA 2.6.1.105, 2.6.1.62 H Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor
PBIEDHHO_01941 8.5e-134 bioW 2.3.1.47, 6.2.1.14 H Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP
PBIEDHHO_01942 1.6e-67 yngA S membrane
PBIEDHHO_01943 8.6e-154 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PBIEDHHO_01944 1.6e-103 yngC S SNARE associated Golgi protein
PBIEDHHO_01945 1.1e-286 yngE 2.1.3.15, 6.4.1.3 I COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PBIEDHHO_01946 5.6e-133 yngF 4.2.1.17 I Belongs to the enoyl-CoA hydratase isomerase family
PBIEDHHO_01947 1.6e-163 mvaB 4.1.3.4, 6.4.1.4 E Hydroxymethylglutaryl-CoA lyase
PBIEDHHO_01948 1.2e-29 pycB 2.3.1.12, 6.4.1.1 I Biotin carboxyl carrier protein
PBIEDHHO_01949 9e-240 yngH 6.3.4.14, 6.4.1.2, 6.4.1.3, 6.4.1.4 I Biotin carboxylase
PBIEDHHO_01950 5.9e-310 yngI IQ COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
PBIEDHHO_01951 5e-207 yngJ 1.3.8.1, 1.3.99.12 I acyl-CoA dehydrogenase
PBIEDHHO_01952 5.6e-294 yngK T Glycosyl hydrolase-like 10
PBIEDHHO_01953 5.1e-63 yngL S Protein of unknown function (DUF1360)
PBIEDHHO_01954 0.0 Q D-alanine [D-alanyl carrier protein] ligase activity
PBIEDHHO_01955 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PBIEDHHO_01956 3.1e-257 dacC 3.4.16.4 M D-alanyl-D-alanine carboxypeptidase
PBIEDHHO_01957 3.4e-180 yoxA 5.1.3.3 G Aldose 1-epimerase
PBIEDHHO_01958 3.8e-241 yoeA V MATE efflux family protein
PBIEDHHO_01959 1.6e-94 yoeB S IseA DL-endopeptidase inhibitor
PBIEDHHO_01961 1.9e-95 L Integrase
PBIEDHHO_01962 1.1e-33 yoeD G Helix-turn-helix domain
PBIEDHHO_01963 0.0 ggt 2.3.2.2, 3.4.19.13 E gamma-glutamyltransferase
PBIEDHHO_01964 1.2e-190 ybcL EGP Major facilitator Superfamily
PBIEDHHO_01965 6.7e-50 ybzH K Helix-turn-helix domain
PBIEDHHO_01966 1.5e-225 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PBIEDHHO_01967 4.4e-30 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PBIEDHHO_01968 3.6e-290 gltD 1.4.1.13, 1.4.1.14 E COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases
PBIEDHHO_01969 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase
PBIEDHHO_01970 3.6e-147 gltC K Transcriptional regulator
PBIEDHHO_01971 5.1e-196 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PBIEDHHO_01972 6.1e-135 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PBIEDHHO_01973 3.6e-61 rtp K Plays a role in DNA replication and termination (fork arrest mechanism). Two dimers of rtp bind to the two inverted repeat regions (IRI and IRII) present in the termination site. The binding of each dimer is centered on an 8 bp direct repeat
PBIEDHHO_01974 6.9e-122 fabG 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PBIEDHHO_01975 1.3e-37 yoxC S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PBIEDHHO_01976 1.7e-115 yoxB
PBIEDHHO_01977 2.5e-92 S Protein of unknown function (DUF421)
PBIEDHHO_01978 2.7e-285 clsA_1 I PLD-like domain
PBIEDHHO_01979 1.2e-70 S Protein of unknown function (DUF421)
PBIEDHHO_01980 1.4e-148 yetF1 S membrane
PBIEDHHO_01981 5.8e-29 S Protein of unknown function (DUF1657)
PBIEDHHO_01982 8.5e-57 spoVAE S stage V sporulation protein
PBIEDHHO_01983 1e-195 spoVAD I Stage V sporulation protein AD
PBIEDHHO_01984 2.6e-80 spoVAC S stage V sporulation protein AC
PBIEDHHO_01985 4.1e-78 S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PBIEDHHO_01986 6e-26 S Protein of unknown function (DUF1657)
PBIEDHHO_01988 1.3e-78
PBIEDHHO_01989 7.1e-85 L resolvase
PBIEDHHO_01990 0.0 L Transposase and inactivated derivatives, TnpA family
PBIEDHHO_01991 2.3e-194 yoaB EGP Major facilitator Superfamily
PBIEDHHO_01992 1.2e-264 yoaC 2.7.1.12, 2.7.1.17, 2.7.1.189 G FGGY family of carbohydrate kinases, C-terminal domain
PBIEDHHO_01993 1.5e-186 yoaD 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PBIEDHHO_01994 1.8e-19 yoaE C belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PBIEDHHO_01995 0.0 yoaE C belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PBIEDHHO_01996 5.7e-27 yoaF
PBIEDHHO_01998 1.1e-93 hpr K helix_turn_helix multiple antibiotic resistance protein
PBIEDHHO_01999 1.1e-28
PBIEDHHO_02002 4.6e-52 csaA 6.1.1.10, 6.1.1.20, 6.1.1.6 J tRNA-binding protein
PBIEDHHO_02003 3.4e-121 yobQ K helix_turn_helix, arabinose operon control protein
PBIEDHHO_02004 7e-85 yobS K Transcriptional regulator
PBIEDHHO_02005 8.8e-125 yobT S COG0491 Zn-dependent hydrolases, including glyoxylases
PBIEDHHO_02006 3.1e-44 yobW
PBIEDHHO_02007 7.6e-55 czrA K transcriptional
PBIEDHHO_02008 3.3e-118 pvaA M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
PBIEDHHO_02009 1.4e-90 yozB S membrane
PBIEDHHO_02010 1.3e-134 yocB J Protein required for attachment to host cells
PBIEDHHO_02011 3.4e-91 yocC
PBIEDHHO_02012 5.8e-180 yocD 3.4.17.13 V peptidase S66
PBIEDHHO_02014 2.1e-112 yocH CBM50 M COG1388 FOG LysM repeat
PBIEDHHO_02015 0.0 recQ 3.6.4.12 L DNA helicase
PBIEDHHO_02017 1.1e-110 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PBIEDHHO_02018 2e-56 dksA T general stress protein
PBIEDHHO_02019 6.3e-10 yocL
PBIEDHHO_02020 9.8e-09
PBIEDHHO_02021 3.7e-87 yocM O Belongs to the small heat shock protein (HSP20) family
PBIEDHHO_02022 2e-29 yozN
PBIEDHHO_02023 2.5e-36 yocN
PBIEDHHO_02024 2.4e-56 yozO S Bacterial PH domain
PBIEDHHO_02025 1.6e-31 yozC
PBIEDHHO_02026 5.1e-284 dhaS 1.2.1.3, 1.2.1.39 C Belongs to the aldehyde dehydrogenase family
PBIEDHHO_02027 0.0 sqhC 4.2.1.137, 5.4.99.7 I COG1657 Squalene cyclase
PBIEDHHO_02028 8.1e-162 sodA 1.15.1.1 P Superoxide dismutase
PBIEDHHO_02029 7.1e-229 yocR S Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
PBIEDHHO_02030 3.6e-158 yocS S -transporter
PBIEDHHO_02031 1.4e-128 S Metallo-beta-lactamase superfamily
PBIEDHHO_02032 2.9e-184 sucB 2.3.1.61 C The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2)
PBIEDHHO_02033 0.0 sucA 1.2.4.2, 4.1.1.71 C The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components 2- oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3)
PBIEDHHO_02034 0.0 yojO P Von Willebrand factor
PBIEDHHO_02035 6.5e-162 yojN S ATPase family associated with various cellular activities (AAA)
PBIEDHHO_02036 1.8e-99 sodC 1.15.1.1 P Destroys radicals which are normally produced within the cells and which are toxic to biological systems
PBIEDHHO_02037 2.1e-214 sle1 3.5.1.28 CBM50 M COG1388 FOG LysM repeat
PBIEDHHO_02038 5.1e-218 yojK CG UDP-glucoronosyl and UDP-glucosyl transferase
PBIEDHHO_02039 2.3e-105 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PBIEDHHO_02041 1.1e-232 norM V Multidrug efflux pump
PBIEDHHO_02042 6.2e-146 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PBIEDHHO_02043 9.6e-126 yojG S deacetylase
PBIEDHHO_02044 3.7e-60 yojF S Protein of unknown function (DUF1806)
PBIEDHHO_02045 6.4e-23
PBIEDHHO_02046 2.6e-158 rarD S -transporter
PBIEDHHO_02047 8.9e-78 yozR S COG0071 Molecular chaperone (small heat shock protein)
PBIEDHHO_02049 6.8e-63 yodA S tautomerase
PBIEDHHO_02050 3.5e-52 yodB K transcriptional
PBIEDHHO_02051 5.5e-104 yodC C nitroreductase
PBIEDHHO_02052 5.3e-107 mhqD S Carboxylesterase
PBIEDHHO_02053 2.2e-168 yodE E COG0346 Lactoylglutathione lyase and related lyases
PBIEDHHO_02054 3.1e-19 S Protein of unknown function (DUF3311)
PBIEDHHO_02055 3.2e-262 yodF E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PBIEDHHO_02056 4.3e-267 3.2.1.45 GH30 M Glycosyl hydrolase family 30 beta sandwich domain
PBIEDHHO_02057 1.6e-282 bglA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PBIEDHHO_02058 3.8e-128 yydK K Transcriptional regulator
PBIEDHHO_02059 5.5e-248 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
PBIEDHHO_02060 2.2e-120 yodH Q Methyltransferase
PBIEDHHO_02061 1e-19 yodI
PBIEDHHO_02062 7.6e-141 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
PBIEDHHO_02063 7.7e-126 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
PBIEDHHO_02065 3.3e-55 yodL S YodL-like
PBIEDHHO_02066 4.4e-101 yodM 3.6.1.27 I Acid phosphatase homologues
PBIEDHHO_02067 1.8e-23 yozD S YozD-like protein
PBIEDHHO_02069 5.6e-121 yodN
PBIEDHHO_02070 6.1e-51 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PBIEDHHO_02071 3.4e-35 yozE S Belongs to the UPF0346 family
PBIEDHHO_02072 1.1e-43 yokU S YokU-like protein, putative antitoxin
PBIEDHHO_02073 1.2e-274 kamA 5.4.3.2 E lysine 2,3-aminomutase
PBIEDHHO_02074 1.4e-140 yodP 2.3.1.264 K Acetyltransferase (GNAT) family
PBIEDHHO_02075 1.6e-249 yodQ 3.5.1.16 E Acetylornithine deacetylase
PBIEDHHO_02076 2.7e-118 scoB 2.8.3.5, 2.8.3.8, 2.8.3.9 I COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
PBIEDHHO_02077 4.3e-121 yodS 2.8.3.8, 2.8.3.9 I COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
PBIEDHHO_02078 1e-235 yodT H Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PBIEDHHO_02080 2.4e-64 yosT L Bacterial transcription activator, effector binding domain
PBIEDHHO_02082 1.3e-137 yiiD K acetyltransferase
PBIEDHHO_02083 1.1e-226 cgeD M maturation of the outermost layer of the spore
PBIEDHHO_02084 1.3e-34 cgeC
PBIEDHHO_02085 6.2e-49 cgeA
PBIEDHHO_02086 2.9e-168 cgeB S Spore maturation protein
PBIEDHHO_02087 1.3e-210 phy 3.1.3.8 I Myo-inositol-hexaphosphate 3-phosphohydrolase
PBIEDHHO_02088 1.2e-69 4.2.1.115 GM Polysaccharide biosynthesis protein
PBIEDHHO_02091 1.9e-121 lldD 1.13.12.4 C FMN-dependent dehydrogenase
PBIEDHHO_02093 1.9e-13 S Regulatory protein YrvL
PBIEDHHO_02094 6.4e-211 yokA L Recombinase
PBIEDHHO_02095 1.2e-100 4.2.1.115 GM Polysaccharide biosynthesis protein
PBIEDHHO_02096 6.4e-78 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PBIEDHHO_02097 4.3e-100 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PBIEDHHO_02098 8.9e-66 ypoP K transcriptional
PBIEDHHO_02099 1.7e-94 ypmS S protein conserved in bacteria
PBIEDHHO_02100 9.5e-130 ypmR E GDSL-like Lipase/Acylhydrolase
PBIEDHHO_02101 2e-103 ypmQ S protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems
PBIEDHHO_02102 7.5e-39 ypmP S Protein of unknown function (DUF2535)
PBIEDHHO_02103 1.3e-240 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PBIEDHHO_02104 3.8e-163 pspF K Transcriptional regulator
PBIEDHHO_02105 6.6e-108 hlyIII S protein, Hemolysin III
PBIEDHHO_02106 1.7e-108 ypkP 2.3.1.40, 2.3.1.51, 6.2.1.20 I Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
PBIEDHHO_02107 7.8e-85 folA 1.1.1.262, 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PBIEDHHO_02108 2.8e-156 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PBIEDHHO_02109 3e-110 ypjP S YpjP-like protein
PBIEDHHO_02110 2.9e-126 ypiP 2.1.1.242 AJ Putative SAM-dependent methyltransferase
PBIEDHHO_02111 1.7e-75 yphP S Belongs to the UPF0403 family
PBIEDHHO_02112 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
PBIEDHHO_02113 6e-152 ypgR C COG0694 Thioredoxin-like proteins and domains
PBIEDHHO_02114 2.3e-89 ypgQ S phosphohydrolase
PBIEDHHO_02115 2.1e-82 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
PBIEDHHO_02117 2.8e-176 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PBIEDHHO_02118 1.4e-212 ugtP 2.4.1.315 GT28 M Processive glucosyltransferase involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. Is able to successively transfer up to three glucosyl residues to diacylglycerol (DAG), thereby catalyzing the formation of beta-monoglucosyl-DAG (3-O-(beta-D-glucopyranosyl)-1,2-diacyl- sn-glycerol), beta-diglucosyl-DAG (3-O-(beta-D-glucopyranosyl- beta-(1- 6)-D-glucopyranosyl)-1,2-diacyl-sn-glycerol) and beta- triglucosyl-DAG (3-O-(beta-D-glucopyranosyl-beta-(1- 6)-D- glucopyranosyl-beta-(1- 6)-D-glucopyranosyl)-1,2-diacyl-sn- glycerol). Beta-diglucosyl-DAG is the predominant glycolipid found in Bacillales and is also used as a membrane anchor for lipoteichoic acid (LTA)
PBIEDHHO_02119 1e-30 cspD K Cold-shock protein
PBIEDHHO_02120 6.3e-11 degR
PBIEDHHO_02121 2.3e-35 S Protein of unknown function (DUF2564)
PBIEDHHO_02122 3.7e-27 ypeQ S Zinc-finger
PBIEDHHO_02123 2e-118 ypeP 3.1.26.4 L COG0328 Ribonuclease HI
PBIEDHHO_02124 5.2e-119 ypdP S Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
PBIEDHHO_02125 7.1e-68 rnhA 3.1.26.4 L Ribonuclease
PBIEDHHO_02127 8e-160 polA 2.7.7.7 L 5'3' exonuclease
PBIEDHHO_02129 3.7e-33 ypbS S Protein of unknown function (DUF2533)
PBIEDHHO_02130 0.0 ypbR S Dynamin family
PBIEDHHO_02131 4.8e-85 ypbQ S protein conserved in bacteria
PBIEDHHO_02132 1.2e-194 bcsA Q Naringenin-chalcone synthase
PBIEDHHO_02133 2e-101 J Acetyltransferase (GNAT) domain
PBIEDHHO_02134 6.6e-45 ybaZ 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
PBIEDHHO_02135 2.4e-07 S Bacillus cereus group antimicrobial protein
PBIEDHHO_02136 4.4e-158 pbuX F xanthine
PBIEDHHO_02138 4.2e-90 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PBIEDHHO_02145 3.7e-151 S Calcineurin-like phosphoesterase
PBIEDHHO_02146 1.1e-22 sspB S spore protein
PBIEDHHO_02149 4.7e-19
PBIEDHHO_02150 3e-32
PBIEDHHO_02155 5.4e-28 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PBIEDHHO_02156 6.4e-151 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PBIEDHHO_02157 3.5e-50 S Protein of unknown function (DUF1643)
PBIEDHHO_02162 1.8e-72 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F Deoxyuridine 5'-triphosphate
PBIEDHHO_02163 1.4e-08
PBIEDHHO_02164 5.7e-36 O Glutaredoxin
PBIEDHHO_02165 3.2e-21
PBIEDHHO_02166 1.6e-150 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PBIEDHHO_02168 1.3e-171 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PBIEDHHO_02169 7.2e-59 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PBIEDHHO_02170 1.2e-31 L GIY-YIG catalytic domain
PBIEDHHO_02171 2.6e-49 S HNH endonuclease
PBIEDHHO_02172 3.8e-120 S ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
PBIEDHHO_02173 2e-62 S NrdI Flavodoxin like
PBIEDHHO_02176 5.8e-12 larC 4.99.1.12 FJ Protein conserved in bacteria
PBIEDHHO_02190 3.1e-164 dcm 2.1.1.37 L DNA (cytosine-5-)-methyltransferase activity
PBIEDHHO_02191 1e-55 2.1.1.113, 2.1.1.72 L N-4 methylation of cytosine
PBIEDHHO_02193 5.6e-89 yorS 3.1.3.5 S 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
PBIEDHHO_02194 4.1e-71 tmk 2.1.1.45, 2.7.4.9 F dTDP biosynthetic process
PBIEDHHO_02197 5.1e-24 S protein conserved in bacteria
PBIEDHHO_02198 0.0 S Bacterial DNA polymerase III alpha subunit
PBIEDHHO_02199 4.6e-305 recJ L Single-stranded-DNA-specific exonuclease RecJ
PBIEDHHO_02200 1.5e-203 L DNA primase activity
PBIEDHHO_02201 9.1e-273 3.6.4.12 J DnaB-like helicase C terminal domain
PBIEDHHO_02202 7.4e-80
PBIEDHHO_02203 6.2e-174 L AAA domain
PBIEDHHO_02204 1.9e-156
PBIEDHHO_02208 2.4e-221 M Parallel beta-helix repeats
PBIEDHHO_02209 9.2e-86 S Pfam:DUF867
PBIEDHHO_02212 1.6e-160
PBIEDHHO_02213 1.8e-09 S YopX protein
PBIEDHHO_02216 2.6e-126 yoqW S Belongs to the SOS response-associated peptidase family
PBIEDHHO_02217 3.2e-139 ligB 6.5.1.1, 6.5.1.6, 6.5.1.7 L ATP-dependent DNA ligase
PBIEDHHO_02224 1.4e-16
PBIEDHHO_02229 2.8e-24
PBIEDHHO_02232 3.5e-43
PBIEDHHO_02234 6.7e-74 U Protein of unknown function DUF262
PBIEDHHO_02236 6.9e-10 S YopX protein
PBIEDHHO_02237 1.6e-42
PBIEDHHO_02241 2.4e-12 K Transcriptional regulator
PBIEDHHO_02242 8.3e-33
PBIEDHHO_02243 1.5e-189
PBIEDHHO_02244 9.2e-38 L Belongs to the 'phage' integrase family
PBIEDHHO_02250 1.5e-78
PBIEDHHO_02251 9.3e-46
PBIEDHHO_02261 8e-23 K Cro/C1-type HTH DNA-binding domain
PBIEDHHO_02262 3.5e-68 yoaW
PBIEDHHO_02263 2.8e-21 I Acyltransferase family
PBIEDHHO_02264 1.4e-09 S Uncharacterised protein family (UPF0715)
PBIEDHHO_02265 9.5e-87
PBIEDHHO_02267 2.2e-51
PBIEDHHO_02268 2.8e-57 kilA S Phage regulatory protein Rha (Phage_pRha)
PBIEDHHO_02269 0.0 S ATP-dependent DNA helicase activity
PBIEDHHO_02271 3.7e-152 S serine-type endopeptidase activity
PBIEDHHO_02272 1.6e-127 S DNA binding
PBIEDHHO_02273 9.1e-215
PBIEDHHO_02276 2.4e-60 ftsZ D Tubulin/FtsZ family, GTPase domain
PBIEDHHO_02280 0.0 S RNA-directed RNA polymerase activity
PBIEDHHO_02281 5.2e-81
PBIEDHHO_02282 2e-29 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PBIEDHHO_02284 3.6e-227 S hydrolase activity
PBIEDHHO_02287 1.2e-171
PBIEDHHO_02288 0.0 gp17a S Terminase-like family
PBIEDHHO_02289 3.4e-259
PBIEDHHO_02290 2.8e-231
PBIEDHHO_02291 5.6e-92
PBIEDHHO_02292 2e-183
PBIEDHHO_02293 3.7e-79
PBIEDHHO_02294 3.3e-65
PBIEDHHO_02296 2.7e-95
PBIEDHHO_02297 2.5e-86
PBIEDHHO_02298 6.6e-96
PBIEDHHO_02299 2.3e-57
PBIEDHHO_02301 8.8e-49
PBIEDHHO_02302 2.3e-54 S Domain of unknown function (DUF2479)
PBIEDHHO_02303 2.7e-13
PBIEDHHO_02304 4e-84 3.1.4.46, 5.4.2.11 C glycerophosphoryl diester phosphodiesterase
PBIEDHHO_02305 3.7e-58
PBIEDHHO_02306 3e-48
PBIEDHHO_02307 2.4e-173 xerH A Belongs to the 'phage' integrase family
PBIEDHHO_02312 1e-52
PBIEDHHO_02313 2.2e-203 S peptidoglycan catabolic process
PBIEDHHO_02314 0.0 S peptidoglycan catabolic process
PBIEDHHO_02315 7.2e-85 S Phage tail protein
PBIEDHHO_02316 4.6e-264 S Pfam Transposase IS66
PBIEDHHO_02318 5.9e-93
PBIEDHHO_02319 6e-269 M Pectate lyase superfamily protein
PBIEDHHO_02320 6.1e-50 M Ami_2
PBIEDHHO_02322 3.4e-31 S Bacteriophage holin
PBIEDHHO_02325 1.6e-88 S response regulator aspartate phosphatase
PBIEDHHO_02327 1.4e-94 dinB2 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PBIEDHHO_02328 3.2e-208 ltrA L DNA polymerase
PBIEDHHO_02329 5.8e-121 dinB2 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PBIEDHHO_02330 4.8e-41 S YolD-like protein
PBIEDHHO_02331 1.8e-128 yunB S Sporulation protein YunB (Spo_YunB)
PBIEDHHO_02333 5.5e-98 yokK S SMI1 / KNR4 family
PBIEDHHO_02334 2.2e-217 yobL L A nuclease of the HNH/ENDO VII superfamily with conserved LHH
PBIEDHHO_02335 2.1e-76 yokF 3.1.31.1 L RNA catabolic process
PBIEDHHO_02336 1.5e-49 L Recombinase
PBIEDHHO_02337 4.6e-62 pbuX F xanthine
PBIEDHHO_02338 2.9e-94 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PBIEDHHO_02339 1.9e-286 ypwA 3.4.17.19 E Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
PBIEDHHO_02340 0.0 ypvA 3.6.4.12 KL COG1199 Rad3-related DNA helicases
PBIEDHHO_02342 6.6e-22 S YpzG-like protein
PBIEDHHO_02343 2e-74 yqgA
PBIEDHHO_02344 2.9e-218 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PBIEDHHO_02345 3.4e-46 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PBIEDHHO_02346 5.9e-97 ypsA S Belongs to the UPF0398 family
PBIEDHHO_02347 5.8e-28 cotD S Inner spore coat protein D
PBIEDHHO_02349 7.5e-225 yprB L RNase_H superfamily
PBIEDHHO_02350 0.0 yprA L COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster
PBIEDHHO_02351 1.3e-87 ypqE 2.7.1.199 G COG2190 Phosphotransferase system IIA components
PBIEDHHO_02352 1.1e-60 hspX O Belongs to the small heat shock protein (HSP20) family
PBIEDHHO_02353 3.4e-38 yppG S YppG-like protein
PBIEDHHO_02355 2e-11 yppE S Bacterial domain of unknown function (DUF1798)
PBIEDHHO_02358 9.2e-178 yppC S Protein of unknown function (DUF2515)
PBIEDHHO_02359 1.2e-109 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PBIEDHHO_02360 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PBIEDHHO_02361 1.4e-86 ypoC
PBIEDHHO_02362 7.8e-120 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PBIEDHHO_02363 3.4e-129 dnaD L DNA replication protein DnaD
PBIEDHHO_02364 7.1e-250 asnS 6.1.1.22 J asparaginyl-tRNA
PBIEDHHO_02365 2.9e-218 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
PBIEDHHO_02366 1.4e-73 ypmB S protein conserved in bacteria
PBIEDHHO_02367 6.7e-23 ypmA S Protein of unknown function (DUF4264)
PBIEDHHO_02368 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PBIEDHHO_02369 3.9e-63 panD 4.1.1.11 H Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
PBIEDHHO_02370 1.2e-152 panC 2.7.4.25, 6.3.2.1 H Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
PBIEDHHO_02371 2e-149 panB 2.1.2.11 H Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
PBIEDHHO_02372 4.9e-179 birA 6.3.4.15 K Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PBIEDHHO_02373 5.6e-209 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PBIEDHHO_02374 4.5e-208 bshA GT4 M N-acetyl-alpha-D-glucosaminyl L-malate synthase
PBIEDHHO_02375 1e-125 bshB1 S proteins, LmbE homologs
PBIEDHHO_02376 7.2e-71 mgsA 2.7.1.24, 4.2.3.3 G methylglyoxal synthase
PBIEDHHO_02377 3.8e-145 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PBIEDHHO_02378 1.8e-56 ypjD 2.5.1.19 S Nucleotide pyrophosphohydrolase
PBIEDHHO_02379 4.7e-157 ypjC S Uncharacterized protein conserved in bacteria (DUF2179)
PBIEDHHO_02380 2.5e-222 oxdC 4.1.1.2 G Oxalate decarboxylase
PBIEDHHO_02381 1.5e-138 ypjB S sporulation protein
PBIEDHHO_02382 5.2e-99 ypjA S membrane
PBIEDHHO_02383 5.7e-146 qcrC C Menaquinol-cytochrome c reductase cytochrome b c subunit
PBIEDHHO_02384 6.7e-127 petB C COG1290 Cytochrome b subunit of the bc complex
PBIEDHHO_02385 8.7e-95 qcrA C Menaquinol-cytochrome c reductase
PBIEDHHO_02386 8.3e-73 ypiF S Protein of unknown function (DUF2487)
PBIEDHHO_02387 8.1e-99 ypiB S Belongs to the UPF0302 family
PBIEDHHO_02388 1.5e-228 S COG0457 FOG TPR repeat
PBIEDHHO_02389 1.3e-227 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PBIEDHHO_02390 1.8e-201 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
PBIEDHHO_02391 3.1e-198 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PBIEDHHO_02392 5.5e-136 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PBIEDHHO_02393 5.6e-225 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PBIEDHHO_02394 3.3e-110 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E Belongs to the TrpF family
PBIEDHHO_02395 1.9e-122 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
PBIEDHHO_02396 6.3e-153 trpD 2.4.2.18, 4.1.3.27 E Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PBIEDHHO_02397 5.8e-283 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PBIEDHHO_02398 1.7e-58 aroH 2.7.4.25, 5.4.99.5 E Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis
PBIEDHHO_02399 1.2e-197 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PBIEDHHO_02400 2.3e-215 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PBIEDHHO_02401 7.4e-138 cheR 2.1.1.80 NT COG1352 Methylase of chemotaxis methyl-accepting proteins
PBIEDHHO_02402 2.2e-78 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
PBIEDHHO_02403 4.8e-196 hepT 2.5.1.30, 2.5.1.83, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PBIEDHHO_02404 3e-130 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PBIEDHHO_02405 1.5e-135 hepS 2.5.1.30 H Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
PBIEDHHO_02406 1.3e-34 mtrB K Required for transcription attenuation control in the Trp operon. This trans-acting factor seems to recognize a 10 bases nucleotide sequence in the Trp leader transcript causing transcription termination. Binds the leader RNA only in presence of L-tryptophan
PBIEDHHO_02407 5.4e-101 folE 3.5.4.16 H GTP cyclohydrolase
PBIEDHHO_02408 4.7e-42 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PBIEDHHO_02409 6.4e-279 spoIVA S ATPase. Has a role at an early stage in the morphogenesis of the spore coat
PBIEDHHO_02410 1.3e-10 yphF
PBIEDHHO_02411 7.1e-130 yphF
PBIEDHHO_02412 1.5e-16 yphE S Protein of unknown function (DUF2768)
PBIEDHHO_02413 5.2e-187 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PBIEDHHO_02414 1.8e-248 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PBIEDHHO_02415 2.4e-99 yphA
PBIEDHHO_02416 1.5e-178 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PBIEDHHO_02417 2.1e-205 rpsA 1.17.7.4 J Ribosomal protein S1
PBIEDHHO_02418 7.5e-110 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PBIEDHHO_02419 2.5e-12 S Family of unknown function (DUF5359)
PBIEDHHO_02420 1.1e-57 ypfA M Flagellar protein YcgR
PBIEDHHO_02421 2.1e-244 hemX 2.1.1.107, 4.2.1.75 H sporulation protein
PBIEDHHO_02422 4.7e-149 sleB 3.5.1.28 M Spore cortex-lytic enzyme
PBIEDHHO_02423 1.6e-120 prsW S Involved in the degradation of specific anti-sigma factors
PBIEDHHO_02424 7.2e-186 ypdA 1.18.1.2, 1.19.1.1, 1.8.1.9 O COG0492 Thioredoxin reductase
PBIEDHHO_02425 2e-244 gudB 1.4.1.2, 1.4.1.3 E Belongs to the Glu Leu Phe Val dehydrogenases family
PBIEDHHO_02426 2.2e-105 mecB NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
PBIEDHHO_02427 1.9e-141 ypbG S Calcineurin-like phosphoesterase superfamily domain
PBIEDHHO_02428 1.1e-83 ypbF S Protein of unknown function (DUF2663)
PBIEDHHO_02429 3.7e-60 ypbE M Lysin motif
PBIEDHHO_02430 2.4e-96 ypbD S metal-dependent membrane protease
PBIEDHHO_02431 2.5e-275 recQ 3.6.4.12 L DNA helicase
PBIEDHHO_02432 1.5e-189 ypbB 5.1.3.1 S protein conserved in bacteria
PBIEDHHO_02433 3.6e-41 fer C Ferredoxin
PBIEDHHO_02434 1.6e-92 fmnP U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PBIEDHHO_02435 9.1e-292 serA 1.1.1.399, 1.1.1.95 E Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PBIEDHHO_02436 2.3e-169 rsiX
PBIEDHHO_02437 2.2e-102 sigX K Belongs to the sigma-70 factor family. ECF subfamily
PBIEDHHO_02438 0.0 resE 2.7.13.3 T Histidine kinase
PBIEDHHO_02439 8.8e-133 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PBIEDHHO_02440 1.5e-193 ccsA O 'COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component'
PBIEDHHO_02441 1.1e-308 ccs1 O COG1333 ResB protein required for cytochrome c biosynthesis
PBIEDHHO_02442 3.4e-97 resA CO Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c
PBIEDHHO_02443 6.4e-131 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PBIEDHHO_02444 3.8e-88 spmB S Spore maturation protein
PBIEDHHO_02445 1.3e-102 spmA S Spore maturation protein
PBIEDHHO_02446 1.1e-209 dacB 3.4.16.4 M Belongs to the peptidase S11 family
PBIEDHHO_02447 8.1e-82 ypuI S Protein of unknown function (DUF3907)
PBIEDHHO_02448 5.1e-102 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PBIEDHHO_02449 3.1e-128 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PBIEDHHO_02451 6.2e-88 ypuF S Domain of unknown function (DUF309)
PBIEDHHO_02452 1e-63 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PBIEDHHO_02453 5.6e-80 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PBIEDHHO_02454 2.3e-226 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PBIEDHHO_02455 7.2e-110 ribE 2.5.1.9 H Riboflavin synthase
PBIEDHHO_02456 6.2e-202 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PBIEDHHO_02457 5.1e-46 ypuD
PBIEDHHO_02458 3.9e-96 sipT 3.4.21.89 U Belongs to the peptidase S26 family
PBIEDHHO_02459 8.5e-79 ccdC1 O Protein of unknown function (DUF1453)
PBIEDHHO_02460 5.7e-79 ppiB 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PBIEDHHO_02461 2.6e-150 ypuA S Secreted protein
PBIEDHHO_02462 6.5e-251 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PBIEDHHO_02463 6.2e-266 spoVAF EG Stage V sporulation protein AF
PBIEDHHO_02464 2.4e-107 spoVAEA S stage V sporulation protein
PBIEDHHO_02465 2.5e-56 spoVAEB S stage V sporulation protein
PBIEDHHO_02466 3.5e-188 spoVAD I Stage V sporulation protein AD
PBIEDHHO_02467 1.3e-78 spoVAC S stage V sporulation protein AC
PBIEDHHO_02468 1.3e-67 spoVAB S Stage V sporulation protein AB
PBIEDHHO_02469 1.5e-109 spoVAA S Stage V sporulation protein AA
PBIEDHHO_02470 6.9e-136 sigF K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PBIEDHHO_02471 1.8e-75 spoIIAB 2.7.11.1 F Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti-anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition
PBIEDHHO_02472 2.3e-57 spoIIAA T Belongs to the anti-sigma-factor antagonist family
PBIEDHHO_02473 5.9e-211 dacF 3.4.16.4 M Belongs to the peptidase S11 family
PBIEDHHO_02474 4.2e-147 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
PBIEDHHO_02475 3.1e-228 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
PBIEDHHO_02476 2.7e-163 xerD L recombinase XerD
PBIEDHHO_02477 6.4e-37 S Protein of unknown function (DUF4227)
PBIEDHHO_02478 2.7e-79 fur P Belongs to the Fur family
PBIEDHHO_02479 2.7e-109 spoIIM S Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane
PBIEDHHO_02480 8.1e-32 yqkK
PBIEDHHO_02481 3e-23
PBIEDHHO_02482 3.6e-241 mleA 1.1.1.38 C malic enzyme
PBIEDHHO_02483 1.9e-240 mleN C Na H antiporter
PBIEDHHO_02484 1.3e-268 aspA 4.2.1.2, 4.3.1.1 E Aspartate ammonia-lyase
PBIEDHHO_02485 1.2e-183 ansA 3.5.1.1 EJ L-asparaginase
PBIEDHHO_02486 5e-57 ansR K Transcriptional regulator
PBIEDHHO_02487 2.5e-214 yqxK 3.6.4.12 L DNA helicase
PBIEDHHO_02488 9e-93 nudF 3.6.1.13 L Belongs to the Nudix hydrolase family
PBIEDHHO_02490 1.2e-163 yqkF C oxidoreductases (related to aryl-alcohol dehydrogenases)
PBIEDHHO_02492 3.4e-166 yqkD S COG1073 Hydrolases of the alpha beta superfamily
PBIEDHHO_02493 3.2e-39 yqkC S Protein of unknown function (DUF2552)
PBIEDHHO_02494 1.6e-58 yqkB S Belongs to the HesB IscA family
PBIEDHHO_02495 1.6e-166 yqkA K GrpB protein
PBIEDHHO_02497 2.8e-87 yqjY K acetyltransferase
PBIEDHHO_02498 5.7e-233 polYB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PBIEDHHO_02499 9.3e-56 S YolD-like protein
PBIEDHHO_02501 1.8e-145 yueF S transporter activity
PBIEDHHO_02503 5e-176 coaA 2.7.1.33 F Pantothenic acid kinase
PBIEDHHO_02504 1.1e-242 dsdA 4.3.1.18 E Belongs to the serine threonine dehydratase family. DsdA subfamily
PBIEDHHO_02505 1.8e-136 yqjQ S Belongs to the short-chain dehydrogenases reductases (SDR) family
PBIEDHHO_02506 2.3e-168 yqjP S COG0491 Zn-dependent hydrolases, including glyoxylases
PBIEDHHO_02507 7.9e-141 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PBIEDHHO_02508 1.8e-156 K LysR substrate binding domain
PBIEDHHO_02509 1.6e-46 S GlpM protein
PBIEDHHO_02510 8.2e-193 namA 1.6.99.1 C Catalyzes the reduction of the double bond of an array of alpha,beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes
PBIEDHHO_02511 4.5e-143 yqjL S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
PBIEDHHO_02512 4e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PBIEDHHO_02513 2.8e-168 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PBIEDHHO_02514 7.7e-285 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PBIEDHHO_02515 1.3e-265 gnd 1.1.1.343, 1.1.1.44 G Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PBIEDHHO_02516 9.4e-231 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PBIEDHHO_02517 7.4e-27 yqzJ
PBIEDHHO_02518 2.1e-146 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PBIEDHHO_02519 1.2e-200 yqjE 3.4.11.4 E COG2195 Di- and tripeptidases
PBIEDHHO_02520 3e-284 mmdA 2.1.3.15, 6.4.1.3 I COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PBIEDHHO_02521 2e-71 mce 4.4.1.5, 5.1.99.1, 5.4.99.2 E COG0346 Lactoylglutathione lyase and related lyases
PBIEDHHO_02523 3.6e-91 yqjB S protein conserved in bacteria
PBIEDHHO_02524 7.7e-169 yqjA S Putative aromatic acid exporter C-terminal domain
PBIEDHHO_02525 5.2e-125 artM 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
PBIEDHHO_02526 1.1e-105 artQ E COG0765 ABC-type amino acid transport system, permease component
PBIEDHHO_02527 4.2e-133 artP ET Belongs to the bacterial solute-binding protein 3 family
PBIEDHHO_02528 1e-75 yqiW S Belongs to the UPF0403 family
PBIEDHHO_02529 1.6e-168 yegS 2.7.1.107 I COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
PBIEDHHO_02530 3.5e-193 bfmBB 2.3.1.168, 2.3.1.61 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PBIEDHHO_02531 6.7e-184 bfmBAB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PBIEDHHO_02532 7.8e-164 bfmBAA 1.2.4.4 C COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PBIEDHHO_02533 5.7e-261 lpdA 1.8.1.4 C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PBIEDHHO_02534 2e-205 buk 2.7.2.7 C Belongs to the acetokinase family
PBIEDHHO_02535 2.6e-205 ldh 1.4.1.9 E Belongs to the Glu Leu Phe Val dehydrogenases family
PBIEDHHO_02536 1.3e-149 pta 2.3.1.19, 2.3.1.8 C phosphate butyryltransferase
PBIEDHHO_02537 0.0 bkdR 2.7.13.3 KT Transcriptional regulator
PBIEDHHO_02538 2.7e-33 yqzF S Protein of unknown function (DUF2627)
PBIEDHHO_02539 7.1e-156 prpB 4.1.3.30 G Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
PBIEDHHO_02540 7.8e-266 prpD 4.2.1.79 S 2-methylcitrate dehydratase
PBIEDHHO_02541 3.5e-205 prpC 2.3.3.1, 2.3.3.5 C Belongs to the citrate synthase family
PBIEDHHO_02542 5.3e-201 mmgC I acyl-CoA dehydrogenase
PBIEDHHO_02543 8.5e-143 hbdA 1.1.1.157 I Dehydrogenase
PBIEDHHO_02544 3.2e-209 mmgA 2.3.1.9 I Belongs to the thiolase family
PBIEDHHO_02545 9.6e-127 yqiK 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PBIEDHHO_02546 1.4e-97 amiC 3.5.1.28 M Cell wall hydrolase autolysin
PBIEDHHO_02547 5.7e-17
PBIEDHHO_02548 2.3e-92 ytaF P Probably functions as a manganese efflux pump
PBIEDHHO_02549 3.7e-111 K Protein of unknown function (DUF1232)
PBIEDHHO_02551 5.8e-208 yqiG C COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family
PBIEDHHO_02554 7e-204 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PBIEDHHO_02555 2.7e-143 KT May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process
PBIEDHHO_02556 3.2e-234 rseP 3.4.21.116 M Stage IV sporulation protein B
PBIEDHHO_02557 6.2e-310 recN L May be involved in recombinational repair of damaged DNA
PBIEDHHO_02558 4.3e-77 argR K Regulates arginine biosynthesis genes
PBIEDHHO_02559 9.9e-152 rrmJ 2.1.1.226, 2.1.1.227 J rRNA methylase
PBIEDHHO_02560 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PBIEDHHO_02561 7e-156 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PBIEDHHO_02562 1.3e-38 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PBIEDHHO_02563 2.5e-242 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PBIEDHHO_02564 5.7e-155 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PBIEDHHO_02565 9.5e-65 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PBIEDHHO_02566 1.4e-66 yqhY S protein conserved in bacteria
PBIEDHHO_02567 8.4e-254 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
PBIEDHHO_02568 4.9e-63 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PBIEDHHO_02569 1.3e-58 spoIIIAH S SpoIIIAH-like protein
PBIEDHHO_02570 3.8e-109 spoIIIAG S stage III sporulation protein AG
PBIEDHHO_02571 1e-100 spoIIIAF S Stage III sporulation protein AF (Spore_III_AF)
PBIEDHHO_02572 4.1e-199 spoIIIAE S stage III sporulation protein AE
PBIEDHHO_02573 3.3e-41 spoIIIAD S Stage III sporulation protein AD
PBIEDHHO_02574 7.6e-29 spoIIIAC S stage III sporulation protein AC
PBIEDHHO_02575 1e-82 spoIIIAB S Stage III sporulation protein
PBIEDHHO_02576 1.7e-165 spoIIIAA S stage III sporulation protein AA
PBIEDHHO_02577 6.7e-36 yqhV S Protein of unknown function (DUF2619)
PBIEDHHO_02578 2.1e-97 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PBIEDHHO_02579 5.9e-170 yqhT 3.4.11.9, 3.4.13.9 E COG0006 Xaa-Pro aminopeptidase
PBIEDHHO_02580 1.1e-84 yqhR S Conserved membrane protein YqhR
PBIEDHHO_02581 9.1e-170 yqhQ S Protein of unknown function (DUF1385)
PBIEDHHO_02582 1.2e-59 yqhP
PBIEDHHO_02583 5.1e-159 yqhO S esterase of the alpha-beta hydrolase superfamily
PBIEDHHO_02584 4.7e-73 mntR K Involved in manganese homeostasis. Might activate the transcription of the mntABCD operon
PBIEDHHO_02585 4.1e-158 lipM 6.3.1.20 H Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation
PBIEDHHO_02586 2.7e-64 yqhL P COG0607 Rhodanese-related sulfurtransferase
PBIEDHHO_02587 3.6e-282 gcvPB 1.4.4.2 E The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PBIEDHHO_02588 1.2e-247 gcvPA 1.4.4.2 E The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PBIEDHHO_02589 5.7e-200 gcvT 1.4.4.2, 2.1.2.10 E The glycine cleavage system catalyzes the degradation of glycine
PBIEDHHO_02590 0.0 yqhH L COG0553 Superfamily II DNA RNA helicases, SNF2 family
PBIEDHHO_02591 3.3e-149 yqhG S Bacterial protein YqhG of unknown function
PBIEDHHO_02592 1.7e-21 sinI S Anti-repressor SinI
PBIEDHHO_02593 3.9e-54 sinR K transcriptional
PBIEDHHO_02594 1.5e-138 tasA S Cell division protein FtsN
PBIEDHHO_02595 5.2e-67 sipW 3.4.21.89 U Signal peptidase
PBIEDHHO_02596 3.6e-112 yqxM
PBIEDHHO_02597 1.1e-53 yqzG S Protein of unknown function (DUF3889)
PBIEDHHO_02598 1.5e-25 yqzE S YqzE-like protein
PBIEDHHO_02599 5.4e-57 S ComG operon protein 7
PBIEDHHO_02600 4.1e-21 comGF U Putative Competence protein ComGF
PBIEDHHO_02601 1.2e-20 comGE
PBIEDHHO_02602 6.4e-70 gspH NU Tfp pilus assembly protein FimT
PBIEDHHO_02603 1.3e-48 comGC U Required for transformation and DNA binding
PBIEDHHO_02604 4e-179 comGB NU COG1459 Type II secretory pathway, component PulF
PBIEDHHO_02605 8.9e-198 comGA NU COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
PBIEDHHO_02606 6.7e-181 corA P Mg2 transporter protein
PBIEDHHO_02607 1.5e-231 corC1 S COG1253 Hemolysins and related proteins containing CBS domains
PBIEDHHO_02608 3e-137 yqhA T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PBIEDHHO_02610 1.9e-62 yqgZ 1.20.4.1 P Belongs to the ArsC family
PBIEDHHO_02611 3.1e-37 yqgY S Protein of unknown function (DUF2626)
PBIEDHHO_02612 3.6e-122 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
PBIEDHHO_02613 5.4e-20 yqgW S Protein of unknown function (DUF2759)
PBIEDHHO_02614 1.7e-48 yqgV S Thiamine-binding protein
PBIEDHHO_02615 2.3e-187 yqgU
PBIEDHHO_02616 5.3e-201 yqgT 3.4.19.11 E Gamma-D-glutamyl-L-diamino acid endopeptidase
PBIEDHHO_02617 1.8e-178 glcK 2.7.1.2 G Glucokinase
PBIEDHHO_02618 1.6e-27 yqgQ S Protein conserved in bacteria
PBIEDHHO_02619 4.8e-203 nhaC C Na H antiporter
PBIEDHHO_02620 4e-07 yqgO
PBIEDHHO_02621 6e-89 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PBIEDHHO_02622 9.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PBIEDHHO_02623 1.2e-50 yqzD
PBIEDHHO_02624 1.3e-73 yqzC S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PBIEDHHO_02625 6.4e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PBIEDHHO_02626 2.2e-140 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PBIEDHHO_02627 8.5e-154 pstA P Phosphate transport system permease
PBIEDHHO_02628 6.8e-154 pstC P probably responsible for the translocation of the substrate across the membrane
PBIEDHHO_02629 2.3e-154 pstS P Phosphate
PBIEDHHO_02630 0.0 pbpA 3.4.16.4 M penicillin-binding protein
PBIEDHHO_02631 3.3e-223 yqgE EGP Major facilitator superfamily
PBIEDHHO_02632 5.3e-115 sodA 1.15.1.1 P radicals which are normally produced within the cells and which are toxic to biological systems
PBIEDHHO_02633 4.2e-70 yqgC S protein conserved in bacteria
PBIEDHHO_02634 5.3e-128 yqgB S Protein of unknown function (DUF1189)
PBIEDHHO_02635 4.2e-44 yqfZ M LysM domain
PBIEDHHO_02636 5.9e-200 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PBIEDHHO_02637 6.7e-52 yqfX S membrane
PBIEDHHO_02638 6.7e-107 yqfW S Belongs to the 5'(3')-deoxyribonucleotidase family
PBIEDHHO_02639 2.4e-71 zur P Belongs to the Fur family
PBIEDHHO_02640 1.1e-153 yqfU S Uncharacterized protein conserved in bacteria (DUF2179)
PBIEDHHO_02641 2.7e-36 yqfT S Protein of unknown function (DUF2624)
PBIEDHHO_02642 1.1e-161 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PBIEDHHO_02643 5.7e-239 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PBIEDHHO_02644 1.6e-25 yqfQ S YqfQ-like protein
PBIEDHHO_02645 1.9e-175 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PBIEDHHO_02646 1.8e-209 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PBIEDHHO_02647 1.6e-124 trmK 2.1.1.217 S SAM-dependent methyltransferase
PBIEDHHO_02648 1.3e-60 cccA C COG2010 Cytochrome c, mono- and diheme variants
PBIEDHHO_02649 3.1e-201 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PBIEDHHO_02650 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PBIEDHHO_02651 8.7e-87 yaiI S Belongs to the UPF0178 family
PBIEDHHO_02652 1.4e-147 yqfL 2.7.11.33, 2.7.4.28 S Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PBIEDHHO_02653 1.3e-111 ccpN K CBS domain
PBIEDHHO_02654 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PBIEDHHO_02655 3.7e-173 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PBIEDHHO_02656 6.1e-140 recO L Involved in DNA repair and RecF pathway recombination
PBIEDHHO_02657 1.8e-16 S YqzL-like protein
PBIEDHHO_02658 4e-167 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PBIEDHHO_02659 2.7e-70 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PBIEDHHO_02660 8.6e-63 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
PBIEDHHO_02661 9.7e-80 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PBIEDHHO_02662 0.0 yqfF S membrane-associated HD superfamily hydrolase
PBIEDHHO_02663 2.1e-174 phoH T Phosphate starvation-inducible protein PhoH
PBIEDHHO_02664 2.3e-207 yqfD 3.1.3.102, 3.1.3.104 S Stage IV sporulation
PBIEDHHO_02665 9.3e-46 yqfC S sporulation protein YqfC
PBIEDHHO_02666 2.2e-22 yqfB
PBIEDHHO_02667 5.3e-120 yqfA S UPF0365 protein
PBIEDHHO_02668 4.7e-225 yqeZ O COG1030 Membrane-bound serine protease (ClpP class)
PBIEDHHO_02669 1.2e-68 yqeY S Yqey-like protein
PBIEDHHO_02670 1.2e-19 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PBIEDHHO_02671 1.7e-152 yqeW P COG1283 Na phosphate symporter
PBIEDHHO_02672 4.3e-258 yqeV 2.8.4.5 J ribosomal protein S12 methylthiotransferase
PBIEDHHO_02673 6.3e-137 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PBIEDHHO_02674 6e-174 prmA J Methylates ribosomal protein L11
PBIEDHHO_02675 1.2e-197 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PBIEDHHO_02676 0.0 dnaK O Heat shock 70 kDa protein
PBIEDHHO_02677 2.1e-73 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PBIEDHHO_02678 9.8e-186 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PBIEDHHO_02679 6.3e-210 hemN H Involved in the biosynthesis of porphyrin-containing compound
PBIEDHHO_02680 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PBIEDHHO_02681 2.7e-52 yqxA S Protein of unknown function (DUF3679)
PBIEDHHO_02682 2e-219 spoIIP M stage II sporulation protein P
PBIEDHHO_02683 5.6e-203 gpr 3.4.24.78 C Initiates the rapid degradation of small, acid-soluble proteins during spore germination
PBIEDHHO_02684 2.2e-36 rpsT J Binds directly to 16S ribosomal RNA
PBIEDHHO_02685 4.4e-178 holA 2.7.7.7 L DNA polymerase III delta subunit
PBIEDHHO_02686 3.2e-15 S YqzM-like protein
PBIEDHHO_02687 1.8e-90 comEC S Competence protein ComEC
PBIEDHHO_02688 2.2e-297 comEC S Competence protein ComEC
PBIEDHHO_02689 8.9e-104 comEB 3.5.4.12 F ComE operon protein 2
PBIEDHHO_02690 3.1e-94 comEA L COG1555 DNA uptake protein and related DNA-binding proteins
PBIEDHHO_02691 8.2e-143 comER E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PBIEDHHO_02692 8.7e-136 yqeM Q Methyltransferase
PBIEDHHO_02693 2.9e-60 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PBIEDHHO_02694 6.2e-102 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
PBIEDHHO_02695 6.3e-102 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PBIEDHHO_02696 1.5e-43 yhbY J RNA-binding protein containing KH domain, possibly ribosomal protein
PBIEDHHO_02697 1.4e-153 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PBIEDHHO_02698 1.5e-211 yqeH S In Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
PBIEDHHO_02699 7.7e-94 yqeG S hydrolase of the HAD superfamily
PBIEDHHO_02701 8.6e-136 yqeF E GDSL-like Lipase/Acylhydrolase
PBIEDHHO_02702 1.4e-133 3.5.1.104 G Polysaccharide deacetylase
PBIEDHHO_02703 4.6e-108 xlyA 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
PBIEDHHO_02704 7.5e-104 yqeD S SNARE associated Golgi protein
PBIEDHHO_02705 1.3e-15 2.3.1.57 K Acetyltransferase (GNAT) domain
PBIEDHHO_02706 6.3e-187 EGP Major facilitator Superfamily
PBIEDHHO_02707 6.4e-123 sigK K sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PBIEDHHO_02708 7.1e-158 axeA S Carbohydrate esterase, sialic acid-specific acetylesterase
PBIEDHHO_02709 6.7e-81 K Transcriptional regulator PadR-like family
PBIEDHHO_02710 8.9e-98 adk 2.7.4.3 F adenylate kinase activity
PBIEDHHO_02711 2e-26 yyaR K acetyltransferase
PBIEDHHO_02712 9.6e-221 tetL EGP Major facilitator Superfamily
PBIEDHHO_02713 1.9e-86 yrdA S DinB family
PBIEDHHO_02714 7e-139 S hydrolase
PBIEDHHO_02715 1.6e-138 ybjI 3.1.3.102, 3.1.3.104, 3.1.3.23 S Sucrose-6F-phosphate phosphohydrolase
PBIEDHHO_02716 5.1e-117 glvR K Helix-turn-helix domain, rpiR family
PBIEDHHO_02717 1.3e-171 manA 5.3.1.8 G mannose-6-phosphate isomerase
PBIEDHHO_02718 0.0 manP 2.7.1.191, 2.7.1.202 G phosphotransferase system
PBIEDHHO_02719 0.0 manR 2.7.1.200, 2.7.1.202 GKT transcriptional antiterminator
PBIEDHHO_02720 1.4e-167 romA S Beta-lactamase superfamily domain
PBIEDHHO_02721 1.8e-73 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PBIEDHHO_02722 2.8e-160 yybE K Transcriptional regulator
PBIEDHHO_02723 1.2e-206 ynfM EGP Major facilitator Superfamily
PBIEDHHO_02724 0.0 MA20_16700 1.14.14.1, 1.6.2.4 C Belongs to the cytochrome P450 family
PBIEDHHO_02725 8.8e-96 Z012_03230 K Tetracycline repressor, C-terminal all-alpha domain
PBIEDHHO_02726 1.6e-86 yrhH Q methyltransferase
PBIEDHHO_02728 1.4e-139 focA P Formate nitrite
PBIEDHHO_02729 1e-60 yrhF S Uncharacterized conserved protein (DUF2294)
PBIEDHHO_02730 0.0 fdhA 1.17.1.10, 1.17.1.9 C formate dehydrogenase, alpha subunit
PBIEDHHO_02731 3.2e-78 yrhD S Protein of unknown function (DUF1641)
PBIEDHHO_02732 1e-34 yrhC S YrhC-like protein
PBIEDHHO_02733 3.7e-210 mccB 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PBIEDHHO_02734 7.8e-166 mccA 2.5.1.134, 2.5.1.47 E Cysteine synthase
PBIEDHHO_02735 4.7e-123 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PBIEDHHO_02736 3.7e-114 yrrT 4.4.1.21 Q Could be a S-adenosyl-L-methionine-dependent methyltransferase
PBIEDHHO_02737 5.3e-27 yrzA S Protein of unknown function (DUF2536)
PBIEDHHO_02738 1.2e-65 yrrS S Protein of unknown function (DUF1510)
PBIEDHHO_02739 0.0 pbpI 3.4.16.4 M Penicillin-binding Protein
PBIEDHHO_02740 5.9e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PBIEDHHO_02741 1.1e-113 udk 2.7.1.48 F Cytidine monophosphokinase
PBIEDHHO_02742 5.1e-245 yegQ O COG0826 Collagenase and related proteases
PBIEDHHO_02743 2.8e-171 yegQ O Peptidase U32
PBIEDHHO_02744 1.6e-112 yrrM 2.1.1.104 S O-methyltransferase
PBIEDHHO_02745 7.7e-181 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PBIEDHHO_02746 7.1e-46 yrzB S Belongs to the UPF0473 family
PBIEDHHO_02747 3.6e-70 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PBIEDHHO_02748 8.5e-41 yrzL S Belongs to the UPF0297 family
PBIEDHHO_02749 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PBIEDHHO_02750 2.2e-156 yrrI S AI-2E family transporter
PBIEDHHO_02751 1.6e-126 glnQ 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
PBIEDHHO_02752 9.7e-144 glnH ET Belongs to the bacterial solute-binding protein 3 family
PBIEDHHO_02753 6.8e-108 gluC P ABC transporter
PBIEDHHO_02754 6e-104 glnP P ABC transporter
PBIEDHHO_02755 2.1e-08 S Protein of unknown function (DUF3918)
PBIEDHHO_02756 2.9e-30 yrzR
PBIEDHHO_02757 1.1e-77 yrrD S protein conserved in bacteria
PBIEDHHO_02758 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PBIEDHHO_02759 1.7e-18 S COG0457 FOG TPR repeat
PBIEDHHO_02760 5e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PBIEDHHO_02761 7e-209 iscS 2.8.1.7 E Cysteine desulfurase
PBIEDHHO_02762 2.9e-63 cymR K Transcriptional regulator
PBIEDHHO_02763 7e-234 rarA L COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase
PBIEDHHO_02764 3.3e-138 yrvM H COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
PBIEDHHO_02765 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PBIEDHHO_02766 4.5e-241 hisS 6.1.1.21 J histidyl-tRNA synthetase
PBIEDHHO_02769 1e-266 lytH 3.5.1.28 M COG3103 SH3 domain protein
PBIEDHHO_02770 1.1e-74 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PBIEDHHO_02771 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PBIEDHHO_02772 8.6e-90 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PBIEDHHO_02773 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PBIEDHHO_02774 2.7e-44 yrvD S Lipopolysaccharide assembly protein A domain
PBIEDHHO_02775 4.6e-80 yrvC P regulatory, ligand-binding protein related to C-terminal domains of K channels
PBIEDHHO_02776 0.0 secF U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PBIEDHHO_02777 8e-48 yrzD S Post-transcriptional regulator
PBIEDHHO_02778 1.2e-267 spoVB S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PBIEDHHO_02779 5.1e-103 yrbG S membrane
PBIEDHHO_02780 5.3e-60 yrzE S Protein of unknown function (DUF3792)
PBIEDHHO_02781 2.5e-37 yajC U Preprotein translocase subunit YajC
PBIEDHHO_02782 1.2e-227 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PBIEDHHO_02783 2.7e-191 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PBIEDHHO_02784 2.8e-20 yrzS S Protein of unknown function (DUF2905)
PBIEDHHO_02785 2.9e-182 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PBIEDHHO_02786 5.9e-106 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PBIEDHHO_02787 5e-90 bofC S BofC C-terminal domain
PBIEDHHO_02789 6.1e-47 S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PBIEDHHO_02790 1.6e-99 safA M spore coat assembly protein SafA
PBIEDHHO_02791 3.4e-208 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PBIEDHHO_02792 3.2e-142 nadC 1.4.3.16, 2.4.2.19 H Belongs to the NadC ModD family
PBIEDHHO_02793 4.8e-277 nadB 1.3.5.4, 1.4.3.16 H Catalyzes the oxidation of L-aspartate to iminoaspartate
PBIEDHHO_02794 3.4e-211 nifS 2.8.1.7 E Cysteine desulfurase
PBIEDHHO_02795 2.9e-88 niaR S small molecule binding protein (contains 3H domain)
PBIEDHHO_02796 6.1e-157 pheA 4.2.1.51 E Prephenate dehydratase
PBIEDHHO_02797 4.8e-73 pheB 5.4.99.5 S Belongs to the UPF0735 family
PBIEDHHO_02798 6.4e-235 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PBIEDHHO_02799 4.8e-105 spo0B T Sporulation initiation phospho-transferase B, C-terminal
PBIEDHHO_02800 5.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PBIEDHHO_02801 7e-56 ysxB J ribosomal protein
PBIEDHHO_02802 9.2e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
PBIEDHHO_02803 2.3e-156 spoIVFB S Stage IV sporulation protein
PBIEDHHO_02804 3.8e-137 spoIVFA M COG0739 Membrane proteins related to metalloendopeptidases
PBIEDHHO_02805 2.3e-142 minD D Belongs to the ParA family
PBIEDHHO_02806 2.2e-101 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PBIEDHHO_02807 1.1e-81 mreD M shape-determining protein
PBIEDHHO_02808 8e-157 mreC M Involved in formation and maintenance of cell shape
PBIEDHHO_02809 1.3e-182 mreB D Rod shape-determining protein MreB
PBIEDHHO_02810 4.5e-126 radC E Belongs to the UPF0758 family
PBIEDHHO_02811 3.8e-99 maf D septum formation protein Maf
PBIEDHHO_02812 2.5e-125 spoIIB S Sporulation related domain
PBIEDHHO_02813 4.6e-124 comC 3.4.23.43 NOU COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases
PBIEDHHO_02814 1.2e-228 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PBIEDHHO_02815 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PBIEDHHO_02816 3.1e-24
PBIEDHHO_02817 4.9e-185 ysxE S A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
PBIEDHHO_02818 5.7e-150 spoVID M stage VI sporulation protein D
PBIEDHHO_02819 7.1e-242 hemL 5.4.3.8 H Glutamate-1-semialdehyde aminotransferase
PBIEDHHO_02820 2.5e-183 hemB 4.2.1.24 H Belongs to the ALAD family
PBIEDHHO_02821 1.1e-136 hemD 2.1.1.107, 4.2.1.75 H Uroporphyrinogen-III synthase
PBIEDHHO_02822 1.8e-173 hemC 2.1.1.107, 2.5.1.61, 4.2.1.75 H Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps
PBIEDHHO_02823 3.6e-146 hemX O cytochrome C
PBIEDHHO_02824 2.1e-244 hemA 1.2.1.70 H Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
PBIEDHHO_02825 5.1e-84 ysxD
PBIEDHHO_02826 1.5e-106 engB D Necessary for normal cell division and for the maintenance of normal septation
PBIEDHHO_02827 0.0 lon 3.4.21.53 O ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
PBIEDHHO_02828 1e-309 lonB 2.7.7.7, 3.4.21.53 LO Belongs to the peptidase S16 family
PBIEDHHO_02829 3.8e-232 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PBIEDHHO_02830 7.5e-212 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PBIEDHHO_02831 1e-187 ysoA H Tetratricopeptide repeat
PBIEDHHO_02832 1.3e-113 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PBIEDHHO_02833 2.5e-272 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PBIEDHHO_02834 6.5e-196 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PBIEDHHO_02835 9e-284 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PBIEDHHO_02836 2.4e-192 ilvC 1.1.1.86 EH Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PBIEDHHO_02837 3.5e-83 ilvN 2.2.1.6 E Acetolactate synthase
PBIEDHHO_02838 0.0 ilvB 2.2.1.6 E Acetolactate synthase
PBIEDHHO_02843 6.1e-88 ysnB S Phosphoesterase
PBIEDHHO_02844 8e-100 rdgB 3.6.1.66 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PBIEDHHO_02845 5.8e-132 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
PBIEDHHO_02846 3.4e-197 gerM S COG5401 Spore germination protein
PBIEDHHO_02847 6.2e-151 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PBIEDHHO_02848 4.1e-72 ysmB 2.4.2.28 K helix_turn_helix multiple antibiotic resistance protein
PBIEDHHO_02849 2e-30 gerE K Transcriptional regulator
PBIEDHHO_02850 2.1e-73 ybgC 3.1.2.23, 3.1.2.28 S thioesterase
PBIEDHHO_02851 3.9e-147 sdhB 1.3.5.1, 1.3.5.4 C succinate dehydrogenase
PBIEDHHO_02852 0.0 sdhA 1.3.5.1, 1.3.5.4 C succinate dehydrogenase
PBIEDHHO_02853 4.8e-108 sdhC C succinate dehydrogenase
PBIEDHHO_02854 3.5e-79 yslB S Protein of unknown function (DUF2507)
PBIEDHHO_02855 1.2e-211 lysC 1.1.1.3, 2.7.2.4 E Belongs to the aspartokinase family
PBIEDHHO_02856 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PBIEDHHO_02857 2.5e-52 trxA O Belongs to the thioredoxin family
PBIEDHHO_02858 8.9e-297 xsa 3.2.1.55 GH51 G Alpha-L-arabinofuranosidase C-terminus
PBIEDHHO_02859 3e-176 etfA C Electron transfer flavoprotein
PBIEDHHO_02860 2.2e-137 etfB C Electron transfer flavoprotein
PBIEDHHO_02861 3.6e-132 fadB 4.2.1.17 I Belongs to the enoyl-CoA hydratase isomerase family
PBIEDHHO_02862 2.7e-103 fadR K Transcriptional regulator
PBIEDHHO_02863 0.0 lcfA 6.2.1.3 IQ COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
PBIEDHHO_02864 5.4e-116 ywbB S Protein of unknown function (DUF2711)
PBIEDHHO_02865 4.7e-67 yshE S membrane
PBIEDHHO_02866 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PBIEDHHO_02867 0.0 polX L COG1796 DNA polymerase IV (family X)
PBIEDHHO_02868 2.3e-82 cvpA S membrane protein, required for colicin V production
PBIEDHHO_02869 2e-39 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PBIEDHHO_02870 1.5e-164 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PBIEDHHO_02871 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PBIEDHHO_02872 4e-195 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PBIEDHHO_02873 1e-128 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PBIEDHHO_02874 7.6e-32 sspI S Belongs to the SspI family
PBIEDHHO_02875 8.2e-191 ysfB KT regulator
PBIEDHHO_02876 1.1e-251 glcD 1.1.3.15 C FAD binding domain
PBIEDHHO_02877 1.4e-245 glcF C Glycolate oxidase
PBIEDHHO_02878 0.0 cstA T Carbon starvation protein
PBIEDHHO_02879 4.4e-296 abfA 3.2.1.55 GH51 G alpha-L-arabinofuranosidase activity
PBIEDHHO_02880 5.1e-140 araQ G transport system permease
PBIEDHHO_02881 9.6e-164 araP P PFAM binding-protein-dependent transport systems inner membrane component
PBIEDHHO_02882 6.2e-246 araN G carbohydrate transport
PBIEDHHO_02883 7e-212 egsA 1.1.1.261 I Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species
PBIEDHHO_02884 4e-137 araL 3.1.3.41 G Haloacid dehalogenase-like hydrolase
PBIEDHHO_02885 1.6e-131 araD 4.1.2.17, 4.2.1.109, 5.1.3.4 G COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
PBIEDHHO_02886 2.8e-307 araB 2.7.1.16 C Belongs to the ribulokinase family
PBIEDHHO_02887 1.5e-291 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
PBIEDHHO_02888 1e-184 abnA 3.2.1.99 GH43 G Belongs to the glycosyl hydrolase 43 family
PBIEDHHO_02889 4e-206 ysdC G COG1363 Cellulase M and related proteins
PBIEDHHO_02890 2.6e-62 ysdB S Sigma-w pathway protein YsdB
PBIEDHHO_02891 1e-38 ysdA S Membrane
PBIEDHHO_02892 2.7e-58 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PBIEDHHO_02893 3.1e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PBIEDHHO_02894 3.3e-86 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PBIEDHHO_02895 2.7e-107 lrgB M Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgA, with the holin-like protein CidA. The LrgAB and CidA proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses
PBIEDHHO_02896 3.6e-36 lrgA S effector of murein hydrolase LrgA
PBIEDHHO_02897 1e-128 lytT T COG3279 Response regulator of the LytR AlgR family
PBIEDHHO_02898 0.0 lytS 2.7.13.3 T Histidine kinase
PBIEDHHO_02899 4.1e-147 ysaA S HAD-hyrolase-like
PBIEDHHO_02900 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PBIEDHHO_02901 1.6e-149 ytxC S YtxC-like family
PBIEDHHO_02902 1.8e-105 ytxB S SNARE associated Golgi protein
PBIEDHHO_02903 2.9e-168 dnaI L Primosomal protein DnaI
PBIEDHHO_02904 7.7e-250 dnaB L Membrane attachment protein
PBIEDHHO_02905 4.2e-80 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PBIEDHHO_02906 1.5e-67 speH 4.1.1.50 E Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
PBIEDHHO_02907 1.3e-193 gapB 1.2.1.12, 1.2.1.59 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PBIEDHHO_02908 1.6e-64 ytcD K Transcriptional regulator
PBIEDHHO_02909 6.9e-199 ytbD EGP Major facilitator Superfamily
PBIEDHHO_02910 1.5e-155 ytbE S reductase
PBIEDHHO_02911 3.9e-94 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PBIEDHHO_02912 2.6e-104 ytaF P Probably functions as a manganese efflux pump
PBIEDHHO_02913 2.7e-154 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PBIEDHHO_02914 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PBIEDHHO_02915 2.6e-308 phoR 2.7.13.3 T Signal transduction histidine kinase
PBIEDHHO_02916 5e-128 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PBIEDHHO_02917 3.6e-171 mdh 1.1.1.37 C Catalyzes the reversible oxidation of malate to oxaloacetate
PBIEDHHO_02918 2e-241 icd 1.1.1.42 C isocitrate
PBIEDHHO_02919 8.1e-210 citZ 2.3.3.1 C Belongs to the citrate synthase family
PBIEDHHO_02920 1.5e-72 yeaL S membrane
PBIEDHHO_02921 1.8e-193 ytvI S sporulation integral membrane protein YtvI
PBIEDHHO_02922 1.1e-62 fxsA S COG3030 Protein affecting phage T7 exclusion by the F plasmid
PBIEDHHO_02923 1.2e-292 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PBIEDHHO_02924 9.8e-180 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PBIEDHHO_02925 2.4e-181 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
PBIEDHHO_02926 6e-160 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PBIEDHHO_02927 5.9e-222 ytsJ 1.1.1.38 C Malate dehydrogenase
PBIEDHHO_02928 0.0 dnaE 2.7.7.7 L DNA polymerase
PBIEDHHO_02929 3.9e-54 ytrH S Sporulation protein YtrH
PBIEDHHO_02930 5.6e-86 ytrI
PBIEDHHO_02931 6.4e-22
PBIEDHHO_02932 2.9e-176 nrnA 3.1.13.3, 3.1.3.7 S COG0618 Exopolyphosphatase-related proteins
PBIEDHHO_02933 3.8e-45 ytpI S YtpI-like protein
PBIEDHHO_02934 6.8e-238 ytoI K transcriptional regulator containing CBS domains
PBIEDHHO_02935 1.1e-127 ytkL S Belongs to the UPF0173 family
PBIEDHHO_02936 3.6e-140 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PBIEDHHO_02938 6.1e-260 argH 4.3.2.1 E argininosuccinate lyase
PBIEDHHO_02939 4.3e-233 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PBIEDHHO_02940 8e-88 moaB 2.7.7.75 H May be involved in the biosynthesis of molybdopterin
PBIEDHHO_02941 4.5e-219 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PBIEDHHO_02942 9.7e-175 ytxK 2.1.1.72 L DNA methylase
PBIEDHHO_02943 2.4e-89 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PBIEDHHO_02944 1.5e-63 ytfJ S Sporulation protein YtfJ
PBIEDHHO_02945 2.6e-97 ytfI S Protein of unknown function (DUF2953)
PBIEDHHO_02946 4.5e-80 yteJ S RDD family
PBIEDHHO_02947 1.4e-176 sppA OU signal peptide peptidase SppA
PBIEDHHO_02948 5.9e-149 nadK 2.7.1.23 G Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PBIEDHHO_02949 8.3e-301 ytcJ S amidohydrolase
PBIEDHHO_02950 9.1e-300 acsA 6.2.1.1, 6.2.1.2 I COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
PBIEDHHO_02951 6.6e-31 sspB S spore protein
PBIEDHHO_02952 1.4e-220 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PBIEDHHO_02953 3.4e-203 iscS2 2.8.1.7 E Cysteine desulfurase
PBIEDHHO_02954 6.4e-238 braB E Component of the transport system for branched-chain amino acids
PBIEDHHO_02955 2.3e-261 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PBIEDHHO_02956 4.3e-144 hisK 3.1.3.15 E COG1387 Histidinol phosphatase and related hydrolases of the PHP family
PBIEDHHO_02957 7.9e-106 yttP K Transcriptional regulator
PBIEDHHO_02958 8.6e-84 ytsP 1.8.4.14 T GAF domain-containing protein
PBIEDHHO_02959 4.6e-268 ytrP 2.7.7.65 T COG2199 FOG GGDEF domain
PBIEDHHO_02960 2.5e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PBIEDHHO_02961 5.8e-214 hmp 1.14.12.17 C Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
PBIEDHHO_02964 1.3e-08 yhbO 1.11.1.6, 3.5.1.124 S protease
PBIEDHHO_02966 2.9e-126 E GDSL-like Lipase/Acylhydrolase family
PBIEDHHO_02967 5.8e-147 fieF P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PBIEDHHO_02968 5.4e-147 K Transcriptional regulator
PBIEDHHO_02969 1.9e-119 azlC E AzlC protein
PBIEDHHO_02970 7.4e-47 azlD S Branched-chain amino acid transport protein (AzlD)
PBIEDHHO_02971 4.7e-238 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PBIEDHHO_02972 0.0 acsA 6.2.1.1 I COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
PBIEDHHO_02973 7.5e-120 acuA K Part of the acuABC operon, which is possibly involved in the breakdown of acetoin and butanediol. Acts as an acetyltransferase inactivating acetyl-CoA synthetase AcsA via acetylation at a Lys residue
PBIEDHHO_02974 3.9e-108 acuB S Domain in cystathionine beta-synthase and other proteins.
PBIEDHHO_02975 9.3e-225 acuC BQ histone deacetylase
PBIEDHHO_02976 2.7e-98 motS N Flagellar motor protein
PBIEDHHO_02977 4.8e-143 motA N flagellar motor
PBIEDHHO_02978 3.9e-179 ccpA K catabolite control protein A
PBIEDHHO_02979 1e-193 aroF 2.5.1.54, 5.4.99.5 E Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate
PBIEDHHO_02980 2.2e-43 ytxJ O Protein of unknown function (DUF2847)
PBIEDHHO_02981 1.7e-16 ytxH S COG4980 Gas vesicle protein
PBIEDHHO_02982 8.2e-14 ytxG S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PBIEDHHO_02983 7.1e-250 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PBIEDHHO_02984 0.0 sftA D Belongs to the FtsK SpoIIIE SftA family
PBIEDHHO_02985 5.9e-106 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PBIEDHHO_02986 3e-145 ytpQ S Belongs to the UPF0354 family
PBIEDHHO_02987 3.5e-57 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PBIEDHHO_02988 4.7e-76 ytoQ S Nucleoside 2-deoxyribosyltransferase YtoQ
PBIEDHHO_02989 4.1e-203 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
PBIEDHHO_02990 1.7e-51 ytzB S small secreted protein
PBIEDHHO_02991 0.0 sfcA 1.1.1.38 C Malate dehydrogenase
PBIEDHHO_02992 3.4e-160 ytnP S COG0491 Zn-dependent hydrolases, including glyoxylases
PBIEDHHO_02993 1.5e-123 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PBIEDHHO_02994 1.3e-44 ytzH S YtzH-like protein
PBIEDHHO_02995 4.1e-155 ytmP 2.7.1.89 M Phosphotransferase
PBIEDHHO_02996 2.6e-169 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PBIEDHHO_02997 5.1e-141 ytlQ
PBIEDHHO_02998 2.4e-98 ligT 3.1.4.58, 3.5.1.42 J Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
PBIEDHHO_02999 1.6e-166 ytkP 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PBIEDHHO_03000 6.2e-260 pepV 3.5.1.18 E Dipeptidase
PBIEDHHO_03001 5.5e-226 pbuO S permease
PBIEDHHO_03002 1.5e-198 ythQ U Bacterial ABC transporter protein EcsB
PBIEDHHO_03003 1.9e-116 ythP V ABC transporter
PBIEDHHO_03004 2.4e-33 ytzE K COG1349 Transcriptional regulators of sugar metabolism
PBIEDHHO_03005 2e-124 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PBIEDHHO_03006 1.5e-292 ytgP S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PBIEDHHO_03007 5.5e-231 ytfP S HI0933-like protein
PBIEDHHO_03008 1.4e-276 opuD M Belongs to the BCCT transporter (TC 2.A.15) family
PBIEDHHO_03009 2.6e-25 yteV S Sporulation protein Cse60
PBIEDHHO_03010 7.2e-181 msmR K Transcriptional regulator
PBIEDHHO_03011 4.1e-234 msmE G Bacterial extracellular solute-binding protein
PBIEDHHO_03012 5.5e-164 amyD G Binding-protein-dependent transport system inner membrane component
PBIEDHHO_03013 1.5e-141 amyC P ABC transporter (permease)
PBIEDHHO_03014 8.1e-246 melA 3.2.1.122, 3.2.1.22, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase
PBIEDHHO_03015 1.1e-73 M Acetyltransferase (GNAT) domain
PBIEDHHO_03016 1.3e-51 ytwF P Sulfurtransferase
PBIEDHHO_03017 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PBIEDHHO_03018 1.2e-52 ytvB S Protein of unknown function (DUF4257)
PBIEDHHO_03019 3.5e-135 pfyP T Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PBIEDHHO_03020 4.9e-205 yttB EGP Major facilitator Superfamily
PBIEDHHO_03021 4.2e-119 ywaF S Integral membrane protein
PBIEDHHO_03022 0.0 bceB V ABC transporter (permease)
PBIEDHHO_03023 2.7e-132 bceA V ABC transporter, ATP-binding protein
PBIEDHHO_03024 7.4e-162 T PhoQ Sensor
PBIEDHHO_03025 1.1e-121 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PBIEDHHO_03026 5.8e-199 ytrF V COG0577 ABC-type antimicrobial peptide transport system, permease component
PBIEDHHO_03027 1.1e-124 ytrE V ABC transporter, ATP-binding protein
PBIEDHHO_03028 1.1e-144
PBIEDHHO_03029 7.8e-148 P ABC-2 family transporter protein
PBIEDHHO_03030 1.9e-162 S ABC-2 family transporter protein
PBIEDHHO_03031 1.4e-156 ytrB P abc transporter atp-binding protein
PBIEDHHO_03032 4.3e-65 ytrA K GntR family transcriptional regulator
PBIEDHHO_03034 8.1e-39 ytzC S Protein of unknown function (DUF2524)
PBIEDHHO_03035 1.4e-189 yhcC S Fe-S oxidoreductase
PBIEDHHO_03036 3.4e-103 ytqB J Putative rRNA methylase
PBIEDHHO_03038 7.3e-208 ytpB 4.2.3.130 S Tetraprenyl-beta-curcumene synthase
PBIEDHHO_03039 9.5e-149 ytpA 3.1.1.5 I Alpha beta hydrolase
PBIEDHHO_03040 1.8e-55 ytoA S COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
PBIEDHHO_03041 8.5e-257 ytnA E COG1113 Gamma-aminobutyrate permease and related permeases
PBIEDHHO_03042 0.0 asnB 6.3.5.4 E Asparagine synthase
PBIEDHHO_03043 1.5e-225 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PBIEDHHO_03044 3e-303 pckA 4.1.1.49 C Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
PBIEDHHO_03045 8e-38 ytmB S Protein of unknown function (DUF2584)
PBIEDHHO_03046 2.2e-145 ytmA E COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases
PBIEDHHO_03047 1.9e-178 ytlA P COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components
PBIEDHHO_03048 1.5e-141 ytlC P ABC transporter
PBIEDHHO_03049 3.8e-124 ytlD P COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
PBIEDHHO_03050 2.8e-87 ytkD 3.6.1.55 L Belongs to the Nudix hydrolase family
PBIEDHHO_03051 1.2e-59 ytkC S Bacteriophage holin family
PBIEDHHO_03052 7.8e-76 dps P Belongs to the Dps family
PBIEDHHO_03054 6.7e-75 ytkA S YtkA-like
PBIEDHHO_03055 2.2e-87 luxS 4.4.1.21 T Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PBIEDHHO_03056 2e-38 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PBIEDHHO_03057 1.3e-102 ytiB 4.2.1.1 P Reversible hydration of carbon dioxide
PBIEDHHO_03058 7.9e-41 rpmE2 J Ribosomal protein L31
PBIEDHHO_03059 1.2e-239 cydA 1.10.3.14 C oxidase, subunit
PBIEDHHO_03060 1.9e-181 cydB 1.10.3.14 C COG1294 Cytochrome bd-type quinol oxidase, subunit 2
PBIEDHHO_03061 4e-24 S Domain of Unknown Function (DUF1540)
PBIEDHHO_03062 2e-208 menC 4.2.1.113 H Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)
PBIEDHHO_03063 1.7e-268 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
PBIEDHHO_03064 7.9e-154 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PBIEDHHO_03065 1.9e-147 menH 4.2.99.20 S Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC)
PBIEDHHO_03066 0.0 menD 2.2.1.9 H Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
PBIEDHHO_03067 3.7e-260 menF 5.4.4.2 HQ Isochorismate synthase
PBIEDHHO_03068 2.3e-125 dksA T COG1734 DnaK suppressor protein
PBIEDHHO_03069 4.8e-71 tspO T membrane
PBIEDHHO_03078 7.8e-08
PBIEDHHO_03079 1.3e-09
PBIEDHHO_03086 1.6e-08
PBIEDHHO_03091 2.2e-38 S COG NOG14552 non supervised orthologous group
PBIEDHHO_03092 2.7e-92 thiT S Thiamine transporter protein (Thia_YuaJ)
PBIEDHHO_03093 6.1e-176 yuaG 3.4.21.72 S protein conserved in bacteria
PBIEDHHO_03094 2.6e-81 yuaF OU Membrane protein implicated in regulation of membrane protease activity
PBIEDHHO_03095 2.2e-79 yuaE S DinB superfamily
PBIEDHHO_03096 1.2e-103 yuaD S MOSC domain
PBIEDHHO_03097 6.7e-226 gbsB 1.1.1.1 C alcohol dehydrogenase
PBIEDHHO_03098 2.3e-281 gbsA 1.2.1.8 C Belongs to the aldehyde dehydrogenase family
PBIEDHHO_03099 3.4e-92 yuaC K Belongs to the GbsR family
PBIEDHHO_03100 4.3e-92 yuaB
PBIEDHHO_03101 4.8e-117 ktrA P COG0569 K transport systems, NAD-binding component
PBIEDHHO_03102 9.3e-142 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PBIEDHHO_03103 5.2e-207 hmp 1.14.12.17 C Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
PBIEDHHO_03104 1.7e-36 G Cupin
PBIEDHHO_03105 1.1e-42 yjcN
PBIEDHHO_03108 2.4e-132 S Aspartate phosphatase response regulator
PBIEDHHO_03109 4e-14
PBIEDHHO_03111 2.8e-143 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PBIEDHHO_03112 5.5e-193 yubA S transporter activity
PBIEDHHO_03113 9.1e-181 ygjR S Oxidoreductase
PBIEDHHO_03114 1.5e-97 pfpI 1.11.1.6, 3.5.1.124 S DJ-1/PfpI family
PBIEDHHO_03115 5.3e-228 mcpA NT chemotaxis protein
PBIEDHHO_03116 6.9e-220 mcpA NT chemotaxis protein
PBIEDHHO_03117 1.3e-213 mcpA NT chemotaxis protein
PBIEDHHO_03118 5.5e-209 mcpA NT chemotaxis protein
PBIEDHHO_03119 3.3e-135 tgl 2.3.2.13 S protein-glutamine gamma-glutamyltransferase activity
PBIEDHHO_03120 5.8e-39
PBIEDHHO_03121 3.6e-186 yrpB 1.13.12.16 S COG2070 Dioxygenases related to 2-nitropropane dioxygenase
PBIEDHHO_03122 0.0 yugT 3.2.1.10, 3.2.1.20 GH13,GH31 G COG0366 Glycosidases
PBIEDHHO_03123 8.1e-230 yugS S COG1253 Hemolysins and related proteins containing CBS domains
PBIEDHHO_03124 4.1e-116 yugP S Zn-dependent protease
PBIEDHHO_03125 6.5e-17
PBIEDHHO_03126 1e-27 mstX S Membrane-integrating protein Mistic
PBIEDHHO_03127 1.6e-177 yugO P COG1226 Kef-type K transport systems
PBIEDHHO_03128 5e-69 yugN S YugN-like family
PBIEDHHO_03130 1.9e-258 pgi 5.3.1.9 G Belongs to the GPI family
PBIEDHHO_03131 5.8e-227 yugK C Dehydrogenase
PBIEDHHO_03132 1e-223 yugJ C oxidoreductases, Fe-dependent alcohol dehydrogenase family
PBIEDHHO_03133 6.8e-34 yuzA S Domain of unknown function (DUF378)
PBIEDHHO_03134 2.9e-61 yugI 5.3.1.9 J RNA binding protein (contains ribosomal protein S1 domain)
PBIEDHHO_03135 3e-207 yugH 2.6.1.1 E Aminotransferase
PBIEDHHO_03136 5.8e-83 alaR K Transcriptional regulator
PBIEDHHO_03137 2e-149 yugF I Hydrolase
PBIEDHHO_03138 5e-38 yugE S Domain of unknown function (DUF1871)
PBIEDHHO_03139 9.9e-219 patB 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PBIEDHHO_03140 2.9e-219 T PhoQ Sensor
PBIEDHHO_03141 7.4e-62 kapB G Kinase associated protein B
PBIEDHHO_03142 1.6e-115 kapD L the KinA pathway to sporulation
PBIEDHHO_03143 1.5e-165 yuxJ EGP Major facilitator Superfamily
PBIEDHHO_03144 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Penicillin-binding Protein
PBIEDHHO_03145 1e-69 yuxK S protein conserved in bacteria
PBIEDHHO_03146 1.1e-71 yufK S Family of unknown function (DUF5366)
PBIEDHHO_03147 4.2e-292 dcuS 2.7.13.3 T Signal transduction histidine kinase regulating citrate malate metabolism
PBIEDHHO_03148 8.7e-125 dcuR T COG4565 Response regulator of citrate malate metabolism
PBIEDHHO_03149 5.1e-193 tcsA S ABC-type transport system, periplasmic component surface lipoprotein
PBIEDHHO_03150 1.7e-279 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
PBIEDHHO_03151 7.4e-181 yufP S Belongs to the binding-protein-dependent transport system permease family
PBIEDHHO_03152 6.6e-168 yufQ S Belongs to the binding-protein-dependent transport system permease family
PBIEDHHO_03153 9.8e-11
PBIEDHHO_03154 0.0 phaA 1.6.5.3 CP COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit
PBIEDHHO_03155 6.6e-67 mrpB P Subunit B of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PBIEDHHO_03156 2.2e-49 phaC 1.6.5.3 P Subunit C of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PBIEDHHO_03157 7.4e-259 mrpD CP Subunit D of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PBIEDHHO_03158 5.5e-75 mrpE P Subunit E of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PBIEDHHO_03159 1.4e-36 phaF P Subunit F of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PBIEDHHO_03160 9.7e-59 phaG P COG1320 Multisubunit Na H antiporter, MnhG subunit
PBIEDHHO_03161 2.6e-59 ydiI Q protein, possibly involved in aromatic compounds catabolism
PBIEDHHO_03162 6.9e-113 comA K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PBIEDHHO_03163 4.2e-253 comP 2.7.13.3 T Histidine kinase
PBIEDHHO_03165 2.9e-61 comQ H Belongs to the FPP GGPP synthase family
PBIEDHHO_03167 1.6e-47 yuzC
PBIEDHHO_03168 8.2e-224 yuxH 3.1.4.52 T signal transduction protein containing EAL and modified HD-GYP domains
PBIEDHHO_03169 1.7e-279 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PBIEDHHO_03170 3e-101 pncA Q COG1335 Amidases related to nicotinamidase
PBIEDHHO_03171 1.1e-65 yueI S Protein of unknown function (DUF1694)
PBIEDHHO_03172 4.8e-38 yueH S YueH-like protein
PBIEDHHO_03173 7.1e-33 yueG S Spore germination protein gerPA/gerPF
PBIEDHHO_03174 1.9e-182 yueF S transporter activity
PBIEDHHO_03175 1.6e-22 S Protein of unknown function (DUF2642)
PBIEDHHO_03176 2.4e-95 yueE S phosphohydrolase
PBIEDHHO_03177 3.4e-124 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PBIEDHHO_03178 2.7e-74 yueC S Family of unknown function (DUF5383)
PBIEDHHO_03179 0.0 esaA S type VII secretion protein EsaA
PBIEDHHO_03180 0.0 essC D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
PBIEDHHO_03181 6.3e-198 essB S WXG100 protein secretion system (Wss), protein YukC
PBIEDHHO_03182 9.6e-39 yukD S WXG100 protein secretion system (Wss), protein YukD
PBIEDHHO_03183 1.7e-45 esxA S Belongs to the WXG100 family
PBIEDHHO_03184 6.8e-226 yukF QT Transcriptional regulator
PBIEDHHO_03185 1.3e-202 ald 1.4.1.1 E Belongs to the AlaDH PNT family
PBIEDHHO_03186 1.9e-129 yukJ S Uncharacterized conserved protein (DUF2278)
PBIEDHHO_03187 1.7e-31 mbtH S MbtH-like protein
PBIEDHHO_03188 0.0 dhbF Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PBIEDHHO_03189 2.3e-162 entB 3.3.2.1, 6.3.2.14 Q Isochorismatase family
PBIEDHHO_03190 3.6e-307 entE 2.7.7.58, 6.3.2.14 Q 2,3-dihydroxybenzoate-AMP ligase
PBIEDHHO_03191 5.8e-214 entC 5.4.4.2 HQ Isochorismate synthase
PBIEDHHO_03192 2.2e-129 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PBIEDHHO_03193 8.9e-156 besA S Putative esterase
PBIEDHHO_03194 3e-118 yuiH S Oxidoreductase molybdopterin binding domain
PBIEDHHO_03195 1.2e-100 bioY S Biotin biosynthesis protein
PBIEDHHO_03196 1.5e-207 yuiF S antiporter
PBIEDHHO_03197 1.2e-277 pepA 3.4.11.1, 3.4.11.5 E Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
PBIEDHHO_03198 6.5e-76 yuiD S protein conserved in bacteria
PBIEDHHO_03199 1.3e-114 yuiC S protein conserved in bacteria
PBIEDHHO_03200 4.9e-27 yuiB S Putative membrane protein
PBIEDHHO_03201 1.1e-233 yumB 1.6.99.3 C NADH dehydrogenase
PBIEDHHO_03202 1.8e-184 yumC 1.18.1.2, 1.19.1.1 C reductase
PBIEDHHO_03204 3e-184 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PBIEDHHO_03205 2e-27
PBIEDHHO_03206 8e-67 CP Membrane
PBIEDHHO_03207 3.5e-118 V ABC transporter
PBIEDHHO_03209 5.4e-32 S Bacteriocin class IId cyclical uberolysin-like
PBIEDHHO_03211 6.6e-42 rimJ 2.3.1.128 J Alanine acetyltransferase
PBIEDHHO_03212 1.3e-129 dltE M Belongs to the short-chain dehydrogenases reductases (SDR) family
PBIEDHHO_03213 2.6e-61 erpA S Belongs to the HesB IscA family
PBIEDHHO_03214 3.8e-159 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PBIEDHHO_03215 3.6e-203 yutK F Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PBIEDHHO_03216 1.7e-37 yuzB S Belongs to the UPF0349 family
PBIEDHHO_03217 5.7e-205 yutJ 1.6.99.3 C NADH dehydrogenase
PBIEDHHO_03218 4.1e-53 yuzD S protein conserved in bacteria
PBIEDHHO_03219 1.6e-35 yutI O COG0694 Thioredoxin-like proteins and domains
PBIEDHHO_03220 0.0 yuxL 3.4.14.5, 3.4.19.1 EU peptidase
PBIEDHHO_03221 3.1e-162 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PBIEDHHO_03222 4.5e-194 thrC 4.2.3.1 E Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
PBIEDHHO_03223 5.1e-240 hom 1.1.1.3 E homoserine dehydrogenase
PBIEDHHO_03224 6.3e-193 yutH S Spore coat protein
PBIEDHHO_03225 5.2e-84 pgpA 3.1.3.27 I COG1267 Phosphatidylglycerophosphatase A and related proteins
PBIEDHHO_03226 7.9e-140 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PBIEDHHO_03227 8.9e-72 yutE S Protein of unknown function DUF86
PBIEDHHO_03228 1.7e-47 yutD S protein conserved in bacteria
PBIEDHHO_03229 8e-168 lipA 2.8.1.8 H Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
PBIEDHHO_03230 2.5e-191 lytH M Peptidase, M23
PBIEDHHO_03231 1.1e-128 yunB S Sporulation protein YunB (Spo_YunB)
PBIEDHHO_03232 1.2e-255 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PBIEDHHO_03233 4.8e-143 yunE S membrane transporter protein
PBIEDHHO_03234 9.9e-168 yunF S Protein of unknown function DUF72
PBIEDHHO_03235 2.1e-55 3.1.3.18, 3.8.1.2 S phosphoglycolate phosphatase activity
PBIEDHHO_03236 2.7e-252 allB 3.5.2.5 F Catalyzes the conversion of allantoin (5- ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring
PBIEDHHO_03237 1.7e-293 pucR QT COG2508 Regulator of polyketide synthase expression
PBIEDHHO_03238 2.8e-65
PBIEDHHO_03239 2.4e-207 blt EGP Major facilitator Superfamily
PBIEDHHO_03240 1.2e-225 pucG 2.6.1.112, 2.6.1.44, 2.6.1.45, 2.6.1.51 E COG0075 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase
PBIEDHHO_03241 6.4e-224 pucF 3.5.1.6, 3.5.1.87, 3.5.3.9 E COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases
PBIEDHHO_03242 3.7e-162 bsn L Ribonuclease
PBIEDHHO_03243 7e-198 msmX P Belongs to the ABC transporter superfamily
PBIEDHHO_03244 1.5e-132 yurK K UTRA
PBIEDHHO_03245 2.5e-158 yurL 2.7.1.218 G pfkB family carbohydrate kinase
PBIEDHHO_03246 2.4e-156 yurM P COG0395 ABC-type sugar transport system, permease component
PBIEDHHO_03247 2.2e-157 yurN G Binding-protein-dependent transport system inner membrane component
PBIEDHHO_03248 2.1e-238 yurO G COG1653 ABC-type sugar transport system, periplasmic component
PBIEDHHO_03249 5.3e-181 frlB M Catalyzes the conversion of a range of fructosamine 6- phosphates to glucose 6-phosphate and a free amino acid
PBIEDHHO_03250 8.3e-160 K helix_turn_helix, mercury resistance
PBIEDHHO_03251 1e-14
PBIEDHHO_03252 2.4e-77
PBIEDHHO_03253 3.5e-22 S Sporulation delaying protein SdpA
PBIEDHHO_03255 2.6e-64 yurQ 2.7.7.7 L COG0322 Nuclease subunit of the excinuclease complex
PBIEDHHO_03256 3.5e-197 yurR 1.4.5.1 E COG0665 Glycine D-amino acid oxidases (deaminating)
PBIEDHHO_03257 3.4e-101 Q ubiE/COQ5 methyltransferase family
PBIEDHHO_03258 1.1e-72 yncE S Protein of unknown function (DUF2691)
PBIEDHHO_03259 1.9e-150 csn 3.2.1.132 M Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan
PBIEDHHO_03260 5.7e-48
PBIEDHHO_03262 1.3e-70 xlyA 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
PBIEDHHO_03263 1.9e-58 S Pfam:Phage_holin_4_1
PBIEDHHO_03266 2.8e-141 S Domain of unknown function (DUF2479)
PBIEDHHO_03267 0.0 M Pectate lyase superfamily protein
PBIEDHHO_03268 1.4e-261 NU Prophage endopeptidase tail
PBIEDHHO_03269 2.7e-117 S Phage tail protein
PBIEDHHO_03270 0.0 D Phage tail tape measure protein
PBIEDHHO_03272 1.4e-32 S Phage tail tube protein
PBIEDHHO_03273 4.8e-08
PBIEDHHO_03274 1.1e-31 S Bacteriophage HK97-gp10, putative tail-component
PBIEDHHO_03275 4.9e-30 S Phage head-tail joining protein
PBIEDHHO_03276 1.7e-21 S Phage gp6-like head-tail connector protein
PBIEDHHO_03277 1.1e-19
PBIEDHHO_03278 1.5e-129 S capsid protein
PBIEDHHO_03279 2e-74 pi136 S Caudovirus prohead serine protease
PBIEDHHO_03280 5.4e-175 S portal protein
PBIEDHHO_03282 8.4e-150 terL S Terminase
PBIEDHHO_03283 2.1e-56 terS L Terminase, small subunit
PBIEDHHO_03285 1.7e-47
PBIEDHHO_03286 2e-226 KL SNF2 family N-terminal domain
PBIEDHHO_03287 3e-19 S VRR_NUC
PBIEDHHO_03288 0.0 L Virulence-associated protein E
PBIEDHHO_03289 1.4e-11 S Protein of unknown function (DUF2815)
PBIEDHHO_03290 5.3e-104 ydiP 2.1.1.37 H Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
PBIEDHHO_03292 2.8e-298 2.7.7.7 L DNA polymerase A domain
PBIEDHHO_03293 2.8e-22
PBIEDHHO_03294 1.8e-80 S Protein of unknown function (DUF2815)
PBIEDHHO_03295 2.1e-160 L Protein of unknown function (DUF2800)
PBIEDHHO_03296 1.2e-11
PBIEDHHO_03297 2.1e-43
PBIEDHHO_03299 9.5e-32 S Uncharacterized protein YqaH
PBIEDHHO_03301 8.9e-30
PBIEDHHO_03302 4.9e-19
PBIEDHHO_03303 1.9e-53 K Cro/C1-type HTH DNA-binding domain
PBIEDHHO_03304 1.9e-55 E IrrE N-terminal-like domain
PBIEDHHO_03305 3e-151 S Pfam:Arm-DNA-bind_4
PBIEDHHO_03306 8.7e-270 sufB O FeS cluster assembly
PBIEDHHO_03307 8.5e-78 nifU C COG0822 NifU homolog involved in Fe-S cluster formation
PBIEDHHO_03308 2.8e-232 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PBIEDHHO_03309 7e-245 sufD O assembly protein SufD
PBIEDHHO_03310 2.3e-142 sufC O COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component
PBIEDHHO_03311 6.7e-09
PBIEDHHO_03312 1.1e-62 yurZ 2.3.1.12, 4.1.1.44 S Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
PBIEDHHO_03313 4e-142 metQ P Belongs to the NlpA lipoprotein family
PBIEDHHO_03314 8.3e-93 metI P COG2011 ABC-type metal ion transport system, permease component
PBIEDHHO_03315 1.1e-184 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PBIEDHHO_03316 2.1e-55 yusD S SCP-2 sterol transfer family
PBIEDHHO_03317 5.2e-53 yusE CO Thioredoxin
PBIEDHHO_03318 1.3e-60 rnmV 3.1.26.8 L COG1658 Small primase-like proteins (Toprim domain)
PBIEDHHO_03319 2.1e-38 yusG S Protein of unknown function (DUF2553)
PBIEDHHO_03320 5.5e-65 gcvH E Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate
PBIEDHHO_03321 1.8e-62 arsC 1.20.4.1 P Belongs to the ArsC family
PBIEDHHO_03322 0.0 fadE 1.3.8.1 I acyl-CoA dehydrogenase
PBIEDHHO_03323 1e-215 fadA 2.3.1.16 I Belongs to the thiolase family
PBIEDHHO_03324 0.0 fadB 1.1.1.35, 4.2.1.17, 5.1.2.3 I 3-hydroxyacyl-CoA dehydrogenase
PBIEDHHO_03326 3e-148 fadM E Proline dehydrogenase
PBIEDHHO_03327 3.5e-39
PBIEDHHO_03328 1.3e-51 yusN M Coat F domain
PBIEDHHO_03329 4.5e-66 yusO K Iron dependent repressor, N-terminal DNA binding domain
PBIEDHHO_03330 5.4e-284 yusP P Major facilitator superfamily
PBIEDHHO_03331 9.8e-59 L PFAM Restriction endonuclease BamHI
PBIEDHHO_03332 1.8e-16 K Helix-turn-helix XRE-family like proteins
PBIEDHHO_03333 2.2e-126 2.1.1.72 L DNA methylase
PBIEDHHO_03334 8.1e-38 yusU S Protein of unknown function (DUF2573)
PBIEDHHO_03335 3.1e-150 yusV 3.6.3.34 HP ABC transporter
PBIEDHHO_03336 1e-46 S YusW-like protein
PBIEDHHO_03337 0.0 pepF2 E COG1164 Oligoendopeptidase F
PBIEDHHO_03338 3.6e-138 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PBIEDHHO_03339 1.5e-77 dps P Belongs to the Dps family
PBIEDHHO_03340 3.5e-231 htrA 3.4.21.107 O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PBIEDHHO_03341 1.6e-123 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PBIEDHHO_03342 6.3e-249 cssS 2.7.13.3 T PhoQ Sensor
PBIEDHHO_03343 1.3e-23
PBIEDHHO_03344 3e-154 yuxN K Transcriptional regulator
PBIEDHHO_03345 7.3e-261 fumC 1.1.1.38, 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PBIEDHHO_03346 6.6e-24 S Protein of unknown function (DUF3970)
PBIEDHHO_03347 1.1e-254 gerAA EG Spore germination protein
PBIEDHHO_03348 4.6e-181 gerAB E Spore germination protein
PBIEDHHO_03349 2.8e-79 gerAC S Spore germination B3/ GerAC like, C-terminal
PBIEDHHO_03350 1.9e-95 gerAC S Spore germination B3/ GerAC like, C-terminal
PBIEDHHO_03351 5.6e-107 vraR KT COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PBIEDHHO_03352 1.1e-192 vraS 2.7.13.3 T Histidine kinase
PBIEDHHO_03353 4.4e-124 yvqF S Cell wall-active antibiotics response 4TMS YvqF
PBIEDHHO_03354 2.1e-117 liaG S Putative adhesin
PBIEDHHO_03355 8.7e-90 liaH KT COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription
PBIEDHHO_03356 6.9e-44 liaI S membrane
PBIEDHHO_03357 1.2e-220 yvqJ EGP Major facilitator Superfamily
PBIEDHHO_03358 2.3e-96 yvqK 2.5.1.17 S Adenosyltransferase
PBIEDHHO_03359 3.1e-202 yvrA 3.6.3.34 HP COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
PBIEDHHO_03360 1.4e-176 btuC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PBIEDHHO_03361 1.1e-164 yvrC P ABC transporter substrate-binding protein
PBIEDHHO_03362 1e-137 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PBIEDHHO_03363 4.3e-166 yvrE G SMP-30/Gluconolaconase/LRE-like region
PBIEDHHO_03364 0.0 T PhoQ Sensor
PBIEDHHO_03365 5.7e-132 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PBIEDHHO_03366 6.2e-35
PBIEDHHO_03367 2.1e-100 yvrI K RNA polymerase
PBIEDHHO_03368 1.6e-15 S YvrJ protein family
PBIEDHHO_03369 3.3e-230 oxdC 4.1.1.2 G Oxalate decarboxylase
PBIEDHHO_03370 9.9e-60 yvrL S Regulatory protein YrvL
PBIEDHHO_03371 4.5e-146 fhuC 3.6.3.34 HP ABC transporter
PBIEDHHO_03372 1.4e-168 fhuG P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PBIEDHHO_03373 1.5e-181 fhuB P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PBIEDHHO_03374 5.8e-177 fhuD P ABC transporter
PBIEDHHO_03375 4e-122 Q Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
PBIEDHHO_03376 3e-233 yvsH E Arginine ornithine antiporter
PBIEDHHO_03377 5.2e-13 S Small spore protein J (Spore_SspJ)
PBIEDHHO_03378 3e-84 yvsG S LexA-binding, inner membrane-associated putative hydrolase
PBIEDHHO_03379 3e-166 ltaS 2.7.8.20 M Belongs to the LTA synthase family
PBIEDHHO_03380 3.5e-163 ltaS 2.7.8.20 M Belongs to the LTA synthase family
PBIEDHHO_03381 5.4e-159 yvgK P COG1910 Periplasmic molybdate-binding protein domain
PBIEDHHO_03382 4.2e-136 modA P COG0725 ABC-type molybdate transport system, periplasmic component
PBIEDHHO_03383 1.6e-90 modB P COG4149 ABC-type molybdate transport system, permease component
PBIEDHHO_03384 3.3e-113 yfiK K Regulator
PBIEDHHO_03385 5.6e-171 T Histidine kinase
PBIEDHHO_03386 6.8e-170 yfiL V COG1131 ABC-type multidrug transport system, ATPase component
PBIEDHHO_03387 3e-185 yfiM V ABC-2 type transporter
PBIEDHHO_03388 4.7e-173 yfiN V COG0842 ABC-type multidrug transport system, permease component
PBIEDHHO_03389 3.6e-154 yvgN S reductase
PBIEDHHO_03390 6.6e-84 yvgO
PBIEDHHO_03391 0.0 yjcE P COG0025 NhaP-type Na H and K H antiporters
PBIEDHHO_03392 0.0 cysI 1.7.7.1, 1.8.1.2, 1.8.7.1 P Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate
PBIEDHHO_03393 0.0 cysJ 1.8.1.2 P Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
PBIEDHHO_03394 0.0 helD 3.6.4.12 L DNA helicase
PBIEDHHO_03395 5.4e-99 yvgT S membrane
PBIEDHHO_03396 1.6e-138 S Metallo-peptidase family M12
PBIEDHHO_03397 6.6e-72 bdbC O Required for disulfide bond formation in some proteins
PBIEDHHO_03398 1.7e-98 bdbD O Thioredoxin
PBIEDHHO_03399 0.0 cadA 3.6.3.3, 3.6.3.5 P COG2217 Cation transport ATPase
PBIEDHHO_03400 0.0 copA 3.6.3.54 P P-type ATPase
PBIEDHHO_03401 4.9e-28 copZ P Heavy-metal-associated domain
PBIEDHHO_03402 7.6e-46 csoR S transcriptional
PBIEDHHO_03403 6.6e-190 yvaA 1.1.1.371 S Oxidoreductase
PBIEDHHO_03404 2.4e-118 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PBIEDHHO_03405 2.4e-245 moxC C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PBIEDHHO_03406 2e-43 ytnI O COG0695 Glutaredoxin and related proteins
PBIEDHHO_03407 9.3e-173 ytmO C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PBIEDHHO_03408 5.2e-139 tcyN 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
PBIEDHHO_03409 1.9e-116 tcyM U Binding-protein-dependent transport system inner membrane component
PBIEDHHO_03410 8e-118 tcyL P Binding-protein-dependent transport system inner membrane component
PBIEDHHO_03411 2e-55 tcyK M Bacterial periplasmic substrate-binding proteins
PBIEDHHO_03412 6.1e-69 tcyK M Bacterial periplasmic substrate-binding proteins
PBIEDHHO_03413 2.1e-127 ytmJ ET Bacterial periplasmic substrate-binding proteins
PBIEDHHO_03414 5.7e-100 ytmI K Acetyltransferase (GNAT) domain
PBIEDHHO_03415 1e-159 ytlI K LysR substrate binding domain
PBIEDHHO_03416 2.2e-137 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PBIEDHHO_03417 1.1e-41 yrdF K ribonuclease inhibitor
PBIEDHHO_03419 1.6e-82 smpB O Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
PBIEDHHO_03420 0.0 rnr K 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PBIEDHHO_03421 1.6e-142 est 3.1.1.1 S Carboxylesterase
PBIEDHHO_03422 4.2e-20 secG U Preprotein translocase subunit SecG
PBIEDHHO_03423 6e-35 yvzC K Transcriptional
PBIEDHHO_03424 1.6e-67 K transcriptional
PBIEDHHO_03425 9.2e-69 yvaO K Cro/C1-type HTH DNA-binding domain
PBIEDHHO_03426 1.4e-50 yodB K transcriptional
PBIEDHHO_03427 5.5e-240 T His Kinase A (phosphoacceptor) domain
PBIEDHHO_03428 1.3e-119 K Transcriptional regulatory protein, C terminal
PBIEDHHO_03429 6.8e-131 mutG S ABC-2 family transporter protein
PBIEDHHO_03430 1e-120 spaE S ABC-2 family transporter protein
PBIEDHHO_03431 1.6e-123 mutF V ABC transporter, ATP-binding protein
PBIEDHHO_03432 4.4e-110 opuCD P COG1174 ABC-type proline glycine betaine transport systems, permease component
PBIEDHHO_03433 8.2e-168 opuCC M COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PBIEDHHO_03434 4.7e-109 opuCB P COG1174 ABC-type proline glycine betaine transport systems, permease component
PBIEDHHO_03435 2.1e-205 opuCA 3.6.3.32 E COG1125 ABC-type proline glycine betaine transport systems, ATPase components
PBIEDHHO_03436 1.7e-56 yvbF K Belongs to the GbsR family
PBIEDHHO_03437 4.1e-108 opuCD P COG1174 ABC-type proline glycine betaine transport systems, permease component
PBIEDHHO_03438 7.4e-169 opuCC M COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PBIEDHHO_03439 8.6e-111 opuCB P COG1174 ABC-type proline glycine betaine transport systems, permease component
PBIEDHHO_03440 9.7e-211 opuCA 3.6.3.32 E COG1125 ABC-type proline glycine betaine transport systems, ATPase components
PBIEDHHO_03441 2.8e-94 yvbF K Belongs to the GbsR family
PBIEDHHO_03442 4.4e-104 yvbG U UPF0056 membrane protein
PBIEDHHO_03443 2.6e-113 exoY M Membrane
PBIEDHHO_03444 0.0 tcaA S response to antibiotic
PBIEDHHO_03445 1.4e-78 yvbK 3.1.3.25 K acetyltransferase
PBIEDHHO_03446 7.8e-206 EGP Major facilitator Superfamily
PBIEDHHO_03447 4.2e-172
PBIEDHHO_03448 2e-123 S GlcNAc-PI de-N-acetylase
PBIEDHHO_03449 2.4e-141 C WbqC-like protein family
PBIEDHHO_03450 8.3e-141 M Protein involved in cellulose biosynthesis
PBIEDHHO_03451 1.3e-219 E UDP-4-amino-4-deoxy-L-arabinose aminotransferase
PBIEDHHO_03452 1.4e-167 5.1.3.2 M GDP-mannose 4,6 dehydratase
PBIEDHHO_03453 7.6e-216 spsC 2.6.1.102 E Belongs to the DegT DnrJ EryC1 family
PBIEDHHO_03454 9.5e-250 1.1.1.136 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PBIEDHHO_03455 7.3e-223 ywaD 3.4.11.10, 3.4.11.6 S PA domain
PBIEDHHO_03456 6.4e-243 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PBIEDHHO_03457 6.3e-298 gpmI 5.4.2.12 G Catalyzes the interconversion of 2-phosphoglycerate and
PBIEDHHO_03458 5.6e-138 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PBIEDHHO_03459 1.6e-216 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PBIEDHHO_03460 2.1e-185 gapA 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PBIEDHHO_03461 8.3e-185 cggR K COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
PBIEDHHO_03462 2.3e-31 araE EGP Major facilitator Superfamily
PBIEDHHO_03463 1.7e-208 araE EGP Major facilitator Superfamily
PBIEDHHO_03464 7.4e-200 araR K transcriptional
PBIEDHHO_03465 1.2e-188 yvbT C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PBIEDHHO_03466 8.4e-125 yvbU K Transcriptional regulator
PBIEDHHO_03467 2.8e-152 yvbV EG EamA-like transporter family
PBIEDHHO_03468 3.2e-213 yvbW E COG1113 Gamma-aminobutyrate permease and related permeases
PBIEDHHO_03470 6.7e-148 ybbH_1 K RpiR family transcriptional regulator
PBIEDHHO_03471 6.6e-295 gntK 2.7.1.12, 2.7.1.17, 2.7.1.189 G Belongs to the FGGY kinase family
PBIEDHHO_03472 2.3e-219 gntP EG COG2610 H gluconate symporter and related permeases
PBIEDHHO_03473 3.5e-129 lutC S Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
PBIEDHHO_03474 1.7e-265 lutB C Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate
PBIEDHHO_03475 1.8e-133 lutA C Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
PBIEDHHO_03476 7.3e-136 EK COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PBIEDHHO_03477 4.6e-61 EK COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PBIEDHHO_03478 1.4e-117 yvfI K COG2186 Transcriptional regulators
PBIEDHHO_03479 3.8e-296 yvfH C L-lactate permease
PBIEDHHO_03480 8.8e-232 rpoN K COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog
PBIEDHHO_03481 2.7e-32 yvfG S YvfG protein
PBIEDHHO_03482 2.3e-176 yvfF GM Exopolysaccharide biosynthesis protein
PBIEDHHO_03483 2.7e-216 epsN 2.6.1.102 E Belongs to the DegT DnrJ EryC1 family
PBIEDHHO_03484 1.1e-49 epsM GM COG0110 Acetyltransferase (isoleucine patch superfamily)
PBIEDHHO_03485 1.8e-102 epsL M COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PBIEDHHO_03486 5.2e-268 pglK S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PBIEDHHO_03487 2e-186 epsJ GT2 S COG0463 Glycosyltransferases involved in cell wall biogenesis
PBIEDHHO_03488 2e-197 epsI GM pyruvyl transferase
PBIEDHHO_03489 4.6e-191 epsH GT2 S Glycosyltransferase like family 2
PBIEDHHO_03490 1.4e-201 epsG S EpsG family
PBIEDHHO_03491 3.8e-199 epsF GT4 M Glycosyl transferases group 1
PBIEDHHO_03492 8.6e-156 epsE GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
PBIEDHHO_03493 3.6e-213 epsD GT4 M Glycosyl transferase 4-like
PBIEDHHO_03494 0.0 pglF 4.2.1.115, 4.2.1.135, 4.2.1.46 GM Polysaccharide biosynthesis protein
PBIEDHHO_03495 5.4e-116 epsB 2.7.10.2 D COG0489 ATPases involved in chromosome partitioning
PBIEDHHO_03496 3.3e-116 ywqC M biosynthesis protein
PBIEDHHO_03497 5.1e-78 slr K transcriptional
PBIEDHHO_03498 6.5e-236 pnbA CE10 I Belongs to the type-B carboxylesterase lipase family
PBIEDHHO_03500 1.3e-85 ywjB H RibD C-terminal domain
PBIEDHHO_03501 1.7e-130 CH FAD binding domain
PBIEDHHO_03502 9.3e-74 S Metallo-beta-lactamase superfamily
PBIEDHHO_03503 3e-105 yyaS S Membrane
PBIEDHHO_03504 1e-82 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PBIEDHHO_03505 1.2e-93 padC Q Phenolic acid decarboxylase
PBIEDHHO_03506 9.4e-50 MA20_18690 S Protein of unknown function (DUF3237)
PBIEDHHO_03507 6.1e-31 S Protein of unknown function (DUF1433)
PBIEDHHO_03508 5e-17 S Protein of unknown function (DUF1433)
PBIEDHHO_03509 4.8e-19 S Protein of unknown function (DUF1433)
PBIEDHHO_03510 5.8e-253 I Pfam Lipase (class 3)
PBIEDHHO_03511 7.6e-33
PBIEDHHO_03513 1.8e-278 cscA 3.2.1.26, 3.2.1.65 GH32 G invertase
PBIEDHHO_03514 7.8e-214 rafB P LacY proton/sugar symporter
PBIEDHHO_03515 1.6e-177 scrR K transcriptional
PBIEDHHO_03516 2.4e-104 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PBIEDHHO_03517 7.2e-158 yraN K Transcriptional regulator
PBIEDHHO_03518 3.7e-202 yraM S PrpF protein
PBIEDHHO_03519 8.3e-241 EGP Sugar (and other) transporter
PBIEDHHO_03520 5.3e-89
PBIEDHHO_03521 1.9e-101 yvdD 3.2.2.10 S Belongs to the LOG family
PBIEDHHO_03522 7.1e-50 yvdC S MazG nucleotide pyrophosphohydrolase domain
PBIEDHHO_03523 6.4e-277 sulP P COG0659 Sulfate permease and related transporters (MFS superfamily)
PBIEDHHO_03524 4.1e-104 ytiB 4.2.1.1 P Reversible hydration of carbon dioxide
PBIEDHHO_03525 2.9e-179 ghrB 1.1.1.215, 1.1.1.26, 1.1.1.43, 1.1.1.79, 1.1.1.81 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PBIEDHHO_03526 1.3e-76 M Ribonuclease
PBIEDHHO_03527 1.5e-130 nhoA 2.3.1.118 Q Belongs to the arylamine N-acetyltransferase family
PBIEDHHO_03528 1.4e-35 crh G Phosphocarrier protein Chr
PBIEDHHO_03529 3.1e-170 whiA K May be required for sporulation
PBIEDHHO_03530 9.4e-175 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PBIEDHHO_03531 2.2e-165 rapZ S Displays ATPase and GTPase activities
PBIEDHHO_03532 2.5e-86 yvcI 3.6.1.55 F COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
PBIEDHHO_03533 9.4e-175 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PBIEDHHO_03534 3.3e-118 usp CBM50 M protein conserved in bacteria
PBIEDHHO_03535 4.2e-267 S COG0457 FOG TPR repeat
PBIEDHHO_03536 6.8e-182 sasA T Histidine kinase
PBIEDHHO_03537 4.4e-118 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PBIEDHHO_03538 0.0 msbA2 3.6.3.44 V ABC transporter
PBIEDHHO_03539 2.2e-108 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E belongs to the PRA-CH family
PBIEDHHO_03540 1.2e-135 hisF E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PBIEDHHO_03541 6.7e-128 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PBIEDHHO_03542 1.4e-110 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PBIEDHHO_03543 8.2e-105 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
PBIEDHHO_03544 1.7e-219 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PBIEDHHO_03545 1.4e-113 hisG 2.4.2.17 E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PBIEDHHO_03546 1.8e-199 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PBIEDHHO_03547 7.2e-135 yvpB NU protein conserved in bacteria
PBIEDHHO_03548 2.4e-79 yvoF S COG0110 Acetyltransferase (isoleucine patch superfamily)
PBIEDHHO_03549 1.3e-111 ppaX 3.1.3.18, 3.6.1.1 S Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK P. Might play a role in controlling the intracellular pyrophosphate pool
PBIEDHHO_03550 3.4e-149 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PBIEDHHO_03551 1.7e-168 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Also phosphorylates dephosphorylates the HPr-like catabolite repression protein crh on a specific serine residue. Therefore, by controlling the phosphorylation state of HPr and crh, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PBIEDHHO_03552 3.4e-214 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PBIEDHHO_03553 4.1e-130 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PBIEDHHO_03554 7.6e-132 yvoA K transcriptional
PBIEDHHO_03555 3.2e-101 yxaF K Transcriptional regulator
PBIEDHHO_03556 0.0 yvnB 3.1.4.53 Q Calcineurin-like phosphoesterase
PBIEDHHO_03557 9.1e-46 yvlD S Membrane
PBIEDHHO_03558 9.6e-26 pspB KT PspC domain
PBIEDHHO_03559 5.6e-163 yvlB S Putative adhesin
PBIEDHHO_03560 4e-46 yvlA
PBIEDHHO_03561 3.6e-30 yvkN
PBIEDHHO_03562 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PBIEDHHO_03563 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PBIEDHHO_03564 7.6e-33 csbA S protein conserved in bacteria
PBIEDHHO_03565 0.0 yvkC 2.7.9.2 GT Phosphotransferase
PBIEDHHO_03566 1e-91 yvkB K Transcriptional regulator
PBIEDHHO_03567 6.5e-222 yvkA EGP Major facilitator Superfamily
PBIEDHHO_03568 4.5e-25 yuaB
PBIEDHHO_03570 1e-215 minJ O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PBIEDHHO_03571 2.9e-54 swrA S Swarming motility protein
PBIEDHHO_03572 1.3e-249 ctpB 3.4.21.102 M Belongs to the peptidase S41A family
PBIEDHHO_03573 9.6e-192 ywoF P Right handed beta helix region
PBIEDHHO_03574 2.2e-154 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
PBIEDHHO_03575 2.3e-122 ftsE D cell division ATP-binding protein FtsE
PBIEDHHO_03576 5.2e-35 cccB C COG2010 Cytochrome c, mono- and diheme variants
PBIEDHHO_03577 1.5e-147 yvjA S Uncharacterized protein conserved in bacteria (DUF2179)
PBIEDHHO_03578 9.4e-170 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PBIEDHHO_03579 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PBIEDHHO_03580 4.5e-100 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PBIEDHHO_03581 6.8e-68
PBIEDHHO_03582 1.3e-09 fliT S bacterial-type flagellum organization
PBIEDHHO_03583 7e-63 fliS N flagellar protein FliS
PBIEDHHO_03584 2.3e-239 fliD N morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
PBIEDHHO_03585 1.9e-101 fliC N Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
PBIEDHHO_03586 2.3e-31 csrA T Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
PBIEDHHO_03587 8.5e-75 fliW S Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
PBIEDHHO_03588 8.3e-78 yviE
PBIEDHHO_03589 7.4e-161 flgL N Belongs to the bacterial flagellin family
PBIEDHHO_03590 3.5e-272 flgK N flagellar hook-associated protein
PBIEDHHO_03591 5.4e-78 flgN NOU FlgN protein
PBIEDHHO_03592 2.3e-38 flgM KNU Negative regulator of flagellin synthesis
PBIEDHHO_03593 3.9e-72 yvyF S flagellar protein
PBIEDHHO_03594 6.2e-62 comFC S Phosphoribosyl transferase domain
PBIEDHHO_03595 8.2e-42 comFB S Late competence development protein ComFB
PBIEDHHO_03596 2.9e-249 comFA L COG4098 Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
PBIEDHHO_03597 8.1e-154 degV S protein conserved in bacteria
PBIEDHHO_03598 2e-126 degU KT COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PBIEDHHO_03599 2.4e-180 degS 2.7.13.3 T Member of the two-component regulatory system DegS DegU, which plays an important role in the transition growth phase
PBIEDHHO_03600 1e-116 yvyE 3.4.13.9 S Domain of unknown function (DUF1949)
PBIEDHHO_03601 4.2e-170 yvhJ K Transcriptional regulator
PBIEDHHO_03602 1.4e-182 tagO 2.7.8.33, 2.7.8.35 M COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase UDP-N-acetylglucosamine-1-phosphate transferase
PBIEDHHO_03603 5.6e-225 tuaH M Teichuronic acid biosynthesis glycosyltransferase tuaH
PBIEDHHO_03604 1.9e-141 tuaG GT2 M Glycosyltransferase like family 2
PBIEDHHO_03605 1.6e-107 tuaF M protein involved in exopolysaccharide biosynthesis
PBIEDHHO_03606 5.4e-251 tuaE M Teichuronic acid biosynthesis protein
PBIEDHHO_03607 1.5e-242 tuaD 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PBIEDHHO_03608 1.4e-212 tuaC 2.4.1.21, 3.2.1.1 GH13,GT4,GT5 GM Teichuronic acid
PBIEDHHO_03609 4.8e-255 wzxC S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PBIEDHHO_03610 1.4e-116 tuaA M COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PBIEDHHO_03611 9.7e-211 lytC 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
PBIEDHHO_03612 1.1e-303 lytB 3.5.1.28 D Stage II sporulation protein
PBIEDHHO_03613 1e-29
PBIEDHHO_03614 5.2e-138 lytR K May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG)
PBIEDHHO_03615 7e-185 mnaA 5.1.3.14 M Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PBIEDHHO_03616 2.1e-157 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PBIEDHHO_03617 1e-178 tagH 3.6.3.38, 3.6.3.40 GM Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PBIEDHHO_03618 3.4e-136 tagG GM Transport permease protein
PBIEDHHO_03619 0.0 tagF 2.7.8.12 M glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
PBIEDHHO_03620 4.9e-258 tagE 2.4.1.52 GT4 M Glycosyl transferase 1 domain A
PBIEDHHO_03621 3.4e-70 tagD 2.7.7.15, 2.7.7.39 IM Cytidylyltransferase
PBIEDHHO_03622 1.4e-139 tagA 2.4.1.187 GT26 M Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PBIEDHHO_03623 7.6e-203 tagB 2.7.8.14, 2.7.8.44, 2.7.8.47 M glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
PBIEDHHO_03624 1.5e-214 atl 3.2.1.96, 3.5.1.28 GH73 G Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PBIEDHHO_03625 3.8e-184 pmi 5.3.1.8 G mannose-6-phosphate isomerase
PBIEDHHO_03626 6e-136 gerBA EG Spore germination protein
PBIEDHHO_03627 3e-79 gerBA EG Spore germination protein
PBIEDHHO_03628 1.4e-190 gerBB E Spore germination protein
PBIEDHHO_03629 1.7e-171 gerAC S Spore germination protein
PBIEDHHO_03630 4.4e-258 GT2,GT4 J Glycosyl transferase family 2
PBIEDHHO_03631 1.6e-239 ywtG EGP Major facilitator Superfamily
PBIEDHHO_03632 1.1e-173 ywtF K Transcriptional regulator
PBIEDHHO_03633 2e-152 ywtE 3.1.3.104 S hydrolases of the HAD superfamily
PBIEDHHO_03634 4.1e-29 yttA 2.7.13.3 S Pfam Transposase IS66
PBIEDHHO_03635 8.6e-229 pgdS CBM50 M COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
PBIEDHHO_03636 3.8e-20 ywtC
PBIEDHHO_03637 1.2e-216 capA M enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
PBIEDHHO_03638 2.3e-70 pgsC S biosynthesis protein
PBIEDHHO_03639 1e-223 murD 6.3.2.9 M COG0769 UDP-N-acetylmuramyl tripeptide synthase
PBIEDHHO_03640 1.2e-184 gerKA EG Spore germination protein
PBIEDHHO_03641 2.1e-178 gerKB E Spore germination protein
PBIEDHHO_03642 3.1e-50 gerKC S Spore germination B3/ GerAC like, C-terminal
PBIEDHHO_03643 4.4e-113 gerKC S Spore germination B3/ GerAC like, C-terminal
PBIEDHHO_03644 3.1e-173 rbsR K transcriptional
PBIEDHHO_03645 1.9e-153 rbsK 2.7.1.15, 2.7.1.4 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PBIEDHHO_03646 9e-63 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PBIEDHHO_03647 8.4e-271 rbsA 3.6.3.17 G Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system
PBIEDHHO_03648 3.5e-153 rbsC G Belongs to the binding-protein-dependent transport system permease family
PBIEDHHO_03649 3.1e-159 rbsB G COG1879 ABC-type sugar transport system, periplasmic component
PBIEDHHO_03650 3.9e-85 batE T Sh3 type 3 domain protein
PBIEDHHO_03651 6.4e-88 ywrO 1.6.5.2 S NADPH-quinone reductase (modulator of drug activity B)
PBIEDHHO_03652 9e-144 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
PBIEDHHO_03653 9.6e-303 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
PBIEDHHO_03654 7.1e-164 alsR K LysR substrate binding domain
PBIEDHHO_03655 1.8e-232 ywrK P Involved in arsenical resistance. Thought to form the channel of an arsenite pump
PBIEDHHO_03656 1.2e-115 ywrJ
PBIEDHHO_03657 1.5e-113 cotB
PBIEDHHO_03658 8.5e-204 cotH M Spore Coat
PBIEDHHO_03659 1.2e-06
PBIEDHHO_03660 6.2e-111 ywrF S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PBIEDHHO_03662 1.6e-291 ggt 2.3.2.2, 3.4.19.13 E gamma-glutamyltransferase
PBIEDHHO_03663 3e-81 ywrC K Transcriptional regulator
PBIEDHHO_03664 2e-98 ywrB P Chromate transporter
PBIEDHHO_03665 5.4e-87 ywrA P COG2059 Chromate transport protein ChrA
PBIEDHHO_03666 3.3e-102
PBIEDHHO_03667 4.9e-63
PBIEDHHO_03668 1.3e-73 S SMI1 / KNR4 family
PBIEDHHO_03669 3.6e-18
PBIEDHHO_03670 8.4e-59 S SUKH-4 immunity protein
PBIEDHHO_03671 2.2e-231 ywqJ S Pre-toxin TG
PBIEDHHO_03672 1e-27 ywqI S Family of unknown function (DUF5344)
PBIEDHHO_03673 2.2e-17 S Domain of unknown function (DUF5082)
PBIEDHHO_03674 3.5e-143 ywqG S Domain of unknown function (DUF1963)
PBIEDHHO_03675 8e-241 ugd 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PBIEDHHO_03676 3.4e-135 ywqE 3.1.3.48 GM COG4464 Capsular polysaccharide biosynthesis protein
PBIEDHHO_03677 8.5e-117 ywqD 2.7.10.1 D COG0489 ATPases involved in chromosome partitioning
PBIEDHHO_03678 2.1e-105 ywqC M biosynthesis protein
PBIEDHHO_03679 2.6e-15
PBIEDHHO_03680 4.2e-300 ywqB S SWIM zinc finger
PBIEDHHO_03681 0.0 ywqA L COG0553 Superfamily II DNA RNA helicases, SNF2 family
PBIEDHHO_03682 1.9e-150 ywpJ 3.1.3.104 S hydrolases of the HAD superfamily
PBIEDHHO_03683 5.4e-136 glcR K DeoR C terminal sensor domain
PBIEDHHO_03684 5.4e-56 ssbB L Single-stranded DNA-binding protein
PBIEDHHO_03685 2.5e-56 ywpG
PBIEDHHO_03686 9.9e-68 ywpF S YwpF-like protein
PBIEDHHO_03687 5.9e-46 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PBIEDHHO_03688 4.9e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PBIEDHHO_03689 9.5e-192 S aspartate phosphatase
PBIEDHHO_03690 1.5e-136 flhP N flagellar basal body
PBIEDHHO_03691 8e-127 flhO N flagellar basal body
PBIEDHHO_03692 2.7e-180 mbl D Rod shape-determining protein
PBIEDHHO_03693 1.8e-44 spoIIID K Stage III sporulation protein D
PBIEDHHO_03694 1.1e-71 ywoH K transcriptional
PBIEDHHO_03695 4.1e-212 ywoG EGP Major facilitator Superfamily
PBIEDHHO_03696 2.4e-270 ybbW FH COG1953 Cytosine uracil thiamine allantoin permeases
PBIEDHHO_03697 9.8e-242 ywoD EGP Major facilitator superfamily
PBIEDHHO_03698 8.5e-99 phzA Q Isochorismatase family
PBIEDHHO_03699 3.9e-226 amt P Ammonium transporter
PBIEDHHO_03700 1.7e-57 nrgB K Belongs to the P(II) protein family
PBIEDHHO_03701 1.1e-206 ftsW D Belongs to the SEDS family
PBIEDHHO_03702 1.3e-99 bcrC 3.6.1.27 I COG0671 Membrane-associated phospholipid phosphatase
PBIEDHHO_03703 6.4e-67 ywnJ S VanZ like family
PBIEDHHO_03704 1.6e-120 spoIIQ M COG0739 Membrane proteins related to metalloendopeptidases
PBIEDHHO_03705 3.9e-87 ywnH 2.3.1.183 M COG1247 Sortase and related acyltransferases
PBIEDHHO_03706 3.1e-11 ywnC S Family of unknown function (DUF5362)
PBIEDHHO_03707 1.3e-67 ywnF S Family of unknown function (DUF5392)
PBIEDHHO_03708 1.2e-274 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PBIEDHHO_03709 8.6e-16 yqgA
PBIEDHHO_03710 1.3e-50 ywnC S Family of unknown function (DUF5362)
PBIEDHHO_03711 3.7e-90 ywnB S NAD(P)H-binding
PBIEDHHO_03712 6.1e-67 ywnA K Transcriptional regulator
PBIEDHHO_03713 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
PBIEDHHO_03714 5.5e-62 ureB 3.5.1.5 E Belongs to the urease beta subunit family
PBIEDHHO_03715 2e-49 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
PBIEDHHO_03716 5.3e-09 csbD K CsbD-like
PBIEDHHO_03717 1.2e-80 ywmF S Peptidase M50
PBIEDHHO_03718 8.2e-93 S response regulator aspartate phosphatase
PBIEDHHO_03719 3.8e-190 moaA 4.1.99.22, 4.6.1.17 H Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
PBIEDHHO_03720 1e-142 fdhD C Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
PBIEDHHO_03722 8.1e-120 ywmD S protein containing a von Willebrand factor type A (vWA) domain
PBIEDHHO_03723 1.3e-112 ywmC S protein containing a von Willebrand factor type A (vWA) domain
PBIEDHHO_03724 1.2e-180 spoIID D Stage II sporulation protein D
PBIEDHHO_03725 8.2e-238 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PBIEDHHO_03726 1.7e-131 ywmB S TATA-box binding
PBIEDHHO_03727 6.2e-32 ywzB S membrane
PBIEDHHO_03728 4.3e-88 ywmA
PBIEDHHO_03729 5.3e-63 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PBIEDHHO_03730 1e-265 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PBIEDHHO_03731 5.9e-152 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PBIEDHHO_03732 8.2e-282 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PBIEDHHO_03733 4.5e-89 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PBIEDHHO_03734 3e-42 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PBIEDHHO_03735 1.6e-26 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PBIEDHHO_03736 5.4e-130 atpB C it plays a direct role in the translocation of protons across the membrane
PBIEDHHO_03737 2.8e-61 atpI S ATP synthase
PBIEDHHO_03738 4e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PBIEDHHO_03739 9.6e-236 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PBIEDHHO_03740 2.7e-94 ywlG S Belongs to the UPF0340 family
PBIEDHHO_03741 4.6e-79 rpiB 5.3.1.6 G Ribose 5-phosphate isomerase
PBIEDHHO_03742 1.1e-72 ywlE 3.1.3.48, 3.9.1.2, 5.3.1.6 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PBIEDHHO_03743 6.2e-86 mntP P Probably functions as a manganese efflux pump
PBIEDHHO_03744 3.8e-185 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PBIEDHHO_03745 3.7e-73 ywlB 1.20.4.1, 2.3.1.1 E Belongs to the acetyltransferase family. ArgA subfamily
PBIEDHHO_03746 9.2e-116 spoIIR S stage II sporulation protein R
PBIEDHHO_03747 9.7e-59 ywlA S Uncharacterised protein family (UPF0715)
PBIEDHHO_03749 5.9e-152 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PBIEDHHO_03750 2.6e-189 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PBIEDHHO_03751 2.4e-65 yaeR E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PBIEDHHO_03752 2.7e-89 racA K Required for the formation of axial filaments and for anchoring the origin regions at the cell poles in sporulating cells, thus ensuring proper chromosome segregation in the prespore. Binds in a dispersed manner throughout the chromosome but preferentially to sites clustered in the origin portion of the chromosome, causing condensation of the chromosome and its remodeling into an elongated, anchored structure
PBIEDHHO_03753 1.1e-151 ywkB S Membrane transport protein
PBIEDHHO_03754 0.0 sfcA 1.1.1.38 C malic enzyme
PBIEDHHO_03755 5.6e-101 tdk 2.7.1.21 F thymidine kinase
PBIEDHHO_03756 1.1e-32 rpmE J Binds the 23S rRNA
PBIEDHHO_03757 4.3e-239 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PBIEDHHO_03758 1.1e-173 glpX 3.1.3.11, 3.1.3.37 G fructose-1,6-bisphosphatase
PBIEDHHO_03759 3.3e-239 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PBIEDHHO_03760 7.1e-110 tal 2.2.1.2 G Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PBIEDHHO_03761 2.7e-157 fbaA 4.1.2.13, 4.1.2.29 G Aldolase
PBIEDHHO_03762 2.8e-61 spo0F T COG0784 FOG CheY-like receiver
PBIEDHHO_03763 1.8e-90 ywjG S Domain of unknown function (DUF2529)
PBIEDHHO_03764 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PBIEDHHO_03765 7.1e-47 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PBIEDHHO_03766 0.0 fadF C COG0247 Fe-S oxidoreductase
PBIEDHHO_03767 1.1e-201 clsB I Belongs to the phospholipase D family. Cardiolipin synthase subfamily
PBIEDHHO_03768 2.1e-174 uvsE L Component in a DNA repair pathway. Removal of UV-light damaged nucleotides. Recognizes pyrimidine dimers and cleave a phosphodiester bond immediately 5' to the lesion
PBIEDHHO_03769 9.3e-43 ywjC
PBIEDHHO_03770 0.0 ywjA V ABC transporter
PBIEDHHO_03771 8.5e-290 ywiE I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PBIEDHHO_03772 1.4e-116 narI 1.7.5.1 C nitrate reductase, gamma
PBIEDHHO_03773 4e-85 narJ 1.7.5.1 C nitrate reductase
PBIEDHHO_03774 3.8e-292 narH 1.7.5.1 C Nitrate reductase, beta
PBIEDHHO_03775 0.0 narG 1.7.5.1 C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PBIEDHHO_03776 1.4e-78 arfM T cyclic nucleotide binding
PBIEDHHO_03777 1.6e-126 ywiC S YwiC-like protein
PBIEDHHO_03778 1.4e-125 fnr K helix_turn_helix, cAMP Regulatory protein
PBIEDHHO_03779 4.3e-209 narK P COG2223 Nitrate nitrite transporter
PBIEDHHO_03780 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PBIEDHHO_03781 1.5e-71 ywiB S protein conserved in bacteria
PBIEDHHO_03783 1.2e-189 ywhL CO amine dehydrogenase activity
PBIEDHHO_03784 5.8e-78 S aspartate phosphatase
PBIEDHHO_03786 2.3e-167 speB 3.5.3.11 E Belongs to the arginase family
PBIEDHHO_03787 1.6e-157 speE 2.5.1.16 E Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
PBIEDHHO_03788 0.0 pbpG 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PBIEDHHO_03789 3e-72
PBIEDHHO_03790 5.1e-90 ywhD S YwhD family
PBIEDHHO_03791 2.1e-117 ywhC S Peptidase family M50
PBIEDHHO_03792 1.3e-24 dmpI 5.3.2.6 G 4-oxalocrotonate tautomerase
PBIEDHHO_03793 9.8e-68 ywhA K Transcriptional regulator
PBIEDHHO_03794 4.9e-241 yhdG_1 E C-terminus of AA_permease
PBIEDHHO_03795 1.7e-87 ywgA 2.1.1.72, 3.1.21.3
PBIEDHHO_03796 1.5e-252 ywfO S COG1078 HD superfamily phosphohydrolases
PBIEDHHO_03797 6.9e-36 ywzC S Belongs to the UPF0741 family
PBIEDHHO_03798 2.2e-105 rsfA_1
PBIEDHHO_03800 1.3e-48 padR K PadR family transcriptional regulator
PBIEDHHO_03801 9e-85 S membrane
PBIEDHHO_03802 1.1e-92 V ABC transporter, ATP-binding protein
PBIEDHHO_03803 1.1e-42 V ABC transporter, ATP-binding protein
PBIEDHHO_03804 2.4e-162 yhcI S ABC transporter (permease)
PBIEDHHO_03807 1.9e-164
PBIEDHHO_03809 2.2e-154 lipL 2.3.1.200, 2.3.1.204 H Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes
PBIEDHHO_03810 1e-154 cysL K Transcriptional regulator
PBIEDHHO_03811 1.5e-151 MA20_14895 S Conserved hypothetical protein 698
PBIEDHHO_03812 8.1e-174 pta 2.3.1.19, 2.3.1.8, 3.6.3.21 C In Salmonella this enzyme is required for ethanolamine catabolism
PBIEDHHO_03813 9e-144 ywfI C May function as heme-dependent peroxidase
PBIEDHHO_03814 8.9e-139 IQ Enoyl-(Acyl carrier protein) reductase
PBIEDHHO_03815 4.9e-229 ywfG 2.6.1.83 E Aminotransferase class I and II
PBIEDHHO_03816 4.7e-208 bacE EGP Major facilitator Superfamily
PBIEDHHO_03817 8e-263 purD 6.3.2.49, 6.3.4.13 F Part of the bacABCDEFG operon responsible for the biosynthesis of bacilysin, an irreversible inactivator of the glutaminase domain of glucosamine synthetase. Catalyzes the formation of alpha-dipeptides from various L-amino acids in the presence of ATP. In vivo catalyzes the ligation of L-alanine and L-anticapsin (epoxycyclohexanonyl-Ala) to produce the final bacilysin antibiotic (L-Ala-L-4S-cyclohexenonyl-Ala dipeptide)
PBIEDHHO_03818 3.3e-138 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PBIEDHHO_03819 2.1e-134 bacB 5.3.3.19, 5.4.99.5 S Part of the bacABCDEF operon responsible for the biosynthesis of the nonribosomally synthesized dipeptide antibiotic bacilysin, composed of L-alanine and L-anticapsin. Bacilysin is an irreversible inactivator of the glutaminase domain of glucosamine synthetase. BacB catalyzes the allylic isomerization of the
PBIEDHHO_03820 1.4e-110 pheA 1.1.1.3, 1.3.1.12, 4.1.1.100, 4.2.1.51, 5.4.99.5 E Part of the bacABCDEF operon responsible for the biosynthesis of the nonribosomally synthesized dipeptide antibiotic bacilysin, composed of L-alanine and L-anticapsin. Bacilysin is an irreversible inactivator of the glutaminase domain of glucosamine synthetase. BacA is an unusual prephenate decarboxylase that avoids the typical aromatization of the cyclohexadienol ring of prephenate. BacA catalyzes the protonation of prephenate (1-carboxy-4-hydroxy-alpha-oxo-2,5-cyclohexadiene-1- propanoic acid) at C6 position, followed by a decarboxylation to produce the endocyclic-delta(4),delta(8)-7R-dihydro- hydroxyphenylpyruvate (en-H2HPP). En-H2HPP is able to undergo a slow nonenzymatic isomerization to produce the exocyclic- delta(3),delta(5)-dihydro-hydroxyphenylpyruvate (ex-H2HPP). BacA isomerizes only the pro-R double bond in prephenate
PBIEDHHO_03821 5.8e-217 ywfA EGP Major facilitator Superfamily
PBIEDHHO_03822 3.4e-166 tcaB EGP Major facilitator Superfamily
PBIEDHHO_03823 4.2e-256 lysP E amino acid
PBIEDHHO_03824 0.0 rocB E arginine degradation protein
PBIEDHHO_03825 2.1e-293 putA 1.2.1.88, 1.5.5.2 C Belongs to the aldehyde dehydrogenase family. RocA subfamily
PBIEDHHO_03826 1.1e-245 rocG 1.4.1.2, 1.4.1.3 E Belongs to the Glu Leu Phe Val dehydrogenases family
PBIEDHHO_03827 2.6e-61
PBIEDHHO_03828 1.3e-84 spsL 5.1.3.13 M Spore Coat
PBIEDHHO_03829 5.6e-155 spsK 1.1.1.133 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PBIEDHHO_03830 1e-176 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PBIEDHHO_03831 4.5e-132 spsI 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PBIEDHHO_03832 5.8e-167 spsG M Spore Coat
PBIEDHHO_03833 2.6e-124 spsF M Spore Coat
PBIEDHHO_03834 1.4e-209 spsE 2.5.1.56 M acid synthase
PBIEDHHO_03835 6.6e-151 spsD 2.3.1.210 K Spore Coat
PBIEDHHO_03836 1e-215 spsC E Belongs to the DegT DnrJ EryC1 family
PBIEDHHO_03837 2.7e-258 spsB M Capsule polysaccharide biosynthesis protein
PBIEDHHO_03838 9.4e-141 spsA M Spore Coat
PBIEDHHO_03839 1.6e-62 gerQ S Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA
PBIEDHHO_03840 5e-55 ywdK S small membrane protein
PBIEDHHO_03841 1.9e-226 ywdJ F Xanthine uracil
PBIEDHHO_03842 5.4e-36 ywdI S Family of unknown function (DUF5327)
PBIEDHHO_03843 5.4e-132 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PBIEDHHO_03844 9.2e-147 ywdF GT2,GT4 S Glycosyltransferase like family 2
PBIEDHHO_03846 1.9e-144 thiD 2.5.1.3, 2.7.1.35, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PBIEDHHO_03847 1.5e-20 ywdA
PBIEDHHO_03848 5.8e-269 scrB 3.2.1.26, 3.2.1.65 GH32 G invertase
PBIEDHHO_03849 2.1e-247 scrA 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PBIEDHHO_03850 7e-150 sacT K transcriptional antiterminator
PBIEDHHO_03852 0.0 vpr O Belongs to the peptidase S8 family
PBIEDHHO_03853 6.4e-182 ywcH C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PBIEDHHO_03854 2.7e-118 M1-869 K WYL domain
PBIEDHHO_03855 4e-126 IQ Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PBIEDHHO_03856 3.2e-42 S Ketosteroid isomerase-related protein
PBIEDHHO_03857 2.1e-32 S Stress responsive A/B Barrel Domain
PBIEDHHO_03858 6.8e-136 nfrA 1.5.1.38, 1.5.1.39 C Oxidoreductase
PBIEDHHO_03859 1.8e-207 rodA D Belongs to the SEDS family
PBIEDHHO_03860 6.3e-68 ysnE K acetyltransferase
PBIEDHHO_03861 1e-38 ywcE S Required for proper spore morphogenesis. Important for spore germination
PBIEDHHO_03862 1.6e-61 qoxD 1.10.3.12, 1.9.3.1 C quinol oxidase, subunit
PBIEDHHO_03863 2.3e-110 qoxC 1.10.3.12, 1.9.3.1 C quinol oxidase, subunit
PBIEDHHO_03864 0.0 qoxB 1.10.3.12, 1.9.3.1 C Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
PBIEDHHO_03865 1.6e-177 cyoA 1.10.3.10, 1.10.3.12 C Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I
PBIEDHHO_03866 8.4e-27 ywzA S membrane
PBIEDHHO_03867 6.4e-282 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PBIEDHHO_03868 2.1e-208 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PBIEDHHO_03869 9.6e-60 gtcA S GtrA-like protein
PBIEDHHO_03870 1.1e-96 ywcC K Bacterial regulatory proteins, tetR family
PBIEDHHO_03872 8.3e-125 H Methionine biosynthesis protein MetW
PBIEDHHO_03873 6.8e-119 S Streptomycin biosynthesis protein StrF
PBIEDHHO_03874 6.3e-108 ywbO Q dithiol-disulfide isomerase involved in polyketide biosynthesis
PBIEDHHO_03875 1e-232 ywbN P Dyp-type peroxidase family protein
PBIEDHHO_03876 2.4e-132 ycdO P periplasmic lipoprotein involved in iron transport
PBIEDHHO_03877 3.6e-194 P COG0672 High-affinity Fe2 Pb2 permease
PBIEDHHO_03878 1.8e-108 thiE 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PBIEDHHO_03879 4.8e-127 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PBIEDHHO_03880 2.6e-150 ywbI K Transcriptional regulator
PBIEDHHO_03881 2.5e-57 ywbH S Increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation. Inhibited by the antiholin-like proteins LrgAB. In an unstressed cell, the LrgAB products probably inhibit the function of the CidA protein. When a cell is stressed by the addition of antibiotics or by other factors in the environment, CidA possibly oligomerizes within the bacterial cell membrane, creating lesions that disrupt the proton motive force, which in turn results in loss of cell viability. These lesions are also hypothesized to regulate the subsequent cell lysis by either allowing the murein hydrolases access to the cell wall substrate and or regulating their activity by a
PBIEDHHO_03882 2.2e-109 ywbG M effector of murein hydrolase
PBIEDHHO_03883 1.5e-26 ywbE S Uncharacterized conserved protein (DUF2196)
PBIEDHHO_03884 1.8e-128 mta K transcriptional
PBIEDHHO_03885 7.1e-156 yjfC O Predicted Zn-dependent protease (DUF2268)
PBIEDHHO_03886 4.9e-221 ywbD 2.1.1.191 J Methyltransferase
PBIEDHHO_03887 2.9e-66 ywbC 4.4.1.5 E glyoxalase
PBIEDHHO_03888 1.6e-241 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PBIEDHHO_03889 7.8e-252 epr 3.4.21.62 O Belongs to the peptidase S8 family
PBIEDHHO_03890 1.6e-160 gspA M General stress
PBIEDHHO_03892 2.9e-116 ywaC 2.7.6.5 S protein conserved in bacteria
PBIEDHHO_03893 1.9e-167 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
PBIEDHHO_03894 4.7e-12 S D-Ala-teichoic acid biosynthesis protein
PBIEDHHO_03895 9e-289 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PBIEDHHO_03896 6.5e-226 dltB M membrane protein involved in D-alanine export
PBIEDHHO_03897 5.6e-36 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PBIEDHHO_03898 5.6e-193 dltD M COG3966 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PBIEDHHO_03899 5.5e-203 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PBIEDHHO_03900 2.3e-248 licH 3.2.1.86 GT4 G COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
PBIEDHHO_03901 6.2e-49 licA 2.7.1.196, 2.7.1.205 G phosphotransferase system
PBIEDHHO_03902 1.2e-244 licC 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PBIEDHHO_03903 7.5e-49 licB 2.7.1.196, 2.7.1.205 G transporter subunit IIB
PBIEDHHO_03904 2.9e-227 licR 2.7.1.202 GKT Mga helix-turn-helix domain
PBIEDHHO_03905 1e-117 licR 2.7.1.202 GKT Mga helix-turn-helix domain
PBIEDHHO_03906 5.2e-107 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PBIEDHHO_03907 2.9e-169 fhuB3 P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PBIEDHHO_03908 3.3e-178 fhuG1 P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PBIEDHHO_03909 2.2e-165 cbrA3 P Periplasmic binding protein
PBIEDHHO_03910 1.2e-50 arsR K transcriptional
PBIEDHHO_03911 3.9e-224 arsB P Involved in arsenical resistance. Thought to form the channel of an arsenite pump
PBIEDHHO_03912 4.9e-48 ydhM 2.7.1.196, 2.7.1.205 G phosphotransferase system
PBIEDHHO_03913 1.9e-47 ydhN3 2.7.1.196, 2.7.1.205 G phosphotransferase system
PBIEDHHO_03914 1.8e-224 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PBIEDHHO_03915 1.8e-278 ydhP 3.2.1.21, 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PBIEDHHO_03916 1.1e-161 gmuE 2.7.1.2, 2.7.1.4 GK COG1940 Transcriptional regulator sugar kinase
PBIEDHHO_03917 3.1e-178 manA 5.3.1.8 G mannose-6-phosphate isomerase
PBIEDHHO_03918 6.9e-206 gmuG 3.2.1.78 GH26 G Belongs to the glycosyl hydrolase 26 family
PBIEDHHO_03919 0.0 katX 1.11.1.6 P serves to protect cells from the toxic effects of hydrogen peroxide
PBIEDHHO_03920 1.2e-188 yxeI 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
PBIEDHHO_03921 6.3e-249 yxlA F Belongs to the purine-cytosine permease (2.A.39) family
PBIEDHHO_03922 2e-149 nnrD 4.2.1.136, 5.1.99.6 G Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PBIEDHHO_03923 7.4e-287 cydD V ATP-binding protein
PBIEDHHO_03924 6.4e-307 cydD V ATP-binding
PBIEDHHO_03925 5.7e-186 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase, subunit II
PBIEDHHO_03926 3.8e-265 cydA 1.10.3.14 C oxidase, subunit
PBIEDHHO_03927 2.3e-211 cimH C COG3493 Na citrate symporter
PBIEDHHO_03928 1.2e-149 yxkH G Polysaccharide deacetylase
PBIEDHHO_03929 6.5e-204 msmK P Belongs to the ABC transporter superfamily
PBIEDHHO_03930 2e-155 lrp QT PucR C-terminal helix-turn-helix domain
PBIEDHHO_03931 6.4e-143 yxkD S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PBIEDHHO_03933 3.7e-82 yxkC S Domain of unknown function (DUF4352)
PBIEDHHO_03934 2.6e-191 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PBIEDHHO_03935 2.6e-233 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PBIEDHHO_03938 3e-81 yxjI S LURP-one-related
PBIEDHHO_03939 9.4e-214 yxjG 2.1.1.14 E Methionine synthase
PBIEDHHO_03940 1.8e-143 rlmA 2.1.1.187 Q Methyltransferase domain
PBIEDHHO_03941 6.8e-208 nupG F Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PBIEDHHO_03942 6e-67 T Domain of unknown function (DUF4163)
PBIEDHHO_03943 2.8e-45 yxiS
PBIEDHHO_03944 6.4e-181 L DNA synthesis involved in DNA repair
PBIEDHHO_03945 0.0 katE 1.11.1.6, 3.5.1.124 P serves to protect cells from the toxic effects of hydrogen peroxide
PBIEDHHO_03946 2e-220 citH C Citrate transporter
PBIEDHHO_03947 3.8e-136 exoK GH16 M licheninase activity
PBIEDHHO_03948 1.8e-142 licT K transcriptional antiterminator
PBIEDHHO_03949 1.6e-219 yxiO S COG2270 Permeases of the major facilitator superfamily
PBIEDHHO_03950 3.4e-253 dbpA 3.6.4.13 JKL DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes
PBIEDHHO_03952 1.4e-21
PBIEDHHO_03953 5.8e-14 S YxiJ-like protein
PBIEDHHO_03954 3.9e-111
PBIEDHHO_03955 5.6e-77
PBIEDHHO_03956 9.9e-65 yxiG
PBIEDHHO_03957 2.6e-57 yxxG
PBIEDHHO_03959 1.3e-196 pelB 4.2.2.10, 4.2.2.2 G Pectate lyase
PBIEDHHO_03960 1.5e-142 yxxF EG EamA-like transporter family
PBIEDHHO_03961 4.1e-72 yxiE T Belongs to the universal stress protein A family
PBIEDHHO_03962 3.1e-275 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PBIEDHHO_03963 6.8e-307 bglF 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PBIEDHHO_03964 1.7e-46 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
PBIEDHHO_03965 2e-146 dcm 2.1.1.37 L C-5 cytosine-specific DNA methylase
PBIEDHHO_03966 9.7e-163 L Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PBIEDHHO_03967 2.6e-262 L Z1 domain
PBIEDHHO_03968 3.4e-82 S Putative PD-(D/E)XK family member, (DUF4420)
PBIEDHHO_03969 3.3e-197 S AIPR protein
PBIEDHHO_03970 2e-266 yxiA 3.2.1.99 GH43 G Belongs to the glycosyl hydrolase 43 family
PBIEDHHO_03971 8.5e-78 hutP K Antiterminator that binds to cis-acting regulatory sequences on the mRNA in the presence of histidine, thereby suppressing transcription termination and activating the hut operon for histidine utilization
PBIEDHHO_03972 1.1e-281 hutH 4.3.1.3 E Histidine ammonia-lyase
PBIEDHHO_03973 0.0 hutU 4.2.1.49 E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
PBIEDHHO_03974 9.4e-231 hutI 3.5.2.7 Q Imidazolone-5-propionate hydrolase
PBIEDHHO_03975 1e-168 hutG 3.5.3.11, 3.5.3.8 E Catalyzes the conversion of N-formimidoyl-L-glutamate to L-glutamate and formamide
PBIEDHHO_03976 1.1e-248 lysP E amino acid
PBIEDHHO_03977 3.3e-231 pdp 2.4.2.2, 2.4.2.4 F phosphorylase
PBIEDHHO_03978 1.2e-206 nupC F Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PBIEDHHO_03979 9.4e-113 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PBIEDHHO_03980 5.3e-170 deoR K COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
PBIEDHHO_03981 2.1e-146 yidA S hydrolases of the HAD superfamily
PBIEDHHO_03986 7.9e-21 yxeD
PBIEDHHO_03987 2.7e-35
PBIEDHHO_03988 1.2e-169 fhuD P Periplasmic binding protein
PBIEDHHO_03989 2.7e-55 yxeA S Protein of unknown function (DUF1093)
PBIEDHHO_03990 0.0 yxdM V ABC transporter (permease)
PBIEDHHO_03991 1.4e-136 yxdL V ABC transporter, ATP-binding protein
PBIEDHHO_03992 9.6e-175 T PhoQ Sensor
PBIEDHHO_03993 1.9e-121 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PBIEDHHO_03994 4.6e-152 iolJ 4.1.2.13, 4.1.2.29 F Produces dihydroxyacetone phosphate (DHAP or glycerone phosphate) and malonic semialdehyde (MSA or 3-oxopropanoate) from 6-phospho-5-dehydro-2-deoxy-D-gluconate (DKGP)
PBIEDHHO_03995 4.8e-146 iolI 5.3.99.11 G Involved in the reversible interconverion of 2-keto-myo- inositol (2KMI, inosose or 2,4,6 3,5-pentahydroxycyclohexanone) to 1-keto-D-chiro-inositol (1KDCI or 2,3,5 4,6- pentahydroxycyclohexanone)
PBIEDHHO_03996 6.8e-164 iolH G Xylose isomerase-like TIM barrel
PBIEDHHO_03997 1.1e-192 iolG 1.1.1.18, 1.1.1.369 S Involved in the oxidation of myo-inositol (MI) and D- chiro-inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D-chiro-inositol (1KDCI), respectively
PBIEDHHO_03998 2e-228 iolF EGP Major facilitator Superfamily
PBIEDHHO_03999 1.8e-172 iolE 4.2.1.44 H Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6 3,5-pentahydroxycyclohexanone) to 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol)
PBIEDHHO_04000 0.0 iolD 3.7.1.22 E Involved in the cleavage of the C1-C2 bond of 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy- glucuronate (5DG)
PBIEDHHO_04001 1.6e-177 iolC 2.7.1.92 G Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP)
PBIEDHHO_04002 8.7e-153 iolB 5.3.1.30 G Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate)
PBIEDHHO_04003 3e-281 iolA 1.2.1.18, 1.2.1.27 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PBIEDHHO_04004 8.9e-136 iolR K COG1349 Transcriptional regulators of sugar metabolism
PBIEDHHO_04005 6.2e-171 iolS C Aldo keto reductase
PBIEDHHO_04006 4.8e-244 csbC EGP Major facilitator Superfamily
PBIEDHHO_04007 0.0 htpG O Molecular chaperone. Has ATPase activity
PBIEDHHO_04008 2.1e-146 IQ Enoyl-(Acyl carrier protein) reductase
PBIEDHHO_04009 1.6e-100 desR T COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PBIEDHHO_04010 3.5e-192 desK 2.7.13.3 T Histidine kinase
PBIEDHHO_04011 1.2e-194 des 1.14.19.23, 1.14.19.45 I fatty acid desaturase
PBIEDHHO_04012 1.4e-209 yxbF K Bacterial regulatory proteins, tetR family
PBIEDHHO_04013 4.9e-246 alkH 1.2.1.3 C Belongs to the aldehyde dehydrogenase family
PBIEDHHO_04014 1.6e-137 S PQQ-like domain
PBIEDHHO_04015 2.7e-57 S Family of unknown function (DUF5391)
PBIEDHHO_04016 4.3e-49 arsR3 K helix_turn_helix, Arsenical Resistance Operon Repressor
PBIEDHHO_04017 5.1e-199 EGP Major facilitator Superfamily
PBIEDHHO_04018 1.9e-64 yxaI S membrane protein domain
PBIEDHHO_04019 9e-119 E Ring-cleavage extradiol dioxygenase
PBIEDHHO_04020 9.4e-106 ahpC 1.11.1.15 O Alkyl hydroperoxide reductase
PBIEDHHO_04021 8.9e-284 ahpF O Alkyl hydroperoxide reductase
PBIEDHHO_04022 9e-186 G Major royal jelly protein
PBIEDHHO_04023 1e-235 aapA E COG1113 Gamma-aminobutyrate permease and related permeases
PBIEDHHO_04024 3.4e-156 K helix_turn_helix, Deoxyribose operon repressor
PBIEDHHO_04025 1.4e-73 K Integron-associated effector binding protein
PBIEDHHO_04026 5.4e-75 yjhE S Phage tail protein
PBIEDHHO_04027 0.0 L Transposase and inactivated derivatives, TnpA family
PBIEDHHO_04028 7.1e-85 L resolvase
PBIEDHHO_04029 1.3e-78
PBIEDHHO_04031 6e-26 S Protein of unknown function (DUF1657)
PBIEDHHO_04032 4.1e-78 S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PBIEDHHO_04033 2.6e-80 spoVAC S stage V sporulation protein AC
PBIEDHHO_04034 1e-195 spoVAD I Stage V sporulation protein AD
PBIEDHHO_04035 8.5e-57 spoVAE S stage V sporulation protein
PBIEDHHO_04036 5.8e-29 S Protein of unknown function (DUF1657)
PBIEDHHO_04037 1.4e-148 yetF1 S membrane
PBIEDHHO_04038 1.2e-70 S Protein of unknown function (DUF421)
PBIEDHHO_04039 2.7e-285 clsA_1 I PLD-like domain
PBIEDHHO_04040 2.5e-92 S Protein of unknown function (DUF421)
PBIEDHHO_04041 0.0 fbp 3.1.3.11 G Firmicute fructose-1,6-bisphosphatase
PBIEDHHO_04042 3.2e-78 pucE 1.2.5.3, 1.3.99.16 C COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs
PBIEDHHO_04043 4.9e-143 1.2.5.3 C COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM homologs
PBIEDHHO_04044 0.0 C COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs
PBIEDHHO_04045 1.6e-82 pucB 1.1.1.328, 1.17.1.4, 2.7.7.76 S MobA-like NTP transferase domain
PBIEDHHO_04046 5.2e-157 pucA 1.17.1.4 O COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
PBIEDHHO_04047 4e-155 S Fusaric acid resistance protein-like
PBIEDHHO_04048 6.5e-19
PBIEDHHO_04049 2.8e-154 3.6.4.12 L AAA domain
PBIEDHHO_04050 1.3e-122 3.6.4.12 L AAA domain
PBIEDHHO_04051 0.0 L AAA ATPase domain
PBIEDHHO_04052 2e-80 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PBIEDHHO_04053 7.9e-08 S YyzF-like protein
PBIEDHHO_04056 2.3e-207 yycP
PBIEDHHO_04057 1.9e-130 yycO S Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
PBIEDHHO_04058 9.3e-178 C oxidoreductases (related to aryl-alcohol dehydrogenases)
PBIEDHHO_04059 1.4e-81 yycN 2.3.1.128 K Acetyltransferase
PBIEDHHO_04061 2.1e-197 S Histidine kinase
PBIEDHHO_04062 8.2e-165 rocF 3.5.3.1, 3.5.3.11 E Belongs to the arginase family
PBIEDHHO_04063 1.5e-253 rocE E amino acid
PBIEDHHO_04064 8.7e-234 rocD 2.6.1.11, 2.6.1.13, 2.6.1.17 E Catalyzes the interconversion of ornithine to glutamate semialdehyde
PBIEDHHO_04065 1.6e-61 S Immunity protein that provides protection for the cell against the toxic effects of SDP, its own SdpC-derived killing factor, and that functions as a receptor signal transduction protein as well. Once SDP accumulates in the extracellular milieu, SdpI binds to SDP, causing sequestration of SdpR at the bacterial membrane
PBIEDHHO_04066 1.3e-42 sdpR K transcriptional
PBIEDHHO_04067 4.7e-253 rocR KT COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
PBIEDHHO_04068 8.4e-197 S Major Facilitator Superfamily
PBIEDHHO_04069 3.7e-244 phoR3 2.7.13.3 T COG0642 Signal transduction histidine kinase
PBIEDHHO_04070 6.5e-93 K PFAM response regulator receiver
PBIEDHHO_04071 1.9e-63 S Peptidase propeptide and YPEB domain
PBIEDHHO_04072 1.7e-213 htrA 3.4.21.107 O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PBIEDHHO_04073 6.7e-150 vicX 3.1.26.11 S COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I
PBIEDHHO_04074 8.6e-148 yycI S protein conserved in bacteria
PBIEDHHO_04075 2.2e-257 yycH S protein conserved in bacteria
PBIEDHHO_04076 0.0 vicK 2.7.13.3 T Histidine kinase
PBIEDHHO_04077 1.1e-132 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PBIEDHHO_04082 1.1e-247 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PBIEDHHO_04083 2.5e-71 yycE 3.4.21.26, 5.3.1.24 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PBIEDHHO_04084 6.1e-252 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PBIEDHHO_04085 2.3e-27 yycD S Uncharacterized protein conserved in bacteria (DUF2188)
PBIEDHHO_04087 3.5e-17 yycC K YycC-like protein
PBIEDHHO_04088 2.1e-214 M Glycosyltransferase Family 4
PBIEDHHO_04089 5.5e-192 S Ecdysteroid kinase
PBIEDHHO_04090 2.1e-232 S Carbamoyl-phosphate synthase L chain, ATP binding domain
PBIEDHHO_04091 7.8e-220 M Glycosyltransferase Family 4
PBIEDHHO_04092 1.3e-119 S GlcNAc-PI de-N-acetylase
PBIEDHHO_04093 6.8e-83 KLT COG0515 Serine threonine protein kinase
PBIEDHHO_04094 3.2e-72 rplI J binds to the 23S rRNA
PBIEDHHO_04095 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PBIEDHHO_04096 1e-149 yybS S membrane
PBIEDHHO_04098 1.3e-79 cotF M Spore coat protein
PBIEDHHO_04099 2e-64 ydeP3 K Transcriptional regulator
PBIEDHHO_04100 7.3e-164 ppaC 3.6.1.1 C Inorganic pyrophosphatase
PBIEDHHO_04101 2.5e-150 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PBIEDHHO_04102 2e-266 sacB 2.4.1.10 GH68 M levansucrase activity
PBIEDHHO_04103 1.5e-302 levB 3.2.1.26, 3.2.1.64, 3.2.1.65 GH32 G Belongs to the glycosyl hydrolase 32 family
PBIEDHHO_04104 1.1e-108 K FCD domain
PBIEDHHO_04105 1.9e-73 dinB S PFAM DinB family protein
PBIEDHHO_04106 8.9e-146 G Major Facilitator Superfamily
PBIEDHHO_04107 4.2e-54 ypaA S Protein of unknown function (DUF1304)
PBIEDHHO_04108 4.4e-112 drgA C nitroreductase
PBIEDHHO_04109 1.6e-65 ydgJ K Winged helix DNA-binding domain
PBIEDHHO_04110 5.3e-148 yqfU S Uncharacterized protein conserved in bacteria (DUF2179)
PBIEDHHO_04111 3.1e-75 yybA 2.3.1.57 K transcriptional
PBIEDHHO_04112 1.8e-70 yjcF S Acetyltransferase (GNAT) domain
PBIEDHHO_04113 3.8e-103 S Alpha/beta hydrolase family
PBIEDHHO_04114 2e-27
PBIEDHHO_04115 2.8e-67 ynaF
PBIEDHHO_04116 1.1e-167 yyaL O COG1331 Highly conserved protein containing a thioredoxin domain
PBIEDHHO_04117 1.6e-213 yyaL O COG1331 Highly conserved protein containing a thioredoxin domain
PBIEDHHO_04118 7.5e-150 yyaK S CAAX protease self-immunity
PBIEDHHO_04119 3.5e-236 ydjK G Sugar (and other) transporter
PBIEDHHO_04120 5.4e-65 yyaH 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PBIEDHHO_04121 6.9e-170 ccpB 3.5.1.4, 5.1.1.1 K Transcriptional regulator
PBIEDHHO_04122 1.7e-139 xth 3.1.11.2 L exodeoxyribonuclease III
PBIEDHHO_04123 4.5e-86 adaB 2.1.1.63, 3.2.2.21 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PBIEDHHO_04124 1.2e-95 adaA 3.2.2.21 K Transcriptional regulator
PBIEDHHO_04125 3e-37 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PBIEDHHO_04126 8.4e-69 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PBIEDHHO_04127 3.6e-45 rpsF J Binds together with S18 to 16S ribosomal RNA
PBIEDHHO_04128 1.3e-199 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PBIEDHHO_04129 0.0 yyaE C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PBIEDHHO_04130 2.3e-33 yyzM S protein conserved in bacteria
PBIEDHHO_04131 2.4e-168 yyaD S Membrane
PBIEDHHO_04132 4.5e-57 4.2.1.103 K FR47-like protein
PBIEDHHO_04133 1.1e-107 yyaC S Sporulation protein YyaC
PBIEDHHO_04134 1.5e-147 spo0J K Belongs to the ParB family
PBIEDHHO_04135 2.6e-135 soj D COG1192 ATPases involved in chromosome partitioning
PBIEDHHO_04136 1.1e-150 noc D Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage
PBIEDHHO_04137 1.5e-124 rsmG 2.1.1.170 J Specifically methylates the N7 position of guanine in position 535 of 16S rRNA
PBIEDHHO_04138 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PBIEDHHO_04139 5.2e-251 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PBIEDHHO_04140 8.2e-106 jag S single-stranded nucleic acid binding R3H
PBIEDHHO_04141 4.3e-133 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PBIEDHHO_04142 1.2e-50 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PBIEDHHO_04147 2.7e-101 S COG0457 FOG TPR repeat
PBIEDHHO_04148 9.4e-181 L Replication protein
PBIEDHHO_04151 1.7e-26 traI 2.5.1.15 U relaxase mobilization nuclease domain protein

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)