ORF_ID e_value Gene_name EC_number CAZy COGs Description
GKDGPIGP_00001 3.3e-280 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GKDGPIGP_00002 1.9e-206 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
GKDGPIGP_00003 1.2e-200 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GKDGPIGP_00004 4.2e-83 S Protein of unknown function (DUF721)
GKDGPIGP_00005 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GKDGPIGP_00006 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GKDGPIGP_00007 8.4e-51 S Transmembrane domain of unknown function (DUF3566)
GKDGPIGP_00008 1.3e-187 lacR K Transcriptional regulator, LacI family
GKDGPIGP_00009 2.4e-15 lacS G Psort location CytoplasmicMembrane, score 10.00
GKDGPIGP_00010 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GKDGPIGP_00011 4.5e-205 V VanZ like family
GKDGPIGP_00013 4.3e-258 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
GKDGPIGP_00014 5.3e-197 S Psort location CytoplasmicMembrane, score
GKDGPIGP_00017 1.3e-122 S Protein of unknown function DUF45
GKDGPIGP_00019 2.2e-251 S Domain of unknown function (DUF4143)
GKDGPIGP_00020 9.5e-83 dps P Belongs to the Dps family
GKDGPIGP_00021 2.9e-230 ytfL P Transporter associated domain
GKDGPIGP_00022 3.5e-208 S AAA ATPase domain
GKDGPIGP_00023 3.4e-118 cah 4.2.1.1 P Reversible hydration of carbon dioxide
GKDGPIGP_00024 2.9e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
GKDGPIGP_00025 0.0 trxB2 1.8.1.9 C Thioredoxin domain
GKDGPIGP_00026 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
GKDGPIGP_00027 3e-162
GKDGPIGP_00028 0.0 S Uncharacterised protein conserved in bacteria (DUF2194)
GKDGPIGP_00029 3.5e-282 pelF GT4 M Domain of unknown function (DUF3492)
GKDGPIGP_00030 1.4e-281 pelG S Putative exopolysaccharide Exporter (EPS-E)
GKDGPIGP_00031 0.0 cotH M CotH kinase protein
GKDGPIGP_00032 4.1e-158 P VTC domain
GKDGPIGP_00033 1.6e-109 S Domain of unknown function (DUF4956)
GKDGPIGP_00034 0.0 yliE T Putative diguanylate phosphodiesterase
GKDGPIGP_00035 6.5e-125 S AAA domain
GKDGPIGP_00036 2.3e-311 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
GKDGPIGP_00037 2.6e-25 trxB1 1.8.1.9 C Thioredoxin domain
GKDGPIGP_00038 7e-123 araQ G Binding-protein-dependent transport system inner membrane component
GKDGPIGP_00039 3.8e-104 ugpA_1 P Binding-protein-dependent transport system inner membrane component
GKDGPIGP_00040 3e-203 G Bacterial extracellular solute-binding protein
GKDGPIGP_00041 9.3e-79 cpdA 2.1.2.2, 3.1.4.17, 3.1.4.53 T Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
GKDGPIGP_00042 7.7e-72 oppF3 P Belongs to the ABC transporter superfamily
GKDGPIGP_00043 6.4e-36 ybfG M Domain of unknown function (DUF1906)
GKDGPIGP_00045 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
GKDGPIGP_00046 0.0 yjjP S Threonine/Serine exporter, ThrE
GKDGPIGP_00047 1.8e-298 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GKDGPIGP_00048 4.9e-166 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
GKDGPIGP_00049 3.3e-305 S Amidohydrolase family
GKDGPIGP_00050 5.5e-203 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
GKDGPIGP_00051 1.2e-38 S Protein of unknown function (DUF3073)
GKDGPIGP_00052 3.6e-112 K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
GKDGPIGP_00053 2.7e-208 2.7.13.3 T Histidine kinase
GKDGPIGP_00054 2.5e-224 EGP Major Facilitator Superfamily
GKDGPIGP_00055 1.1e-71 I Sterol carrier protein
GKDGPIGP_00056 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
GKDGPIGP_00057 2.6e-35
GKDGPIGP_00058 7.9e-121 gluP 3.4.21.105 S Rhomboid family
GKDGPIGP_00059 2.6e-69 crgA D Involved in cell division
GKDGPIGP_00060 1.8e-118 S Bacterial protein of unknown function (DUF881)
GKDGPIGP_00061 1.5e-230 srtA 3.4.22.70 M Sortase family
GKDGPIGP_00062 2.9e-119 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
GKDGPIGP_00063 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
GKDGPIGP_00064 5.7e-172 T Protein tyrosine kinase
GKDGPIGP_00065 6.3e-263 pbpA M penicillin-binding protein
GKDGPIGP_00066 1.2e-278 rodA D Belongs to the SEDS family
GKDGPIGP_00067 1.1e-271 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
GKDGPIGP_00068 2.1e-75 fhaB T Inner membrane component of T3SS, cytoplasmic domain
GKDGPIGP_00069 3.7e-128 fhaA T Protein of unknown function (DUF2662)
GKDGPIGP_00070 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
GKDGPIGP_00071 5.8e-213 pldB 3.1.1.5 I Serine aminopeptidase, S33
GKDGPIGP_00072 3.4e-91 hsp20 O Hsp20/alpha crystallin family
GKDGPIGP_00073 1.6e-177 yddG EG EamA-like transporter family
GKDGPIGP_00074 2.4e-20
GKDGPIGP_00075 6e-255 S Putative esterase
GKDGPIGP_00076 0.0 lysX S Uncharacterised conserved protein (DUF2156)
GKDGPIGP_00077 4.8e-201 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GKDGPIGP_00078 4.4e-132 S Pyridoxamine 5'-phosphate oxidase
GKDGPIGP_00079 1.4e-198 S Fic/DOC family
GKDGPIGP_00080 4.1e-163 M Glycosyltransferase like family 2
GKDGPIGP_00081 0.0 KL Domain of unknown function (DUF3427)
GKDGPIGP_00082 7.6e-58 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
GKDGPIGP_00083 1.7e-51 ybjQ S Putative heavy-metal-binding
GKDGPIGP_00084 3.5e-144 yplQ S Haemolysin-III related
GKDGPIGP_00086 2.9e-259 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
GKDGPIGP_00087 3.3e-214 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
GKDGPIGP_00088 0.0 cadA P E1-E2 ATPase
GKDGPIGP_00089 3.4e-277 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
GKDGPIGP_00090 1.5e-172 htpX O Belongs to the peptidase M48B family
GKDGPIGP_00092 3.9e-173 yicL EG EamA-like transporter family
GKDGPIGP_00093 6.1e-199 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
GKDGPIGP_00094 9.8e-252 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GKDGPIGP_00095 2.6e-280 clcA P Voltage gated chloride channel
GKDGPIGP_00096 1.5e-133 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GKDGPIGP_00097 3.3e-57 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GKDGPIGP_00098 3.2e-203 K helix_turn _helix lactose operon repressor
GKDGPIGP_00100 5.9e-296 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
GKDGPIGP_00101 1.7e-277 scrT G Transporter major facilitator family protein
GKDGPIGP_00102 8.2e-180 K helix_turn _helix lactose operon repressor
GKDGPIGP_00103 3.8e-254 yhjE EGP Sugar (and other) transporter
GKDGPIGP_00104 2.4e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
GKDGPIGP_00105 3.7e-204 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
GKDGPIGP_00106 7.6e-146 S Psort location Cytoplasmic, score
GKDGPIGP_00107 1.2e-191 K Transcriptional regulator
GKDGPIGP_00108 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
GKDGPIGP_00109 6.8e-187 K Psort location Cytoplasmic, score
GKDGPIGP_00110 0.0 M cell wall anchor domain protein
GKDGPIGP_00111 0.0 M domain protein
GKDGPIGP_00112 1.6e-174 3.4.22.70 M Sortase family
GKDGPIGP_00113 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
GKDGPIGP_00114 0.0 malL 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
GKDGPIGP_00115 4e-234 malE G Bacterial extracellular solute-binding protein
GKDGPIGP_00116 2.7e-255 malF G Binding-protein-dependent transport system inner membrane component
GKDGPIGP_00117 6.5e-165 malG G Binding-protein-dependent transport system inner membrane component
GKDGPIGP_00118 5.5e-144 traX S TraX protein
GKDGPIGP_00119 2.8e-193 K Psort location Cytoplasmic, score
GKDGPIGP_00120 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 M Aamy_C
GKDGPIGP_00121 0.0 dnaK O Heat shock 70 kDa protein
GKDGPIGP_00122 1e-58 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GKDGPIGP_00123 9.4e-157 dnaJ1 O DnaJ molecular chaperone homology domain
GKDGPIGP_00124 1.2e-103 hspR K transcriptional regulator, MerR family
GKDGPIGP_00125 3.1e-17 F Psort location CytoplasmicMembrane, score 10.00
GKDGPIGP_00126 1.5e-114 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
GKDGPIGP_00127 1.1e-141 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
GKDGPIGP_00128 2.3e-127 S HAD hydrolase, family IA, variant 3
GKDGPIGP_00129 1.6e-134 dedA S SNARE associated Golgi protein
GKDGPIGP_00130 5.8e-125 cpaE D bacterial-type flagellum organization
GKDGPIGP_00131 9.1e-192 cpaF U Type II IV secretion system protein
GKDGPIGP_00132 1.2e-74 U Type ii secretion system
GKDGPIGP_00133 3.1e-116 gspF NU Type II secretion system (T2SS), protein F
GKDGPIGP_00134 1.1e-41 S Protein of unknown function (DUF4244)
GKDGPIGP_00135 3.7e-58 U TadE-like protein
GKDGPIGP_00136 6.5e-54 S TIGRFAM helicase secretion neighborhood TadE-like protein
GKDGPIGP_00137 1.2e-216 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
GKDGPIGP_00138 6.5e-97 K Bacterial regulatory proteins, tetR family
GKDGPIGP_00139 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
GKDGPIGP_00140 8.7e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GKDGPIGP_00141 1e-20 K DNA-binding helix-turn-helix protein
GKDGPIGP_00142 2.9e-57 K DNA-binding helix-turn-helix protein
GKDGPIGP_00143 1.7e-114 K Cro/C1-type HTH DNA-binding domain
GKDGPIGP_00144 2.1e-165 K Replication initiation factor
GKDGPIGP_00145 3.6e-31 L Excisionase from transposon Tn916
GKDGPIGP_00147 5.9e-177 L COG COG4974 Site-specific recombinase XerD
GKDGPIGP_00148 8.9e-202 3.4.22.70 M Sortase family
GKDGPIGP_00149 4.8e-69 V Abi-like protein
GKDGPIGP_00150 3.6e-193 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
GKDGPIGP_00151 1.3e-134 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
GKDGPIGP_00152 9.4e-98 askB 1.1.1.3, 2.7.2.4 E ACT domain
GKDGPIGP_00153 9e-214 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GKDGPIGP_00154 9.6e-112
GKDGPIGP_00155 6.4e-59 L Transposase and inactivated derivatives IS30 family
GKDGPIGP_00156 3.6e-148 L IstB-like ATP binding protein
GKDGPIGP_00157 2e-239 L PFAM Integrase catalytic
GKDGPIGP_00158 1.4e-40 L Transposase and inactivated derivatives IS30 family
GKDGPIGP_00159 1.3e-199 P Bacterial extracellular solute-binding protein
GKDGPIGP_00160 2.4e-151 U Binding-protein-dependent transport system inner membrane component
GKDGPIGP_00161 5.8e-161 U Binding-protein-dependent transport system inner membrane component
GKDGPIGP_00162 4.8e-202 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
GKDGPIGP_00163 1.3e-159 I type I phosphodiesterase nucleotide pyrophosphatase
GKDGPIGP_00165 1.2e-08 L IstB-like ATP binding protein
GKDGPIGP_00166 4.7e-56 L IstB-like ATP binding protein
GKDGPIGP_00167 6.7e-289 L PFAM Integrase catalytic
GKDGPIGP_00168 4e-175 L Domain of unknown function (DUF4862)
GKDGPIGP_00169 9.6e-170 2.7.1.2 GK ROK family
GKDGPIGP_00170 1.3e-125 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
GKDGPIGP_00171 9.8e-160 3.5.1.106 I carboxylic ester hydrolase activity
GKDGPIGP_00172 1.3e-303 E Bacterial extracellular solute-binding proteins, family 5 Middle
GKDGPIGP_00173 4.6e-153 oppB6 EP Binding-protein-dependent transport system inner membrane component
GKDGPIGP_00174 0.0 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
GKDGPIGP_00175 1.7e-148 oppF E ATPases associated with a variety of cellular activities
GKDGPIGP_00176 7.7e-180 nanL 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
GKDGPIGP_00177 3.2e-147 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GKDGPIGP_00178 4.5e-13 nagA 3.5.1.25 G Amidohydrolase family
GKDGPIGP_00179 0.0 nanI 3.2.1.18 GH33 G BNR repeat-like domain
GKDGPIGP_00180 2.8e-243 P Domain of unknown function (DUF4143)
GKDGPIGP_00181 1e-151 K FCD
GKDGPIGP_00182 3.2e-275 S Calcineurin-like phosphoesterase
GKDGPIGP_00183 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GKDGPIGP_00184 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
GKDGPIGP_00185 1.3e-170 3.6.1.27 I PAP2 superfamily
GKDGPIGP_00186 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GKDGPIGP_00187 1.6e-115 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GKDGPIGP_00188 7.8e-208 holB 2.7.7.7 L DNA polymerase III
GKDGPIGP_00189 5.2e-105 K helix_turn _helix lactose operon repressor
GKDGPIGP_00190 3.3e-37 ptsH G PTS HPr component phosphorylation site
GKDGPIGP_00192 7.8e-294 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GKDGPIGP_00193 3.8e-61 3.4.17.14 M domain, Protein
GKDGPIGP_00194 2.5e-106 S Phosphatidylethanolamine-binding protein
GKDGPIGP_00195 0.0 pepD E Peptidase family C69
GKDGPIGP_00196 1.8e-289 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
GKDGPIGP_00197 3.3e-61 S Macrophage migration inhibitory factor (MIF)
GKDGPIGP_00198 8.4e-96 S GtrA-like protein
GKDGPIGP_00199 9.7e-248 EGP Major facilitator Superfamily
GKDGPIGP_00200 1.1e-124 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
GKDGPIGP_00201 1.1e-117
GKDGPIGP_00202 2e-227 3.1.1.31 G Lactonase, 7-bladed beta-propeller
GKDGPIGP_00203 2.4e-144 S Protein of unknown function (DUF805)
GKDGPIGP_00205 4.2e-294 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GKDGPIGP_00208 4.7e-69
GKDGPIGP_00209 1.7e-125 yoaK S Protein of unknown function (DUF1275)
GKDGPIGP_00210 2e-55 ydeP K HxlR-like helix-turn-helix
GKDGPIGP_00211 1.2e-79 XK27_10430 S NAD(P)H-binding
GKDGPIGP_00212 6.8e-306 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
GKDGPIGP_00213 4.5e-267 EGP Major Facilitator Superfamily
GKDGPIGP_00214 0.0 1.3.3.6, 2.3.1.39 IQ [acyl-carrier-protein] S-malonyltransferase activity
GKDGPIGP_00215 0.0 H Beta-ketoacyl synthase, C-terminal domain
GKDGPIGP_00216 2.8e-114 K WHG domain
GKDGPIGP_00217 4.2e-110 pptA 6.3.2.14 Q 4'-phosphopantetheinyl transferase superfamily
GKDGPIGP_00218 2.6e-91
GKDGPIGP_00219 2e-166
GKDGPIGP_00220 5.4e-152 L HNH endonuclease
GKDGPIGP_00222 6.2e-46 L Transposase
GKDGPIGP_00223 9.6e-136 tnp7109-21 L Integrase core domain
GKDGPIGP_00224 1.7e-173 S Domain of unknown function (DUF4928)
GKDGPIGP_00225 6.7e-231 dcm 2.1.1.37 L Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
GKDGPIGP_00226 9.3e-283 S FRG domain
GKDGPIGP_00227 0.0 T AAA domain
GKDGPIGP_00228 1.8e-27
GKDGPIGP_00229 4.1e-282 L Phage integrase, N-terminal SAM-like domain
GKDGPIGP_00231 0.0 efeU_1 P Iron permease FTR1 family
GKDGPIGP_00232 1.6e-99 tpd P Fe2+ transport protein
GKDGPIGP_00233 1.7e-232 S Predicted membrane protein (DUF2318)
GKDGPIGP_00234 7e-221 macB_2 V ABC transporter permease
GKDGPIGP_00235 7.2e-200 Z012_06715 V FtsX-like permease family
GKDGPIGP_00236 4.5e-146 macB V ABC transporter, ATP-binding protein
GKDGPIGP_00237 1.7e-67 S FMN_bind
GKDGPIGP_00238 1.6e-100 K Psort location Cytoplasmic, score 8.87
GKDGPIGP_00239 2e-305 pip S YhgE Pip domain protein
GKDGPIGP_00240 0.0 pip S YhgE Pip domain protein
GKDGPIGP_00241 3e-251 S Putative ABC-transporter type IV
GKDGPIGP_00242 1.5e-272 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GKDGPIGP_00243 4.8e-138 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
GKDGPIGP_00244 3.7e-193 opcA G Glucose-6-phosphate dehydrogenase subunit
GKDGPIGP_00245 2.9e-303 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GKDGPIGP_00246 2.8e-292 3.5.2.6 V Beta-lactamase enzyme family
GKDGPIGP_00248 1.1e-302 pepD E Peptidase family C69
GKDGPIGP_00249 1.1e-197 XK27_01805 M Glycosyltransferase like family 2
GKDGPIGP_00250 1e-151 icaR K Bacterial regulatory proteins, tetR family
GKDGPIGP_00251 9.9e-172 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
GKDGPIGP_00252 1e-227 amt U Ammonium Transporter Family
GKDGPIGP_00253 1e-54 glnB K Nitrogen regulatory protein P-II
GKDGPIGP_00254 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
GKDGPIGP_00255 1.9e-240 dinF V MatE
GKDGPIGP_00256 3.3e-257 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
GKDGPIGP_00257 8.6e-257 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
GKDGPIGP_00258 3.7e-142 cobQ S CobB/CobQ-like glutamine amidotransferase domain
GKDGPIGP_00259 5.5e-38 S granule-associated protein
GKDGPIGP_00260 0.0 ubiB S ABC1 family
GKDGPIGP_00261 3.3e-269 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
GKDGPIGP_00262 2.2e-154 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
GKDGPIGP_00263 1.3e-187 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GKDGPIGP_00264 4.6e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
GKDGPIGP_00265 6.8e-76 ssb1 L Single-stranded DNA-binding protein
GKDGPIGP_00266 2e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GKDGPIGP_00267 2.7e-71 rplI J Binds to the 23S rRNA
GKDGPIGP_00270 8.9e-159 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
GKDGPIGP_00271 3.5e-38 L Transposase
GKDGPIGP_00272 3.8e-117
GKDGPIGP_00273 3.1e-130 V ABC transporter
GKDGPIGP_00274 1.3e-111 K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
GKDGPIGP_00275 2.5e-209 2.7.13.3 T Histidine kinase
GKDGPIGP_00276 1.1e-204 EGP Major Facilitator Superfamily
GKDGPIGP_00277 6.2e-43
GKDGPIGP_00278 8.6e-60
GKDGPIGP_00279 1e-127 xerH L Belongs to the 'phage' integrase family
GKDGPIGP_00280 1.9e-130 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
GKDGPIGP_00281 0.0 pacS 1.9.3.1, 3.6.3.54 P E1-E2 ATPase
GKDGPIGP_00282 1.3e-42 csoR S Metal-sensitive transcriptional repressor
GKDGPIGP_00283 1.8e-209 rmuC S RmuC family
GKDGPIGP_00284 3.1e-110 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GKDGPIGP_00285 5.3e-170 spoU 2.1.1.185 J RNA methyltransferase TrmH family
GKDGPIGP_00286 1.9e-167 V ABC transporter
GKDGPIGP_00287 8.2e-180
GKDGPIGP_00288 5.6e-55 K Psort location Cytoplasmic, score
GKDGPIGP_00289 2.2e-53 K Psort location Cytoplasmic, score
GKDGPIGP_00290 2.7e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GKDGPIGP_00291 5.1e-287 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
GKDGPIGP_00292 1.3e-282 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GKDGPIGP_00293 1.1e-195 2.3.1.57 J Acetyltransferase (GNAT) domain
GKDGPIGP_00294 3.3e-52 S Protein of unknown function (DUF2469)
GKDGPIGP_00295 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
GKDGPIGP_00296 2.7e-293 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
GKDGPIGP_00297 6.2e-46 pabC 2.6.1.42, 4.1.3.38 EH Amino-transferase class IV
GKDGPIGP_00298 1.4e-49 L Transposase
GKDGPIGP_00299 1.1e-23 L Transposase
GKDGPIGP_00300 5.1e-50 K helix_turn_helix, arabinose operon control protein
GKDGPIGP_00301 2.6e-154 araN G Bacterial extracellular solute-binding protein
GKDGPIGP_00302 9.5e-121 lacF P Binding-protein-dependent transport system inner membrane component
GKDGPIGP_00303 1.3e-114 araQ U Binding-protein-dependent transport system inner membrane component
GKDGPIGP_00304 2.1e-130 rafA 3.2.1.22 G alpha-galactosidase
GKDGPIGP_00305 6.8e-63 tyrA 5.4.99.5 E Chorismate mutase type II
GKDGPIGP_00306 0.0 S domain protein
GKDGPIGP_00307 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
GKDGPIGP_00308 2.6e-283 E Bacterial extracellular solute-binding proteins, family 5 Middle
GKDGPIGP_00309 5.7e-126 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GKDGPIGP_00310 6.9e-139 KT Transcriptional regulatory protein, C terminal
GKDGPIGP_00311 4.3e-116
GKDGPIGP_00312 3.7e-97 mntP P Probably functions as a manganese efflux pump
GKDGPIGP_00313 2.8e-90 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
GKDGPIGP_00314 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
GKDGPIGP_00315 0.0 K RNA polymerase II activating transcription factor binding
GKDGPIGP_00317 1.6e-207 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
GKDGPIGP_00318 6.4e-148 atpB C it plays a direct role in the translocation of protons across the membrane
GKDGPIGP_00319 1.7e-29 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GKDGPIGP_00320 2.9e-61 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GKDGPIGP_00321 2.4e-150 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GKDGPIGP_00322 1.3e-309 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GKDGPIGP_00323 5.5e-164 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GKDGPIGP_00324 6.1e-282 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GKDGPIGP_00325 3.6e-48 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
GKDGPIGP_00326 1.4e-130 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
GKDGPIGP_00327 1.2e-158 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
GKDGPIGP_00328 3.5e-182
GKDGPIGP_00329 1.9e-178
GKDGPIGP_00330 4.5e-172 trxA2 O Tetratricopeptide repeat
GKDGPIGP_00331 1.5e-117 cyaA 4.6.1.1 S CYTH
GKDGPIGP_00334 3.6e-64 psp1 3.5.99.10 J Endoribonuclease L-PSP
GKDGPIGP_00335 4.3e-188 plsC2 2.3.1.51 I Phosphate acyltransferases
GKDGPIGP_00336 4.6e-180 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
GKDGPIGP_00337 2.4e-228 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
GKDGPIGP_00338 2.6e-219 P Bacterial extracellular solute-binding protein
GKDGPIGP_00339 2.4e-159 U Binding-protein-dependent transport system inner membrane component
GKDGPIGP_00340 1.4e-151 U Binding-protein-dependent transport system inner membrane component
GKDGPIGP_00341 3.1e-237 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
GKDGPIGP_00342 4.9e-185 S CAAX protease self-immunity
GKDGPIGP_00343 6.5e-137 M Mechanosensitive ion channel
GKDGPIGP_00344 8.6e-273 aspA 4.3.1.1 E Fumarase C C-terminus
GKDGPIGP_00345 6e-10 L Transposase DDE domain
GKDGPIGP_00346 5.7e-133 S Sulfite exporter TauE/SafE
GKDGPIGP_00347 1.8e-261 aslB C Iron-sulfur cluster-binding domain
GKDGPIGP_00348 2.9e-193 K helix_turn _helix lactose operon repressor
GKDGPIGP_00349 4.7e-306 Z012_09690 P Domain of unknown function (DUF4976)
GKDGPIGP_00350 1.7e-265 G Bacterial extracellular solute-binding protein
GKDGPIGP_00351 2.9e-165 malC P Binding-protein-dependent transport system inner membrane component
GKDGPIGP_00352 1.6e-177 P Binding-protein-dependent transport system inner membrane component
GKDGPIGP_00353 7.2e-236 S AAA domain
GKDGPIGP_00354 3e-41 L Transposase, Mutator family
GKDGPIGP_00355 1.3e-106 K Bacterial regulatory proteins, tetR family
GKDGPIGP_00356 1.9e-258 MA20_36090 S Psort location Cytoplasmic, score 8.87
GKDGPIGP_00357 1.2e-85 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
GKDGPIGP_00358 2e-80 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
GKDGPIGP_00359 1.3e-78 ams 2.4.1.4, 3.2.1.1, 5.4.99.16 GH13 G Alpha amylase, catalytic domain
GKDGPIGP_00360 1.2e-113 P Sodium/hydrogen exchanger family
GKDGPIGP_00362 1.6e-22
GKDGPIGP_00363 1e-80
GKDGPIGP_00364 0.0 Q von Willebrand factor (vWF) type A domain
GKDGPIGP_00365 3.3e-278 M LPXTG cell wall anchor motif
GKDGPIGP_00367 6.4e-51
GKDGPIGP_00368 7.6e-110
GKDGPIGP_00369 1e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GKDGPIGP_00370 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
GKDGPIGP_00371 4.2e-119 V ABC transporter, ATP-binding protein
GKDGPIGP_00372 7.6e-33 macB_7 V FtsX-like permease family
GKDGPIGP_00373 1.3e-89 lemA S LemA family
GKDGPIGP_00374 0.0 S Predicted membrane protein (DUF2207)
GKDGPIGP_00375 2.6e-26 S Predicted membrane protein (DUF2207)
GKDGPIGP_00376 3.2e-24 S Predicted membrane protein (DUF2207)
GKDGPIGP_00377 5.6e-62 S Predicted membrane protein (DUF2207)
GKDGPIGP_00378 1.1e-53 S Predicted membrane protein (DUF2207)
GKDGPIGP_00379 1.5e-19
GKDGPIGP_00380 3.8e-167 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
GKDGPIGP_00381 3.3e-197 iunH1 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
GKDGPIGP_00382 5.6e-122 K helix_turn _helix lactose operon repressor
GKDGPIGP_00383 6.3e-142 G Bacterial extracellular solute-binding protein
GKDGPIGP_00384 7.2e-119 U Binding-protein-dependent transport system inner membrane component
GKDGPIGP_00385 7.6e-112 U Binding-protein-dependent transport system inner membrane component
GKDGPIGP_00386 4.5e-225
GKDGPIGP_00387 4.6e-166 2.7.11.1 S Pfam:HipA_N
GKDGPIGP_00388 8.2e-45 K Helix-turn-helix XRE-family like proteins
GKDGPIGP_00389 1.3e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GKDGPIGP_00390 6.1e-35 CP_0960 S Belongs to the UPF0109 family
GKDGPIGP_00391 3.9e-57 rpsP J Belongs to the bacterial ribosomal protein bS16 family
GKDGPIGP_00392 1e-164 S Endonuclease/Exonuclease/phosphatase family
GKDGPIGP_00393 7.4e-260 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GKDGPIGP_00394 3e-162 P Cation efflux family
GKDGPIGP_00395 0.0 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
GKDGPIGP_00396 9.5e-135 guaA1 6.3.5.2 F Peptidase C26
GKDGPIGP_00397 0.0 yjjK S ABC transporter
GKDGPIGP_00398 2.3e-72 vapC S Toxic component of a toxin-antitoxin (TA) module. An RNase
GKDGPIGP_00399 3.9e-44 stbC S Plasmid stability protein
GKDGPIGP_00400 4e-93 ilvN 2.2.1.6 E ACT domain
GKDGPIGP_00401 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
GKDGPIGP_00402 9.7e-135 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
GKDGPIGP_00403 9.3e-21 rpmF J Belongs to the bacterial ribosomal protein bL32 family
GKDGPIGP_00404 7.6e-117 yceD S Uncharacterized ACR, COG1399
GKDGPIGP_00405 7.9e-87
GKDGPIGP_00406 6e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GKDGPIGP_00407 2.4e-49 S Protein of unknown function (DUF3039)
GKDGPIGP_00408 1.6e-196 yghZ C Aldo/keto reductase family
GKDGPIGP_00409 6.3e-78 soxR K MerR, DNA binding
GKDGPIGP_00410 4.5e-117
GKDGPIGP_00411 8.5e-251 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GKDGPIGP_00412 1.1e-144 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
GKDGPIGP_00413 3.7e-137 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GKDGPIGP_00414 7.3e-178 S Auxin Efflux Carrier
GKDGPIGP_00417 0.0 pgi 5.3.1.9 G Belongs to the GPI family
GKDGPIGP_00418 1.4e-262 abcT3 P ATPases associated with a variety of cellular activities
GKDGPIGP_00419 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
GKDGPIGP_00421 8.1e-60 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
GKDGPIGP_00422 1.5e-164 lepB 3.4.21.89 U Belongs to the peptidase S26 family
GKDGPIGP_00423 8e-157 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GKDGPIGP_00424 1.5e-208 K helix_turn _helix lactose operon repressor
GKDGPIGP_00425 2.7e-12 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
GKDGPIGP_00426 0.0 fadD 6.2.1.3 I AMP-binding enzyme
GKDGPIGP_00427 1.1e-40 araE EGP Major facilitator Superfamily
GKDGPIGP_00428 1.7e-20 araE EGP Major facilitator Superfamily
GKDGPIGP_00430 0.0 cydD V ABC transporter transmembrane region
GKDGPIGP_00431 7.1e-261 G Bacterial extracellular solute-binding protein
GKDGPIGP_00432 9.1e-170 malC G Binding-protein-dependent transport system inner membrane component
GKDGPIGP_00433 4.4e-167 G ABC transporter permease
GKDGPIGP_00434 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GKDGPIGP_00435 3.6e-191 K helix_turn _helix lactose operon repressor
GKDGPIGP_00436 0.0 ganB 3.2.1.89 G Glycosyl hydrolase family 53
GKDGPIGP_00437 3.3e-166 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
GKDGPIGP_00438 2.4e-141 L Protein of unknown function (DUF1524)
GKDGPIGP_00439 1e-235 mntH P H( )-stimulated, divalent metal cation uptake system
GKDGPIGP_00440 9.6e-281 EGP Major facilitator Superfamily
GKDGPIGP_00441 0.0 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
GKDGPIGP_00442 5.5e-234 rfbP 2.7.8.6 M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
GKDGPIGP_00443 9.7e-109 3.1.3.48 T Low molecular weight phosphatase family
GKDGPIGP_00444 4.6e-114 S Psort location CytoplasmicMembrane, score 9.99
GKDGPIGP_00446 4.2e-78 L Transposase and inactivated derivatives IS30 family
GKDGPIGP_00447 3.6e-148 L IstB-like ATP binding protein
GKDGPIGP_00448 2.8e-295 L PFAM Integrase catalytic
GKDGPIGP_00449 4.3e-82 L Transposase and inactivated derivatives IS30 family
GKDGPIGP_00450 3.4e-139 M Psort location Cytoplasmic, score 8.87
GKDGPIGP_00451 3.9e-52 GT4 M Psort location Cytoplasmic, score 8.87
GKDGPIGP_00452 3.2e-09
GKDGPIGP_00453 8.9e-63 C Polysaccharide pyruvyl transferase
GKDGPIGP_00454 2.9e-119 S Psort location CytoplasmicMembrane, score 9.99
GKDGPIGP_00455 1.3e-46 M Glycosyltransferase like family 2
GKDGPIGP_00456 1.2e-178 menD 2.2.1.9 H Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
GKDGPIGP_00457 6.4e-55 L Transposase, Mutator family
GKDGPIGP_00458 3.9e-07
GKDGPIGP_00460 1.4e-10 L HTH-like domain
GKDGPIGP_00461 5e-21 L PFAM Integrase catalytic
GKDGPIGP_00462 1.4e-86
GKDGPIGP_00463 6.8e-67
GKDGPIGP_00464 1.5e-55 L Transposase, Mutator family
GKDGPIGP_00465 5.7e-84 2.7.7.49 L Transposase, Mutator family
GKDGPIGP_00466 1.1e-29 L Transposase
GKDGPIGP_00467 1.5e-268 L PFAM Integrase catalytic
GKDGPIGP_00468 7.2e-228 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GKDGPIGP_00469 4.2e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
GKDGPIGP_00470 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
GKDGPIGP_00471 3.2e-189 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GKDGPIGP_00472 1.2e-131 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GKDGPIGP_00473 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GKDGPIGP_00474 7.2e-119 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
GKDGPIGP_00475 6.5e-125 apl 3.1.3.1 S SNARE associated Golgi protein
GKDGPIGP_00476 1.5e-286 arc O AAA ATPase forming ring-shaped complexes
GKDGPIGP_00477 7.6e-137 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GKDGPIGP_00478 2.6e-280 manR K PRD domain
GKDGPIGP_00479 3e-72 H Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GKDGPIGP_00480 1.1e-78 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GKDGPIGP_00481 7.9e-46 fruA 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
GKDGPIGP_00482 4.8e-162 G Phosphotransferase System
GKDGPIGP_00483 2.1e-134 alsE 5.1.3.1 G Ribulose-phosphate 3 epimerase family
GKDGPIGP_00484 0.0 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
GKDGPIGP_00485 8.9e-175 hisN 3.1.3.25 G Inositol monophosphatase family
GKDGPIGP_00487 5.4e-286 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
GKDGPIGP_00488 8.1e-42 hup L Belongs to the bacterial histone-like protein family
GKDGPIGP_00489 0.0 S Lysylphosphatidylglycerol synthase TM region
GKDGPIGP_00490 3.3e-280 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
GKDGPIGP_00491 1.3e-111 ykoE S ABC-type cobalt transport system, permease component
GKDGPIGP_00492 3.2e-252 S PGAP1-like protein
GKDGPIGP_00493 6.9e-56
GKDGPIGP_00494 7.1e-152 S von Willebrand factor (vWF) type A domain
GKDGPIGP_00495 1.3e-188 S von Willebrand factor (vWF) type A domain
GKDGPIGP_00496 3.9e-85
GKDGPIGP_00497 1.3e-163 S Protein of unknown function DUF58
GKDGPIGP_00498 1.7e-188 moxR S ATPase family associated with various cellular activities (AAA)
GKDGPIGP_00499 3.8e-133 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GKDGPIGP_00500 4.5e-83 S LytR cell envelope-related transcriptional attenuator
GKDGPIGP_00501 6.1e-38 K 'Cold-shock' DNA-binding domain
GKDGPIGP_00502 2.7e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
GKDGPIGP_00503 4.2e-33 S Proteins of 100 residues with WXG
GKDGPIGP_00504 4.3e-99
GKDGPIGP_00505 2e-132 KT Response regulator receiver domain protein
GKDGPIGP_00506 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GKDGPIGP_00507 6.5e-66 cspB K 'Cold-shock' DNA-binding domain
GKDGPIGP_00508 3.7e-180 S Protein of unknown function (DUF3027)
GKDGPIGP_00509 1.4e-178 uspA T Belongs to the universal stress protein A family
GKDGPIGP_00510 0.0 clpC O ATPase family associated with various cellular activities (AAA)
GKDGPIGP_00511 3e-26 K helix_turn_helix, arabinose operon control protein
GKDGPIGP_00512 3e-132 xylE U Sugar (and other) transporter
GKDGPIGP_00513 9.6e-59 lipA I Hydrolase, alpha beta domain protein
GKDGPIGP_00514 0.0 3.1.3.5 F 5'-nucleotidase, C-terminal domain
GKDGPIGP_00515 1.7e-223 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
GKDGPIGP_00516 5.9e-261 hisS 6.1.1.21 J Histidyl-tRNA synthetase
GKDGPIGP_00517 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
GKDGPIGP_00518 6.1e-102 S Aminoacyl-tRNA editing domain
GKDGPIGP_00519 3.1e-153 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
GKDGPIGP_00520 5.3e-147 gluB ET Belongs to the bacterial solute-binding protein 3 family
GKDGPIGP_00521 1.7e-109 gluC E Binding-protein-dependent transport system inner membrane component
GKDGPIGP_00522 1.2e-194 gluD E Binding-protein-dependent transport system inner membrane component
GKDGPIGP_00523 1e-287 phoN I PAP2 superfamily
GKDGPIGP_00524 6.6e-111 argO S LysE type translocator
GKDGPIGP_00525 6.3e-287 ydfD EK Alanine-glyoxylate amino-transferase
GKDGPIGP_00527 4e-198 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
GKDGPIGP_00528 0.0 helY L DEAD DEAH box helicase
GKDGPIGP_00529 1.8e-251 rarA L Recombination factor protein RarA
GKDGPIGP_00530 6.9e-11 KT Transcriptional regulatory protein, C terminal
GKDGPIGP_00531 2.3e-33 mtrB 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
GKDGPIGP_00532 5.5e-251 EGP Major facilitator Superfamily
GKDGPIGP_00533 3.8e-187 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
GKDGPIGP_00534 6.9e-52
GKDGPIGP_00535 1.6e-53 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
GKDGPIGP_00536 3.1e-47 yhbY J CRS1_YhbY
GKDGPIGP_00537 0.0 ecfA GP ABC transporter, ATP-binding protein
GKDGPIGP_00538 3.6e-93 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GKDGPIGP_00539 6.4e-198 S Glycosyltransferase, group 2 family protein
GKDGPIGP_00540 2.5e-149 C Putative TM nitroreductase
GKDGPIGP_00541 3.2e-141 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
GKDGPIGP_00542 3e-303 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
GKDGPIGP_00543 6.2e-241 lacY P LacY proton/sugar symporter
GKDGPIGP_00544 1.8e-195 K helix_turn _helix lactose operon repressor
GKDGPIGP_00545 1e-257 O SERine Proteinase INhibitors
GKDGPIGP_00546 1.3e-190
GKDGPIGP_00547 6.1e-123 K helix_turn_helix, Lux Regulon
GKDGPIGP_00548 3.4e-213 2.7.13.3 T Histidine kinase
GKDGPIGP_00549 7.1e-248 ydjK G Sugar (and other) transporter
GKDGPIGP_00550 5.6e-62 S Thiamine-binding protein
GKDGPIGP_00551 8.7e-145 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
GKDGPIGP_00552 1.7e-229 O AAA domain (Cdc48 subfamily)
GKDGPIGP_00553 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
GKDGPIGP_00554 3.1e-154 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
GKDGPIGP_00555 6.7e-297 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
GKDGPIGP_00556 4.8e-248 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GKDGPIGP_00557 1.2e-211 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GKDGPIGP_00558 5.9e-69 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
GKDGPIGP_00559 4.9e-45 yggT S YGGT family
GKDGPIGP_00560 5.3e-22 tccB2 V DivIVA protein
GKDGPIGP_00561 5.4e-90 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GKDGPIGP_00562 9e-178 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
GKDGPIGP_00563 1.7e-201 K WYL domain
GKDGPIGP_00564 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
GKDGPIGP_00565 1.4e-68 yneG S Domain of unknown function (DUF4186)
GKDGPIGP_00566 9.6e-166 dkgA 1.1.1.346 C Aldo/keto reductase family
GKDGPIGP_00567 0.0 4.2.1.53 S MCRA family
GKDGPIGP_00568 9.2e-10
GKDGPIGP_00569 9e-167 4.2.1.68 M Enolase C-terminal domain-like
GKDGPIGP_00570 4.5e-146 IQ KR domain
GKDGPIGP_00571 4.3e-152 S Amidohydrolase
GKDGPIGP_00572 7.5e-166 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
GKDGPIGP_00573 0.0 2.4.1.230, 3.2.1.51 GH65,GH95 G Glycosyl hydrolase family 65, N-terminal domain
GKDGPIGP_00574 7.7e-157 yvgN 1.1.1.346 S Aldo/keto reductase family
GKDGPIGP_00575 1.1e-53 acyP 3.6.1.7 C Acylphosphatase
GKDGPIGP_00576 1.5e-253 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
GKDGPIGP_00577 1.4e-220 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
GKDGPIGP_00578 4.6e-111 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
GKDGPIGP_00579 2.3e-99
GKDGPIGP_00580 1.4e-121 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
GKDGPIGP_00581 4.1e-130 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
GKDGPIGP_00582 8.9e-278 S Uncharacterized protein conserved in bacteria (DUF2252)
GKDGPIGP_00583 2.1e-265 glnA2 6.3.1.2 E glutamine synthetase
GKDGPIGP_00584 3.2e-160 EGP Major facilitator Superfamily
GKDGPIGP_00585 5.4e-30 EGP Major facilitator Superfamily
GKDGPIGP_00586 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
GKDGPIGP_00587 3.4e-123 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
GKDGPIGP_00588 1.2e-272 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GKDGPIGP_00589 1.7e-176 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
GKDGPIGP_00590 7.7e-161 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GKDGPIGP_00591 6.9e-130 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GKDGPIGP_00592 3e-47 M Lysin motif
GKDGPIGP_00593 1.2e-76 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GKDGPIGP_00594 7.5e-230 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
GKDGPIGP_00595 0.0 L DNA helicase
GKDGPIGP_00596 1.3e-93 mraZ K Belongs to the MraZ family
GKDGPIGP_00597 5.1e-190 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
GKDGPIGP_00598 4e-67 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
GKDGPIGP_00599 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
GKDGPIGP_00600 2e-155 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GKDGPIGP_00601 3e-241 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
GKDGPIGP_00602 1.2e-205 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GKDGPIGP_00603 1.1e-272 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GKDGPIGP_00604 9.7e-225 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
GKDGPIGP_00605 5.9e-219 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GKDGPIGP_00606 4.4e-283 murC 6.3.2.8 M Belongs to the MurCDEF family
GKDGPIGP_00607 7.3e-173 ftsQ 6.3.2.4 D Cell division protein FtsQ
GKDGPIGP_00608 7.7e-14
GKDGPIGP_00609 2.2e-87 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GKDGPIGP_00610 2.5e-96 G Major Facilitator Superfamily
GKDGPIGP_00611 1.2e-168 2.7.1.4 G pfkB family carbohydrate kinase
GKDGPIGP_00612 2.3e-226 GK ROK family
GKDGPIGP_00613 2.2e-165 2.7.1.2 GK ROK family
GKDGPIGP_00614 8.1e-210 GK ROK family
GKDGPIGP_00615 6.2e-151 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GKDGPIGP_00616 6.5e-248 nagA 3.5.1.25 G Amidohydrolase family
GKDGPIGP_00617 6.6e-98 3.6.1.55 F NUDIX domain
GKDGPIGP_00618 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
GKDGPIGP_00619 1.2e-302 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
GKDGPIGP_00620 0.0 smc D Required for chromosome condensation and partitioning
GKDGPIGP_00621 2.3e-48 V Acetyltransferase (GNAT) domain
GKDGPIGP_00622 1.3e-20 V Acetyltransferase (GNAT) domain
GKDGPIGP_00623 1.6e-193 V Acetyltransferase (GNAT) domain
GKDGPIGP_00624 4e-292 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GKDGPIGP_00625 1.8e-136 sigH K Belongs to the sigma-70 factor family. ECF subfamily
GKDGPIGP_00626 3.3e-52
GKDGPIGP_00627 9.9e-185 galM 5.1.3.3 G Aldose 1-epimerase
GKDGPIGP_00628 1.9e-191 galM 5.1.3.3 G Aldose 1-epimerase
GKDGPIGP_00629 7.5e-183 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
GKDGPIGP_00630 4.2e-89 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GKDGPIGP_00631 1.3e-196 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
GKDGPIGP_00632 3.8e-136 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
GKDGPIGP_00633 3.2e-46 S Spermine/spermidine synthase domain
GKDGPIGP_00634 1.1e-112 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GKDGPIGP_00635 6.2e-25 rpmI J Ribosomal protein L35
GKDGPIGP_00636 1.3e-61 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GKDGPIGP_00637 9.3e-92 cdaR KT Putative sugar diacid recognition
GKDGPIGP_00638 2.3e-163 EG GntP family permease
GKDGPIGP_00639 1.3e-194 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
GKDGPIGP_00640 8.3e-160 xerD D recombinase XerD
GKDGPIGP_00641 2.2e-147 soj D CobQ CobB MinD ParA nucleotide binding domain protein
GKDGPIGP_00642 7e-151 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
GKDGPIGP_00643 1.5e-116 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GKDGPIGP_00644 6.1e-154 nrtR 3.6.1.55 F NUDIX hydrolase
GKDGPIGP_00645 4.9e-251 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
GKDGPIGP_00646 3.8e-301 nadB 1.3.5.4, 1.4.3.16, 2.4.2.19 H Catalyzes the oxidation of L-aspartate to iminoaspartate
GKDGPIGP_00647 2.5e-161 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, N-terminal domain
GKDGPIGP_00648 4.6e-241 iscS1 2.8.1.7 E Aminotransferase class-V
GKDGPIGP_00649 5.9e-19 naiP U Sugar (and other) transporter
GKDGPIGP_00650 0.0 V FtsX-like permease family
GKDGPIGP_00651 1.8e-136 V ATPases associated with a variety of cellular activities
GKDGPIGP_00652 7e-107 K Virulence activator alpha C-term
GKDGPIGP_00653 0.0 typA T Elongation factor G C-terminus
GKDGPIGP_00654 2.5e-77
GKDGPIGP_00655 2.9e-187 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
GKDGPIGP_00656 3.2e-189 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
GKDGPIGP_00657 4.5e-42
GKDGPIGP_00658 0.0 MV MacB-like periplasmic core domain
GKDGPIGP_00659 6.4e-148 V ABC transporter, ATP-binding protein
GKDGPIGP_00660 7.2e-189 xerC D Belongs to the 'phage' integrase family. XerC subfamily
GKDGPIGP_00661 0.0 E ABC transporter, substrate-binding protein, family 5
GKDGPIGP_00662 8.9e-154 dppB EP Binding-protein-dependent transport system inner membrane component
GKDGPIGP_00663 1.1e-173 dppC EP N-terminal TM domain of oligopeptide transport permease C
GKDGPIGP_00664 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
GKDGPIGP_00665 3.3e-171 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
GKDGPIGP_00666 8.1e-154 S Protein of unknown function (DUF3710)
GKDGPIGP_00667 3.8e-134 S Protein of unknown function (DUF3159)
GKDGPIGP_00668 2e-241 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GKDGPIGP_00669 2e-98
GKDGPIGP_00670 0.0 ctpE P E1-E2 ATPase
GKDGPIGP_00671 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
GKDGPIGP_00672 6.8e-121 E Psort location Cytoplasmic, score 8.87
GKDGPIGP_00673 2.2e-113 K helix_turn_helix, Lux Regulon
GKDGPIGP_00674 2.8e-135 ybhL S Belongs to the BI1 family
GKDGPIGP_00675 3.6e-166 ydeD EG EamA-like transporter family
GKDGPIGP_00676 5.2e-150 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
GKDGPIGP_00677 1.2e-277 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
GKDGPIGP_00678 5.3e-181 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GKDGPIGP_00679 2.4e-151 fic D Fic/DOC family
GKDGPIGP_00680 0.0 ftsK D FtsK SpoIIIE family protein
GKDGPIGP_00681 4.6e-117 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GKDGPIGP_00682 1.2e-92 cinA 3.5.1.42 S Belongs to the CinA family
GKDGPIGP_00683 4.2e-76 K Helix-turn-helix XRE-family like proteins
GKDGPIGP_00684 7e-39 S Protein of unknown function (DUF3046)
GKDGPIGP_00685 1.1e-196 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GKDGPIGP_00686 1.5e-101 recX S Modulates RecA activity
GKDGPIGP_00687 2.4e-113 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GKDGPIGP_00688 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GKDGPIGP_00689 1.8e-190 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
GKDGPIGP_00690 5.9e-118
GKDGPIGP_00691 6.2e-131 plsC2 2.3.1.51 I Phosphate acyltransferases
GKDGPIGP_00692 0.0 pknL 2.7.11.1 KLT PASTA
GKDGPIGP_00693 1.2e-44 pknL 2.7.11.1 KLT PASTA
GKDGPIGP_00694 1.4e-195 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
GKDGPIGP_00695 1.6e-114
GKDGPIGP_00696 8.2e-191 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
GKDGPIGP_00697 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
GKDGPIGP_00698 4.5e-222 G Major Facilitator Superfamily
GKDGPIGP_00699 1.7e-171 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GKDGPIGP_00700 0.0 lhr L DEAD DEAH box helicase
GKDGPIGP_00701 1.2e-48 K Psort location Cytoplasmic, score
GKDGPIGP_00702 5.2e-43 K Psort location Cytoplasmic, score
GKDGPIGP_00704 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
GKDGPIGP_00705 7.7e-233 S Type I phosphodiesterase / nucleotide pyrophosphatase
GKDGPIGP_00706 3.2e-147 S Protein of unknown function (DUF3071)
GKDGPIGP_00707 1.4e-47 S Domain of unknown function (DUF4193)
GKDGPIGP_00708 1.7e-84 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
GKDGPIGP_00709 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GKDGPIGP_00710 6e-102 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GKDGPIGP_00711 2.3e-74
GKDGPIGP_00713 1.3e-254 S HipA-like C-terminal domain
GKDGPIGP_00714 2.1e-171 S Fic/DOC family
GKDGPIGP_00715 7e-39
GKDGPIGP_00716 3.2e-21 L Integrase core domain
GKDGPIGP_00717 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
GKDGPIGP_00718 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
GKDGPIGP_00719 1.4e-175 srrA1 G Bacterial extracellular solute-binding protein
GKDGPIGP_00720 1.3e-123 G Binding-protein-dependent transport system inner membrane component
GKDGPIGP_00721 5.9e-125 lacG G Binding-protein-dependent transport system inner membrane component
GKDGPIGP_00722 1.8e-221 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
GKDGPIGP_00723 4.2e-139 K helix_turn _helix lactose operon repressor
GKDGPIGP_00724 4.9e-66 L PFAM Integrase catalytic
GKDGPIGP_00725 3e-150 L PFAM Integrase catalytic
GKDGPIGP_00726 6.3e-240 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
GKDGPIGP_00727 1.9e-255 S Metal-independent alpha-mannosidase (GH125)
GKDGPIGP_00728 2.5e-31
GKDGPIGP_00729 6.1e-131 C Putative TM nitroreductase
GKDGPIGP_00730 5.8e-169 EG EamA-like transporter family
GKDGPIGP_00731 5.9e-70 pdxH S Pfam:Pyridox_oxidase
GKDGPIGP_00732 7.7e-233 L ribosomal rna small subunit methyltransferase
GKDGPIGP_00733 7.1e-166 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
GKDGPIGP_00734 5.3e-170 corA P CorA-like Mg2+ transporter protein
GKDGPIGP_00735 1.6e-160 ET Bacterial periplasmic substrate-binding proteins
GKDGPIGP_00736 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
GKDGPIGP_00737 2.1e-76 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
GKDGPIGP_00738 9.8e-308 comE S Competence protein
GKDGPIGP_00739 2.4e-173 holA 2.7.7.7 L DNA polymerase III delta subunit
GKDGPIGP_00740 1.5e-87 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
GKDGPIGP_00741 1e-159 yeaZ 2.3.1.234 O Glycoprotease family
GKDGPIGP_00742 4.2e-104 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
GKDGPIGP_00743 2e-194 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GKDGPIGP_00745 3.6e-120 K helix_turn_helix, Lux Regulon
GKDGPIGP_00746 3.3e-239 T Histidine kinase
GKDGPIGP_00748 6.7e-60
GKDGPIGP_00749 8.9e-140
GKDGPIGP_00750 1.9e-142 S ABC-2 family transporter protein
GKDGPIGP_00751 2.8e-199 V AAA domain, putative AbiEii toxin, Type IV TA system
GKDGPIGP_00752 2.8e-52 L PFAM Relaxase mobilization nuclease family protein
GKDGPIGP_00753 1.1e-144 S Fic/DOC family
GKDGPIGP_00754 3.4e-20 2.7.11.1 S HipA-like C-terminal domain
GKDGPIGP_00755 5.4e-34 xerH L Phage integrase family
GKDGPIGP_00757 4.1e-110 M Peptidase family M23
GKDGPIGP_00758 4.8e-254 G ABC transporter substrate-binding protein
GKDGPIGP_00759 2.3e-242 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
GKDGPIGP_00760 1.5e-208 guaB 1.1.1.205 F IMP dehydrogenase family protein
GKDGPIGP_00761 3.3e-91
GKDGPIGP_00762 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
GKDGPIGP_00763 2.2e-87 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GKDGPIGP_00764 1.7e-143 rpsB J Belongs to the universal ribosomal protein uS2 family
GKDGPIGP_00765 3.1e-145 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GKDGPIGP_00766 2.8e-134 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
GKDGPIGP_00767 2.6e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
GKDGPIGP_00768 3.7e-174 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
GKDGPIGP_00769 2.7e-224 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
GKDGPIGP_00770 1.2e-76 3.5.1.124 S DJ-1/PfpI family
GKDGPIGP_00771 6.1e-140 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
GKDGPIGP_00772 1.2e-70 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
GKDGPIGP_00773 7.1e-297 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
GKDGPIGP_00774 4e-65 yijF S Domain of unknown function (DUF1287)
GKDGPIGP_00775 2e-170 3.6.4.12
GKDGPIGP_00776 1.3e-75
GKDGPIGP_00777 1e-62 yeaO K Protein of unknown function, DUF488
GKDGPIGP_00779 2.9e-269 mmuP E amino acid
GKDGPIGP_00780 3.1e-27 G Transporter major facilitator family protein
GKDGPIGP_00781 3.8e-50 S Bacterial toxin of type II toxin-antitoxin system, YafQ
GKDGPIGP_00782 3.2e-40 relB L RelB antitoxin
GKDGPIGP_00783 3.7e-185 V MacB-like periplasmic core domain
GKDGPIGP_00784 9.2e-124 lolD Q ATPases associated with a variety of cellular activities
GKDGPIGP_00785 1.7e-141 M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GKDGPIGP_00786 3e-95
GKDGPIGP_00787 5.3e-127 K helix_turn_helix, Lux Regulon
GKDGPIGP_00788 5.8e-203 2.7.13.3 T Histidine kinase
GKDGPIGP_00789 2e-35 2.7.13.3 T Histidine kinase
GKDGPIGP_00792 5.2e-121
GKDGPIGP_00793 1.5e-50
GKDGPIGP_00794 7.3e-100 S Acetyltransferase (GNAT) domain
GKDGPIGP_00795 1.6e-66 cefD 5.1.1.17 E Aminotransferase, class V
GKDGPIGP_00796 6.5e-190 V VanZ like family
GKDGPIGP_00797 4.2e-56 EGP Major facilitator Superfamily
GKDGPIGP_00798 6.3e-260 mmuP E amino acid
GKDGPIGP_00799 3.9e-156 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
GKDGPIGP_00800 1.6e-131 S SOS response associated peptidase (SRAP)
GKDGPIGP_00801 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
GKDGPIGP_00802 7e-161 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
GKDGPIGP_00803 3.1e-186 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GKDGPIGP_00804 9.4e-113 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
GKDGPIGP_00805 9.9e-42 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
GKDGPIGP_00806 8.7e-156 hisG 2.4.2.17 F ATP phosphoribosyltransferase
GKDGPIGP_00807 3.9e-105 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GKDGPIGP_00808 3.9e-168 S Bacterial protein of unknown function (DUF881)
GKDGPIGP_00809 3.9e-35 sbp S Protein of unknown function (DUF1290)
GKDGPIGP_00810 4.2e-139 S Bacterial protein of unknown function (DUF881)
GKDGPIGP_00811 6.7e-75 garA T Inner membrane component of T3SS, cytoplasmic domain
GKDGPIGP_00812 3.2e-110 K helix_turn_helix, mercury resistance
GKDGPIGP_00813 1.1e-63
GKDGPIGP_00814 6.9e-36
GKDGPIGP_00815 1.7e-139 pgp 3.1.3.18 S HAD-hyrolase-like
GKDGPIGP_00816 5.1e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
GKDGPIGP_00817 0.0 helY L DEAD DEAH box helicase
GKDGPIGP_00818 6.8e-53
GKDGPIGP_00819 0.0 pafB K WYL domain
GKDGPIGP_00820 1.1e-294 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
GKDGPIGP_00821 2.7e-165 supH S Sucrose-6F-phosphate phosphohydrolase
GKDGPIGP_00823 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
GKDGPIGP_00824 1.2e-143 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GKDGPIGP_00825 1.1e-119 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GKDGPIGP_00826 1.1e-31
GKDGPIGP_00827 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
GKDGPIGP_00828 1.4e-229
GKDGPIGP_00829 2.9e-165 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
GKDGPIGP_00830 6.9e-223 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
GKDGPIGP_00831 2.7e-100 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GKDGPIGP_00832 1.2e-52 yajC U Preprotein translocase subunit
GKDGPIGP_00833 9.4e-200 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
GKDGPIGP_00834 3.2e-107 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
GKDGPIGP_00835 2.7e-100 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
GKDGPIGP_00836 2e-111 yebC K transcriptional regulatory protein
GKDGPIGP_00837 7.7e-111 hit 2.7.7.53 FG HIT domain
GKDGPIGP_00838 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GKDGPIGP_00844 4e-134 S PAC2 family
GKDGPIGP_00845 1.8e-156 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
GKDGPIGP_00846 6.2e-156 G Fructosamine kinase
GKDGPIGP_00847 3.4e-211 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
GKDGPIGP_00848 1.2e-189 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
GKDGPIGP_00849 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
GKDGPIGP_00850 3.6e-202 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
GKDGPIGP_00851 1.4e-240 brnQ U Component of the transport system for branched-chain amino acids
GKDGPIGP_00852 5.8e-190
GKDGPIGP_00853 3.6e-301 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
GKDGPIGP_00854 2e-160 S Sucrose-6F-phosphate phosphohydrolase
GKDGPIGP_00855 4.5e-177 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
GKDGPIGP_00856 2.5e-34 secG U Preprotein translocase SecG subunit
GKDGPIGP_00857 9.3e-147 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GKDGPIGP_00858 5.8e-222 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
GKDGPIGP_00859 3.5e-169 whiA K May be required for sporulation
GKDGPIGP_00860 8.3e-179 rapZ S Displays ATPase and GTPase activities
GKDGPIGP_00861 5.6e-191 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
GKDGPIGP_00862 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
GKDGPIGP_00863 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
GKDGPIGP_00864 5e-234 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
GKDGPIGP_00865 1.7e-32 XK26_04485 P Cobalt transport protein
GKDGPIGP_00866 3.6e-50 XK26_04485 P Cobalt transport protein
GKDGPIGP_00867 8.3e-59 P ABC transporter
GKDGPIGP_00868 5.2e-56 P ABC transporter
GKDGPIGP_00869 1.4e-130 S Enoyl-(Acyl carrier protein) reductase
GKDGPIGP_00870 1.1e-300 ybiT S ABC transporter
GKDGPIGP_00871 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GKDGPIGP_00872 9.4e-123 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GKDGPIGP_00873 9.4e-172 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
GKDGPIGP_00874 3.6e-218 MA20_36090 S Psort location Cytoplasmic, score 8.87
GKDGPIGP_00875 3.4e-28
GKDGPIGP_00876 5e-125 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GKDGPIGP_00877 3.1e-181 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
GKDGPIGP_00878 6.9e-158 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
GKDGPIGP_00879 9.4e-175 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
GKDGPIGP_00880 7.4e-291 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
GKDGPIGP_00881 7e-74 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
GKDGPIGP_00882 8.3e-179 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
GKDGPIGP_00883 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
GKDGPIGP_00884 1.7e-187 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GKDGPIGP_00885 5.7e-163 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
GKDGPIGP_00886 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GKDGPIGP_00888 1.3e-99 sixA 3.6.1.55 T Phosphoglycerate mutase family
GKDGPIGP_00889 3.5e-202 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
GKDGPIGP_00890 3e-133 S Phospholipase/Carboxylesterase
GKDGPIGP_00892 4.9e-139 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
GKDGPIGP_00893 1.9e-146 S phosphoesterase or phosphohydrolase
GKDGPIGP_00894 2.5e-89 S Appr-1'-p processing enzyme
GKDGPIGP_00895 4.7e-179 I alpha/beta hydrolase fold
GKDGPIGP_00897 2.5e-129
GKDGPIGP_00898 1.7e-127 S Plasmid pRiA4b ORF-3-like protein
GKDGPIGP_00899 2e-31 rarD S EamA-like transporter family
GKDGPIGP_00901 7.8e-137 yfbU S YfbU domain
GKDGPIGP_00905 1.1e-133
GKDGPIGP_00906 4.8e-105 bcp 1.11.1.15 O Redoxin
GKDGPIGP_00907 6.9e-161 S Sucrose-6F-phosphate phosphohydrolase
GKDGPIGP_00908 8.4e-159 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
GKDGPIGP_00909 1.9e-244 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
GKDGPIGP_00910 8.6e-81
GKDGPIGP_00911 0.0 S Glycosyl hydrolases related to GH101 family, GH129
GKDGPIGP_00912 0.0 E ABC transporter, substrate-binding protein, family 5
GKDGPIGP_00913 5.2e-300 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
GKDGPIGP_00914 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
GKDGPIGP_00915 9e-64 K helix_turn _helix lactose operon repressor
GKDGPIGP_00916 1e-190 K helix_turn _helix lactose operon repressor
GKDGPIGP_00918 7.4e-255 hemN H Involved in the biosynthesis of porphyrin-containing compound
GKDGPIGP_00919 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
GKDGPIGP_00920 5.8e-34 rpsT J Binds directly to 16S ribosomal RNA
GKDGPIGP_00921 3.3e-138 S UPF0126 domain
GKDGPIGP_00922 2.9e-146 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
GKDGPIGP_00923 1.6e-226 ilvE 2.6.1.42 E Amino-transferase class IV
GKDGPIGP_00924 1.7e-103 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
GKDGPIGP_00925 9.3e-209 yhjX EGP Major facilitator Superfamily
GKDGPIGP_00926 1.5e-232 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
GKDGPIGP_00927 3.6e-43 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
GKDGPIGP_00928 3.1e-204 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
GKDGPIGP_00929 0.0 fadD 6.2.1.3 I AMP-binding enzyme
GKDGPIGP_00930 6.2e-247 corC S CBS domain
GKDGPIGP_00931 1.2e-100 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GKDGPIGP_00932 2.5e-217 phoH T PhoH-like protein
GKDGPIGP_00933 4.4e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
GKDGPIGP_00934 4.6e-141 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
GKDGPIGP_00936 9.6e-166 spoU 2.1.1.185 J SpoU rRNA Methylase family
GKDGPIGP_00937 6.2e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
GKDGPIGP_00938 3.2e-109 yitW S Iron-sulfur cluster assembly protein
GKDGPIGP_00939 8.1e-102 iscU C SUF system FeS assembly protein, NifU family
GKDGPIGP_00940 1.1e-239 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GKDGPIGP_00941 7e-144 sufC O FeS assembly ATPase SufC
GKDGPIGP_00942 2.5e-236 sufD O FeS assembly protein SufD
GKDGPIGP_00943 1.5e-291 sufB O FeS assembly protein SufB
GKDGPIGP_00944 0.0 S L,D-transpeptidase catalytic domain
GKDGPIGP_00945 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
GKDGPIGP_00946 3.5e-79 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
GKDGPIGP_00947 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
GKDGPIGP_00948 2.5e-217 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
GKDGPIGP_00949 5.3e-70 3.4.23.43 S Type IV leader peptidase family
GKDGPIGP_00950 5.4e-196 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GKDGPIGP_00951 2.7e-71 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GKDGPIGP_00952 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GKDGPIGP_00953 1.6e-35
GKDGPIGP_00954 2.4e-55 WQ51_05790 S Bacterial protein of unknown function (DUF948)
GKDGPIGP_00955 1.9e-129 pgm3 G Phosphoglycerate mutase family
GKDGPIGP_00956 1.2e-48 relB L RelB antitoxin
GKDGPIGP_00957 7.1e-67 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
GKDGPIGP_00958 1.2e-111 E Transglutaminase-like superfamily
GKDGPIGP_00959 6.4e-44 sdpI S SdpI/YhfL protein family
GKDGPIGP_00960 1.8e-89 3.5.4.5 F cytidine deaminase activity
GKDGPIGP_00961 4.6e-151 S Peptidase C26
GKDGPIGP_00962 1.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GKDGPIGP_00963 6.3e-160 lolD V ABC transporter
GKDGPIGP_00964 2.2e-216 V FtsX-like permease family
GKDGPIGP_00965 1.3e-61 S Domain of unknown function (DUF4418)
GKDGPIGP_00966 0.0 pcrA 3.6.4.12 L DNA helicase
GKDGPIGP_00967 2.4e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
GKDGPIGP_00968 8.3e-241 pbuX F Permease family
GKDGPIGP_00969 2.8e-31 yozG K Cro/C1-type HTH DNA-binding domain
GKDGPIGP_00970 1.1e-40 S Protein of unknown function (DUF2975)
GKDGPIGP_00971 7.6e-157 I Serine aminopeptidase, S33
GKDGPIGP_00972 8.9e-162 M pfam nlp p60
GKDGPIGP_00973 6e-106 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
GKDGPIGP_00974 5.3e-110 3.4.13.21 E Peptidase family S51
GKDGPIGP_00975 1.6e-195
GKDGPIGP_00976 2.1e-106
GKDGPIGP_00977 2.9e-21 E GDSL-like Lipase/Acylhydrolase family
GKDGPIGP_00978 7.6e-47 E GDSL-like Lipase/Acylhydrolase family
GKDGPIGP_00979 5.2e-90 K Helix-turn-helix domain
GKDGPIGP_00980 3.5e-103 S PIN domain
GKDGPIGP_00981 1.2e-282 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
GKDGPIGP_00982 1.3e-249 V ABC-2 family transporter protein
GKDGPIGP_00983 1.8e-226 V ABC-2 family transporter protein
GKDGPIGP_00984 1.8e-184 V ATPases associated with a variety of cellular activities
GKDGPIGP_00985 1e-120 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
GKDGPIGP_00986 9.3e-245 T Histidine kinase
GKDGPIGP_00987 8.3e-114 K helix_turn_helix, Lux Regulon
GKDGPIGP_00988 2.1e-114 MA20_27875 P Protein of unknown function DUF47
GKDGPIGP_00989 2.2e-188 pit P Phosphate transporter family
GKDGPIGP_00990 3.3e-255 nplT G Alpha amylase, catalytic domain
GKDGPIGP_00991 0.0 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
GKDGPIGP_00992 3.2e-234 rutG F Permease family
GKDGPIGP_00993 6.7e-161 3.1.3.73 G Phosphoglycerate mutase family
GKDGPIGP_00994 3e-107 3.1.3.27 E haloacid dehalogenase-like hydrolase
GKDGPIGP_00995 2e-234 EGP Major facilitator Superfamily
GKDGPIGP_00997 8.7e-51 2.7.1.2 GK ROK family
GKDGPIGP_00998 1.9e-147 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GKDGPIGP_00999 8.1e-243 nagA 3.5.1.25 G Amidohydrolase family
GKDGPIGP_01000 7.5e-286 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
GKDGPIGP_01001 1.2e-13 EGP Transmembrane secretion effector
GKDGPIGP_01002 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
GKDGPIGP_01003 2.2e-11
GKDGPIGP_01004 1.1e-119 K Bacterial regulatory proteins, tetR family
GKDGPIGP_01005 5.7e-220 G Transmembrane secretion effector
GKDGPIGP_01006 1.7e-33 K addiction module antidote protein HigA
GKDGPIGP_01007 3.3e-244 S HipA-like C-terminal domain
GKDGPIGP_01008 1.1e-37 L RelB antitoxin
GKDGPIGP_01009 2.9e-51 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
GKDGPIGP_01010 3.5e-66 S Cupin 2, conserved barrel domain protein
GKDGPIGP_01011 1.3e-159 ksgA 2.1.1.182 J Methyltransferase domain
GKDGPIGP_01012 1.1e-60 yccF S Inner membrane component domain
GKDGPIGP_01013 1.1e-234 XK27_00240 K Fic/DOC family
GKDGPIGP_01014 1.6e-14 2.7.7.7 L Transposase, Mutator family
GKDGPIGP_01015 0.0 drrC L ABC transporter
GKDGPIGP_01016 2.7e-247 V MatE
GKDGPIGP_01018 2.7e-28 S rRNA binding
GKDGPIGP_01019 1.4e-164 K Arac family
GKDGPIGP_01020 1.7e-203 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
GKDGPIGP_01021 6.7e-111 papP E Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01022 1.2e-118 E Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01023 5.8e-138 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
GKDGPIGP_01024 9.6e-155 cjaA ET Bacterial periplasmic substrate-binding proteins
GKDGPIGP_01025 1.4e-147 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GKDGPIGP_01026 4.1e-294 pip 3.4.11.5 S alpha/beta hydrolase fold
GKDGPIGP_01027 0.0 tcsS2 T Histidine kinase
GKDGPIGP_01028 1.3e-140 K helix_turn_helix, Lux Regulon
GKDGPIGP_01029 0.0 MV MacB-like periplasmic core domain
GKDGPIGP_01030 7.8e-166 V ABC transporter, ATP-binding protein
GKDGPIGP_01031 4.5e-252 metY 2.5.1.49 E Aminotransferase class-V
GKDGPIGP_01032 2.8e-165 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
GKDGPIGP_01033 1.8e-22 L Transposase and inactivated derivatives IS30 family
GKDGPIGP_01034 3.7e-75 yraN L Belongs to the UPF0102 family
GKDGPIGP_01035 6.8e-292 comM O Magnesium chelatase, subunit ChlI C-terminal
GKDGPIGP_01036 0.0 dprA 5.99.1.2 LU DNA recombination-mediator protein A
GKDGPIGP_01037 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
GKDGPIGP_01038 4.2e-183 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
GKDGPIGP_01039 1.9e-113 safC S O-methyltransferase
GKDGPIGP_01040 3.6e-168 fmt2 3.2.2.10 S Belongs to the LOG family
GKDGPIGP_01041 1.3e-238 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
GKDGPIGP_01042 3.3e-241 patB 4.4.1.8 E Aminotransferase, class I II
GKDGPIGP_01045 2.1e-252 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GKDGPIGP_01046 1.1e-121 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GKDGPIGP_01047 6.5e-116 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GKDGPIGP_01048 8.9e-60
GKDGPIGP_01049 1.7e-241 clcA_2 P Voltage gated chloride channel
GKDGPIGP_01050 1.3e-233 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
GKDGPIGP_01051 2.2e-251 rnd 3.1.13.5 J 3'-5' exonuclease
GKDGPIGP_01052 8.3e-119 S Protein of unknown function (DUF3000)
GKDGPIGP_01053 8.7e-175 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GKDGPIGP_01054 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
GKDGPIGP_01055 2.6e-38
GKDGPIGP_01056 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GKDGPIGP_01057 3.7e-226 S Peptidase dimerisation domain
GKDGPIGP_01058 7.4e-113 metI P Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01059 1.4e-220 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GKDGPIGP_01060 1.6e-177 metQ P NLPA lipoprotein
GKDGPIGP_01061 2.1e-157 S Sucrose-6F-phosphate phosphohydrolase
GKDGPIGP_01064 2.7e-134 3.1.3.85 G Phosphoglycerate mutase family
GKDGPIGP_01065 2.5e-65 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
GKDGPIGP_01066 1.3e-262 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GKDGPIGP_01067 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
GKDGPIGP_01068 1.3e-301 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
GKDGPIGP_01069 0.0 XK27_09800 I Psort location CytoplasmicMembrane, score 9.99
GKDGPIGP_01070 3.2e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GKDGPIGP_01072 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
GKDGPIGP_01073 1.7e-232 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GKDGPIGP_01074 1.5e-255 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
GKDGPIGP_01075 5.7e-214 ykiI
GKDGPIGP_01076 6.5e-122
GKDGPIGP_01078 5.6e-21 tag 3.2.2.20 L Methyladenine glycosylase
GKDGPIGP_01079 2.1e-125 S GyrI-like small molecule binding domain
GKDGPIGP_01080 1.1e-89 K Putative zinc ribbon domain
GKDGPIGP_01081 3.9e-12 zntR K bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
GKDGPIGP_01082 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
GKDGPIGP_01083 4e-127 3.6.1.13 L NUDIX domain
GKDGPIGP_01084 2.6e-177 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
GKDGPIGP_01085 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GKDGPIGP_01086 2.8e-124 pdtaR T Response regulator receiver domain protein
GKDGPIGP_01088 1.1e-109 aspA 3.6.1.13 L NUDIX domain
GKDGPIGP_01089 2.7e-274 pyk 2.7.1.40 G Pyruvate kinase
GKDGPIGP_01090 1e-176 terC P Integral membrane protein, TerC family
GKDGPIGP_01091 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
GKDGPIGP_01092 3e-114 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GKDGPIGP_01093 3.2e-254 rpsA J Ribosomal protein S1
GKDGPIGP_01094 1.5e-163 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GKDGPIGP_01095 8e-184 P Zinc-uptake complex component A periplasmic
GKDGPIGP_01096 3.8e-162 znuC P ATPases associated with a variety of cellular activities
GKDGPIGP_01097 4e-137 znuB U ABC 3 transport family
GKDGPIGP_01098 1.1e-87 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
GKDGPIGP_01099 2.1e-100 carD K CarD-like/TRCF domain
GKDGPIGP_01100 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
GKDGPIGP_01101 4.5e-129 T Response regulator receiver domain protein
GKDGPIGP_01102 4.4e-197 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GKDGPIGP_01103 2.2e-122 ctsW S Phosphoribosyl transferase domain
GKDGPIGP_01104 7.7e-146 cof 5.2.1.8 T Eukaryotic phosphomannomutase
GKDGPIGP_01105 6.3e-78 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
GKDGPIGP_01106 7.9e-264
GKDGPIGP_01107 0.0 S Glycosyl transferase, family 2
GKDGPIGP_01108 1.8e-55 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
GKDGPIGP_01109 1.3e-206 K Cell envelope-related transcriptional attenuator domain
GKDGPIGP_01110 0.0 D FtsK/SpoIIIE family
GKDGPIGP_01111 4.9e-47 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
GKDGPIGP_01112 2.2e-279 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GKDGPIGP_01113 1.2e-145 yplQ S Haemolysin-III related
GKDGPIGP_01114 4.4e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GKDGPIGP_01115 4e-74 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
GKDGPIGP_01116 1e-281 sdaA 4.3.1.17 E Serine dehydratase alpha chain
GKDGPIGP_01117 2.9e-94
GKDGPIGP_01119 2.9e-182 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
GKDGPIGP_01120 1.3e-102 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
GKDGPIGP_01121 6.6e-70 divIC D Septum formation initiator
GKDGPIGP_01122 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GKDGPIGP_01123 2.6e-174 1.1.1.65 C Aldo/keto reductase family
GKDGPIGP_01124 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GKDGPIGP_01125 7.6e-114 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
GKDGPIGP_01126 4.1e-93 2.3.1.183 M Acetyltransferase (GNAT) domain
GKDGPIGP_01127 0.0 S Uncharacterised protein family (UPF0182)
GKDGPIGP_01128 6.6e-139 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
GKDGPIGP_01129 3.2e-138 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GKDGPIGP_01130 2.7e-97
GKDGPIGP_01131 2e-236 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
GKDGPIGP_01132 3.1e-281 thrC 4.2.3.1 E Threonine synthase N terminus
GKDGPIGP_01133 1.2e-40 S Psort location Cytoplasmic, score
GKDGPIGP_01134 4.8e-107
GKDGPIGP_01135 3.8e-120 S ABC-2 family transporter protein
GKDGPIGP_01136 4.2e-172 V ATPases associated with a variety of cellular activities
GKDGPIGP_01137 1.6e-56 K helix_turn_helix gluconate operon transcriptional repressor
GKDGPIGP_01138 1.8e-55 J Acetyltransferase (GNAT) domain
GKDGPIGP_01139 4.5e-120 S Haloacid dehalogenase-like hydrolase
GKDGPIGP_01140 0.0 recN L May be involved in recombinational repair of damaged DNA
GKDGPIGP_01141 7.4e-183 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GKDGPIGP_01142 8.3e-12 trkB P Cation transport protein
GKDGPIGP_01143 4e-69 trkA P TrkA-N domain
GKDGPIGP_01144 4.7e-96
GKDGPIGP_01145 1.4e-139 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
GKDGPIGP_01147 1e-198 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
GKDGPIGP_01148 4.8e-159 L Tetratricopeptide repeat
GKDGPIGP_01149 2.6e-255 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GKDGPIGP_01150 9.1e-82 S Protein of unknown function (DUF975)
GKDGPIGP_01151 3.9e-139 S Putative ABC-transporter type IV
GKDGPIGP_01152 4.6e-102 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
GKDGPIGP_01153 6.8e-71 M1-798 P Rhodanese Homology Domain
GKDGPIGP_01154 4.6e-146 moeB 2.7.7.80 H ThiF family
GKDGPIGP_01155 1.8e-156 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
GKDGPIGP_01156 7.9e-28 thiS 2.8.1.10 H ThiS family
GKDGPIGP_01157 3e-281 argH 4.3.2.1 E argininosuccinate lyase
GKDGPIGP_01158 2.4e-32 relB L RelB antitoxin
GKDGPIGP_01159 8.5e-44 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
GKDGPIGP_01160 2.1e-52 L PFAM Integrase catalytic
GKDGPIGP_01161 2.8e-295 L PFAM Integrase catalytic
GKDGPIGP_01162 3.6e-148 L IstB-like ATP binding protein
GKDGPIGP_01163 2.9e-31 L PFAM Integrase catalytic
GKDGPIGP_01164 1.2e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
GKDGPIGP_01165 4.9e-83 argR K Regulates arginine biosynthesis genes
GKDGPIGP_01166 3.9e-184 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GKDGPIGP_01167 1.3e-248 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
GKDGPIGP_01168 2.2e-179 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
GKDGPIGP_01169 2.4e-212 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
GKDGPIGP_01170 7.2e-203 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
GKDGPIGP_01171 1.2e-88
GKDGPIGP_01172 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
GKDGPIGP_01173 7.7e-202 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GKDGPIGP_01174 6e-160 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GKDGPIGP_01175 2.5e-164 cbiQ P Cobalt transport protein
GKDGPIGP_01176 1.8e-273 ykoD P ATPases associated with a variety of cellular activities
GKDGPIGP_01177 1.8e-107 ykoE S ABC-type cobalt transport system, permease component
GKDGPIGP_01178 2.1e-260 argE E Peptidase dimerisation domain
GKDGPIGP_01179 6.9e-102 S Protein of unknown function (DUF3043)
GKDGPIGP_01180 6e-277 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GKDGPIGP_01181 9.2e-144 S Domain of unknown function (DUF4191)
GKDGPIGP_01182 2.3e-281 glnA 6.3.1.2 E glutamine synthetase
GKDGPIGP_01183 2.3e-204 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
GKDGPIGP_01184 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GKDGPIGP_01185 0.0 S Tetratricopeptide repeat
GKDGPIGP_01186 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
GKDGPIGP_01188 3e-142 bioM P ATPases associated with a variety of cellular activities
GKDGPIGP_01189 8.2e-224 E Aminotransferase class I and II
GKDGPIGP_01190 5.8e-189 P NMT1/THI5 like
GKDGPIGP_01191 4.5e-135 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01192 3.1e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GKDGPIGP_01193 4.5e-129 recO L Involved in DNA repair and RecF pathway recombination
GKDGPIGP_01194 0.0 I acetylesterase activity
GKDGPIGP_01195 5.3e-231 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
GKDGPIGP_01196 6.4e-221 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
GKDGPIGP_01197 8.8e-210 2.7.11.1 NU Tfp pilus assembly protein FimV
GKDGPIGP_01199 1.6e-73 S Protein of unknown function (DUF3052)
GKDGPIGP_01200 1.5e-156 lon T Belongs to the peptidase S16 family
GKDGPIGP_01201 2.1e-297 S Zincin-like metallopeptidase
GKDGPIGP_01202 8.9e-292 uvrD2 3.6.4.12 L DNA helicase
GKDGPIGP_01203 5.5e-300 mphA S Aminoglycoside phosphotransferase
GKDGPIGP_01204 4.7e-32 S Protein of unknown function (DUF3107)
GKDGPIGP_01205 5.5e-169 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
GKDGPIGP_01206 4.2e-127 S Vitamin K epoxide reductase
GKDGPIGP_01207 7.8e-171 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
GKDGPIGP_01208 4.3e-149 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
GKDGPIGP_01209 2.9e-159 S Patatin-like phospholipase
GKDGPIGP_01210 1.4e-15 S Domain of unknown function (DUF4143)
GKDGPIGP_01211 1.5e-25 S Domain of unknown function (DUF4143)
GKDGPIGP_01212 7.2e-116 XK27_08050 O prohibitin homologues
GKDGPIGP_01213 2.7e-08 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
GKDGPIGP_01214 4.6e-176 S Domain of unknown function (DUF4143)
GKDGPIGP_01215 1.2e-41 XAC3035 O Glutaredoxin
GKDGPIGP_01216 4e-234 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
GKDGPIGP_01217 4.3e-126 ypfH S Phospholipase/Carboxylesterase
GKDGPIGP_01218 0.0 tetP J Elongation factor G, domain IV
GKDGPIGP_01219 2.7e-08
GKDGPIGP_01220 3.7e-136 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
GKDGPIGP_01221 1.4e-104 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
GKDGPIGP_01222 6.7e-170 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
GKDGPIGP_01223 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
GKDGPIGP_01224 2e-241 carA 6.3.5.5 F Belongs to the CarA family
GKDGPIGP_01225 1.1e-92 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GKDGPIGP_01226 3.9e-104 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GKDGPIGP_01227 1.1e-127 ybbL V ATPases associated with a variety of cellular activities
GKDGPIGP_01228 7.1e-136 ybbM V Uncharacterised protein family (UPF0014)
GKDGPIGP_01229 0.0 T Diguanylate cyclase, GGDEF domain
GKDGPIGP_01230 1.2e-21 T Diguanylate cyclase, GGDEF domain
GKDGPIGP_01231 3.8e-251 3.2.1.14 GH18 S Carbohydrate binding domain
GKDGPIGP_01232 0.0 M probably involved in cell wall
GKDGPIGP_01234 7.4e-48 4.1.1.44 L Cupin 2, conserved barrel domain protein
GKDGPIGP_01235 2.3e-185 S Membrane transport protein
GKDGPIGP_01236 6.4e-41 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
GKDGPIGP_01237 5.7e-110 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
GKDGPIGP_01239 3.2e-124 magIII L endonuclease III
GKDGPIGP_01240 1.1e-242 vbsD V MatE
GKDGPIGP_01241 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
GKDGPIGP_01242 3.8e-138 K LysR substrate binding domain
GKDGPIGP_01243 3.8e-220 EGP Major Facilitator Superfamily
GKDGPIGP_01244 8e-155 K LysR substrate binding domain
GKDGPIGP_01245 1.1e-218 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
GKDGPIGP_01247 1.6e-143 K helix_turn _helix lactose operon repressor
GKDGPIGP_01248 0.0 3.2.1.25 G beta-mannosidase
GKDGPIGP_01249 3.8e-140 dppF E ABC transporter
GKDGPIGP_01250 5e-141 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
GKDGPIGP_01251 1.2e-154 EP Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01252 7.5e-175 EP Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01253 2.1e-302 E Bacterial extracellular solute-binding proteins, family 5 Middle
GKDGPIGP_01254 6.2e-236 bglA 3.2.1.21 G Glycosyl hydrolase family 1
GKDGPIGP_01255 1.6e-146 E GDSL-like Lipase/Acylhydrolase family
GKDGPIGP_01256 3.2e-174 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
GKDGPIGP_01257 7.9e-77 KT Transcriptional regulatory protein, C terminal
GKDGPIGP_01258 7.9e-35
GKDGPIGP_01259 9.5e-253 S Domain of unknown function (DUF4143)
GKDGPIGP_01260 2.1e-196 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
GKDGPIGP_01261 3e-16 K MerR family regulatory protein
GKDGPIGP_01262 5.3e-18 K MerR family regulatory protein
GKDGPIGP_01263 5.8e-89 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GKDGPIGP_01264 1.2e-58 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GKDGPIGP_01265 2.7e-32 S Psort location CytoplasmicMembrane, score
GKDGPIGP_01266 1.1e-184 MA20_14895 S Conserved hypothetical protein 698
GKDGPIGP_01267 2.3e-145 rlrG K Bacterial regulatory helix-turn-helix protein, lysR family
GKDGPIGP_01268 3.5e-129 tmp1 S Domain of unknown function (DUF4391)
GKDGPIGP_01269 6.2e-232 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GKDGPIGP_01270 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GKDGPIGP_01271 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
GKDGPIGP_01272 2.1e-61 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GKDGPIGP_01273 1.1e-192 yocS S SBF-like CPA transporter family (DUF4137)
GKDGPIGP_01275 2.1e-196 ltaE 4.1.2.48 E Beta-eliminating lyase
GKDGPIGP_01276 2.6e-219 M Glycosyl transferase 4-like domain
GKDGPIGP_01277 3.9e-229 mtnE 2.6.1.83 E Aminotransferase class I and II
GKDGPIGP_01278 6.7e-224 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
GKDGPIGP_01279 9.5e-138 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
GKDGPIGP_01280 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
GKDGPIGP_01281 4.8e-222 I alpha/beta hydrolase fold
GKDGPIGP_01282 5e-254 Q D-alanine [D-alanyl carrier protein] ligase activity
GKDGPIGP_01283 1.5e-110 Q D-alanine [D-alanyl carrier protein] ligase activity
GKDGPIGP_01284 1.9e-144
GKDGPIGP_01285 1.5e-29 S Protein of unknown function (DUF4230)
GKDGPIGP_01288 2.4e-08 S Protein of unknown function (DUF4230)
GKDGPIGP_01289 1.1e-102 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
GKDGPIGP_01290 3.7e-12 C Aldo/keto reductase family
GKDGPIGP_01291 5.4e-33
GKDGPIGP_01292 1.1e-297 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
GKDGPIGP_01293 2.7e-293 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
GKDGPIGP_01294 9.2e-184 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
GKDGPIGP_01295 3.7e-243 purD 6.3.4.13 F Belongs to the GARS family
GKDGPIGP_01296 4.5e-299 aldH 1.2.1.3, 1.2.1.5 C Aldehyde dehydrogenase family
GKDGPIGP_01297 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
GKDGPIGP_01298 7.3e-156 P Zinc-uptake complex component A periplasmic
GKDGPIGP_01299 1.5e-98 S cobalamin synthesis protein
GKDGPIGP_01300 3.9e-29 rpmB J Ribosomal L28 family
GKDGPIGP_01301 1.4e-20 rpmG J Ribosomal protein L33
GKDGPIGP_01302 2.5e-44 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GKDGPIGP_01303 4.4e-34 rpmE2 J Ribosomal protein L31
GKDGPIGP_01304 1.1e-14 rpmJ J Ribosomal protein L36
GKDGPIGP_01305 1.3e-18 J Ribosomal L32p protein family
GKDGPIGP_01306 2.3e-25 adcA P ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
GKDGPIGP_01307 1.4e-180 ycgR S Predicted permease
GKDGPIGP_01308 3.9e-139 S TIGRFAM TIGR03943 family protein
GKDGPIGP_01309 2.4e-84 zur P Ferric uptake regulator family
GKDGPIGP_01310 7.1e-64
GKDGPIGP_01311 2.8e-71 XK27_06785 V ABC transporter
GKDGPIGP_01312 1.4e-26 ylbB V FtsX-like permease family
GKDGPIGP_01313 9.7e-84 ylbB V FtsX-like permease family
GKDGPIGP_01314 3.5e-68 zur P Belongs to the Fur family
GKDGPIGP_01315 4.2e-225 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GKDGPIGP_01316 1.4e-84 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
GKDGPIGP_01317 5.4e-181 adh3 C Zinc-binding dehydrogenase
GKDGPIGP_01318 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GKDGPIGP_01319 4.7e-277 macB_8 V MacB-like periplasmic core domain
GKDGPIGP_01320 1.8e-176 M Conserved repeat domain
GKDGPIGP_01321 5.3e-134 V ATPases associated with a variety of cellular activities
GKDGPIGP_01322 2.1e-85 msrA 1.8.4.11, 1.8.4.12 O peptide-methionine (S)-S-oxide reductase activity
GKDGPIGP_01323 0.0 E ABC transporter, substrate-binding protein, family 5
GKDGPIGP_01324 4.5e-13 L Psort location Cytoplasmic, score 8.87
GKDGPIGP_01325 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
GKDGPIGP_01326 4.9e-224 K helix_turn _helix lactose operon repressor
GKDGPIGP_01327 3.6e-257 G Bacterial extracellular solute-binding protein
GKDGPIGP_01330 3e-159 K Helix-turn-helix domain, rpiR family
GKDGPIGP_01331 7e-43 G Alpha-L-arabinofuranosidase C-terminal domain
GKDGPIGP_01332 3.3e-30
GKDGPIGP_01333 4.2e-209 ybiR P Citrate transporter
GKDGPIGP_01334 2.6e-296 EK Alanine-glyoxylate amino-transferase
GKDGPIGP_01335 5.6e-115 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
GKDGPIGP_01336 3.1e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
GKDGPIGP_01337 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
GKDGPIGP_01338 3.1e-245 dgt 3.1.5.1 F Phosphohydrolase-associated domain
GKDGPIGP_01339 1.5e-263 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GKDGPIGP_01340 4.3e-272 yhdG E aromatic amino acid transport protein AroP K03293
GKDGPIGP_01341 6.5e-104 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GKDGPIGP_01342 2.7e-93 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
GKDGPIGP_01343 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
GKDGPIGP_01344 1.1e-220 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
GKDGPIGP_01345 3.7e-193 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
GKDGPIGP_01346 3.8e-137 sapF E ATPases associated with a variety of cellular activities
GKDGPIGP_01347 2.7e-135 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
GKDGPIGP_01348 5.9e-148 EP Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01349 2.8e-166 P Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01350 4e-290 E ABC transporter, substrate-binding protein, family 5
GKDGPIGP_01351 9.1e-144 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
GKDGPIGP_01352 3e-278 G Bacterial extracellular solute-binding protein
GKDGPIGP_01353 1.7e-259 G Bacterial extracellular solute-binding protein
GKDGPIGP_01354 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GKDGPIGP_01355 4.4e-167 G ABC transporter permease
GKDGPIGP_01356 5.9e-166 malC G Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01357 1.5e-186 K Periplasmic binding protein domain
GKDGPIGP_01358 4.7e-142 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
GKDGPIGP_01359 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
GKDGPIGP_01360 9.1e-150 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
GKDGPIGP_01361 3.6e-153 yecS E Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01362 8.4e-168 pknD ET ABC transporter, substrate-binding protein, family 3
GKDGPIGP_01363 7.3e-143 pknD ET ABC transporter, substrate-binding protein, family 3
GKDGPIGP_01364 6.3e-79 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
GKDGPIGP_01365 4e-147 usp 3.5.1.28 CBM50 D CHAP domain protein
GKDGPIGP_01366 9.8e-161 ftsX D Part of the ABC transporter FtsEX involved in cellular division
GKDGPIGP_01367 1.3e-205 ftsE D Cell division ATP-binding protein FtsE
GKDGPIGP_01368 1.6e-205 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
GKDGPIGP_01369 3.2e-267 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
GKDGPIGP_01370 7.5e-123 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GKDGPIGP_01371 1.2e-258 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GKDGPIGP_01372 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
GKDGPIGP_01373 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GKDGPIGP_01374 3.8e-162 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GKDGPIGP_01375 6.4e-134 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
GKDGPIGP_01376 1.7e-235 G Major Facilitator Superfamily
GKDGPIGP_01377 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
GKDGPIGP_01378 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
GKDGPIGP_01379 1.8e-220 KLT Protein tyrosine kinase
GKDGPIGP_01380 0.0 S Fibronectin type 3 domain
GKDGPIGP_01381 2.5e-239 S Protein of unknown function DUF58
GKDGPIGP_01382 0.0 E Transglutaminase-like superfamily
GKDGPIGP_01383 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GKDGPIGP_01384 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GKDGPIGP_01385 5.5e-101
GKDGPIGP_01386 2.4e-186 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
GKDGPIGP_01387 7.6e-115 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
GKDGPIGP_01388 1.6e-252 S UPF0210 protein
GKDGPIGP_01389 6.4e-44 gcvR T Belongs to the UPF0237 family
GKDGPIGP_01390 5.3e-234 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
GKDGPIGP_01391 6.6e-253 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
GKDGPIGP_01392 2.8e-123 glpR K DeoR C terminal sensor domain
GKDGPIGP_01393 1.8e-228 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
GKDGPIGP_01394 1.1e-226 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
GKDGPIGP_01395 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
GKDGPIGP_01396 2.1e-134 glxR K helix_turn_helix, cAMP Regulatory protein
GKDGPIGP_01397 5.7e-217 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
GKDGPIGP_01398 5.4e-192 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
GKDGPIGP_01399 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
GKDGPIGP_01400 2.5e-225 S Uncharacterized conserved protein (DUF2183)
GKDGPIGP_01401 5.9e-70 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
GKDGPIGP_01402 2.2e-211 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
GKDGPIGP_01403 6.4e-159 mhpC I Alpha/beta hydrolase family
GKDGPIGP_01404 1.6e-120 F Domain of unknown function (DUF4916)
GKDGPIGP_01405 1.9e-59 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
GKDGPIGP_01406 2.9e-171 S G5
GKDGPIGP_01407 8e-151
GKDGPIGP_01408 1.9e-235 wcoI DM Psort location CytoplasmicMembrane, score
GKDGPIGP_01409 3.2e-69
GKDGPIGP_01411 1.9e-261 S Psort location CytoplasmicMembrane, score 9.99
GKDGPIGP_01412 7.1e-103 K Transposase IS116 IS110 IS902
GKDGPIGP_01413 8.2e-24 S AAA ATPase domain
GKDGPIGP_01414 1.6e-10 L Psort location Cytoplasmic, score
GKDGPIGP_01415 1.7e-267 L PFAM Integrase catalytic
GKDGPIGP_01416 1.1e-100 L HTH-like domain
GKDGPIGP_01417 7.1e-228 xerC_1 L Belongs to the 'phage' integrase family
GKDGPIGP_01418 5.9e-193 L Phage integrase family
GKDGPIGP_01419 3.2e-200 L Phage integrase, N-terminal SAM-like domain
GKDGPIGP_01420 2.8e-295 L PFAM Integrase catalytic
GKDGPIGP_01421 3.6e-148 L IstB-like ATP binding protein
GKDGPIGP_01424 1.8e-36 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
GKDGPIGP_01425 1.3e-198 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
GKDGPIGP_01426 1.6e-131 cas4 3.1.12.1 L Domain of unknown function DUF83
GKDGPIGP_01427 8.7e-156 csd2 L CRISPR-associated protein Cas7
GKDGPIGP_01428 0.0 csd1 3.5.1.28 M CRISPR-associated protein (Cas_Csd1)
GKDGPIGP_01429 3.8e-104 cas5d S CRISPR-associated protein (Cas_Cas5)
GKDGPIGP_01430 4e-09 cas5d S CRISPR-associated protein (Cas_Cas5)
GKDGPIGP_01431 0.0 cas3 L DEAD-like helicases superfamily
GKDGPIGP_01433 1.7e-44 L Transposase
GKDGPIGP_01434 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GKDGPIGP_01435 3.1e-168 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GKDGPIGP_01436 1.9e-68 rbsD 5.4.99.62 G RbsD / FucU transport protein family
GKDGPIGP_01437 1.8e-162 rbsB G Periplasmic binding protein domain
GKDGPIGP_01438 1.1e-157 rbsC U Branched-chain amino acid transport system / permease component
GKDGPIGP_01439 1.6e-277 rbsA 3.6.3.17 G ATPases associated with a variety of cellular activities
GKDGPIGP_01440 2.6e-186 rbsR K helix_turn _helix lactose operon repressor
GKDGPIGP_01441 1.3e-39 L Transposase
GKDGPIGP_01442 7.6e-261 EGP Major Facilitator Superfamily
GKDGPIGP_01443 9.2e-164 rbsK 2.7.1.15 G Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GKDGPIGP_01444 1.4e-228 bdhA C Iron-containing alcohol dehydrogenase
GKDGPIGP_01445 2.1e-131 3.1.3.18 S Haloacid dehalogenase-like hydrolase
GKDGPIGP_01446 1.4e-189 rihB 3.2.2.1, 3.2.2.8 F Inosine-uridine preferring nucleoside hydrolase
GKDGPIGP_01447 9.7e-180 ydjH 2.7.1.15 G pfkB family carbohydrate kinase
GKDGPIGP_01448 1.4e-118 trpF 5.3.1.24 E N-(5'phosphoribosyl)anthranilate (PRA) isomerase
GKDGPIGP_01449 2.1e-154 P ATPases associated with a variety of cellular activities
GKDGPIGP_01450 5.7e-152 P ATPases associated with a variety of cellular activities
GKDGPIGP_01451 6.4e-140 cbiQ P Cobalt transport protein
GKDGPIGP_01452 1.8e-100 2.7.7.65 T ECF transporter, substrate-specific component
GKDGPIGP_01453 0.0 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GKDGPIGP_01454 0.0 V ABC transporter transmembrane region
GKDGPIGP_01455 0.0 V ABC transporter, ATP-binding protein
GKDGPIGP_01456 1.2e-89 K MarR family
GKDGPIGP_01457 0.0 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
GKDGPIGP_01458 2.5e-85 K Bacterial regulatory proteins, tetR family
GKDGPIGP_01459 3.8e-104 I Hydrolase, alpha beta domain protein
GKDGPIGP_01460 2e-249 S X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
GKDGPIGP_01461 4.4e-164 G Major Facilitator Superfamily
GKDGPIGP_01462 1.3e-73 K Bacterial regulatory proteins, tetR family
GKDGPIGP_01463 4.4e-40
GKDGPIGP_01464 5.4e-236 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
GKDGPIGP_01465 1.3e-69 S Nucleotidyltransferase substrate binding protein like
GKDGPIGP_01466 6.1e-45 S Nucleotidyltransferase domain
GKDGPIGP_01468 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
GKDGPIGP_01469 2.3e-141 K Bacterial regulatory proteins, tetR family
GKDGPIGP_01470 1.2e-254 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
GKDGPIGP_01471 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
GKDGPIGP_01472 5e-136 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GKDGPIGP_01473 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
GKDGPIGP_01474 3.1e-256 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GKDGPIGP_01475 2.4e-41 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GKDGPIGP_01476 5.1e-91 ywrO 1.6.5.2 S Flavodoxin-like fold
GKDGPIGP_01477 0.0 fadD 6.2.1.3 I AMP-binding enzyme
GKDGPIGP_01478 9.4e-65 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GKDGPIGP_01479 1.4e-77 F Nucleoside 2-deoxyribosyltransferase
GKDGPIGP_01481 1.6e-200 S Endonuclease/Exonuclease/phosphatase family
GKDGPIGP_01482 3.4e-180 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
GKDGPIGP_01483 6e-235 aspB E Aminotransferase class-V
GKDGPIGP_01484 5.9e-202 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
GKDGPIGP_01485 5.1e-89 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
GKDGPIGP_01486 4.1e-101 XK27_03610 K Acetyltransferase (GNAT) domain
GKDGPIGP_01487 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
GKDGPIGP_01488 1.5e-146 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
GKDGPIGP_01489 2.4e-250 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
GKDGPIGP_01490 6e-151 map 3.4.11.18 E Methionine aminopeptidase
GKDGPIGP_01491 1.5e-142 S Short repeat of unknown function (DUF308)
GKDGPIGP_01492 0.0 pepO 3.4.24.71 O Peptidase family M13
GKDGPIGP_01493 2.9e-114 L Single-strand binding protein family
GKDGPIGP_01494 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
GKDGPIGP_01495 1.6e-100 pflA 1.97.1.4 O Radical SAM superfamily
GKDGPIGP_01496 1.2e-35 pflA 1.97.1.4 O Radical SAM superfamily
GKDGPIGP_01497 1.3e-268 recD2 3.6.4.12 L PIF1-like helicase
GKDGPIGP_01498 4.8e-122 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
GKDGPIGP_01499 7.2e-275 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
GKDGPIGP_01500 1.9e-212 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
GKDGPIGP_01501 1.5e-118 ywlC 2.7.7.87 J Belongs to the SUA5 family
GKDGPIGP_01502 6.6e-125 livF E ATPases associated with a variety of cellular activities
GKDGPIGP_01503 1.4e-161 E Branched-chain amino acid ATP-binding cassette transporter
GKDGPIGP_01504 1.4e-187 livM U Belongs to the binding-protein-dependent transport system permease family
GKDGPIGP_01505 3.6e-107 U Belongs to the binding-protein-dependent transport system permease family
GKDGPIGP_01506 7.5e-206 livK E Receptor family ligand binding region
GKDGPIGP_01507 3.1e-164 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
GKDGPIGP_01508 3.7e-191 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GKDGPIGP_01509 1.3e-36 rpmE J Binds the 23S rRNA
GKDGPIGP_01511 1.3e-100 yebQ EGP Major facilitator Superfamily
GKDGPIGP_01512 7.1e-152
GKDGPIGP_01513 3.5e-73 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
GKDGPIGP_01514 1.9e-166 dkgB S Oxidoreductase, aldo keto reductase family protein
GKDGPIGP_01515 1.5e-18 lmrB U Major Facilitator Superfamily
GKDGPIGP_01516 4.8e-88 K Winged helix DNA-binding domain
GKDGPIGP_01517 3.8e-176 glkA 2.7.1.2 G ROK family
GKDGPIGP_01519 2.9e-307 EGP Major Facilitator Superfamily
GKDGPIGP_01520 0.0 yjjK S ATP-binding cassette protein, ChvD family
GKDGPIGP_01521 2.5e-169 tesB I Thioesterase-like superfamily
GKDGPIGP_01522 3.5e-86 S Protein of unknown function (DUF3180)
GKDGPIGP_01523 6.5e-226 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
GKDGPIGP_01524 1.4e-161 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
GKDGPIGP_01525 2.8e-117 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
GKDGPIGP_01526 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GKDGPIGP_01527 2.7e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
GKDGPIGP_01528 1.5e-211 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
GKDGPIGP_01529 1.8e-252 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
GKDGPIGP_01530 7.6e-297
GKDGPIGP_01531 2.4e-190 natA V ATPases associated with a variety of cellular activities
GKDGPIGP_01532 4.7e-235 epsG M Glycosyl transferase family 21
GKDGPIGP_01533 5.6e-281 S AI-2E family transporter
GKDGPIGP_01534 5.2e-178 3.4.14.13 M Glycosyltransferase like family 2
GKDGPIGP_01535 5.2e-204 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
GKDGPIGP_01536 1.4e-261 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
GKDGPIGP_01539 4.5e-161 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
GKDGPIGP_01542 5.6e-10 S Helix-turn-helix domain
GKDGPIGP_01543 1.5e-204 S Helix-turn-helix domain
GKDGPIGP_01544 1.3e-78 S Transcription factor WhiB
GKDGPIGP_01545 1.3e-100 parA D AAA domain
GKDGPIGP_01546 2.6e-39
GKDGPIGP_01547 1.2e-280 S ATPases associated with a variety of cellular activities
GKDGPIGP_01548 2.2e-93 K FR47-like protein
GKDGPIGP_01549 1.3e-119 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
GKDGPIGP_01550 0.0 XK27_00515 D Cell surface antigen C-terminus
GKDGPIGP_01551 2.4e-44 S Helix-turn-helix domain
GKDGPIGP_01552 1.8e-61 S PIN domain
GKDGPIGP_01553 6.2e-31
GKDGPIGP_01554 1.1e-145
GKDGPIGP_01555 1.7e-42 S PrgI family protein
GKDGPIGP_01556 0.0 trsE U type IV secretory pathway VirB4
GKDGPIGP_01557 1.5e-209 isp2 3.2.1.96 M CHAP domain
GKDGPIGP_01558 2e-167
GKDGPIGP_01559 1.5e-46
GKDGPIGP_01560 5.1e-147 L Psort location Cytoplasmic, score
GKDGPIGP_01561 6e-73 U Type IV secretory system Conjugative DNA transfer
GKDGPIGP_01562 2e-47 U Type IV secretory system Conjugative DNA transfer
GKDGPIGP_01564 4.1e-50
GKDGPIGP_01565 5.7e-219 ard S Antirestriction protein (ArdA)
GKDGPIGP_01566 1.2e-49
GKDGPIGP_01567 5.6e-43
GKDGPIGP_01568 4.4e-95 S Protein of unknown function (DUF3801)
GKDGPIGP_01569 7e-32 S Protein of unknown function (DUF3801)
GKDGPIGP_01570 1.9e-259 rlx U Relaxase/Mobilisation nuclease domain
GKDGPIGP_01571 1.6e-67 S Bacterial mobilisation protein (MobC)
GKDGPIGP_01572 3.3e-59
GKDGPIGP_01573 4.7e-41
GKDGPIGP_01574 4.9e-237 K ParB-like nuclease domain
GKDGPIGP_01575 1.8e-107 S Domain of unknown function (DUF4192)
GKDGPIGP_01576 9.8e-14 L Phage integrase family
GKDGPIGP_01577 2.3e-181 L Phage integrase family
GKDGPIGP_01579 9.4e-16 L Phage integrase family
GKDGPIGP_01580 5.2e-13 sprF 4.6.1.1 M Cell surface antigen C-terminus
GKDGPIGP_01581 1.9e-267 lacS G Psort location CytoplasmicMembrane, score 10.00
GKDGPIGP_01582 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GKDGPIGP_01583 1.8e-184 lacR K Transcriptional regulator, LacI family
GKDGPIGP_01584 6.3e-22 L Helix-turn-helix domain
GKDGPIGP_01585 1.4e-248 G Bacterial extracellular solute-binding protein
GKDGPIGP_01586 2e-214 GK ROK family
GKDGPIGP_01588 0.0 G Glycosyl hydrolase family 20, domain 2
GKDGPIGP_01589 6.7e-08 L HTH-like domain
GKDGPIGP_01590 1.5e-218 vex3 V ABC transporter permease
GKDGPIGP_01591 4.7e-211 vex1 V Efflux ABC transporter, permease protein
GKDGPIGP_01592 4.1e-110 vex2 V ABC transporter, ATP-binding protein
GKDGPIGP_01593 7.7e-97 ptpA 3.1.3.48 T low molecular weight
GKDGPIGP_01594 6.6e-127 folA 1.5.1.3 H dihydrofolate reductase
GKDGPIGP_01595 1e-167 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GKDGPIGP_01596 3.4e-73 attW O OsmC-like protein
GKDGPIGP_01597 1.5e-189 T Universal stress protein family
GKDGPIGP_01598 3.1e-101 M NlpC/P60 family
GKDGPIGP_01599 2.9e-99 M NlpC/P60 family
GKDGPIGP_01600 1.7e-168 usp 3.5.1.28 CBM50 S CHAP domain
GKDGPIGP_01601 5.1e-212 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
GKDGPIGP_01602 3.1e-32
GKDGPIGP_01603 3.5e-174 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GKDGPIGP_01604 1.6e-115 phoU P Plays a role in the regulation of phosphate uptake
GKDGPIGP_01605 1.1e-138 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GKDGPIGP_01606 2.8e-174 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
GKDGPIGP_01607 4.7e-311 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
GKDGPIGP_01609 1.3e-218 araJ EGP Major facilitator Superfamily
GKDGPIGP_01610 0.0 S Domain of unknown function (DUF4037)
GKDGPIGP_01611 2.9e-116 S Protein of unknown function (DUF4125)
GKDGPIGP_01612 0.0 S alpha beta
GKDGPIGP_01613 3.7e-67
GKDGPIGP_01614 1.1e-290 pspC KT PspC domain
GKDGPIGP_01615 4.4e-236 tcsS3 KT PspC domain
GKDGPIGP_01616 3.2e-116 degU K helix_turn_helix, Lux Regulon
GKDGPIGP_01617 4.1e-168 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
GKDGPIGP_01618 7.5e-205 mdsC 2.7.1.162, 2.7.1.39 S Phosphotransferase enzyme family
GKDGPIGP_01619 0.0 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
GKDGPIGP_01620 2.5e-167 G ABC transporter permease
GKDGPIGP_01621 6.9e-173 malC G Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01622 1.2e-249 G Bacterial extracellular solute-binding protein
GKDGPIGP_01624 1.1e-242 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GKDGPIGP_01625 4.4e-182 I Diacylglycerol kinase catalytic domain
GKDGPIGP_01626 6.6e-162 arbG K CAT RNA binding domain
GKDGPIGP_01627 0.0 crr 2.7.1.193 G pts system, glucose-specific IIABC component
GKDGPIGP_01628 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
GKDGPIGP_01629 5.9e-194 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
GKDGPIGP_01630 3.6e-73 K Transcriptional regulator
GKDGPIGP_01631 2.7e-277 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GKDGPIGP_01632 1e-172 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GKDGPIGP_01633 9.1e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GKDGPIGP_01635 4.7e-98
GKDGPIGP_01636 3.6e-261 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GKDGPIGP_01637 4.3e-219 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
GKDGPIGP_01638 1e-215 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GKDGPIGP_01639 4e-81 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GKDGPIGP_01640 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GKDGPIGP_01641 7.7e-186 nusA K Participates in both transcription termination and antitermination
GKDGPIGP_01642 4.7e-126
GKDGPIGP_01643 1.9e-99 K helix_turn _helix lactose operon repressor
GKDGPIGP_01645 3.2e-152 E Transglutaminase/protease-like homologues
GKDGPIGP_01646 0.0 gcs2 S A circularly permuted ATPgrasp
GKDGPIGP_01647 8.7e-170 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
GKDGPIGP_01648 7.4e-60 rplQ J Ribosomal protein L17
GKDGPIGP_01649 3.4e-183 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GKDGPIGP_01650 1.5e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GKDGPIGP_01651 1.2e-61 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GKDGPIGP_01652 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
GKDGPIGP_01653 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GKDGPIGP_01654 2.2e-99 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
GKDGPIGP_01655 6.9e-248 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
GKDGPIGP_01656 8.1e-76 rplO J binds to the 23S rRNA
GKDGPIGP_01657 7e-26 rpmD J Ribosomal protein L30p/L7e
GKDGPIGP_01658 6.7e-96 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GKDGPIGP_01659 2.4e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GKDGPIGP_01660 5.4e-95 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GKDGPIGP_01661 5.5e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GKDGPIGP_01662 9.2e-18 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GKDGPIGP_01663 4.4e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GKDGPIGP_01664 1.3e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GKDGPIGP_01665 6.6e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GKDGPIGP_01666 6.4e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GKDGPIGP_01667 4.1e-37 rpmC J Belongs to the universal ribosomal protein uL29 family
GKDGPIGP_01668 2.2e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GKDGPIGP_01669 1.7e-100 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GKDGPIGP_01670 5.7e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GKDGPIGP_01671 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GKDGPIGP_01672 1.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GKDGPIGP_01673 7.5e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
GKDGPIGP_01674 3.1e-116 rplD J Forms part of the polypeptide exit tunnel
GKDGPIGP_01675 8.7e-116 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GKDGPIGP_01676 8e-51 rpsJ J Involved in the binding of tRNA to the ribosomes
GKDGPIGP_01677 1.2e-134 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
GKDGPIGP_01678 9.5e-145 ywiC S YwiC-like protein
GKDGPIGP_01679 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
GKDGPIGP_01680 1.2e-169 rhaR_1 K helix_turn_helix, arabinose operon control protein
GKDGPIGP_01681 1.5e-194 Z012_01000 1.1.1.14, 1.1.1.9 C Zinc-binding dehydrogenase
GKDGPIGP_01682 2.7e-196 EGP Major facilitator Superfamily
GKDGPIGP_01683 2.3e-215 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
GKDGPIGP_01684 6e-75 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GKDGPIGP_01685 2.2e-233 EGP Major facilitator Superfamily
GKDGPIGP_01686 2.3e-179 tdh 1.1.1.14 C Zinc-binding dehydrogenase
GKDGPIGP_01687 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
GKDGPIGP_01688 3.7e-82 rpsI J Belongs to the universal ribosomal protein uS9 family
GKDGPIGP_01689 3.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GKDGPIGP_01690 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
GKDGPIGP_01691 8.4e-117
GKDGPIGP_01692 3.4e-112 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
GKDGPIGP_01693 6.3e-185 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GKDGPIGP_01694 6.1e-110 M Bacterial capsule synthesis protein PGA_cap
GKDGPIGP_01695 6.3e-245 bglA 3.2.1.21 G Glycosyl hydrolase family 1
GKDGPIGP_01696 6.1e-160 U Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01697 5.5e-164 malC U Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01698 1.1e-242 malE G Bacterial extracellular solute-binding protein
GKDGPIGP_01699 3.1e-217 rbsR K helix_turn _helix lactose operon repressor
GKDGPIGP_01700 4.4e-21
GKDGPIGP_01702 3.5e-28 S EamA-like transporter family
GKDGPIGP_01703 2e-24 S EamA-like transporter family
GKDGPIGP_01704 1e-21 S EamA-like transporter family
GKDGPIGP_01705 1.8e-237 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GKDGPIGP_01706 1.4e-223 dapC E Aminotransferase class I and II
GKDGPIGP_01707 2.9e-59 fdxA C 4Fe-4S binding domain
GKDGPIGP_01708 2.8e-269 E aromatic amino acid transport protein AroP K03293
GKDGPIGP_01709 4.5e-214 murB 1.3.1.98 M Cell wall formation
GKDGPIGP_01710 4.1e-25 rpmG J Ribosomal protein L33
GKDGPIGP_01714 1.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GKDGPIGP_01715 4e-130
GKDGPIGP_01716 5.7e-85 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
GKDGPIGP_01717 9.5e-56 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
GKDGPIGP_01718 4.3e-31 fmdB S Putative regulatory protein
GKDGPIGP_01719 3.6e-106 flgA NO SAF
GKDGPIGP_01720 3.3e-18 L Superfamily I DNA and RNA helicases and helicase subunits
GKDGPIGP_01721 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
GKDGPIGP_01722 4e-192 T Forkhead associated domain
GKDGPIGP_01723 9.3e-49 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
GKDGPIGP_01724 2.4e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GKDGPIGP_01725 9e-147 3.2.1.8 S alpha beta
GKDGPIGP_01726 1.1e-251 pbuO S Permease family
GKDGPIGP_01727 2.1e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GKDGPIGP_01728 2.3e-171 pstA P Phosphate transport system permease
GKDGPIGP_01729 1.2e-156 pstC P probably responsible for the translocation of the substrate across the membrane
GKDGPIGP_01730 2.6e-195 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
GKDGPIGP_01731 2.5e-141 KT Transcriptional regulatory protein, C terminal
GKDGPIGP_01732 5.7e-207 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
GKDGPIGP_01733 1e-240 EGP Sugar (and other) transporter
GKDGPIGP_01734 6.3e-123 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GKDGPIGP_01735 1.9e-236 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GKDGPIGP_01736 4.1e-217 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GKDGPIGP_01737 5.9e-85 ebgC G YhcH YjgK YiaL family protein
GKDGPIGP_01738 0.0 ebgA 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GKDGPIGP_01739 5.6e-115 pgmB 5.4.2.6 S phosphonoacetaldehyde hydrolase activity
GKDGPIGP_01740 1.2e-155 EG EamA-like transporter family
GKDGPIGP_01741 0.0 kojP 2.4.1.230 GH65 G Glycosyl hydrolase family 65 central catalytic domain
GKDGPIGP_01742 1.9e-152 P Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01743 5.3e-170 malC U Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01744 1.8e-237 G Bacterial extracellular solute-binding protein
GKDGPIGP_01745 4.6e-188 K Periplasmic binding protein domain
GKDGPIGP_01746 2.7e-100 U MarC family integral membrane protein
GKDGPIGP_01747 1.1e-266 pepC 3.4.22.40 E Peptidase C1-like family
GKDGPIGP_01748 1e-267 pepC 3.4.22.40 E Peptidase C1-like family
GKDGPIGP_01749 3.6e-45 D nuclear chromosome segregation
GKDGPIGP_01750 1.7e-125 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GKDGPIGP_01751 8.4e-151 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
GKDGPIGP_01752 8e-199 yfiH Q Multi-copper polyphenol oxidoreductase laccase
GKDGPIGP_01753 3.1e-300 yegQ O Peptidase family U32 C-terminal domain
GKDGPIGP_01754 4.1e-178 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
GKDGPIGP_01755 7.7e-103 rsmD 2.1.1.171 L Conserved hypothetical protein 95
GKDGPIGP_01756 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
GKDGPIGP_01757 2.5e-29 rpmB J Ribosomal L28 family
GKDGPIGP_01758 1.6e-196 yegV G pfkB family carbohydrate kinase
GKDGPIGP_01759 1.1e-234 yxiO S Vacuole effluxer Atg22 like
GKDGPIGP_01760 1.2e-80 soxR K helix_turn_helix, mercury resistance
GKDGPIGP_01761 2.4e-59 T Toxic component of a toxin-antitoxin (TA) module
GKDGPIGP_01762 8.1e-54 relB L RelB antitoxin
GKDGPIGP_01763 4.3e-23 yxiO G Major facilitator Superfamily
GKDGPIGP_01764 1.8e-182 K Helix-turn-helix XRE-family like proteins
GKDGPIGP_01765 2.5e-115 S Alpha/beta hydrolase family
GKDGPIGP_01769 1e-56 XK27_04590 S NADPH-dependent FMN reductase
GKDGPIGP_01771 8.5e-301 pccB I Carboxyl transferase domain
GKDGPIGP_01772 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
GKDGPIGP_01773 1.8e-91 bioY S BioY family
GKDGPIGP_01774 1.4e-150 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
GKDGPIGP_01775 0.0
GKDGPIGP_01776 2.2e-165 QT PucR C-terminal helix-turn-helix domain
GKDGPIGP_01777 2.7e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
GKDGPIGP_01778 1e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GKDGPIGP_01779 2.5e-146 K Psort location Cytoplasmic, score
GKDGPIGP_01780 7e-110 nusG K Participates in transcription elongation, termination and antitermination
GKDGPIGP_01781 4.7e-32 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
GKDGPIGP_01783 7.6e-230 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
GKDGPIGP_01784 1.1e-218 G polysaccharide deacetylase
GKDGPIGP_01785 8.3e-199 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
GKDGPIGP_01786 2.3e-311 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GKDGPIGP_01787 5.8e-39 rpmA J Ribosomal L27 protein
GKDGPIGP_01788 1.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
GKDGPIGP_01789 0.0 rne 3.1.26.12 J Ribonuclease E/G family
GKDGPIGP_01790 7.3e-233 dapE 3.5.1.18 E Peptidase dimerisation domain
GKDGPIGP_01791 1.9e-167 mdcF S Transporter, auxin efflux carrier (AEC) family protein
GKDGPIGP_01792 5.7e-166 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
GKDGPIGP_01793 3.2e-149 S Amidohydrolase
GKDGPIGP_01794 5.4e-202 fucP G Major Facilitator Superfamily
GKDGPIGP_01795 2.8e-148 IQ KR domain
GKDGPIGP_01796 1.1e-250 4.2.1.68 M Enolase C-terminal domain-like
GKDGPIGP_01797 3.5e-191 K Bacterial regulatory proteins, lacI family
GKDGPIGP_01798 3.7e-255 V Efflux ABC transporter, permease protein
GKDGPIGP_01799 3.3e-138 V ATPases associated with a variety of cellular activities
GKDGPIGP_01800 1.6e-28 S Protein of unknown function (DUF1778)
GKDGPIGP_01801 2e-91 K Acetyltransferase (GNAT) family
GKDGPIGP_01802 1.7e-276 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
GKDGPIGP_01803 4.6e-184 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
GKDGPIGP_01804 8.3e-238 hom 1.1.1.3 E Homoserine dehydrogenase
GKDGPIGP_01805 4.3e-54 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
GKDGPIGP_01806 5.1e-55 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GKDGPIGP_01807 7.7e-302 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
GKDGPIGP_01808 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
GKDGPIGP_01809 8.1e-131 K Bacterial regulatory proteins, tetR family
GKDGPIGP_01810 4.7e-222 G Transmembrane secretion effector
GKDGPIGP_01811 6.8e-256 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GKDGPIGP_01812 5.3e-256 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
GKDGPIGP_01813 2.1e-157 ET Bacterial periplasmic substrate-binding proteins
GKDGPIGP_01814 3.7e-120 ytmL P Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01815 3.6e-140 P Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01816 1.3e-104 S L-2-amino-thiazoline-4-carboxylic acid hydrolase
GKDGPIGP_01817 1.3e-131 yxeO 3.6.3.21 E ATPases associated with a variety of cellular activities
GKDGPIGP_01818 1.8e-220 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
GKDGPIGP_01819 3.7e-21 2.7.13.3 T Histidine kinase
GKDGPIGP_01820 1.4e-17 S Bacterial PH domain
GKDGPIGP_01821 2.7e-131 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
GKDGPIGP_01822 1.3e-273 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
GKDGPIGP_01823 7.5e-141 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
GKDGPIGP_01824 5.4e-261 S Calcineurin-like phosphoesterase
GKDGPIGP_01825 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
GKDGPIGP_01826 4.4e-229 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
GKDGPIGP_01827 1.4e-129
GKDGPIGP_01828 0.0 G N-terminal domain of (some) glycogen debranching enzymes
GKDGPIGP_01829 1.6e-49 P Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01830 3.9e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GKDGPIGP_01831 2.8e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GKDGPIGP_01832 2.6e-216 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
GKDGPIGP_01833 3e-217 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
GKDGPIGP_01835 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GKDGPIGP_01836 6.2e-163 S Auxin Efflux Carrier
GKDGPIGP_01837 1.8e-158 fahA Q Fumarylacetoacetate (FAA) hydrolase family
GKDGPIGP_01838 1.5e-119 S Domain of unknown function (DUF4190)
GKDGPIGP_01839 5e-165
GKDGPIGP_01840 3.2e-236 glf 5.4.99.9 M UDP-galactopyranose mutase
GKDGPIGP_01841 5.5e-45 5.3.1.27 G sugar phosphate isomerase involved in capsule formation
GKDGPIGP_01842 2.2e-58 G Branched-chain amino acid transport system / permease component
GKDGPIGP_01843 7.3e-72 P branched-chain amino acid ABC transporter, permease protein
GKDGPIGP_01844 6.3e-120 G ATPases associated with a variety of cellular activities
GKDGPIGP_01845 2.1e-79 G ABC-type sugar transport system periplasmic component
GKDGPIGP_01846 3e-167 xylB 1.1.1.57, 2.7.1.17 G Belongs to the FGGY kinase family
GKDGPIGP_01847 1e-75 xylR GK ROK family
GKDGPIGP_01848 8.7e-37
GKDGPIGP_01849 4.2e-200 M Glycosyltransferase like family 2
GKDGPIGP_01850 1.3e-182 S Predicted membrane protein (DUF2142)
GKDGPIGP_01851 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
GKDGPIGP_01852 0.0 GT2,GT4 M Glycosyl transferase family 2
GKDGPIGP_01853 1.1e-164 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
GKDGPIGP_01854 1.4e-118 rgpC U Transport permease protein
GKDGPIGP_01855 1.2e-168 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
GKDGPIGP_01856 8.7e-289 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
GKDGPIGP_01857 5.5e-205 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
GKDGPIGP_01858 0.0
GKDGPIGP_01859 8.6e-168 rfbJ M Glycosyl transferase family 2
GKDGPIGP_01860 4.8e-22 M nuclease
GKDGPIGP_01861 3.8e-67 M L,D-transpeptidase catalytic domain
GKDGPIGP_01862 1e-135 lytC 3.1.4.46, 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
GKDGPIGP_01864 3.8e-225 K Cell envelope-related transcriptional attenuator domain
GKDGPIGP_01865 1.4e-262 V ABC transporter permease
GKDGPIGP_01866 2.8e-184 V ABC transporter
GKDGPIGP_01867 3.1e-144 T HD domain
GKDGPIGP_01868 7.9e-160 S Glutamine amidotransferase domain
GKDGPIGP_01869 0.0 kup P Transport of potassium into the cell
GKDGPIGP_01870 8.3e-187 tatD L TatD related DNase
GKDGPIGP_01871 0.0 yknV V ABC transporter
GKDGPIGP_01872 0.0 mdlA2 V ABC transporter
GKDGPIGP_01873 8.7e-23 S ATPase domain predominantly from Archaea
GKDGPIGP_01874 7e-253 S Domain of unknown function (DUF4143)
GKDGPIGP_01875 3e-194 G Glycosyl hydrolases family 43
GKDGPIGP_01876 1.1e-153 U Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01877 5.9e-177 U Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01878 1.2e-241 G Bacterial extracellular solute-binding protein
GKDGPIGP_01879 3.4e-194 K helix_turn _helix lactose operon repressor
GKDGPIGP_01880 0.0 lacZ 3.2.1.23 G Beta-galactosidase trimerisation domain
GKDGPIGP_01881 1.6e-268 S AAA domain
GKDGPIGP_01882 3.1e-54 EGP Major facilitator Superfamily
GKDGPIGP_01883 4e-34 EGP Major facilitator Superfamily
GKDGPIGP_01884 5.7e-21 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
GKDGPIGP_01885 0.0 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
GKDGPIGP_01886 0.0 oppD P Belongs to the ABC transporter superfamily
GKDGPIGP_01887 1.2e-172 dppC EP N-terminal TM domain of oligopeptide transport permease C
GKDGPIGP_01888 1e-176 appB EP Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01889 3.8e-279 pepC 3.4.22.40 E Peptidase C1-like family
GKDGPIGP_01890 6.7e-47
GKDGPIGP_01891 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GKDGPIGP_01892 9.4e-121
GKDGPIGP_01893 4.6e-180 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GKDGPIGP_01895 8.6e-257 G MFS/sugar transport protein
GKDGPIGP_01896 5.1e-181 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GKDGPIGP_01897 0.0 lmrA2 V ABC transporter transmembrane region
GKDGPIGP_01898 0.0 lmrA1 V ABC transporter, ATP-binding protein
GKDGPIGP_01899 9.2e-79 ydgJ K helix_turn_helix multiple antibiotic resistance protein
GKDGPIGP_01900 2.2e-279 cycA E Amino acid permease
GKDGPIGP_01901 0.0 V FtsX-like permease family
GKDGPIGP_01902 7.5e-129 V ABC transporter
GKDGPIGP_01903 2.3e-268 aroP E aromatic amino acid transport protein AroP K03293
GKDGPIGP_01904 1.7e-105 S Protein of unknown function, DUF624
GKDGPIGP_01905 1.2e-152 rafG G ABC transporter permease
GKDGPIGP_01906 4.4e-147 malC G Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01907 1.1e-184 K Psort location Cytoplasmic, score
GKDGPIGP_01908 2.1e-252 amyE G Bacterial extracellular solute-binding protein
GKDGPIGP_01909 3.6e-102 G Phosphoglycerate mutase family
GKDGPIGP_01910 1.2e-59 S Protein of unknown function (DUF4235)
GKDGPIGP_01911 7.4e-130 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
GKDGPIGP_01912 0.0 pip S YhgE Pip domain protein
GKDGPIGP_01913 5.9e-279 pip S YhgE Pip domain protein
GKDGPIGP_01914 1.8e-40
GKDGPIGP_01915 9.2e-10
GKDGPIGP_01917 3.6e-145 cobB2 K Sir2 family
GKDGPIGP_01918 1.5e-231 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
GKDGPIGP_01919 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
GKDGPIGP_01920 2.9e-154 G Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01921 1.1e-143 malC G Binding-protein-dependent transport system inner membrane component
GKDGPIGP_01922 8.9e-245 msmE7 G Bacterial extracellular solute-binding protein
GKDGPIGP_01923 1.2e-230 nagC GK ROK family
GKDGPIGP_01924 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
GKDGPIGP_01925 8.3e-78 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
GKDGPIGP_01926 0.0 yjcE P Sodium/hydrogen exchanger family
GKDGPIGP_01927 3.3e-120 S membrane transporter protein
GKDGPIGP_01928 8.1e-145 ypfH S Phospholipase/Carboxylesterase
GKDGPIGP_01929 6.4e-154
GKDGPIGP_01930 9e-112 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
GKDGPIGP_01931 1.2e-37
GKDGPIGP_01932 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
GKDGPIGP_01933 2e-16 K helix_turn _helix lactose operon repressor
GKDGPIGP_01934 7.5e-86 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GKDGPIGP_01935 1.6e-288 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
GKDGPIGP_01936 3.5e-206 EGP Major facilitator Superfamily
GKDGPIGP_01937 1.2e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GKDGPIGP_01938 5.9e-168 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
GKDGPIGP_01939 4.2e-302 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
GKDGPIGP_01940 1.6e-271 KLT Domain of unknown function (DUF4032)
GKDGPIGP_01941 4.4e-155
GKDGPIGP_01942 7.6e-18 tnp7109-21 L Integrase core domain
GKDGPIGP_01943 1.1e-131 K helix_turn _helix lactose operon repressor
GKDGPIGP_01944 4.2e-146 G Periplasmic binding protein domain
GKDGPIGP_01945 8.7e-178 3.6.3.17 G ATPases associated with a variety of cellular activities
GKDGPIGP_01946 5e-142 U Branched-chain amino acid transport system / permease component
GKDGPIGP_01947 1e-185
GKDGPIGP_01948 1.2e-146 tnp3514b L Winged helix-turn helix
GKDGPIGP_01949 6.2e-48 S LPXTG-motif cell wall anchor domain protein
GKDGPIGP_01950 4.3e-211 ugpC E Belongs to the ABC transporter superfamily
GKDGPIGP_01951 6e-137 K UTRA domain
GKDGPIGP_01952 6.4e-241 ulaA 2.7.1.194 S PTS system sugar-specific permease component
GKDGPIGP_01953 3.7e-45 ulaB 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
GKDGPIGP_01954 2.1e-73 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GKDGPIGP_01955 1.4e-220 2.4.1.166 GT2 M Glycosyltransferase like family 2
GKDGPIGP_01956 5.1e-142 K LytTr DNA-binding domain
GKDGPIGP_01957 3.2e-229 T GHKL domain
GKDGPIGP_01958 1.3e-190 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GKDGPIGP_01960 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GKDGPIGP_01961 2.1e-88 nrdI F Probably involved in ribonucleotide reductase function
GKDGPIGP_01962 2e-42 nrdH O Glutaredoxin
GKDGPIGP_01963 9.8e-123 S Psort location CytoplasmicMembrane, score
GKDGPIGP_01964 0.0 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
GKDGPIGP_01965 3.1e-121 K Helix-turn-helix XRE-family like proteins
GKDGPIGP_01966 6.8e-127 S Protein of unknown function (DUF3990)
GKDGPIGP_01967 7e-71 kcsA U Ion channel
GKDGPIGP_01968 0.0 3.2.1.21 GH3 G Fibronectin type III-like domain
GKDGPIGP_01969 0.0 KLT Protein tyrosine kinase
GKDGPIGP_01970 1.3e-134 O Thioredoxin
GKDGPIGP_01972 2e-216 S G5
GKDGPIGP_01973 2.2e-168 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
GKDGPIGP_01974 1e-176 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
GKDGPIGP_01975 4.8e-111 S LytR cell envelope-related transcriptional attenuator
GKDGPIGP_01976 3.2e-283 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
GKDGPIGP_01977 9e-165 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
GKDGPIGP_01978 0.0
GKDGPIGP_01979 0.0 murJ KLT MviN-like protein
GKDGPIGP_01980 3.1e-176 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
GKDGPIGP_01981 6.1e-222 parB K Belongs to the ParB family
GKDGPIGP_01982 9.6e-175 parA D CobQ CobB MinD ParA nucleotide binding domain protein
GKDGPIGP_01983 1.2e-123 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
GKDGPIGP_01984 1.5e-92 jag S Putative single-stranded nucleic acids-binding domain
GKDGPIGP_01985 1.4e-181 yidC U Membrane protein insertase, YidC Oxa1 family
GKDGPIGP_01986 2.9e-57 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
GKDGPIGP_01987 2.6e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)