ORF_ID e_value Gene_name EC_number CAZy COGs Description
APDLHJFM_00001 9.2e-10
APDLHJFM_00002 1.7e-57 L Transposase, Mutator family
APDLHJFM_00003 2.6e-73 parA D AAA domain
APDLHJFM_00004 1.4e-37
APDLHJFM_00005 6.3e-282 S ATPases associated with a variety of cellular activities
APDLHJFM_00006 4.9e-93 K FR47-like protein
APDLHJFM_00007 1.3e-119 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
APDLHJFM_00008 0.0 XK27_00515 D Cell surface antigen C-terminus
APDLHJFM_00009 1.5e-133 bltR K bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
APDLHJFM_00010 3.5e-196 pacB 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
APDLHJFM_00011 6.9e-90
APDLHJFM_00013 1.3e-67 S Helix-turn-helix domain
APDLHJFM_00014 3.6e-105 S PIN domain
APDLHJFM_00015 1.6e-246
APDLHJFM_00016 1.7e-15 L Transposase, Mutator family
APDLHJFM_00017 3.3e-203 L Transposase, Mutator family
APDLHJFM_00018 8e-39
APDLHJFM_00019 5.3e-145
APDLHJFM_00020 1.7e-42 S PrgI family protein
APDLHJFM_00021 0.0 trsE U type IV secretory pathway VirB4
APDLHJFM_00022 2.5e-204 isp2 3.2.1.96 M CHAP domain
APDLHJFM_00023 5e-179
APDLHJFM_00024 1.7e-190 dprA LU DNA recombination-mediator protein A
APDLHJFM_00025 1.3e-159 S competence protein
APDLHJFM_00026 4.3e-99 3.6.4.12 L UvrD/REP helicase N-terminal domain
APDLHJFM_00027 5.6e-297 L AAA ATPase domain
APDLHJFM_00028 6.5e-215 U Type IV secretory system Conjugative DNA transfer
APDLHJFM_00029 3.2e-22 S Transposon-encoded protein TnpW
APDLHJFM_00030 1e-150 VP2944 Q Leucine carboxyl methyltransferase
APDLHJFM_00031 4e-112 traA D Psort location Cytoplasmic, score 8.96
APDLHJFM_00032 3.5e-94 traA D Psort location Cytoplasmic, score 8.96
APDLHJFM_00033 5.8e-36 S Protein of unknown function (DUF3847)
APDLHJFM_00034 6.8e-95 M1-431 S Protein of unknown function (DUF1706)
APDLHJFM_00035 0.0 tnpX L recombinase activity
APDLHJFM_00036 1.3e-93 U Type IV secretory system Conjugative DNA transfer
APDLHJFM_00038 4e-53
APDLHJFM_00039 1.6e-224 ard S Antirestriction protein (ArdA)
APDLHJFM_00040 1.2e-58
APDLHJFM_00041 1.4e-101 S Helix-turn-helix domain
APDLHJFM_00042 1.1e-84 S Helix-turn-helix domain
APDLHJFM_00043 0.0 4.2.1.53 S MCRA family
APDLHJFM_00044 1.8e-167 dkgA 1.1.1.346 C Aldo/keto reductase family
APDLHJFM_00045 7.8e-35 yneG S Domain of unknown function (DUF4186)
APDLHJFM_00046 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
APDLHJFM_00047 1.7e-201 K WYL domain
APDLHJFM_00048 9e-178 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
APDLHJFM_00049 5.4e-90 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
APDLHJFM_00050 5.3e-22 tccB2 V DivIVA protein
APDLHJFM_00051 4.9e-45 yggT S YGGT family
APDLHJFM_00052 5.9e-69 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
APDLHJFM_00053 1.2e-211 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
APDLHJFM_00054 5.7e-249 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
APDLHJFM_00055 6.7e-297 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
APDLHJFM_00056 8.8e-157 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
APDLHJFM_00057 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
APDLHJFM_00058 8.4e-229 O AAA domain (Cdc48 subfamily)
APDLHJFM_00059 4.6e-146 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
APDLHJFM_00060 5.6e-62 S Thiamine-binding protein
APDLHJFM_00061 7.1e-248 ydjK G Sugar (and other) transporter
APDLHJFM_00062 1.8e-214 2.7.13.3 T Histidine kinase
APDLHJFM_00063 6.1e-123 K helix_turn_helix, Lux Regulon
APDLHJFM_00064 1.1e-189
APDLHJFM_00065 1e-257 O SERine Proteinase INhibitors
APDLHJFM_00066 1.8e-195 K helix_turn _helix lactose operon repressor
APDLHJFM_00067 6.2e-241 lacY P LacY proton/sugar symporter
APDLHJFM_00068 7.3e-302 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
APDLHJFM_00069 3.2e-141 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
APDLHJFM_00070 2.5e-149 C Putative TM nitroreductase
APDLHJFM_00071 6.4e-198 S Glycosyltransferase, group 2 family protein
APDLHJFM_00072 1.3e-93 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
APDLHJFM_00073 0.0 ecfA GP ABC transporter, ATP-binding protein
APDLHJFM_00074 3.1e-47 yhbY J CRS1_YhbY
APDLHJFM_00075 1.4e-54 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
APDLHJFM_00076 6.9e-52
APDLHJFM_00077 3.8e-187 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
APDLHJFM_00078 4.2e-251 EGP Major facilitator Superfamily
APDLHJFM_00079 2.3e-33 mtrB 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
APDLHJFM_00080 6.9e-11 KT Transcriptional regulatory protein, C terminal
APDLHJFM_00081 1.8e-251 rarA L Recombination factor protein RarA
APDLHJFM_00082 0.0 helY L DEAD DEAH box helicase
APDLHJFM_00083 2.8e-199 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
APDLHJFM_00085 2.9e-287 ydfD EK Alanine-glyoxylate amino-transferase
APDLHJFM_00086 1.3e-111 argO S LysE type translocator
APDLHJFM_00087 1.3e-290 phoN I PAP2 superfamily
APDLHJFM_00088 1e-193 gluD E Binding-protein-dependent transport system inner membrane component
APDLHJFM_00089 2e-110 gluC E Binding-protein-dependent transport system inner membrane component
APDLHJFM_00090 5.3e-147 gluB ET Belongs to the bacterial solute-binding protein 3 family
APDLHJFM_00091 3.1e-153 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
APDLHJFM_00092 6.1e-102 S Aminoacyl-tRNA editing domain
APDLHJFM_00093 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
APDLHJFM_00094 5.9e-261 hisS 6.1.1.21 J Histidyl-tRNA synthetase
APDLHJFM_00095 4.4e-224 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
APDLHJFM_00096 0.0 3.1.3.5 F 5'-nucleotidase, C-terminal domain
APDLHJFM_00097 9.6e-59 lipA I Hydrolase, alpha beta domain protein
APDLHJFM_00098 2.1e-130 xylE U Sugar (and other) transporter
APDLHJFM_00099 3e-26 K helix_turn_helix, arabinose operon control protein
APDLHJFM_00100 0.0 clpC O ATPase family associated with various cellular activities (AAA)
APDLHJFM_00101 2.4e-178 uspA T Belongs to the universal stress protein A family
APDLHJFM_00102 1.4e-176 S Protein of unknown function (DUF3027)
APDLHJFM_00103 1.7e-66 cspB K 'Cold-shock' DNA-binding domain
APDLHJFM_00104 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
APDLHJFM_00105 2e-132 KT Response regulator receiver domain protein
APDLHJFM_00106 4.3e-99
APDLHJFM_00107 1.6e-32 S Proteins of 100 residues with WXG
APDLHJFM_00108 2.7e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
APDLHJFM_00109 6.1e-38 K 'Cold-shock' DNA-binding domain
APDLHJFM_00110 6.9e-84 S LytR cell envelope-related transcriptional attenuator
APDLHJFM_00111 3.8e-133 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
APDLHJFM_00112 4.2e-187 moxR S ATPase family associated with various cellular activities (AAA)
APDLHJFM_00113 1.3e-163 S Protein of unknown function DUF58
APDLHJFM_00114 3.9e-85
APDLHJFM_00115 3.3e-189 S von Willebrand factor (vWF) type A domain
APDLHJFM_00116 8.4e-153 S von Willebrand factor (vWF) type A domain
APDLHJFM_00117 3.1e-56
APDLHJFM_00118 2.2e-253 S PGAP1-like protein
APDLHJFM_00119 1.3e-111 ykoE S ABC-type cobalt transport system, permease component
APDLHJFM_00120 3.3e-280 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
APDLHJFM_00121 0.0 S Lysylphosphatidylglycerol synthase TM region
APDLHJFM_00122 8.1e-42 hup L Belongs to the bacterial histone-like protein family
APDLHJFM_00123 5.4e-286 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
APDLHJFM_00125 8.9e-175 hisN 3.1.3.25 G Inositol monophosphatase family
APDLHJFM_00126 0.0 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
APDLHJFM_00127 2.1e-134 alsE 5.1.3.1 G Ribulose-phosphate 3 epimerase family
APDLHJFM_00128 4.8e-162 G Phosphotransferase System
APDLHJFM_00129 2.1e-46 fruA 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
APDLHJFM_00130 1.1e-78 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
APDLHJFM_00131 3e-72 H Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
APDLHJFM_00132 2.6e-280 manR K PRD domain
APDLHJFM_00133 7.6e-137 3.8.1.2 S Haloacid dehalogenase-like hydrolase
APDLHJFM_00134 1.5e-286 arc O AAA ATPase forming ring-shaped complexes
APDLHJFM_00135 6.5e-125 apl 3.1.3.1 S SNARE associated Golgi protein
APDLHJFM_00136 7.2e-119 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
APDLHJFM_00137 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
APDLHJFM_00138 1.2e-131 3.8.1.2 S Haloacid dehalogenase-like hydrolase
APDLHJFM_00139 3.2e-189 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
APDLHJFM_00140 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
APDLHJFM_00141 4.2e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
APDLHJFM_00142 7.9e-227 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
APDLHJFM_00143 1.9e-25 3.1.21.3 V Type I restriction modification DNA specificity domain
APDLHJFM_00144 9e-34 3.1.21.3 V Type I restriction modification DNA specificity domain
APDLHJFM_00145 8.3e-43 3.1.21.3 L PFAM restriction modification system DNA specificity domain
APDLHJFM_00146 8.8e-244 hsdM 2.1.1.72 V HsdM N-terminal domain
APDLHJFM_00147 0.0 hsdR 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
APDLHJFM_00148 1.4e-158 I type I phosphodiesterase nucleotide pyrophosphatase
APDLHJFM_00149 4.8e-202 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
APDLHJFM_00150 5.8e-161 U Binding-protein-dependent transport system inner membrane component
APDLHJFM_00151 1.5e-150 U Binding-protein-dependent transport system inner membrane component
APDLHJFM_00152 1.3e-199 P Bacterial extracellular solute-binding protein
APDLHJFM_00153 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
APDLHJFM_00154 3.1e-168 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
APDLHJFM_00155 1.9e-68 rbsD 5.4.99.62 G RbsD / FucU transport protein family
APDLHJFM_00156 1.8e-162 rbsB G Periplasmic binding protein domain
APDLHJFM_00157 1.1e-157 rbsC U Branched-chain amino acid transport system / permease component
APDLHJFM_00158 1.6e-277 rbsA 3.6.3.17 G ATPases associated with a variety of cellular activities
APDLHJFM_00159 3.3e-186 rbsR K helix_turn _helix lactose operon repressor
APDLHJFM_00160 2.4e-38 L Transposase
APDLHJFM_00161 7.6e-261 EGP Major Facilitator Superfamily
APDLHJFM_00162 4.1e-164 rbsK 2.7.1.15 G Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
APDLHJFM_00163 7.6e-230 bdhA C Iron-containing alcohol dehydrogenase
APDLHJFM_00164 7.8e-131 3.1.3.18 S Haloacid dehalogenase-like hydrolase
APDLHJFM_00165 2.8e-190 rihB 3.2.2.1, 3.2.2.8 F Inosine-uridine preferring nucleoside hydrolase
APDLHJFM_00166 2.6e-180 ydjH 2.7.1.15 G pfkB family carbohydrate kinase
APDLHJFM_00167 1.4e-118 trpF 5.3.1.24 E N-(5'phosphoribosyl)anthranilate (PRA) isomerase
APDLHJFM_00168 1.3e-153 P ATPases associated with a variety of cellular activities
APDLHJFM_00169 5.7e-152 P ATPases associated with a variety of cellular activities
APDLHJFM_00170 1.4e-139 cbiQ P Cobalt transport protein
APDLHJFM_00171 1.8e-100 2.7.7.65 T ECF transporter, substrate-specific component
APDLHJFM_00172 0.0 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
APDLHJFM_00173 0.0 V ABC transporter transmembrane region
APDLHJFM_00174 0.0 V ABC transporter, ATP-binding protein
APDLHJFM_00175 6.8e-90 K MarR family
APDLHJFM_00176 1.5e-177 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
APDLHJFM_00177 6.2e-240 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
APDLHJFM_00178 1.3e-69 S Nucleotidyltransferase substrate binding protein like
APDLHJFM_00179 1.6e-45 S Nucleotidyltransferase domain
APDLHJFM_00181 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
APDLHJFM_00182 2.8e-142 K Bacterial regulatory proteins, tetR family
APDLHJFM_00183 5.5e-255 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
APDLHJFM_00184 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
APDLHJFM_00185 6.5e-136 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
APDLHJFM_00186 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
APDLHJFM_00187 1.8e-256 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
APDLHJFM_00188 3.5e-40 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
APDLHJFM_00189 8.7e-91 ywrO 1.6.5.2 S Flavodoxin-like fold
APDLHJFM_00190 0.0 fadD 6.2.1.3 I AMP-binding enzyme
APDLHJFM_00191 3.2e-65 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
APDLHJFM_00192 3.7e-78 F Nucleoside 2-deoxyribosyltransferase
APDLHJFM_00194 6.3e-202 S Endonuclease/Exonuclease/phosphatase family
APDLHJFM_00195 1.5e-180 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
APDLHJFM_00196 6e-235 aspB E Aminotransferase class-V
APDLHJFM_00197 5.9e-202 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
APDLHJFM_00198 5.1e-89 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
APDLHJFM_00199 4.1e-101 XK27_03610 K Acetyltransferase (GNAT) domain
APDLHJFM_00200 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
APDLHJFM_00201 1.2e-146 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
APDLHJFM_00202 2.1e-249 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
APDLHJFM_00203 6e-151 map 3.4.11.18 E Methionine aminopeptidase
APDLHJFM_00204 1.7e-119 S Short repeat of unknown function (DUF308)
APDLHJFM_00205 0.0 pepO 3.4.24.71 O Peptidase family M13
APDLHJFM_00206 1.4e-116 L Single-strand binding protein family
APDLHJFM_00207 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
APDLHJFM_00208 1.5e-155 pflA 1.97.1.4 O Radical SAM superfamily
APDLHJFM_00209 2.8e-268 recD2 3.6.4.12 L PIF1-like helicase
APDLHJFM_00210 4.8e-122 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
APDLHJFM_00211 4.8e-293 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
APDLHJFM_00212 3e-213 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
APDLHJFM_00213 1.5e-118 ywlC 2.7.7.87 J Belongs to the SUA5 family
APDLHJFM_00214 6.6e-125 livF E ATPases associated with a variety of cellular activities
APDLHJFM_00215 7e-161 E Branched-chain amino acid ATP-binding cassette transporter
APDLHJFM_00216 1e-188 livM U Belongs to the binding-protein-dependent transport system permease family
APDLHJFM_00217 3.6e-107 U Belongs to the binding-protein-dependent transport system permease family
APDLHJFM_00218 7.5e-206 livK E Receptor family ligand binding region
APDLHJFM_00219 2.4e-164 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
APDLHJFM_00220 4.1e-190 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
APDLHJFM_00221 1.3e-36 rpmE J Binds the 23S rRNA
APDLHJFM_00223 1.1e-99 yebQ EGP Major facilitator Superfamily
APDLHJFM_00224 4.5e-146
APDLHJFM_00225 1.5e-68 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
APDLHJFM_00226 6e-165 dkgB S Oxidoreductase, aldo keto reductase family protein
APDLHJFM_00227 1.3e-19 lmrB U Major Facilitator Superfamily
APDLHJFM_00228 4.8e-88 K Winged helix DNA-binding domain
APDLHJFM_00229 1.9e-175 glkA 2.7.1.2 G ROK family
APDLHJFM_00231 4.2e-309 EGP Major Facilitator Superfamily
APDLHJFM_00232 0.0 yjjK S ATP-binding cassette protein, ChvD family
APDLHJFM_00233 3.3e-169 tesB I Thioesterase-like superfamily
APDLHJFM_00234 3.2e-92 S Protein of unknown function (DUF3180)
APDLHJFM_00235 1.2e-299 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
APDLHJFM_00236 8.1e-157 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
APDLHJFM_00237 3.4e-115 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
APDLHJFM_00238 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
APDLHJFM_00239 2.7e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
APDLHJFM_00240 1.3e-210 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
APDLHJFM_00241 2.2e-250 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
APDLHJFM_00242 3.7e-299
APDLHJFM_00243 1.8e-190 natA V ATPases associated with a variety of cellular activities
APDLHJFM_00244 4.7e-235 epsG M Glycosyl transferase family 21
APDLHJFM_00245 3.6e-280 S AI-2E family transporter
APDLHJFM_00246 2.3e-178 3.4.14.13 M Glycosyltransferase like family 2
APDLHJFM_00247 5.2e-204 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
APDLHJFM_00248 1.1e-261 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
APDLHJFM_00251 2.4e-162 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
APDLHJFM_00253 5.7e-21 G ABC transporter permease
APDLHJFM_00254 8.5e-57 G ABC transporter permease
APDLHJFM_00255 6e-149 malC G Binding-protein-dependent transport system inner membrane component
APDLHJFM_00256 2e-49 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
APDLHJFM_00257 1.2e-68 K Psort location Cytoplasmic, score 8.87
APDLHJFM_00258 1e-32 S ASCH
APDLHJFM_00259 1.2e-35 S ASCH
APDLHJFM_00260 1.2e-32 K Transcriptional regulator, AbiEi antitoxin
APDLHJFM_00261 6.5e-190 V VanZ like family
APDLHJFM_00262 1.9e-89 EGP Major facilitator Superfamily
APDLHJFM_00263 8.2e-260 mmuP E amino acid
APDLHJFM_00264 3.9e-156 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
APDLHJFM_00265 1.1e-129 S SOS response associated peptidase (SRAP)
APDLHJFM_00266 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
APDLHJFM_00267 1.2e-160 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
APDLHJFM_00268 1.5e-185 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
APDLHJFM_00269 9.4e-113 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
APDLHJFM_00270 9.9e-42 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
APDLHJFM_00271 7.9e-157 hisG 2.4.2.17 F ATP phosphoribosyltransferase
APDLHJFM_00272 1.2e-106 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
APDLHJFM_00273 4.6e-169 S Bacterial protein of unknown function (DUF881)
APDLHJFM_00274 3.9e-35 sbp S Protein of unknown function (DUF1290)
APDLHJFM_00275 8.5e-140 S Bacterial protein of unknown function (DUF881)
APDLHJFM_00276 6.7e-75 garA T Inner membrane component of T3SS, cytoplasmic domain
APDLHJFM_00277 2.6e-112 K helix_turn_helix, mercury resistance
APDLHJFM_00278 3.8e-64
APDLHJFM_00279 7.6e-35
APDLHJFM_00280 5.7e-140 pgp 3.1.3.18 S HAD-hyrolase-like
APDLHJFM_00281 5.1e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
APDLHJFM_00282 0.0 helY L DEAD DEAH box helicase
APDLHJFM_00283 6.8e-53
APDLHJFM_00284 0.0 pafB K WYL domain
APDLHJFM_00285 3e-292 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
APDLHJFM_00286 1.4e-161 supH S Sucrose-6F-phosphate phosphohydrolase
APDLHJFM_00288 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
APDLHJFM_00289 1.2e-143 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
APDLHJFM_00290 8.5e-120 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
APDLHJFM_00291 1.1e-25
APDLHJFM_00292 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
APDLHJFM_00293 5.1e-235
APDLHJFM_00294 1.1e-164 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
APDLHJFM_00295 3.1e-223 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
APDLHJFM_00296 2.3e-99 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
APDLHJFM_00297 3.6e-52 yajC U Preprotein translocase subunit
APDLHJFM_00298 1.4e-198 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
APDLHJFM_00299 3.2e-107 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
APDLHJFM_00300 2.7e-100 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
APDLHJFM_00301 2e-111 yebC K transcriptional regulatory protein
APDLHJFM_00302 2.2e-110 hit 2.7.7.53 FG HIT domain
APDLHJFM_00303 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
APDLHJFM_00309 1.2e-133 S PAC2 family
APDLHJFM_00310 1.8e-156 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
APDLHJFM_00311 9.6e-157 G Fructosamine kinase
APDLHJFM_00312 2.6e-211 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
APDLHJFM_00313 8.3e-191 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
APDLHJFM_00314 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
APDLHJFM_00315 3.6e-202 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
APDLHJFM_00316 1.9e-240 brnQ U Component of the transport system for branched-chain amino acids
APDLHJFM_00317 2.9e-189
APDLHJFM_00318 3.6e-301 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
APDLHJFM_00319 2.9e-159 S Sucrose-6F-phosphate phosphohydrolase
APDLHJFM_00320 1.9e-175 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
APDLHJFM_00321 2.5e-34 secG U Preprotein translocase SecG subunit
APDLHJFM_00322 3.5e-146 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
APDLHJFM_00323 7.9e-219 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
APDLHJFM_00324 3.5e-169 whiA K May be required for sporulation
APDLHJFM_00325 5.4e-178 rapZ S Displays ATPase and GTPase activities
APDLHJFM_00326 5.6e-191 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
APDLHJFM_00327 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
APDLHJFM_00328 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
APDLHJFM_00329 1.1e-233 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
APDLHJFM_00330 2.6e-33 XK26_04485 P Cobalt transport protein
APDLHJFM_00331 2.1e-50 XK26_04485 P Cobalt transport protein
APDLHJFM_00332 2.3e-130 P ABC transporter
APDLHJFM_00333 1.4e-130 S Enoyl-(Acyl carrier protein) reductase
APDLHJFM_00334 3.7e-301 ybiT S ABC transporter
APDLHJFM_00335 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
APDLHJFM_00336 9.4e-123 3.8.1.2 S Haloacid dehalogenase-like hydrolase
APDLHJFM_00337 9.4e-172 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
APDLHJFM_00338 1.4e-217 MA20_36090 S Psort location Cytoplasmic, score 8.87
APDLHJFM_00339 4.6e-28
APDLHJFM_00340 5e-125 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
APDLHJFM_00341 6.2e-182 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
APDLHJFM_00342 6.9e-158 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
APDLHJFM_00343 9.4e-175 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
APDLHJFM_00344 7.4e-291 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
APDLHJFM_00345 7e-74 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
APDLHJFM_00346 8.3e-179 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
APDLHJFM_00347 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
APDLHJFM_00348 1.7e-187 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
APDLHJFM_00349 9.7e-163 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
APDLHJFM_00350 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
APDLHJFM_00352 1.3e-99 sixA 3.6.1.55 T Phosphoglycerate mutase family
APDLHJFM_00353 4.5e-202 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
APDLHJFM_00354 1.3e-133 S Phospholipase/Carboxylesterase
APDLHJFM_00356 2e-140 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
APDLHJFM_00357 1.9e-146 S phosphoesterase or phosphohydrolase
APDLHJFM_00358 9.1e-92 S Appr-1'-p processing enzyme
APDLHJFM_00359 1.4e-178 I alpha/beta hydrolase fold
APDLHJFM_00361 2.5e-129
APDLHJFM_00362 1.7e-127 S Plasmid pRiA4b ORF-3-like protein
APDLHJFM_00363 2e-31 rarD S EamA-like transporter family
APDLHJFM_00365 1.8e-26 S Polyketide cyclase / dehydrase and lipid transport
APDLHJFM_00366 1.8e-59 K Helix-turn-helix XRE-family like proteins
APDLHJFM_00368 1e-153 ymdC 2.7.1.87, 2.7.1.95 J Phosphotransferase enzyme family
APDLHJFM_00370 7.9e-54 ksgA 2.1.1.182, 2.1.1.184 J Ribosomal RNA adenine dimethylase
APDLHJFM_00371 1.3e-15
APDLHJFM_00372 6.4e-51
APDLHJFM_00373 2.1e-70 S Helix-turn-helix
APDLHJFM_00374 8.2e-105 3.1.3.27 E haloacid dehalogenase-like hydrolase
APDLHJFM_00375 2.3e-161 3.1.3.73 G Phosphoglycerate mutase family
APDLHJFM_00376 1.7e-235 rutG F Permease family
APDLHJFM_00377 6e-304 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
APDLHJFM_00378 3.2e-250 nplT G Alpha amylase, catalytic domain
APDLHJFM_00379 2.8e-188 pit P Phosphate transporter family
APDLHJFM_00380 3e-113 MA20_27875 P Protein of unknown function DUF47
APDLHJFM_00381 4.1e-113 K helix_turn_helix, Lux Regulon
APDLHJFM_00382 3e-243 T Histidine kinase
APDLHJFM_00383 6.6e-120 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
APDLHJFM_00384 4.2e-186 V ATPases associated with a variety of cellular activities
APDLHJFM_00385 7.5e-225 V ABC-2 family transporter protein
APDLHJFM_00386 1.1e-251 V ABC-2 family transporter protein
APDLHJFM_00387 4.5e-285 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
APDLHJFM_00388 3.2e-112 E GDSL-like Lipase/Acylhydrolase family
APDLHJFM_00389 1.9e-196
APDLHJFM_00390 9.1e-110 3.4.13.21 E Peptidase family S51
APDLHJFM_00391 2.3e-105 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
APDLHJFM_00392 3.1e-162 M pfam nlp p60
APDLHJFM_00393 2e-154 I Serine aminopeptidase, S33
APDLHJFM_00394 1.7e-18 yozG K Cro/C1-type HTH DNA-binding domain
APDLHJFM_00395 1.2e-54 S Protein of unknown function (DUF2975)
APDLHJFM_00396 1.1e-240 pbuX F Permease family
APDLHJFM_00397 9.7e-106 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
APDLHJFM_00398 0.0 pcrA 3.6.4.12 L DNA helicase
APDLHJFM_00399 1.3e-61 S Domain of unknown function (DUF4418)
APDLHJFM_00400 1.5e-217 V FtsX-like permease family
APDLHJFM_00401 2.4e-151 lolD V ABC transporter
APDLHJFM_00402 1.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
APDLHJFM_00403 2e-151 S Peptidase C26
APDLHJFM_00404 4e-72 3.5.4.5 F cytidine deaminase activity
APDLHJFM_00405 1.8e-46 sdpI S SdpI/YhfL protein family
APDLHJFM_00406 2.7e-111 E Transglutaminase-like superfamily
APDLHJFM_00407 1.7e-65 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
APDLHJFM_00408 8.8e-47 relB L RelB antitoxin
APDLHJFM_00409 1.9e-129 pgm3 G Phosphoglycerate mutase family
APDLHJFM_00410 2.3e-55 WQ51_05790 S Bacterial protein of unknown function (DUF948)
APDLHJFM_00411 1.6e-35
APDLHJFM_00412 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
APDLHJFM_00413 2.7e-71 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
APDLHJFM_00414 1.1e-193 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
APDLHJFM_00415 5.3e-70 3.4.23.43 S Type IV leader peptidase family
APDLHJFM_00416 4.3e-217 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
APDLHJFM_00417 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
APDLHJFM_00418 3.5e-79 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
APDLHJFM_00419 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
APDLHJFM_00420 0.0 S L,D-transpeptidase catalytic domain
APDLHJFM_00421 1.5e-291 sufB O FeS assembly protein SufB
APDLHJFM_00422 4.3e-236 sufD O FeS assembly protein SufD
APDLHJFM_00423 7e-144 sufC O FeS assembly ATPase SufC
APDLHJFM_00424 1.1e-239 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
APDLHJFM_00425 8.1e-102 iscU C SUF system FeS assembly protein, NifU family
APDLHJFM_00426 3.2e-109 yitW S Iron-sulfur cluster assembly protein
APDLHJFM_00427 6.2e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
APDLHJFM_00428 3.6e-165 spoU 2.1.1.185 J SpoU rRNA Methylase family
APDLHJFM_00430 3e-134 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
APDLHJFM_00431 4.4e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
APDLHJFM_00432 2.6e-214 phoH T PhoH-like protein
APDLHJFM_00433 1.8e-101 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
APDLHJFM_00434 4.3e-248 corC S CBS domain
APDLHJFM_00435 8.1e-185 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
APDLHJFM_00436 0.0 fadD 6.2.1.3 I AMP-binding enzyme
APDLHJFM_00437 4.8e-205 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
APDLHJFM_00438 2.1e-43 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
APDLHJFM_00439 1.5e-232 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
APDLHJFM_00440 5.4e-234 yhjX EGP Major facilitator Superfamily
APDLHJFM_00441 1.7e-103 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
APDLHJFM_00442 1.6e-226 ilvE 2.6.1.42 E Amino-transferase class IV
APDLHJFM_00443 8.8e-143 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
APDLHJFM_00444 5.3e-136 S UPF0126 domain
APDLHJFM_00445 5.8e-34 rpsT J Binds directly to 16S ribosomal RNA
APDLHJFM_00446 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
APDLHJFM_00447 7.4e-255 hemN H Involved in the biosynthesis of porphyrin-containing compound
APDLHJFM_00449 1e-190 K helix_turn _helix lactose operon repressor
APDLHJFM_00450 2.2e-67 K helix_turn _helix lactose operon repressor
APDLHJFM_00451 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
APDLHJFM_00452 7.2e-302 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
APDLHJFM_00453 0.0 E ABC transporter, substrate-binding protein, family 5
APDLHJFM_00454 0.0 S Glycosyl hydrolases related to GH101 family, GH129
APDLHJFM_00455 3e-81
APDLHJFM_00456 2.5e-244 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
APDLHJFM_00457 2.4e-158 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
APDLHJFM_00458 2e-160 S Sucrose-6F-phosphate phosphohydrolase
APDLHJFM_00459 2.3e-93 bcp 1.11.1.15 O Redoxin
APDLHJFM_00460 1.7e-140
APDLHJFM_00464 7.8e-137 yfbU S YfbU domain
APDLHJFM_00465 1.1e-63 K Helix-turn-helix XRE-family like proteins
APDLHJFM_00466 1.1e-300 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
APDLHJFM_00467 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
APDLHJFM_00468 1.3e-262 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
APDLHJFM_00469 2.5e-65 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
APDLHJFM_00470 5.9e-134 3.1.3.85 G Phosphoglycerate mutase family
APDLHJFM_00473 3.7e-154 S Sucrose-6F-phosphate phosphohydrolase
APDLHJFM_00474 2.7e-177 metQ P NLPA lipoprotein
APDLHJFM_00475 1.6e-219 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
APDLHJFM_00476 7.4e-113 metI P Binding-protein-dependent transport system inner membrane component
APDLHJFM_00477 3.7e-226 S Peptidase dimerisation domain
APDLHJFM_00478 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
APDLHJFM_00479 2.6e-38
APDLHJFM_00480 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
APDLHJFM_00481 8.7e-175 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
APDLHJFM_00482 9.8e-120 S Protein of unknown function (DUF3000)
APDLHJFM_00483 9.9e-252 rnd 3.1.13.5 J 3'-5' exonuclease
APDLHJFM_00484 4.4e-234 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
APDLHJFM_00485 8.5e-241 clcA_2 P Voltage gated chloride channel
APDLHJFM_00486 8.9e-60
APDLHJFM_00487 6.5e-116 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
APDLHJFM_00488 4.3e-121 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
APDLHJFM_00489 2.1e-252 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
APDLHJFM_00492 3.3e-241 patB 4.4.1.8 E Aminotransferase, class I II
APDLHJFM_00493 1.1e-237 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
APDLHJFM_00494 1.6e-168 fmt2 3.2.2.10 S Belongs to the LOG family
APDLHJFM_00495 1.9e-113 safC S O-methyltransferase
APDLHJFM_00496 4.2e-183 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
APDLHJFM_00497 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
APDLHJFM_00498 0.0 dprA 5.99.1.2 LU DNA recombination-mediator protein A
APDLHJFM_00499 2e-291 comM O Magnesium chelatase, subunit ChlI C-terminal
APDLHJFM_00500 3.7e-75 yraN L Belongs to the UPF0102 family
APDLHJFM_00501 1.6e-23 L Transposase and inactivated derivatives IS30 family
APDLHJFM_00502 2.8e-165 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
APDLHJFM_00503 4.5e-252 metY 2.5.1.49 E Aminotransferase class-V
APDLHJFM_00504 9.8e-169 V ABC transporter, ATP-binding protein
APDLHJFM_00505 0.0 MV MacB-like periplasmic core domain
APDLHJFM_00506 3.8e-140 K helix_turn_helix, Lux Regulon
APDLHJFM_00507 0.0 tcsS2 T Histidine kinase
APDLHJFM_00508 9.1e-294 pip 3.4.11.5 S alpha/beta hydrolase fold
APDLHJFM_00509 1.4e-147 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
APDLHJFM_00510 3.1e-153 cjaA ET Bacterial periplasmic substrate-binding proteins
APDLHJFM_00511 1.2e-138 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
APDLHJFM_00512 7.8e-118 E Binding-protein-dependent transport system inner membrane component
APDLHJFM_00513 1.5e-110 papP E Binding-protein-dependent transport system inner membrane component
APDLHJFM_00514 1.7e-203 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
APDLHJFM_00515 1.4e-164 K Arac family
APDLHJFM_00516 2.7e-28 S rRNA binding
APDLHJFM_00518 2.7e-247 V MatE
APDLHJFM_00519 0.0 drrC L ABC transporter
APDLHJFM_00520 1.6e-14 2.7.7.7 L Transposase, Mutator family
APDLHJFM_00521 9.1e-234 XK27_00240 K Fic/DOC family
APDLHJFM_00522 3.1e-60 yccF S Inner membrane component domain
APDLHJFM_00523 2.3e-159 ksgA 2.1.1.182 J Methyltransferase domain
APDLHJFM_00524 2.5e-67 S Cupin 2, conserved barrel domain protein
APDLHJFM_00525 1.5e-52 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
APDLHJFM_00526 1.1e-37 L RelB antitoxin
APDLHJFM_00527 4.8e-243 S HipA-like C-terminal domain
APDLHJFM_00528 5.6e-18 higA K Helix-turn-helix
APDLHJFM_00529 8.9e-221 G Transmembrane secretion effector
APDLHJFM_00530 1.2e-118 K Bacterial regulatory proteins, tetR family
APDLHJFM_00531 5.9e-12
APDLHJFM_00532 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
APDLHJFM_00533 6e-261 EGP Transmembrane secretion effector
APDLHJFM_00534 8.1e-278 KLT Protein tyrosine kinase
APDLHJFM_00535 4.2e-77 K Psort location Cytoplasmic, score
APDLHJFM_00536 1.7e-218
APDLHJFM_00537 1.2e-38
APDLHJFM_00538 5.3e-37 L Integrase core domain
APDLHJFM_00539 5.7e-78 L IstB-like ATP binding protein
APDLHJFM_00540 2.2e-284 L PFAM Integrase catalytic
APDLHJFM_00541 5.4e-97
APDLHJFM_00542 2.9e-101
APDLHJFM_00543 9.6e-95
APDLHJFM_00544 1.1e-82 U Relaxase/Mobilisation nuclease domain
APDLHJFM_00545 1.5e-18 L Transposase
APDLHJFM_00546 1.3e-31 L PFAM Integrase catalytic
APDLHJFM_00547 8.5e-44 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
APDLHJFM_00548 2e-31 relB L RelB antitoxin
APDLHJFM_00549 4.4e-280 argH 4.3.2.1 E argininosuccinate lyase
APDLHJFM_00550 1.2e-28 thiS 2.8.1.10 H ThiS family
APDLHJFM_00551 1.8e-156 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
APDLHJFM_00552 4.6e-146 moeB 2.7.7.80 H ThiF family
APDLHJFM_00553 3.3e-64 M1-798 P Rhodanese Homology Domain
APDLHJFM_00554 4.6e-102 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
APDLHJFM_00555 3.9e-139 S Putative ABC-transporter type IV
APDLHJFM_00556 9.1e-82 S Protein of unknown function (DUF975)
APDLHJFM_00557 2.6e-255 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
APDLHJFM_00558 1.1e-160 L Tetratricopeptide repeat
APDLHJFM_00559 3.9e-198 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
APDLHJFM_00561 6.7e-139 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
APDLHJFM_00562 3.4e-94
APDLHJFM_00563 4e-69 trkA P TrkA-N domain
APDLHJFM_00564 8.3e-12 trkB P Cation transport protein
APDLHJFM_00565 1.9e-183 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
APDLHJFM_00566 0.0 recN L May be involved in recombinational repair of damaged DNA
APDLHJFM_00567 6.9e-121 S Haloacid dehalogenase-like hydrolase
APDLHJFM_00568 6e-13 J Acetyltransferase (GNAT) domain
APDLHJFM_00569 2.3e-18 J Acetyltransferase (GNAT) domain
APDLHJFM_00570 4.8e-58 K helix_turn_helix gluconate operon transcriptional repressor
APDLHJFM_00571 1.1e-172 V ATPases associated with a variety of cellular activities
APDLHJFM_00572 4.5e-121 S ABC-2 family transporter protein
APDLHJFM_00573 9.7e-108
APDLHJFM_00574 2.2e-09 S Psort location Cytoplasmic, score
APDLHJFM_00575 4.7e-282 thrC 4.2.3.1 E Threonine synthase N terminus
APDLHJFM_00576 2e-236 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
APDLHJFM_00577 3e-96
APDLHJFM_00578 3.2e-138 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
APDLHJFM_00579 3.7e-91 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
APDLHJFM_00580 1.4e-17 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
APDLHJFM_00581 0.0 S Uncharacterised protein family (UPF0182)
APDLHJFM_00582 4.1e-93 2.3.1.183 M Acetyltransferase (GNAT) domain
APDLHJFM_00583 1.5e-114 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
APDLHJFM_00584 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
APDLHJFM_00585 2.1e-179 1.1.1.65 C Aldo/keto reductase family
APDLHJFM_00586 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
APDLHJFM_00587 6.6e-70 divIC D Septum formation initiator
APDLHJFM_00588 1.3e-102 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
APDLHJFM_00589 1.3e-182 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
APDLHJFM_00591 6.2e-125 L HTH-like domain
APDLHJFM_00592 6.1e-94 L Transposase
APDLHJFM_00594 3.9e-86 pin L Resolvase, N terminal domain
APDLHJFM_00595 3.3e-210 G Bacterial extracellular solute-binding protein
APDLHJFM_00596 3.3e-126 P Binding-protein-dependent transport system inner membrane component
APDLHJFM_00597 2e-128 P Binding-protein-dependent transport systems inner membrane component
APDLHJFM_00598 5.7e-258 M Protein of unknown function (DUF2961)
APDLHJFM_00599 3.9e-236 bfrA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
APDLHJFM_00600 1.5e-146 K helix_turn _helix lactose operon repressor
APDLHJFM_00601 2.7e-43 L PFAM Integrase catalytic
APDLHJFM_00602 2e-133 L PFAM Integrase catalytic
APDLHJFM_00604 5.5e-122 XK27_00240 K Fic/DOC family
APDLHJFM_00605 2.3e-54
APDLHJFM_00607 5.7e-13
APDLHJFM_00608 1.3e-09 S Predicted membrane protein (DUF2335)
APDLHJFM_00610 5.4e-67 int8 L Phage integrase family
APDLHJFM_00611 1.3e-15 int8 L Phage integrase family
APDLHJFM_00612 6e-08 int8 L Phage integrase family
APDLHJFM_00613 2.9e-94
APDLHJFM_00614 2.3e-281 sdaA 4.3.1.17 E Serine dehydratase alpha chain
APDLHJFM_00615 1.4e-74 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
APDLHJFM_00616 4.4e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
APDLHJFM_00617 7e-146 yplQ S Haemolysin-III related
APDLHJFM_00618 7.5e-280 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
APDLHJFM_00619 4.9e-47 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
APDLHJFM_00620 0.0 D FtsK/SpoIIIE family
APDLHJFM_00621 6.5e-206 K Cell envelope-related transcriptional attenuator domain
APDLHJFM_00622 1.8e-55 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
APDLHJFM_00623 0.0 S Glycosyl transferase, family 2
APDLHJFM_00624 3e-263
APDLHJFM_00625 6.3e-78 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
APDLHJFM_00626 2.2e-148 cof 5.2.1.8 T Eukaryotic phosphomannomutase
APDLHJFM_00627 6.5e-122 ctsW S Phosphoribosyl transferase domain
APDLHJFM_00628 4.4e-197 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
APDLHJFM_00629 2.9e-128 T Response regulator receiver domain protein
APDLHJFM_00630 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
APDLHJFM_00631 2.1e-100 carD K CarD-like/TRCF domain
APDLHJFM_00632 5.2e-87 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
APDLHJFM_00633 7.5e-136 znuB U ABC 3 transport family
APDLHJFM_00634 1.9e-161 znuC P ATPases associated with a variety of cellular activities
APDLHJFM_00635 1.6e-184 P Zinc-uptake complex component A periplasmic
APDLHJFM_00636 5.8e-163 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
APDLHJFM_00637 3.2e-254 rpsA J Ribosomal protein S1
APDLHJFM_00638 1.9e-107 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
APDLHJFM_00639 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
APDLHJFM_00640 1e-176 terC P Integral membrane protein, TerC family
APDLHJFM_00641 2.7e-274 pyk 2.7.1.40 G Pyruvate kinase
APDLHJFM_00642 1.1e-109 aspA 3.6.1.13 L NUDIX domain
APDLHJFM_00644 2.8e-124 pdtaR T Response regulator receiver domain protein
APDLHJFM_00645 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
APDLHJFM_00646 5.1e-178 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
APDLHJFM_00647 8.8e-127 3.6.1.13 L NUDIX domain
APDLHJFM_00648 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
APDLHJFM_00649 3.4e-26 zntR K bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
APDLHJFM_00650 4.8e-90 K Putative zinc ribbon domain
APDLHJFM_00651 2.1e-125 S GyrI-like small molecule binding domain
APDLHJFM_00652 1.2e-20 tag 3.2.2.20 L Methyladenine glycosylase
APDLHJFM_00654 2.5e-121
APDLHJFM_00655 8.2e-213 ykiI
APDLHJFM_00656 1.3e-251 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
APDLHJFM_00657 1.7e-232 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
APDLHJFM_00658 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
APDLHJFM_00660 3.2e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
APDLHJFM_00661 0.0 XK27_09800 I Psort location CytoplasmicMembrane, score 9.99
APDLHJFM_00662 2.6e-33
APDLHJFM_00664 4.7e-25 KL Type III restriction enzyme res subunit
APDLHJFM_00665 0.0 KL Type III restriction enzyme res subunit
APDLHJFM_00666 1.5e-18
APDLHJFM_00667 8e-37 L Psort location Cytoplasmic, score 8.87
APDLHJFM_00668 0.0 T Diguanylate cyclase, GGDEF domain
APDLHJFM_00669 7.1e-136 ybbM V Uncharacterised protein family (UPF0014)
APDLHJFM_00670 4.2e-127 ybbL V ATPases associated with a variety of cellular activities
APDLHJFM_00671 3.9e-104 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
APDLHJFM_00672 1.1e-92 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
APDLHJFM_00673 2e-241 carA 6.3.5.5 F Belongs to the CarA family
APDLHJFM_00674 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
APDLHJFM_00675 6.7e-170 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
APDLHJFM_00676 1.4e-104 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
APDLHJFM_00677 8.3e-136 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
APDLHJFM_00679 0.0 tetP J Elongation factor G, domain IV
APDLHJFM_00680 2.7e-126 ypfH S Phospholipase/Carboxylesterase
APDLHJFM_00681 4e-234 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
APDLHJFM_00682 2.5e-42 XAC3035 O Glutaredoxin
APDLHJFM_00683 4.6e-176 S Domain of unknown function (DUF4143)
APDLHJFM_00684 2.7e-08 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
APDLHJFM_00685 7.2e-116 XK27_08050 O prohibitin homologues
APDLHJFM_00686 1.1e-58 S Domain of unknown function (DUF4143)
APDLHJFM_00687 2.9e-159 S Patatin-like phospholipase
APDLHJFM_00688 1.5e-149 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
APDLHJFM_00689 2.7e-171 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
APDLHJFM_00690 3.8e-128 S Vitamin K epoxide reductase
APDLHJFM_00691 5.5e-169 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
APDLHJFM_00692 4.7e-32 S Protein of unknown function (DUF3107)
APDLHJFM_00693 7.2e-300 mphA S Aminoglycoside phosphotransferase
APDLHJFM_00694 2.9e-290 uvrD2 3.6.4.12 L DNA helicase
APDLHJFM_00695 6.1e-297 S Zincin-like metallopeptidase
APDLHJFM_00696 1.5e-156 lon T Belongs to the peptidase S16 family
APDLHJFM_00697 1.6e-73 S Protein of unknown function (DUF3052)
APDLHJFM_00699 7.5e-209 2.7.11.1 NU Tfp pilus assembly protein FimV
APDLHJFM_00700 4.1e-220 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
APDLHJFM_00701 5.3e-231 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
APDLHJFM_00702 0.0 I acetylesterase activity
APDLHJFM_00703 2.5e-127 recO L Involved in DNA repair and RecF pathway recombination
APDLHJFM_00704 3.1e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
APDLHJFM_00705 4.5e-135 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
APDLHJFM_00706 5.2e-190 P NMT1/THI5 like
APDLHJFM_00707 5.8e-222 E Aminotransferase class I and II
APDLHJFM_00708 3.3e-141 bioM P ATPases associated with a variety of cellular activities
APDLHJFM_00710 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
APDLHJFM_00711 0.0 S Tetratricopeptide repeat
APDLHJFM_00712 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
APDLHJFM_00713 6e-205 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
APDLHJFM_00714 2.3e-281 glnA 6.3.1.2 E glutamine synthetase
APDLHJFM_00715 9.2e-144 S Domain of unknown function (DUF4191)
APDLHJFM_00716 1.4e-278 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
APDLHJFM_00717 6.9e-102 S Protein of unknown function (DUF3043)
APDLHJFM_00718 2.7e-260 argE E Peptidase dimerisation domain
APDLHJFM_00719 6.2e-108 ykoE S ABC-type cobalt transport system, permease component
APDLHJFM_00720 3.4e-280 ykoD P ATPases associated with a variety of cellular activities
APDLHJFM_00721 1.2e-158 cbiQ P Cobalt transport protein
APDLHJFM_00722 8e-160 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
APDLHJFM_00723 7.7e-202 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
APDLHJFM_00724 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
APDLHJFM_00725 1.4e-89
APDLHJFM_00726 3e-201 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
APDLHJFM_00727 3.7e-213 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
APDLHJFM_00728 1.1e-178 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
APDLHJFM_00729 1.3e-248 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
APDLHJFM_00730 3.9e-184 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
APDLHJFM_00731 5.9e-83 argR K Regulates arginine biosynthesis genes
APDLHJFM_00732 2e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
APDLHJFM_00733 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
APDLHJFM_00734 1.7e-259 G Bacterial extracellular solute-binding protein
APDLHJFM_00735 5.7e-277 G Bacterial extracellular solute-binding protein
APDLHJFM_00736 6.9e-144 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
APDLHJFM_00737 3.4e-289 E ABC transporter, substrate-binding protein, family 5
APDLHJFM_00738 2.5e-167 P Binding-protein-dependent transport system inner membrane component
APDLHJFM_00739 2.4e-149 EP Binding-protein-dependent transport system inner membrane component
APDLHJFM_00740 6.5e-137 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
APDLHJFM_00741 2e-138 sapF E ATPases associated with a variety of cellular activities
APDLHJFM_00742 9.7e-194 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
APDLHJFM_00743 4.5e-219 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
APDLHJFM_00744 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
APDLHJFM_00745 8e-93 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
APDLHJFM_00746 6.5e-104 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
APDLHJFM_00747 5.7e-272 yhdG E aromatic amino acid transport protein AroP K03293
APDLHJFM_00748 4.5e-263 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
APDLHJFM_00749 1.2e-244 dgt 3.1.5.1 F Phosphohydrolase-associated domain
APDLHJFM_00750 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
APDLHJFM_00751 2.1e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
APDLHJFM_00752 1.1e-115 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
APDLHJFM_00753 9.1e-297 EK Alanine-glyoxylate amino-transferase
APDLHJFM_00754 6.5e-210 ybiR P Citrate transporter
APDLHJFM_00755 3.3e-30
APDLHJFM_00756 7e-43 G Alpha-L-arabinofuranosidase C-terminal domain
APDLHJFM_00757 3e-159 K Helix-turn-helix domain, rpiR family
APDLHJFM_00760 3.6e-257 G Bacterial extracellular solute-binding protein
APDLHJFM_00761 9.9e-225 K helix_turn _helix lactose operon repressor
APDLHJFM_00762 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
APDLHJFM_00763 4.5e-13 L Psort location Cytoplasmic, score 8.87
APDLHJFM_00764 0.0 E ABC transporter, substrate-binding protein, family 5
APDLHJFM_00765 2.1e-85 msrA 1.8.4.11, 1.8.4.12 O peptide-methionine (S)-S-oxide reductase activity
APDLHJFM_00766 5.3e-134 V ATPases associated with a variety of cellular activities
APDLHJFM_00767 8e-177 M Conserved repeat domain
APDLHJFM_00768 5.6e-278 macB_8 V MacB-like periplasmic core domain
APDLHJFM_00769 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
APDLHJFM_00770 4.8e-182 adh3 C Zinc-binding dehydrogenase
APDLHJFM_00771 4.3e-86 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
APDLHJFM_00772 4.2e-225 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
APDLHJFM_00773 1.2e-68 zur P Belongs to the Fur family
APDLHJFM_00774 5.7e-84 ylbB V FtsX-like permease family
APDLHJFM_00775 2.9e-27 ylbB V FtsX-like permease family
APDLHJFM_00776 4e-70 XK27_06785 V ABC transporter
APDLHJFM_00777 6.1e-35
APDLHJFM_00778 8.7e-27 zur P Ferric uptake regulator family
APDLHJFM_00779 7.8e-140 S TIGRFAM TIGR03943 family protein
APDLHJFM_00780 1.8e-169 ycgR S Predicted permease
APDLHJFM_00781 2.3e-25 adcA P ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
APDLHJFM_00782 1.3e-18 J Ribosomal L32p protein family
APDLHJFM_00783 1.1e-14 rpmJ J Ribosomal protein L36
APDLHJFM_00784 4.4e-34 rpmE2 J Ribosomal protein L31
APDLHJFM_00785 2.5e-44 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
APDLHJFM_00786 3.1e-20 rpmG J Ribosomal protein L33
APDLHJFM_00787 3.9e-29 rpmB J Ribosomal L28 family
APDLHJFM_00788 2.6e-98 S cobalamin synthesis protein
APDLHJFM_00789 2.1e-155 P Zinc-uptake complex component A periplasmic
APDLHJFM_00790 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
APDLHJFM_00791 9.9e-299 aldH 1.2.1.3, 1.2.1.5 C Aldehyde dehydrogenase family
APDLHJFM_00792 6.3e-243 purD 6.3.4.13 F Belongs to the GARS family
APDLHJFM_00793 9.2e-184 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
APDLHJFM_00794 2.7e-293 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
APDLHJFM_00795 5.5e-300 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
APDLHJFM_00796 2.3e-31
APDLHJFM_00797 1.5e-13 C Aldo/keto reductase family
APDLHJFM_00798 4.7e-102 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
APDLHJFM_00799 1.3e-109 Q D-alanine [D-alanyl carrier protein] ligase activity
APDLHJFM_00800 1.8e-251 Q D-alanine [D-alanyl carrier protein] ligase activity
APDLHJFM_00801 6.8e-104 I alpha/beta hydrolase fold
APDLHJFM_00802 1e-84 I alpha/beta hydrolase fold
APDLHJFM_00803 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
APDLHJFM_00804 9.5e-138 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
APDLHJFM_00805 2.3e-224 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
APDLHJFM_00806 1e-229 mtnE 2.6.1.83 E Aminotransferase class I and II
APDLHJFM_00807 5.2e-220 M Glycosyl transferase 4-like domain
APDLHJFM_00808 2.1e-196 ltaE 4.1.2.48 E Beta-eliminating lyase
APDLHJFM_00810 1.1e-192 yocS S SBF-like CPA transporter family (DUF4137)
APDLHJFM_00811 9.3e-62 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
APDLHJFM_00812 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
APDLHJFM_00813 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
APDLHJFM_00814 6.2e-232 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
APDLHJFM_00815 3.5e-129 tmp1 S Domain of unknown function (DUF4391)
APDLHJFM_00816 7.8e-146 rlrG K Bacterial regulatory helix-turn-helix protein, lysR family
APDLHJFM_00817 4.5e-186 MA20_14895 S Conserved hypothetical protein 698
APDLHJFM_00818 5e-30 S Psort location CytoplasmicMembrane, score
APDLHJFM_00819 3.6e-58 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
APDLHJFM_00820 1.6e-86 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
APDLHJFM_00821 4.4e-68 K MerR family regulatory protein
APDLHJFM_00822 1.1e-195 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
APDLHJFM_00823 2.6e-258 S Domain of unknown function (DUF4143)
APDLHJFM_00824 3.4e-109 P Protein of unknown function DUF47
APDLHJFM_00825 6.4e-170 ugpQ 3.1.4.46 C Domain of unknown function
APDLHJFM_00826 2.9e-238 ugpB G Bacterial extracellular solute-binding protein
APDLHJFM_00827 8.9e-142 ugpE G Binding-protein-dependent transport system inner membrane component
APDLHJFM_00828 3.5e-164 ugpA P Binding-protein-dependent transport system inner membrane component
APDLHJFM_00829 1.5e-140 P Phosphate transporter family
APDLHJFM_00830 1.3e-190 K helix_turn _helix lactose operon repressor
APDLHJFM_00831 1.5e-144 K LysR substrate binding domain
APDLHJFM_00832 1.7e-101 K LysR substrate binding domain
APDLHJFM_00833 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
APDLHJFM_00834 1.1e-242 vbsD V MatE
APDLHJFM_00835 5.4e-124 magIII L endonuclease III
APDLHJFM_00837 5.7e-110 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
APDLHJFM_00838 6.4e-41 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
APDLHJFM_00839 4.1e-187 S Membrane transport protein
APDLHJFM_00840 6.2e-47 4.1.1.44 L Cupin 2, conserved barrel domain protein
APDLHJFM_00842 0.0 M probably involved in cell wall
APDLHJFM_00843 9.1e-253 3.2.1.14 GH18 S Carbohydrate binding domain
APDLHJFM_00844 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
APDLHJFM_00845 3.6e-142 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
APDLHJFM_00846 1.5e-186 K Periplasmic binding protein domain
APDLHJFM_00847 4.3e-42 L PFAM Integrase catalytic
APDLHJFM_00848 3.9e-07
APDLHJFM_00850 1.4e-10 L HTH-like domain
APDLHJFM_00851 5e-21 L PFAM Integrase catalytic
APDLHJFM_00852 1.4e-86
APDLHJFM_00853 6.8e-67
APDLHJFM_00854 7.6e-44 L Transposase
APDLHJFM_00855 1.4e-136 tnp7109-21 L Integrase core domain
APDLHJFM_00856 9.8e-68
APDLHJFM_00857 1.5e-80 J Nucleotidyltransferase domain
APDLHJFM_00858 2.5e-09
APDLHJFM_00860 2.5e-26 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
APDLHJFM_00862 4.9e-82 S RloB-like protein
APDLHJFM_00863 2.8e-185 S AAA domain, putative AbiEii toxin, Type IV TA system
APDLHJFM_00864 1.1e-20 S enterobacterial common antigen metabolic process
APDLHJFM_00865 2.7e-08 S enterobacterial common antigen metabolic process
APDLHJFM_00866 1.4e-08 L Transposase and inactivated derivatives IS30 family
APDLHJFM_00867 7.8e-263 S Psort location CytoplasmicMembrane, score 9.99
APDLHJFM_00868 9.2e-69
APDLHJFM_00869 1.9e-235 wcoI DM Psort location CytoplasmicMembrane, score
APDLHJFM_00870 2.3e-150
APDLHJFM_00871 1.7e-171 S G5
APDLHJFM_00872 1.9e-59 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
APDLHJFM_00873 1.6e-120 F Domain of unknown function (DUF4916)
APDLHJFM_00874 1.4e-158 mhpC I Alpha/beta hydrolase family
APDLHJFM_00875 5.7e-212 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
APDLHJFM_00876 5.9e-70 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
APDLHJFM_00877 5.5e-225 S Uncharacterized conserved protein (DUF2183)
APDLHJFM_00878 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
APDLHJFM_00879 5.4e-192 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
APDLHJFM_00880 8.4e-218 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
APDLHJFM_00881 2.1e-134 glxR K helix_turn_helix, cAMP Regulatory protein
APDLHJFM_00882 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
APDLHJFM_00883 4.1e-229 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
APDLHJFM_00884 4e-228 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
APDLHJFM_00885 2.8e-123 glpR K DeoR C terminal sensor domain
APDLHJFM_00886 6.6e-253 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
APDLHJFM_00887 2e-233 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
APDLHJFM_00888 6.4e-44 gcvR T Belongs to the UPF0237 family
APDLHJFM_00889 3.6e-252 S UPF0210 protein
APDLHJFM_00890 7.6e-115 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
APDLHJFM_00891 1.1e-186 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
APDLHJFM_00892 5.5e-101
APDLHJFM_00893 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
APDLHJFM_00894 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
APDLHJFM_00895 0.0 E Transglutaminase-like superfamily
APDLHJFM_00896 6.9e-237 S Protein of unknown function DUF58
APDLHJFM_00897 0.0 S Fibronectin type 3 domain
APDLHJFM_00898 2.3e-220 KLT Protein tyrosine kinase
APDLHJFM_00899 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
APDLHJFM_00900 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
APDLHJFM_00901 6.6e-235 G Major Facilitator Superfamily
APDLHJFM_00902 1.7e-134 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
APDLHJFM_00903 1.5e-161 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
APDLHJFM_00904 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
APDLHJFM_00905 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
APDLHJFM_00906 1.2e-258 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
APDLHJFM_00907 7.5e-123 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
APDLHJFM_00908 2.7e-266 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
APDLHJFM_00909 1.6e-205 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
APDLHJFM_00910 3.8e-205 ftsE D Cell division ATP-binding protein FtsE
APDLHJFM_00911 9.8e-161 ftsX D Part of the ABC transporter FtsEX involved in cellular division
APDLHJFM_00912 4e-147 usp 3.5.1.28 CBM50 D CHAP domain protein
APDLHJFM_00913 6.3e-79 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
APDLHJFM_00914 2.1e-142 pknD ET ABC transporter, substrate-binding protein, family 3
APDLHJFM_00915 1.7e-168 pknD ET ABC transporter, substrate-binding protein, family 3
APDLHJFM_00916 4.7e-153 yecS E Binding-protein-dependent transport system inner membrane component
APDLHJFM_00917 1.4e-150 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
APDLHJFM_00918 4.1e-144 L IstB-like ATP binding protein
APDLHJFM_00919 2.2e-295 L PFAM Integrase catalytic
APDLHJFM_00920 8.4e-44 L Transposase, Mutator family
APDLHJFM_00921 5.6e-54 S enterobacterial common antigen metabolic process
APDLHJFM_00922 1.5e-07 gumF G Fucose 4-O-acetylase and related acetyltransferases
APDLHJFM_00923 8.3e-14 pslL G Acyltransferase family
APDLHJFM_00924 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
APDLHJFM_00925 1.3e-188 K helix_turn _helix lactose operon repressor
APDLHJFM_00926 0.0 ganB 3.2.1.89 G Glycosyl hydrolase family 53
APDLHJFM_00927 3.3e-166 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
APDLHJFM_00928 2.4e-141 L Protein of unknown function (DUF1524)
APDLHJFM_00929 1e-235 mntH P H( )-stimulated, divalent metal cation uptake system
APDLHJFM_00930 9.6e-281 EGP Major facilitator Superfamily
APDLHJFM_00931 0.0 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
APDLHJFM_00932 1.6e-233 rfbP 2.7.8.6 M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
APDLHJFM_00933 2.4e-107 3.1.3.48 T Low molecular weight phosphatase family
APDLHJFM_00934 7.8e-114 S Psort location CytoplasmicMembrane, score 9.99
APDLHJFM_00936 2.3e-146 L Transposase and inactivated derivatives IS30 family
APDLHJFM_00937 1.5e-31 L Transposase and inactivated derivatives IS30 family
APDLHJFM_00938 2e-139 M Psort location Cytoplasmic, score 8.87
APDLHJFM_00939 1.7e-52 GT4 M Psort location Cytoplasmic, score 8.87
APDLHJFM_00940 1.5e-07
APDLHJFM_00941 8.9e-63 C Polysaccharide pyruvyl transferase
APDLHJFM_00942 2.9e-119 S Psort location CytoplasmicMembrane, score 9.99
APDLHJFM_00943 1.3e-46 M Glycosyltransferase like family 2
APDLHJFM_00944 2.5e-176 menD 2.2.1.9 H Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
APDLHJFM_00945 3.9e-45
APDLHJFM_00946 1e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
APDLHJFM_00947 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
APDLHJFM_00948 1e-38 V ABC transporter, ATP-binding protein
APDLHJFM_00949 4.6e-68 V ABC transporter, ATP-binding protein
APDLHJFM_00950 1e-29 macB_7 V FtsX-like permease family
APDLHJFM_00951 2.4e-88 lemA S LemA family
APDLHJFM_00952 0.0 S Predicted membrane protein (DUF2207)
APDLHJFM_00953 1.9e-10 S Predicted membrane protein (DUF2207)
APDLHJFM_00954 6.1e-202 S Predicted membrane protein (DUF2207)
APDLHJFM_00955 1.5e-19
APDLHJFM_00956 7e-169 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
APDLHJFM_00957 4.5e-202 iunH1 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
APDLHJFM_00958 2.2e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
APDLHJFM_00959 1e-34 CP_0960 S Belongs to the UPF0109 family
APDLHJFM_00960 5.6e-62 rpsP J Belongs to the bacterial ribosomal protein bS16 family
APDLHJFM_00961 1.5e-215 S Endonuclease/Exonuclease/phosphatase family
APDLHJFM_00962 6.9e-266 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
APDLHJFM_00963 2.8e-160 P Cation efflux family
APDLHJFM_00964 0.0 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
APDLHJFM_00965 5.9e-137 guaA1 6.3.5.2 F Peptidase C26
APDLHJFM_00966 0.0 yjjK S ABC transporter
APDLHJFM_00967 3.9e-72 vapC S Toxic component of a toxin-antitoxin (TA) module. An RNase
APDLHJFM_00968 3.9e-44 stbC S Plasmid stability protein
APDLHJFM_00969 9e-93 ilvN 2.2.1.6 E ACT domain
APDLHJFM_00970 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
APDLHJFM_00971 9.7e-135 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
APDLHJFM_00972 9.3e-21 rpmF J Belongs to the bacterial ribosomal protein bL32 family
APDLHJFM_00973 7.6e-117 yceD S Uncharacterized ACR, COG1399
APDLHJFM_00974 7.9e-87
APDLHJFM_00975 6e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
APDLHJFM_00976 2.4e-49 S Protein of unknown function (DUF3039)
APDLHJFM_00977 2.3e-195 yghZ C Aldo/keto reductase family
APDLHJFM_00978 2.4e-77 soxR K MerR, DNA binding
APDLHJFM_00979 3.7e-119
APDLHJFM_00980 2.8e-249 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
APDLHJFM_00981 1.1e-144 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
APDLHJFM_00982 1.3e-137 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
APDLHJFM_00983 7.3e-178 S Auxin Efflux Carrier
APDLHJFM_00986 0.0 pgi 5.3.1.9 G Belongs to the GPI family
APDLHJFM_00987 1.5e-264 abcT3 P ATPases associated with a variety of cellular activities
APDLHJFM_00988 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
APDLHJFM_00989 1.4e-59 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
APDLHJFM_00990 1e-165 lepB 3.4.21.89 U Belongs to the peptidase S26 family
APDLHJFM_00991 1e-159 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
APDLHJFM_00992 6.2e-210 K helix_turn _helix lactose operon repressor
APDLHJFM_00993 0.0 fadD 6.2.1.3 I AMP-binding enzyme
APDLHJFM_00994 2.1e-39 araE EGP Major facilitator Superfamily
APDLHJFM_00995 5.9e-21 araE EGP Major facilitator Superfamily
APDLHJFM_00996 0.0 cydD V ABC transporter transmembrane region
APDLHJFM_00997 1.6e-27 araE EGP Major facilitator Superfamily
APDLHJFM_00998 1.2e-260 G Bacterial extracellular solute-binding protein
APDLHJFM_00999 3e-41 L Transposase, Mutator family
APDLHJFM_01000 1.3e-106 K Bacterial regulatory proteins, tetR family
APDLHJFM_01001 3.4e-255 MA20_36090 S Psort location Cytoplasmic, score 8.87
APDLHJFM_01002 1.2e-85 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
APDLHJFM_01003 2e-80 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
APDLHJFM_01004 7.6e-68 ams 2.4.1.4, 3.2.1.1, 5.4.99.16 GH13 G Alpha amylase, catalytic domain
APDLHJFM_01005 1.1e-15 P Sodium/hydrogen exchanger family
APDLHJFM_01008 2.8e-81
APDLHJFM_01009 0.0 1.3.98.1, 3.2.1.21 GH3 M Conserved repeat domain
APDLHJFM_01010 8.1e-277 M LPXTG cell wall anchor motif
APDLHJFM_01012 5.7e-133 S Sulfite exporter TauE/SafE
APDLHJFM_01013 2.8e-262 aslB C Iron-sulfur cluster-binding domain
APDLHJFM_01014 3.8e-193 K helix_turn _helix lactose operon repressor
APDLHJFM_01015 6.1e-306 Z012_09690 P Domain of unknown function (DUF4976)
APDLHJFM_01016 4.1e-264 G Bacterial extracellular solute-binding protein
APDLHJFM_01017 2.9e-165 malC P Binding-protein-dependent transport system inner membrane component
APDLHJFM_01018 1.6e-177 P Binding-protein-dependent transport system inner membrane component
APDLHJFM_01019 2.2e-237 S AAA domain
APDLHJFM_01020 2.9e-15 MU outer membrane autotransporter barrel domain protein
APDLHJFM_01021 2.7e-23
APDLHJFM_01022 1.1e-76 3.2.1.20, 3.5.1.28 GH31 V N-acetylmuramoyl-L-alanine amidase
APDLHJFM_01024 5.5e-10
APDLHJFM_01026 8.1e-112
APDLHJFM_01027 6.1e-205 NT phage tail tape measure protein
APDLHJFM_01028 5.9e-18
APDLHJFM_01029 1.3e-53
APDLHJFM_01030 1.5e-58
APDLHJFM_01031 1.9e-19
APDLHJFM_01032 8e-17
APDLHJFM_01034 6.2e-131 S Caudovirus prohead serine protease
APDLHJFM_01035 1.9e-92 S Phage portal protein
APDLHJFM_01036 8.9e-124 S Terminase
APDLHJFM_01037 1.9e-15
APDLHJFM_01038 3.8e-57 L HNH endonuclease
APDLHJFM_01040 4.7e-26
APDLHJFM_01047 4.7e-207 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
APDLHJFM_01048 6.4e-148 atpB C it plays a direct role in the translocation of protons across the membrane
APDLHJFM_01049 1.7e-29 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
APDLHJFM_01050 2.9e-61 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
APDLHJFM_01051 2.4e-150 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
APDLHJFM_01052 1.3e-309 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
APDLHJFM_01053 5.5e-164 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
APDLHJFM_01054 6.1e-282 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
APDLHJFM_01055 3.6e-48 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
APDLHJFM_01056 2.6e-129 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
APDLHJFM_01057 5.5e-159 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
APDLHJFM_01058 3e-189
APDLHJFM_01059 3e-179
APDLHJFM_01060 4.5e-172 trxA2 O Tetratricopeptide repeat
APDLHJFM_01061 2.6e-117 cyaA 4.6.1.1 S CYTH
APDLHJFM_01064 3.6e-64 psp1 3.5.99.10 J Endoribonuclease L-PSP
APDLHJFM_01065 8.8e-189 plsC2 2.3.1.51 I Phosphate acyltransferases
APDLHJFM_01066 2.7e-180 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
APDLHJFM_01067 2.8e-229 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
APDLHJFM_01068 3.8e-218 P Bacterial extracellular solute-binding protein
APDLHJFM_01069 2.9e-160 U Binding-protein-dependent transport system inner membrane component
APDLHJFM_01070 6.9e-151 U Binding-protein-dependent transport system inner membrane component
APDLHJFM_01071 8.2e-238 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
APDLHJFM_01072 1.9e-184 S CAAX protease self-immunity
APDLHJFM_01073 1.7e-137 M Mechanosensitive ion channel
APDLHJFM_01074 8.6e-273 aspA 4.3.1.1 E Fumarase C C-terminus
APDLHJFM_01075 9.3e-11 L Transposase DDE domain
APDLHJFM_01076 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
APDLHJFM_01077 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
APDLHJFM_01078 2e-163 3.6.1.27 I PAP2 superfamily
APDLHJFM_01079 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
APDLHJFM_01080 5.9e-115 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
APDLHJFM_01081 2.3e-207 holB 2.7.7.7 L DNA polymerase III
APDLHJFM_01082 5.2e-105 K helix_turn _helix lactose operon repressor
APDLHJFM_01083 3.3e-37 ptsH G PTS HPr component phosphorylation site
APDLHJFM_01085 7.8e-294 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
APDLHJFM_01086 1.5e-104 S Phosphatidylethanolamine-binding protein
APDLHJFM_01087 2.2e-311 pepD E Peptidase family C69
APDLHJFM_01088 3.4e-288 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
APDLHJFM_01089 6.7e-62 S Macrophage migration inhibitory factor (MIF)
APDLHJFM_01090 8.4e-96 S GtrA-like protein
APDLHJFM_01091 1.7e-247 EGP Major facilitator Superfamily
APDLHJFM_01092 1.1e-124 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
APDLHJFM_01093 2.8e-118
APDLHJFM_01094 4.1e-228 3.1.1.31 G Lactonase, 7-bladed beta-propeller
APDLHJFM_01095 6.5e-33 S Protein of unknown function (DUF805)
APDLHJFM_01096 6.7e-110 S Protein of unknown function (DUF805)
APDLHJFM_01098 7.9e-293 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
APDLHJFM_01101 1.4e-66 L Phage integrase, N-terminal SAM-like domain
APDLHJFM_01103 3.2e-310 efeU_1 P Iron permease FTR1 family
APDLHJFM_01104 2.8e-99 tpd P Fe2+ transport protein
APDLHJFM_01105 5e-232 S Predicted membrane protein (DUF2318)
APDLHJFM_01106 1.7e-227 macB_2 V ABC transporter permease
APDLHJFM_01107 1.6e-199 Z012_06715 V FtsX-like permease family
APDLHJFM_01108 4.5e-146 macB V ABC transporter, ATP-binding protein
APDLHJFM_01109 1.7e-67 S FMN_bind
APDLHJFM_01110 3.2e-101 K Psort location Cytoplasmic, score 8.87
APDLHJFM_01111 8.1e-307 pip S YhgE Pip domain protein
APDLHJFM_01112 0.0 pip S YhgE Pip domain protein
APDLHJFM_01113 5.1e-251 S Putative ABC-transporter type IV
APDLHJFM_01114 7.4e-272 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
APDLHJFM_01115 6.6e-140 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
APDLHJFM_01116 3.7e-193 opcA G Glucose-6-phosphate dehydrogenase subunit
APDLHJFM_01117 3.5e-304 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
APDLHJFM_01118 2.2e-289 3.5.2.6 V Beta-lactamase enzyme family
APDLHJFM_01120 3.6e-301 pepD E Peptidase family C69
APDLHJFM_01121 1.1e-197 XK27_01805 M Glycosyltransferase like family 2
APDLHJFM_01122 1e-151 icaR K Bacterial regulatory proteins, tetR family
APDLHJFM_01123 5.4e-170 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
APDLHJFM_01124 1e-227 amt U Ammonium Transporter Family
APDLHJFM_01125 1e-54 glnB K Nitrogen regulatory protein P-II
APDLHJFM_01126 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
APDLHJFM_01127 1.5e-237 dinF V MatE
APDLHJFM_01128 1.2e-256 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
APDLHJFM_01129 1.9e-264 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
APDLHJFM_01130 2.4e-141 cobQ S CobB/CobQ-like glutamine amidotransferase domain
APDLHJFM_01131 4.6e-37 S granule-associated protein
APDLHJFM_01132 0.0 ubiB S ABC1 family
APDLHJFM_01133 3e-202 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
APDLHJFM_01134 1.8e-143 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
APDLHJFM_01135 1.3e-187 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
APDLHJFM_01136 4.6e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
APDLHJFM_01137 2.5e-73 ssb1 L Single-stranded DNA-binding protein
APDLHJFM_01138 2e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
APDLHJFM_01139 2.9e-70 rplI J Binds to the 23S rRNA
APDLHJFM_01142 5.3e-147 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
APDLHJFM_01143 4.1e-39 L Transposase
APDLHJFM_01144 1.1e-116
APDLHJFM_01145 4e-130 V ABC transporter
APDLHJFM_01146 1.3e-111 K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
APDLHJFM_01147 6.5e-210 2.7.13.3 T Histidine kinase
APDLHJFM_01148 1.8e-20 L Transposase
APDLHJFM_01149 2.5e-187 EGP Major Facilitator Superfamily
APDLHJFM_01150 6.2e-43
APDLHJFM_01151 8.6e-60
APDLHJFM_01152 1e-127 xerH L Belongs to the 'phage' integrase family
APDLHJFM_01153 1.9e-130 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
APDLHJFM_01154 0.0 pacS 1.9.3.1, 3.6.3.54 P E1-E2 ATPase
APDLHJFM_01155 1.3e-42 csoR S Metal-sensitive transcriptional repressor
APDLHJFM_01156 1.8e-209 rmuC S RmuC family
APDLHJFM_01157 3.7e-111 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
APDLHJFM_01158 2.4e-170 spoU 2.1.1.185 J RNA methyltransferase TrmH family
APDLHJFM_01159 2.4e-167 V ABC transporter
APDLHJFM_01160 3.7e-180
APDLHJFM_01161 6.9e-158 K Psort location Cytoplasmic, score
APDLHJFM_01162 4.1e-51 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
APDLHJFM_01163 5.1e-287 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
APDLHJFM_01164 1.3e-282 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
APDLHJFM_01165 1.1e-195 2.3.1.57 J Acetyltransferase (GNAT) domain
APDLHJFM_01166 3.3e-52 S Protein of unknown function (DUF2469)
APDLHJFM_01167 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
APDLHJFM_01168 2.7e-293 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
APDLHJFM_01169 6.2e-46 pabC 2.6.1.42, 4.1.3.38 EH Amino-transferase class IV
APDLHJFM_01170 1.7e-171 L Transposase
APDLHJFM_01171 5.1e-50 K helix_turn_helix, arabinose operon control protein
APDLHJFM_01172 2.6e-154 araN G Bacterial extracellular solute-binding protein
APDLHJFM_01173 9.5e-121 lacF P Binding-protein-dependent transport system inner membrane component
APDLHJFM_01174 1.3e-114 araQ U Binding-protein-dependent transport system inner membrane component
APDLHJFM_01175 1.4e-131 rafA 3.2.1.22 G alpha-galactosidase
APDLHJFM_01176 6.8e-63 tyrA 5.4.99.5 E Chorismate mutase type II
APDLHJFM_01177 0.0 S domain protein
APDLHJFM_01178 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
APDLHJFM_01179 5.8e-283 E Bacterial extracellular solute-binding proteins, family 5 Middle
APDLHJFM_01180 1.9e-126 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
APDLHJFM_01181 4e-139 KT Transcriptional regulatory protein, C terminal
APDLHJFM_01182 4.6e-118
APDLHJFM_01183 1.3e-97 mntP P Probably functions as a manganese efflux pump
APDLHJFM_01184 4e-92 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
APDLHJFM_01185 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
APDLHJFM_01186 0.0 K RNA polymerase II activating transcription factor binding
APDLHJFM_01187 8.1e-90 L Phage integrase family
APDLHJFM_01189 0.0 nanI 3.2.1.18 GH33 G BNR repeat-like domain
APDLHJFM_01190 6.3e-243 P Domain of unknown function (DUF4143)
APDLHJFM_01191 9e-153 K FCD
APDLHJFM_01192 8.9e-16 S Calcineurin-like phosphoesterase
APDLHJFM_01193 5.7e-216 S Calcineurin-like phosphoesterase
APDLHJFM_01194 3.1e-118 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
APDLHJFM_01195 3.3e-160 3.5.1.106 I carboxylic ester hydrolase activity
APDLHJFM_01196 7.9e-304 E Bacterial extracellular solute-binding proteins, family 5 Middle
APDLHJFM_01197 4.6e-153 oppB6 EP Binding-protein-dependent transport system inner membrane component
APDLHJFM_01198 0.0 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
APDLHJFM_01199 1.7e-148 oppF E ATPases associated with a variety of cellular activities
APDLHJFM_01200 5e-179 nanL 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
APDLHJFM_01201 3.7e-148 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
APDLHJFM_01202 4.9e-142 cobB2 K Sir2 family
APDLHJFM_01203 1.5e-231 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
APDLHJFM_01204 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
APDLHJFM_01205 2.9e-154 G Binding-protein-dependent transport system inner membrane component
APDLHJFM_01206 1.1e-143 malC G Binding-protein-dependent transport system inner membrane component
APDLHJFM_01207 2.3e-245 msmE7 G Bacterial extracellular solute-binding protein
APDLHJFM_01208 1.7e-229 nagC GK ROK family
APDLHJFM_01209 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
APDLHJFM_01210 5.8e-79 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
APDLHJFM_01211 0.0 yjcE P Sodium/hydrogen exchanger family
APDLHJFM_01212 1.2e-119 S membrane transporter protein
APDLHJFM_01213 5.6e-146 ypfH S Phospholipase/Carboxylesterase
APDLHJFM_01214 6.4e-154
APDLHJFM_01215 2.2e-110 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
APDLHJFM_01216 4.3e-35
APDLHJFM_01217 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
APDLHJFM_01218 2e-16 K helix_turn _helix lactose operon repressor
APDLHJFM_01219 7.5e-86 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
APDLHJFM_01220 1.6e-288 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
APDLHJFM_01221 3.5e-206 EGP Major facilitator Superfamily
APDLHJFM_01222 1.2e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
APDLHJFM_01223 5.9e-168 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
APDLHJFM_01224 4.2e-302 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
APDLHJFM_01225 1.6e-271 KLT Domain of unknown function (DUF4032)
APDLHJFM_01226 4.4e-155
APDLHJFM_01227 3.8e-179 3.4.22.70 M Sortase family
APDLHJFM_01228 1.1e-220 M LPXTG-motif cell wall anchor domain protein
APDLHJFM_01229 0.0 S LPXTG-motif cell wall anchor domain protein
APDLHJFM_01230 0.0 S LPXTG-motif cell wall anchor domain protein
APDLHJFM_01231 4.3e-211 ugpC E Belongs to the ABC transporter superfamily
APDLHJFM_01232 6e-137 K UTRA domain
APDLHJFM_01233 2.2e-241 ulaA 2.7.1.194 S PTS system sugar-specific permease component
APDLHJFM_01234 1.4e-44 ulaB 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
APDLHJFM_01235 3.6e-73 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
APDLHJFM_01236 1.7e-218 2.4.1.166 GT2 M Glycosyltransferase like family 2
APDLHJFM_01237 1.3e-190 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
APDLHJFM_01239 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
APDLHJFM_01240 6e-88 nrdI F Probably involved in ribonucleotide reductase function
APDLHJFM_01241 7e-43 nrdH O Glutaredoxin
APDLHJFM_01242 3e-78 3.2.1.21 GH3 G Fibronectin type III-like domain
APDLHJFM_01243 0.0 KLT Protein tyrosine kinase
APDLHJFM_01244 5.2e-136 O Thioredoxin
APDLHJFM_01246 2e-216 S G5
APDLHJFM_01247 2.2e-168 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
APDLHJFM_01248 7.2e-175 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
APDLHJFM_01249 1.8e-110 S LytR cell envelope-related transcriptional attenuator
APDLHJFM_01250 3.2e-283 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
APDLHJFM_01251 9e-165 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
APDLHJFM_01252 0.0
APDLHJFM_01253 0.0 murJ KLT MviN-like protein
APDLHJFM_01254 3.1e-176 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
APDLHJFM_01255 6.1e-222 parB K Belongs to the ParB family
APDLHJFM_01256 9.6e-175 parA D CobQ CobB MinD ParA nucleotide binding domain protein
APDLHJFM_01257 1.2e-123 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
APDLHJFM_01258 1.5e-92 jag S Putative single-stranded nucleic acids-binding domain
APDLHJFM_01259 1.4e-181 yidC U Membrane protein insertase, YidC Oxa1 family
APDLHJFM_01260 1.6e-55 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
APDLHJFM_01261 2.6e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
APDLHJFM_01262 3.3e-280 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
APDLHJFM_01263 1.9e-206 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
APDLHJFM_01264 7.1e-201 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
APDLHJFM_01265 4.2e-83 S Protein of unknown function (DUF721)
APDLHJFM_01266 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
APDLHJFM_01267 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
APDLHJFM_01268 3.2e-50 S Transmembrane domain of unknown function (DUF3566)
APDLHJFM_01269 2.6e-183 lacR K Transcriptional regulator, LacI family
APDLHJFM_01270 2.9e-16 lacS G Psort location CytoplasmicMembrane, score 10.00
APDLHJFM_01271 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
APDLHJFM_01272 2.2e-206 V VanZ like family
APDLHJFM_01273 1.9e-258 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
APDLHJFM_01274 5.3e-197 S Psort location CytoplasmicMembrane, score
APDLHJFM_01277 1.3e-122 S Protein of unknown function DUF45
APDLHJFM_01279 5.1e-256 S Domain of unknown function (DUF4143)
APDLHJFM_01280 3.3e-83 dps P Belongs to the Dps family
APDLHJFM_01281 7.2e-117 L Transposase and inactivated derivatives IS30 family
APDLHJFM_01282 1.1e-88 amyE G Bacterial extracellular solute-binding protein
APDLHJFM_01283 1e-114 S Protein of unknown function, DUF624
APDLHJFM_01284 3.8e-201 K Periplasmic binding protein domain
APDLHJFM_01285 2.1e-292 3.2.1.26 GH32 G Glycosyl hydrolases family 32
APDLHJFM_01286 5.9e-252 amyE G Bacterial extracellular solute-binding protein
APDLHJFM_01287 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
APDLHJFM_01288 3e-187 K Psort location Cytoplasmic, score
APDLHJFM_01289 4.5e-213 L Transposase and inactivated derivatives IS30 family
APDLHJFM_01290 1e-147 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
APDLHJFM_01291 4.1e-52 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
APDLHJFM_01292 7e-75 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
APDLHJFM_01293 5.8e-152 rafG G ABC transporter permease
APDLHJFM_01294 4.2e-150 malC G Binding-protein-dependent transport system inner membrane component
APDLHJFM_01295 1.5e-30 K Psort location Cytoplasmic, score
APDLHJFM_01296 6.9e-72 K Psort location Cytoplasmic, score
APDLHJFM_01297 2e-76 amyE G Bacterial extracellular solute-binding protein
APDLHJFM_01298 4.8e-116 amyE G Bacterial extracellular solute-binding protein
APDLHJFM_01300 5.9e-229 M Protein of unknown function (DUF2961)
APDLHJFM_01301 2.9e-254 amyE G Bacterial extracellular solute-binding protein
APDLHJFM_01302 8.9e-187 K Periplasmic binding protein-like domain
APDLHJFM_01303 1.5e-266 amyE G Bacterial extracellular solute-binding protein
APDLHJFM_01304 5.6e-83 dps P Belongs to the Dps family
APDLHJFM_01305 5.1e-235 ytfL P Transporter associated domain
APDLHJFM_01306 7e-209 S AAA ATPase domain
APDLHJFM_01307 5.6e-121 cah 4.2.1.1 P Reversible hydration of carbon dioxide
APDLHJFM_01308 2.9e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
APDLHJFM_01309 0.0 trxB2 1.8.1.9 C Thioredoxin domain
APDLHJFM_01310 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
APDLHJFM_01311 3.6e-163
APDLHJFM_01312 6.9e-94 S Uncharacterised protein conserved in bacteria (DUF2194)
APDLHJFM_01313 8.4e-210 S Uncharacterised protein conserved in bacteria (DUF2194)
APDLHJFM_01314 3.6e-279 pelF GT4 M Domain of unknown function (DUF3492)
APDLHJFM_01315 3.8e-282 pelG S Putative exopolysaccharide Exporter (EPS-E)
APDLHJFM_01316 0.0 cotH M CotH kinase protein
APDLHJFM_01317 4.1e-158 P VTC domain
APDLHJFM_01318 8.5e-111 S Domain of unknown function (DUF4956)
APDLHJFM_01319 0.0 yliE T Putative diguanylate phosphodiesterase
APDLHJFM_01320 2.9e-125 S AAA domain
APDLHJFM_01321 1.1e-310 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
APDLHJFM_01322 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
APDLHJFM_01323 0.0 yjjP S Threonine/Serine exporter, ThrE
APDLHJFM_01324 6.8e-298 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
APDLHJFM_01325 4.9e-166 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
APDLHJFM_01326 5.5e-300 S Amidohydrolase family
APDLHJFM_01327 5.5e-203 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
APDLHJFM_01328 1.2e-38 S Protein of unknown function (DUF3073)
APDLHJFM_01329 4.7e-112 K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
APDLHJFM_01330 1.1e-209 2.7.13.3 T Histidine kinase
APDLHJFM_01331 6.7e-222 EGP Major Facilitator Superfamily
APDLHJFM_01332 3.7e-102 I Sterol carrier protein
APDLHJFM_01333 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
APDLHJFM_01334 2.6e-35
APDLHJFM_01335 1.2e-121 gluP 3.4.21.105 S Rhomboid family
APDLHJFM_01337 7.5e-69 crgA D Involved in cell division
APDLHJFM_01338 1.8e-118 S Bacterial protein of unknown function (DUF881)
APDLHJFM_01339 3.8e-229 srtA 3.4.22.70 M Sortase family
APDLHJFM_01340 1.3e-119 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
APDLHJFM_01341 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
APDLHJFM_01342 3.9e-173 T Protein tyrosine kinase
APDLHJFM_01343 9.1e-262 pbpA M penicillin-binding protein
APDLHJFM_01344 9e-279 rodA D Belongs to the SEDS family
APDLHJFM_01345 3.7e-272 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
APDLHJFM_01346 2.1e-75 fhaB T Inner membrane component of T3SS, cytoplasmic domain
APDLHJFM_01347 2e-129 fhaA T Protein of unknown function (DUF2662)
APDLHJFM_01348 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
APDLHJFM_01349 1.3e-212 pldB 3.1.1.5 I Serine aminopeptidase, S33
APDLHJFM_01350 8.7e-87 hsp20 O Hsp20/alpha crystallin family
APDLHJFM_01351 1.2e-177 yddG EG EamA-like transporter family
APDLHJFM_01352 4.1e-23
APDLHJFM_01353 1.6e-255 S Putative esterase
APDLHJFM_01354 0.0 lysX S Uncharacterised conserved protein (DUF2156)
APDLHJFM_01355 9e-200 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
APDLHJFM_01356 5.7e-132 S Pyridoxamine 5'-phosphate oxidase
APDLHJFM_01357 5.2e-198 S Fic/DOC family
APDLHJFM_01358 4.1e-163 M Glycosyltransferase like family 2
APDLHJFM_01359 1.4e-305 KL Domain of unknown function (DUF3427)
APDLHJFM_01360 0.0 KL Domain of unknown function (DUF3427)
APDLHJFM_01361 1.8e-74 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
APDLHJFM_01362 3.5e-52 ybjQ S Putative heavy-metal-binding
APDLHJFM_01363 5.3e-145 yplQ S Haemolysin-III related
APDLHJFM_01365 1e-259 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
APDLHJFM_01366 4.1e-262 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
APDLHJFM_01367 0.0 cadA P E1-E2 ATPase
APDLHJFM_01368 3.8e-276 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
APDLHJFM_01369 1.5e-172 htpX O Belongs to the peptidase M48B family
APDLHJFM_01371 1.6e-171 yicL EG EamA-like transporter family
APDLHJFM_01372 6.1e-199 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
APDLHJFM_01373 8.9e-253 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
APDLHJFM_01374 2.2e-282 clcA P Voltage gated chloride channel
APDLHJFM_01375 1e-134 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
APDLHJFM_01376 3.3e-57 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
APDLHJFM_01377 3.2e-203 K helix_turn _helix lactose operon repressor
APDLHJFM_01379 6.1e-301 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
APDLHJFM_01380 2.3e-277 scrT G Transporter major facilitator family protein
APDLHJFM_01381 2.8e-180 K helix_turn _helix lactose operon repressor
APDLHJFM_01382 1.5e-253 yhjE EGP Sugar (and other) transporter
APDLHJFM_01383 3.4e-202 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
APDLHJFM_01384 3.7e-204 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
APDLHJFM_01385 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
APDLHJFM_01386 2.3e-187 K Psort location Cytoplasmic, score
APDLHJFM_01387 0.0 M cell wall anchor domain protein
APDLHJFM_01388 0.0 M domain protein
APDLHJFM_01389 1.6e-174 3.4.22.70 M Sortase family
APDLHJFM_01390 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
APDLHJFM_01391 0.0 malL 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
APDLHJFM_01392 7.5e-233 malE G Bacterial extracellular solute-binding protein
APDLHJFM_01393 2.7e-255 malF G Binding-protein-dependent transport system inner membrane component
APDLHJFM_01394 1.2e-166 malG G Binding-protein-dependent transport system inner membrane component
APDLHJFM_01395 1.9e-144 traX S TraX protein
APDLHJFM_01396 1.7e-15 K Psort location Cytoplasmic, score
APDLHJFM_01397 1.2e-163 K Psort location Cytoplasmic, score
APDLHJFM_01398 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 M Aamy_C
APDLHJFM_01399 0.0 dnaK O Heat shock 70 kDa protein
APDLHJFM_01400 5.2e-58 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
APDLHJFM_01401 9.4e-157 dnaJ1 O DnaJ molecular chaperone homology domain
APDLHJFM_01402 1.2e-103 hspR K transcriptional regulator, MerR family
APDLHJFM_01403 3.1e-17 F Psort location CytoplasmicMembrane, score 10.00
APDLHJFM_01404 5.1e-115 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
APDLHJFM_01405 2.1e-140 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
APDLHJFM_01406 8.8e-127 S HAD hydrolase, family IA, variant 3
APDLHJFM_01407 2.8e-134 dedA S SNARE associated Golgi protein
APDLHJFM_01408 7.6e-125 cpaE D bacterial-type flagellum organization
APDLHJFM_01409 2e-191 cpaF U Type II IV secretion system protein
APDLHJFM_01410 2.6e-74 U Type ii secretion system
APDLHJFM_01411 1.9e-114 gspF NU Type II secretion system (T2SS), protein F
APDLHJFM_01412 1.1e-41 S Protein of unknown function (DUF4244)
APDLHJFM_01413 1.4e-57 U TadE-like protein
APDLHJFM_01414 6.5e-54 S TIGRFAM helicase secretion neighborhood TadE-like protein
APDLHJFM_01415 7.6e-216 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
APDLHJFM_01416 9.3e-96 K Bacterial regulatory proteins, tetR family
APDLHJFM_01417 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
APDLHJFM_01418 8.7e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
APDLHJFM_01419 1.8e-199 3.4.22.70 M Sortase family
APDLHJFM_01420 3e-40 V Abi-like protein
APDLHJFM_01421 1e-192 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
APDLHJFM_01422 1.3e-134 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
APDLHJFM_01423 9.4e-98 askB 1.1.1.3, 2.7.2.4 E ACT domain
APDLHJFM_01424 9e-214 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
APDLHJFM_01425 9.6e-112
APDLHJFM_01426 9.3e-172 L Domain of unknown function (DUF4862)
APDLHJFM_01427 5.3e-80 2.7.1.2 GK ROK family
APDLHJFM_01428 2.8e-220 L PFAM Integrase catalytic
APDLHJFM_01429 7e-140 L Transposase, Mutator family
APDLHJFM_01430 3.2e-51 insK L Integrase core domain
APDLHJFM_01431 8.4e-188 K Cell envelope-related transcriptional attenuator domain
APDLHJFM_01432 2.4e-254 V ABC transporter permease
APDLHJFM_01433 6.6e-186 V ABC transporter
APDLHJFM_01434 3.1e-144 T HD domain
APDLHJFM_01435 7.9e-160 S Glutamine amidotransferase domain
APDLHJFM_01436 0.0 kup P Transport of potassium into the cell
APDLHJFM_01437 2e-185 tatD L TatD related DNase
APDLHJFM_01438 0.0 yknV V ABC transporter
APDLHJFM_01439 0.0 mdlA2 V ABC transporter
APDLHJFM_01440 2.8e-62 G domain, Protein
APDLHJFM_01441 4.9e-08 G domain, Protein
APDLHJFM_01442 5.9e-263 S AAA domain
APDLHJFM_01443 3.1e-54 EGP Major facilitator Superfamily
APDLHJFM_01444 4e-34 EGP Major facilitator Superfamily
APDLHJFM_01445 5.7e-21 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
APDLHJFM_01446 0.0 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
APDLHJFM_01447 0.0 oppD P Belongs to the ABC transporter superfamily
APDLHJFM_01448 1.2e-172 dppC EP N-terminal TM domain of oligopeptide transport permease C
APDLHJFM_01449 5.1e-176 appB EP Binding-protein-dependent transport system inner membrane component
APDLHJFM_01450 2.5e-275 pepC 3.4.22.40 E Peptidase C1-like family
APDLHJFM_01451 3.3e-46
APDLHJFM_01452 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
APDLHJFM_01453 9.4e-121
APDLHJFM_01454 4.8e-185 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
APDLHJFM_01456 1.9e-256 G MFS/sugar transport protein
APDLHJFM_01457 3.1e-178 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
APDLHJFM_01458 0.0 lmrA2 V ABC transporter transmembrane region
APDLHJFM_01459 0.0 lmrA1 V ABC transporter, ATP-binding protein
APDLHJFM_01460 3.9e-90 ydgJ K helix_turn_helix multiple antibiotic resistance protein
APDLHJFM_01461 9.1e-281 cycA E Amino acid permease
APDLHJFM_01462 0.0 V FtsX-like permease family
APDLHJFM_01463 2.2e-128 V ABC transporter
APDLHJFM_01464 7e-270 aroP E aromatic amino acid transport protein AroP K03293
APDLHJFM_01465 1.3e-105 S Protein of unknown function, DUF624
APDLHJFM_01466 5.8e-152 rafG G ABC transporter permease
APDLHJFM_01467 5.7e-147 malC G Binding-protein-dependent transport system inner membrane component
APDLHJFM_01468 4.4e-154 K Psort location Cytoplasmic, score
APDLHJFM_01469 2.4e-253 amyE G Bacterial extracellular solute-binding protein
APDLHJFM_01470 8.4e-136 G Phosphoglycerate mutase family
APDLHJFM_01471 1.2e-59 S Protein of unknown function (DUF4235)
APDLHJFM_01472 7.4e-138 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
APDLHJFM_01473 0.0 pip S YhgE Pip domain protein
APDLHJFM_01474 1.6e-276 pip S YhgE Pip domain protein
APDLHJFM_01475 1.8e-40
APDLHJFM_01476 3.3e-30 V AAA domain, putative AbiEii toxin, Type IV TA system
APDLHJFM_01477 2.4e-136 L PFAM Relaxase mobilization nuclease family protein
APDLHJFM_01478 5.5e-141 S Fic/DOC family
APDLHJFM_01482 9.8e-127 2.7.11.1 S HipA-like C-terminal domain
APDLHJFM_01483 1e-52 xerH L Phage integrase family
APDLHJFM_01485 3.4e-94 M Peptidase family M23
APDLHJFM_01486 5.2e-253 G ABC transporter substrate-binding protein
APDLHJFM_01487 2.3e-242 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
APDLHJFM_01488 1.5e-208 guaB 1.1.1.205 F IMP dehydrogenase family protein
APDLHJFM_01489 3.3e-91
APDLHJFM_01490 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
APDLHJFM_01491 1.7e-87 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
APDLHJFM_01492 5.8e-144 rpsB J Belongs to the universal ribosomal protein uS2 family
APDLHJFM_01493 1.4e-145 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
APDLHJFM_01494 2.8e-134 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
APDLHJFM_01495 1.5e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
APDLHJFM_01496 3.7e-174 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
APDLHJFM_01497 1.4e-209 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
APDLHJFM_01498 8.7e-72 3.5.1.124 S DJ-1/PfpI family
APDLHJFM_01499 6.1e-140 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
APDLHJFM_01500 5.3e-71 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
APDLHJFM_01501 1.4e-297 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
APDLHJFM_01502 1.7e-63 yijF S Domain of unknown function (DUF1287)
APDLHJFM_01503 2.3e-171 3.6.4.12
APDLHJFM_01504 5.3e-77
APDLHJFM_01505 3.1e-62 yeaO K Protein of unknown function, DUF488
APDLHJFM_01507 2.5e-263 mmuP E amino acid
APDLHJFM_01508 5.4e-75 2.6.1.76 EGP Major Facilitator Superfamily
APDLHJFM_01510 1.2e-53 hipA 2.7.11.1 S kinase activity
APDLHJFM_01511 1.3e-45 K sequence-specific DNA binding
APDLHJFM_01512 5.1e-108
APDLHJFM_01515 5.2e-121
APDLHJFM_01516 3.3e-50
APDLHJFM_01517 3.6e-99 S Acetyltransferase (GNAT) domain
APDLHJFM_01518 1.4e-95 MA20_25245 K FR47-like protein
APDLHJFM_01519 0.0 L Domain of unknown function (DUF4368)
APDLHJFM_01520 8.9e-43 S Helix-turn-helix domain
APDLHJFM_01521 1.1e-49 phyR K Sigma-70, region 4
APDLHJFM_01522 1.2e-238 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
APDLHJFM_01523 7.3e-255 S Metal-independent alpha-mannosidase (GH125)
APDLHJFM_01524 1.1e-31
APDLHJFM_01525 6.1e-131 C Putative TM nitroreductase
APDLHJFM_01526 5.8e-169 EG EamA-like transporter family
APDLHJFM_01527 2e-70 pdxH S Pfam:Pyridox_oxidase
APDLHJFM_01528 1.3e-232 L ribosomal rna small subunit methyltransferase
APDLHJFM_01529 5.4e-166 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
APDLHJFM_01530 5.3e-170 corA P CorA-like Mg2+ transporter protein
APDLHJFM_01531 1.2e-160 ET Bacterial periplasmic substrate-binding proteins
APDLHJFM_01532 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
APDLHJFM_01533 1.6e-44 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
APDLHJFM_01534 2.4e-311 comE S Competence protein
APDLHJFM_01535 2.4e-173 holA 2.7.7.7 L DNA polymerase III delta subunit
APDLHJFM_01536 4.4e-87 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
APDLHJFM_01537 1e-159 yeaZ 2.3.1.234 O Glycoprotease family
APDLHJFM_01538 1.7e-105 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
APDLHJFM_01539 5.8e-194 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
APDLHJFM_01541 1.2e-120 K helix_turn_helix, Lux Regulon
APDLHJFM_01542 3.3e-239 T Histidine kinase
APDLHJFM_01544 1.2e-56
APDLHJFM_01545 1.5e-139
APDLHJFM_01546 8.6e-117 S ABC-2 family transporter protein
APDLHJFM_01547 2.2e-93
APDLHJFM_01548 8.6e-100 K DNA binding
APDLHJFM_01549 4.8e-102 dam2 2.1.1.72 L D12 class N6 adenine-specific DNA methyltransferase
APDLHJFM_01551 0.0 U Type IV secretory system Conjugative DNA transfer
APDLHJFM_01552 7.6e-52
APDLHJFM_01553 6.1e-51
APDLHJFM_01555 2.8e-135 S Protein of unknown function (DUF3801)
APDLHJFM_01556 7.4e-289 ltrBE1 U Relaxase/Mobilisation nuclease domain
APDLHJFM_01557 1e-63 S Bacterial mobilisation protein (MobC)
APDLHJFM_01558 5.5e-42 K Protein of unknown function (DUF2442)
APDLHJFM_01559 2.1e-44 S Domain of unknown function (DUF4160)
APDLHJFM_01561 5.3e-31
APDLHJFM_01562 2.7e-68
APDLHJFM_01563 0.0 topB 5.99.1.2 L DNA topoisomerase
APDLHJFM_01566 2.6e-64
APDLHJFM_01567 1.1e-58
APDLHJFM_01568 1.3e-51
APDLHJFM_01569 3.6e-25
APDLHJFM_01570 4.5e-143 fic D Fic/DOC family
APDLHJFM_01571 8.7e-259 L Phage integrase family
APDLHJFM_01572 1.1e-71
APDLHJFM_01574 4.4e-255 S HipA-like C-terminal domain
APDLHJFM_01575 1e-171 S Fic/DOC family
APDLHJFM_01576 7e-39
APDLHJFM_01577 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
APDLHJFM_01578 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
APDLHJFM_01579 1.1e-175 srrA1 G Bacterial extracellular solute-binding protein
APDLHJFM_01580 1.3e-123 G Binding-protein-dependent transport system inner membrane component
APDLHJFM_01581 4.5e-125 lacG G Binding-protein-dependent transport system inner membrane component
APDLHJFM_01582 1.4e-221 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
APDLHJFM_01583 3.6e-138 K helix_turn _helix lactose operon repressor
APDLHJFM_01584 0.0 XK27_00515 D Cell surface antigen C-terminus
APDLHJFM_01585 8.9e-26
APDLHJFM_01586 5.3e-145
APDLHJFM_01587 8.8e-62 S PrgI family protein
APDLHJFM_01588 0.0 trsE U type IV secretory pathway VirB4
APDLHJFM_01589 1.4e-261 isp2 3.2.1.96 M CHAP domain
APDLHJFM_01590 4.9e-96
APDLHJFM_01591 1.4e-278 S Uncharacterized protein conserved in bacteria (DUF2252)
APDLHJFM_01592 1.4e-264 glnA2 6.3.1.2 E glutamine synthetase
APDLHJFM_01593 2.6e-217 EGP Major facilitator Superfamily
APDLHJFM_01594 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
APDLHJFM_01595 3.4e-123 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
APDLHJFM_01596 6.9e-273 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
APDLHJFM_01597 1.7e-176 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
APDLHJFM_01598 1.4e-162 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
APDLHJFM_01599 6.9e-130 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
APDLHJFM_01600 3e-47 M Lysin motif
APDLHJFM_01601 8.4e-78 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
APDLHJFM_01602 7.5e-230 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
APDLHJFM_01603 0.0 L DNA helicase
APDLHJFM_01604 1.3e-93 mraZ K Belongs to the MraZ family
APDLHJFM_01605 5.1e-190 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
APDLHJFM_01606 1.4e-67 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
APDLHJFM_01607 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
APDLHJFM_01608 2e-155 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
APDLHJFM_01609 2.6e-240 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
APDLHJFM_01610 4.5e-205 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
APDLHJFM_01611 5.1e-273 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
APDLHJFM_01612 1.5e-225 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
APDLHJFM_01613 6.5e-218 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
APDLHJFM_01614 6.8e-284 murC 6.3.2.8 M Belongs to the MurCDEF family
APDLHJFM_01615 6.2e-172 ftsQ 6.3.2.4 D Cell division protein FtsQ
APDLHJFM_01616 6.9e-15
APDLHJFM_01617 3.5e-64
APDLHJFM_01619 1.3e-47
APDLHJFM_01622 1.2e-07
APDLHJFM_01624 2.1e-50 Q methyltransferase
APDLHJFM_01625 2.6e-08
APDLHJFM_01626 2.5e-73 dcm 2.1.1.37 L DNA (cytosine-5-)-methyltransferase activity
APDLHJFM_01627 2.1e-28 2.1.1.37 L DNA (cytosine-5-)-methyltransferase activity
APDLHJFM_01628 5.4e-104 K BRO family, N-terminal domain
APDLHJFM_01632 6.3e-86 yqaJ L YqaJ-like viral recombinase domain
APDLHJFM_01633 3.2e-73 recT L RecT family
APDLHJFM_01635 1.2e-48 ssb1 L Single-strand binding protein family
APDLHJFM_01636 3.4e-62
APDLHJFM_01637 1e-50
APDLHJFM_01642 9.2e-43 D DNA N-6-adenine-methyltransferase (Dam)
APDLHJFM_01643 4.2e-75
APDLHJFM_01644 9.8e-09
APDLHJFM_01648 4.3e-15
APDLHJFM_01649 8e-121
APDLHJFM_01650 2e-49 L HNH nucleases
APDLHJFM_01652 3.3e-43
APDLHJFM_01653 6.2e-304 S Terminase
APDLHJFM_01654 1.3e-68 S Phage portal protein
APDLHJFM_01655 3.7e-33 xkdG S Phage capsid family
APDLHJFM_01656 1.7e-112 xkdG S Phage capsid family
APDLHJFM_01658 1.6e-19
APDLHJFM_01659 1.8e-31
APDLHJFM_01660 5.4e-25
APDLHJFM_01661 5.8e-31
APDLHJFM_01662 1.4e-43
APDLHJFM_01664 1.4e-29
APDLHJFM_01666 1e-83 NT phage tail tape measure protein
APDLHJFM_01668 0.0 ebh 2.1.1.80, 3.1.1.61 S cellulase activity
APDLHJFM_01670 2.3e-37
APDLHJFM_01677 8.4e-76 V Ami_2
APDLHJFM_01678 3.8e-15
APDLHJFM_01679 6.9e-53
APDLHJFM_01680 1.4e-27 K Transcriptional regulator
APDLHJFM_01681 2.8e-11
APDLHJFM_01682 1.7e-09
APDLHJFM_01683 6.4e-130 int8 L Phage integrase family
APDLHJFM_01684 2.2e-87 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
APDLHJFM_01685 1.8e-99 G Major Facilitator Superfamily
APDLHJFM_01686 1.2e-168 2.7.1.4 G pfkB family carbohydrate kinase
APDLHJFM_01687 2.2e-224 GK ROK family
APDLHJFM_01688 2.2e-165 2.7.1.2 GK ROK family
APDLHJFM_01689 8.1e-210 GK ROK family
APDLHJFM_01690 1.4e-150 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
APDLHJFM_01691 1.1e-247 nagA 3.5.1.25 G Amidohydrolase family
APDLHJFM_01692 6.6e-98 3.6.1.55 F NUDIX domain
APDLHJFM_01693 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
APDLHJFM_01694 7.6e-302 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
APDLHJFM_01695 0.0 smc D Required for chromosome condensation and partitioning
APDLHJFM_01696 5.7e-80 V Acetyltransferase (GNAT) domain
APDLHJFM_01697 6.9e-192 V Acetyltransferase (GNAT) domain
APDLHJFM_01698 5.1e-295 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
APDLHJFM_01699 1.8e-136 sigH K Belongs to the sigma-70 factor family. ECF subfamily
APDLHJFM_01700 3.3e-52
APDLHJFM_01701 1.1e-188 galM 5.1.3.3 G Aldose 1-epimerase
APDLHJFM_01702 8.5e-192 galM 5.1.3.3 G Aldose 1-epimerase
APDLHJFM_01703 3.7e-182 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
APDLHJFM_01704 1.2e-88 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
APDLHJFM_01705 1.3e-196 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
APDLHJFM_01706 3.8e-136 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
APDLHJFM_01707 1.2e-21 S Spermine/spermidine synthase domain
APDLHJFM_01708 1.1e-112 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
APDLHJFM_01709 6.2e-25 rpmI J Ribosomal protein L35
APDLHJFM_01710 1.3e-61 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
APDLHJFM_01711 2.7e-216 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
APDLHJFM_01712 4.1e-159 xerD D recombinase XerD
APDLHJFM_01713 3.8e-152 soj D CobQ CobB MinD ParA nucleotide binding domain protein
APDLHJFM_01714 1.7e-151 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
APDLHJFM_01715 2.8e-117 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
APDLHJFM_01716 2.2e-159 nrtR 3.6.1.55 F NUDIX hydrolase
APDLHJFM_01717 9.8e-252 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
APDLHJFM_01718 1.3e-301 nadB 1.3.5.4, 1.4.3.16, 2.4.2.19 H Catalyzes the oxidation of L-aspartate to iminoaspartate
APDLHJFM_01719 3.8e-162 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, N-terminal domain
APDLHJFM_01720 6.7e-240 iscS1 2.8.1.7 E Aminotransferase class-V
APDLHJFM_01721 5.9e-19 naiP U Sugar (and other) transporter
APDLHJFM_01722 0.0 V FtsX-like permease family
APDLHJFM_01723 4.8e-137 V ATPases associated with a variety of cellular activities
APDLHJFM_01724 7e-107 K Virulence activator alpha C-term
APDLHJFM_01725 0.0 typA T Elongation factor G C-terminus
APDLHJFM_01726 5.2e-78
APDLHJFM_01727 3.8e-187 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
APDLHJFM_01728 3.2e-189 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
APDLHJFM_01729 4.5e-42
APDLHJFM_01730 0.0 MV MacB-like periplasmic core domain
APDLHJFM_01731 6.4e-148 V ABC transporter, ATP-binding protein
APDLHJFM_01732 4.6e-188 xerC D Belongs to the 'phage' integrase family. XerC subfamily
APDLHJFM_01733 0.0 E ABC transporter, substrate-binding protein, family 5
APDLHJFM_01734 8.9e-154 dppB EP Binding-protein-dependent transport system inner membrane component
APDLHJFM_01735 1.4e-173 dppC EP N-terminal TM domain of oligopeptide transport permease C
APDLHJFM_01736 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
APDLHJFM_01737 3.3e-171 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
APDLHJFM_01738 1.4e-153 S Protein of unknown function (DUF3710)
APDLHJFM_01739 3.8e-134 S Protein of unknown function (DUF3159)
APDLHJFM_01740 3.1e-242 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
APDLHJFM_01741 6.9e-96
APDLHJFM_01742 0.0 ctpE P E1-E2 ATPase
APDLHJFM_01743 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
APDLHJFM_01744 1.3e-119 E Psort location Cytoplasmic, score 8.87
APDLHJFM_01745 3.5e-47 K helix_turn_helix, Lux Regulon
APDLHJFM_01746 2.8e-135 ybhL S Belongs to the BI1 family
APDLHJFM_01747 2.1e-166 ydeD EG EamA-like transporter family
APDLHJFM_01748 5.2e-150 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
APDLHJFM_01749 2e-277 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
APDLHJFM_01750 1.1e-181 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
APDLHJFM_01751 1.7e-149 fic D Fic/DOC family
APDLHJFM_01752 0.0 ftsK D FtsK SpoIIIE family protein
APDLHJFM_01753 1.2e-117 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
APDLHJFM_01754 4.6e-97 cinA 3.5.1.42 S Belongs to the CinA family
APDLHJFM_01755 1.2e-78 K Helix-turn-helix XRE-family like proteins
APDLHJFM_01756 7e-39 S Protein of unknown function (DUF3046)
APDLHJFM_01757 1.1e-196 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
APDLHJFM_01758 1.5e-101 recX S Modulates RecA activity
APDLHJFM_01759 1.3e-111 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
APDLHJFM_01760 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
APDLHJFM_01761 3.5e-191 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
APDLHJFM_01762 5.3e-119
APDLHJFM_01763 6.2e-131 plsC2 2.3.1.51 I Phosphate acyltransferases
APDLHJFM_01764 0.0 pknL 2.7.11.1 KLT PASTA
APDLHJFM_01765 2.9e-196 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
APDLHJFM_01766 3.3e-115
APDLHJFM_01767 8.2e-191 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
APDLHJFM_01768 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
APDLHJFM_01769 4.5e-222 G Major Facilitator Superfamily
APDLHJFM_01770 2e-172 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
APDLHJFM_01771 0.0 lhr L DEAD DEAH box helicase
APDLHJFM_01772 1.2e-48 K Psort location Cytoplasmic, score
APDLHJFM_01773 5.2e-43 K Psort location Cytoplasmic, score
APDLHJFM_01774 6e-43 K AraC-like ligand binding domain
APDLHJFM_01775 3e-110 G Bacterial extracellular solute-binding protein
APDLHJFM_01776 3.2e-09 E GDSL-like Lipase/Acylhydrolase
APDLHJFM_01777 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
APDLHJFM_01778 2.2e-232 S Type I phosphodiesterase / nucleotide pyrophosphatase
APDLHJFM_01779 1.2e-149 S Protein of unknown function (DUF3071)
APDLHJFM_01780 1.4e-47 S Domain of unknown function (DUF4193)
APDLHJFM_01781 1.7e-84 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
APDLHJFM_01782 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
APDLHJFM_01783 2.9e-115 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
APDLHJFM_01785 4.7e-66
APDLHJFM_01786 1e-128
APDLHJFM_01787 3.9e-27
APDLHJFM_01788 1.4e-14
APDLHJFM_01789 2e-99 S Helix-turn-helix domain
APDLHJFM_01790 1.1e-43 S Helix-turn-helix domain
APDLHJFM_01791 7.4e-42
APDLHJFM_01792 1.8e-89 S Transcription factor WhiB
APDLHJFM_01793 5.7e-102 parA D AAA domain
APDLHJFM_01794 6.3e-23
APDLHJFM_01795 8.1e-13 S Transcription factor WhiB
APDLHJFM_01796 2.9e-39
APDLHJFM_01797 1.1e-46 4.2.1.68 M Enolase C-terminal domain-like
APDLHJFM_01798 9.1e-130 S Amidohydrolase
APDLHJFM_01799 2.8e-165 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
APDLHJFM_01800 0.0 2.4.1.230, 3.2.1.51 GH65,GH95 G Glycosyl hydrolase family 65, N-terminal domain
APDLHJFM_01801 2e-157 yvgN 1.1.1.346 S Aldo/keto reductase family
APDLHJFM_01802 1.6e-54 acyP 3.6.1.7 C Acylphosphatase
APDLHJFM_01803 7.8e-255 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
APDLHJFM_01804 1.8e-220 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
APDLHJFM_01805 4.6e-111 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
APDLHJFM_01806 5e-99
APDLHJFM_01807 1.4e-121 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
APDLHJFM_01808 1.3e-131 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
APDLHJFM_01809 3.8e-147 gtrB GT2 M Glycosyl transferase family 2
APDLHJFM_01810 1e-229 rgpD 3.6.3.38, 3.6.3.40 GM ABC transporter, ATP-binding protein
APDLHJFM_01811 2.7e-149 rgpC U Transport permease protein
APDLHJFM_01812 7.9e-204 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
APDLHJFM_01813 1.5e-261 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
APDLHJFM_01814 1.1e-172 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
APDLHJFM_01815 1.4e-227 lytC 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
APDLHJFM_01816 1.6e-16
APDLHJFM_01817 1.9e-66 L Helix-turn-helix domain
APDLHJFM_01818 4.5e-67 insK L Integrase core domain
APDLHJFM_01819 3.6e-148 L IstB-like ATP binding protein
APDLHJFM_01820 9.8e-296 L PFAM Integrase catalytic
APDLHJFM_01821 6.3e-272 S Glucosyl transferase GtrII
APDLHJFM_01822 2.8e-252 S Polysaccharide pyruvyl transferase
APDLHJFM_01823 0.0 rgpF M Rhamnan synthesis protein F
APDLHJFM_01824 1.7e-190 I Acyltransferase family
APDLHJFM_01825 5.4e-172 1.1.1.339 GM NAD dependent epimerase/dehydratase family
APDLHJFM_01826 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
APDLHJFM_01827 9.5e-172 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
APDLHJFM_01828 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
APDLHJFM_01829 4.5e-294 pccB I Carboxyl transferase domain
APDLHJFM_01830 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
APDLHJFM_01831 7.4e-93 bioY S BioY family
APDLHJFM_01832 1.4e-162 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
APDLHJFM_01833 0.0
APDLHJFM_01834 1.4e-164 QT PucR C-terminal helix-turn-helix domain
APDLHJFM_01835 2.7e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
APDLHJFM_01836 1e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
APDLHJFM_01837 2.5e-146 K Psort location Cytoplasmic, score
APDLHJFM_01838 7e-110 nusG K Participates in transcription elongation, termination and antitermination
APDLHJFM_01839 4.7e-32 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
APDLHJFM_01841 3.8e-229 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
APDLHJFM_01842 1e-221 G polysaccharide deacetylase
APDLHJFM_01843 1.7e-196 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
APDLHJFM_01844 3.5e-310 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
APDLHJFM_01845 5.8e-39 rpmA J Ribosomal L27 protein
APDLHJFM_01846 1.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
APDLHJFM_01847 0.0 rne 3.1.26.12 J Ribonuclease E/G family
APDLHJFM_01848 1.6e-232 dapE 3.5.1.18 E Peptidase dimerisation domain
APDLHJFM_01849 1.9e-167 mdcF S Transporter, auxin efflux carrier (AEC) family protein
APDLHJFM_01850 8.3e-165 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
APDLHJFM_01851 3.2e-149 S Amidohydrolase
APDLHJFM_01852 5.4e-202 fucP G Major Facilitator Superfamily
APDLHJFM_01853 2.8e-148 IQ KR domain
APDLHJFM_01854 1.1e-250 4.2.1.68 M Enolase C-terminal domain-like
APDLHJFM_01855 1.2e-191 K Bacterial regulatory proteins, lacI family
APDLHJFM_01856 4.1e-254 V Efflux ABC transporter, permease protein
APDLHJFM_01857 5.2e-139 V ATPases associated with a variety of cellular activities
APDLHJFM_01858 1.6e-28 S Protein of unknown function (DUF1778)
APDLHJFM_01859 2e-91 K Acetyltransferase (GNAT) family
APDLHJFM_01860 1.5e-280 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
APDLHJFM_01861 1.7e-207 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
APDLHJFM_01862 1.8e-237 hom 1.1.1.3 E Homoserine dehydrogenase
APDLHJFM_01863 4.3e-54 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
APDLHJFM_01864 2.3e-55 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
APDLHJFM_01865 2.4e-303 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
APDLHJFM_01866 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
APDLHJFM_01867 8.1e-131 K Bacterial regulatory proteins, tetR family
APDLHJFM_01868 2.7e-222 G Transmembrane secretion effector
APDLHJFM_01869 6.8e-256 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
APDLHJFM_01870 5.3e-256 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
APDLHJFM_01871 2.1e-157 ET Bacterial periplasmic substrate-binding proteins
APDLHJFM_01872 3.7e-120 ytmL P Binding-protein-dependent transport system inner membrane component
APDLHJFM_01873 3.6e-140 P Binding-protein-dependent transport system inner membrane component
APDLHJFM_01874 3.5e-105 S L-2-amino-thiazoline-4-carboxylic acid hydrolase
APDLHJFM_01875 3.5e-132 yxeO 3.6.3.21 E ATPases associated with a variety of cellular activities
APDLHJFM_01876 1.8e-220 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
APDLHJFM_01877 1.1e-20 2.7.13.3 T Histidine kinase
APDLHJFM_01878 8.4e-20 S Bacterial PH domain
APDLHJFM_01879 4.6e-131 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
APDLHJFM_01880 1.3e-273 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
APDLHJFM_01881 2.2e-140 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
APDLHJFM_01882 1.3e-262 S Calcineurin-like phosphoesterase
APDLHJFM_01883 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
APDLHJFM_01884 9.2e-235 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
APDLHJFM_01885 8.5e-132
APDLHJFM_01886 0.0 G N-terminal domain of (some) glycogen debranching enzymes
APDLHJFM_01887 1.6e-49 P Binding-protein-dependent transport system inner membrane component
APDLHJFM_01888 3.9e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
APDLHJFM_01889 2.8e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
APDLHJFM_01890 2.2e-215 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
APDLHJFM_01891 2.5e-216 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
APDLHJFM_01892 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
APDLHJFM_01893 3.1e-162 S Auxin Efflux Carrier
APDLHJFM_01894 1.7e-156 fahA Q Fumarylacetoacetate (FAA) hydrolase family
APDLHJFM_01895 9.5e-111 S Domain of unknown function (DUF4190)
APDLHJFM_01896 1.7e-165
APDLHJFM_01897 2.7e-235 glf 5.4.99.9 M UDP-galactopyranose mutase
APDLHJFM_01898 4.2e-45 5.3.1.27 G sugar phosphate isomerase involved in capsule formation
APDLHJFM_01899 2e-59 G Branched-chain amino acid transport system / permease component
APDLHJFM_01900 2.9e-73 P branched-chain amino acid ABC transporter, permease protein
APDLHJFM_01901 8.2e-120 G ATPases associated with a variety of cellular activities
APDLHJFM_01902 1.3e-81 G ABC-type sugar transport system periplasmic component
APDLHJFM_01903 8.6e-167 xylB 1.1.1.57, 2.7.1.17 G Belongs to the FGGY kinase family
APDLHJFM_01904 3.6e-76 xylR GK ROK family
APDLHJFM_01905 1.1e-119
APDLHJFM_01906 5.9e-191 M Glycosyltransferase like family 2
APDLHJFM_01908 2.5e-22 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
APDLHJFM_01909 5.1e-38 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
APDLHJFM_01910 1.1e-27 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
APDLHJFM_01911 5.3e-64 S Predicted membrane protein (DUF2142)
APDLHJFM_01912 0.0 crr 2.7.1.193 G pts system, glucose-specific IIABC component
APDLHJFM_01913 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
APDLHJFM_01914 7.1e-178 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
APDLHJFM_01915 3.6e-73 K Transcriptional regulator
APDLHJFM_01916 4.6e-277 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
APDLHJFM_01917 9.2e-174 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
APDLHJFM_01918 9.1e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
APDLHJFM_01920 1.6e-98
APDLHJFM_01921 3.6e-261 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
APDLHJFM_01922 3.6e-218 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
APDLHJFM_01923 1.2e-219 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
APDLHJFM_01924 1.1e-81 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
APDLHJFM_01925 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
APDLHJFM_01926 3.4e-186 nusA K Participates in both transcription termination and antitermination
APDLHJFM_01927 4.7e-126
APDLHJFM_01928 2.6e-77 K helix_turn _helix lactose operon repressor
APDLHJFM_01930 3.2e-152 E Transglutaminase/protease-like homologues
APDLHJFM_01931 0.0 gcs2 S A circularly permuted ATPgrasp
APDLHJFM_01932 3.3e-169 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
APDLHJFM_01933 1.6e-62 rplQ J Ribosomal protein L17
APDLHJFM_01934 3.4e-183 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
APDLHJFM_01935 1.5e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
APDLHJFM_01936 9.5e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
APDLHJFM_01937 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
APDLHJFM_01938 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
APDLHJFM_01939 2.2e-99 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
APDLHJFM_01940 3.4e-247 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
APDLHJFM_01941 8.1e-76 rplO J binds to the 23S rRNA
APDLHJFM_01942 7e-26 rpmD J Ribosomal protein L30p/L7e
APDLHJFM_01943 6.7e-96 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
APDLHJFM_01944 2.4e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
APDLHJFM_01945 5.4e-95 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
APDLHJFM_01946 5.5e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
APDLHJFM_01947 9.2e-18 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
APDLHJFM_01948 4.4e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
APDLHJFM_01949 1.3e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
APDLHJFM_01950 6.6e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
APDLHJFM_01951 6.4e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
APDLHJFM_01952 4.1e-37 rpmC J Belongs to the universal ribosomal protein uL29 family
APDLHJFM_01953 2.2e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
APDLHJFM_01954 6.4e-100 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
APDLHJFM_01955 5.7e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
APDLHJFM_01956 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
APDLHJFM_01957 1.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
APDLHJFM_01958 7.5e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
APDLHJFM_01959 3.1e-116 rplD J Forms part of the polypeptide exit tunnel
APDLHJFM_01960 8.7e-116 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
APDLHJFM_01961 8e-51 rpsJ J Involved in the binding of tRNA to the ribosomes
APDLHJFM_01962 8.2e-137 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
APDLHJFM_01963 5.6e-145 ywiC S YwiC-like protein
APDLHJFM_01964 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
APDLHJFM_01965 3.1e-170 rhaR_1 K helix_turn_helix, arabinose operon control protein
APDLHJFM_01966 1.5e-194 Z012_01000 1.1.1.14, 1.1.1.9 C Zinc-binding dehydrogenase
APDLHJFM_01967 2.7e-196 EGP Major facilitator Superfamily
APDLHJFM_01968 2.3e-215 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
APDLHJFM_01969 6e-75 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
APDLHJFM_01970 2.2e-233 EGP Major facilitator Superfamily
APDLHJFM_01971 2.3e-179 tdh 1.1.1.14 C Zinc-binding dehydrogenase
APDLHJFM_01972 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
APDLHJFM_01973 3.7e-82 rpsI J Belongs to the universal ribosomal protein uS9 family
APDLHJFM_01974 3.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
APDLHJFM_01975 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
APDLHJFM_01976 8.4e-117
APDLHJFM_01977 3.4e-112 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
APDLHJFM_01978 6.3e-185 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
APDLHJFM_01979 7e-117 M Bacterial capsule synthesis protein PGA_cap
APDLHJFM_01980 6.3e-245 bglA 3.2.1.21 G Glycosyl hydrolase family 1
APDLHJFM_01981 6.1e-160 U Binding-protein-dependent transport system inner membrane component
APDLHJFM_01982 5.5e-164 malC U Binding-protein-dependent transport system inner membrane component
APDLHJFM_01983 4.9e-243 malE G Bacterial extracellular solute-binding protein
APDLHJFM_01984 1.4e-217 rbsR K helix_turn _helix lactose operon repressor
APDLHJFM_01985 5.2e-22
APDLHJFM_01987 1.3e-62 S EamA-like transporter family
APDLHJFM_01988 3.9e-21 S EamA-like transporter family
APDLHJFM_01989 3.7e-238 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
APDLHJFM_01990 6.1e-224 dapC E Aminotransferase class I and II
APDLHJFM_01991 2.9e-59 fdxA C 4Fe-4S binding domain
APDLHJFM_01992 8e-269 E aromatic amino acid transport protein AroP K03293
APDLHJFM_01993 1.9e-220 murB 1.3.1.98 M Cell wall formation
APDLHJFM_01994 4.1e-25 rpmG J Ribosomal protein L33
APDLHJFM_01998 1.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
APDLHJFM_01999 1.1e-135
APDLHJFM_02000 1e-114 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
APDLHJFM_02001 1.1e-55 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
APDLHJFM_02002 4.3e-31 fmdB S Putative regulatory protein
APDLHJFM_02003 3.6e-106 flgA NO SAF
APDLHJFM_02004 6.6e-19 L Superfamily I DNA and RNA helicases and helicase subunits
APDLHJFM_02005 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
APDLHJFM_02006 1.1e-192 T Forkhead associated domain
APDLHJFM_02007 9.3e-49 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
APDLHJFM_02008 2.4e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
APDLHJFM_02009 7.6e-146 3.2.1.8 S alpha beta
APDLHJFM_02010 1.1e-251 pbuO S Permease family
APDLHJFM_02011 1.2e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
APDLHJFM_02012 1.3e-171 pstA P Phosphate transport system permease
APDLHJFM_02013 1.2e-156 pstC P probably responsible for the translocation of the substrate across the membrane
APDLHJFM_02014 1.3e-202 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
APDLHJFM_02015 3.8e-142 KT Transcriptional regulatory protein, C terminal
APDLHJFM_02016 2.6e-207 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
APDLHJFM_02017 1e-240 EGP Sugar (and other) transporter
APDLHJFM_02018 6.3e-123 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
APDLHJFM_02019 1.5e-236 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
APDLHJFM_02020 4.8e-218 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
APDLHJFM_02021 2.2e-87 ebgC G YhcH YjgK YiaL family protein
APDLHJFM_02022 0.0 ebgA 3.2.1.23 G Psort location Cytoplasmic, score 8.87
APDLHJFM_02023 5.6e-115 pgmB 5.4.2.6 S phosphonoacetaldehyde hydrolase activity
APDLHJFM_02024 9.6e-153 EG EamA-like transporter family
APDLHJFM_02025 0.0 kojP 2.4.1.230 GH65 G Glycosyl hydrolase family 65 central catalytic domain
APDLHJFM_02026 1.9e-152 P Binding-protein-dependent transport system inner membrane component
APDLHJFM_02027 5.3e-170 malC U Binding-protein-dependent transport system inner membrane component
APDLHJFM_02028 1.8e-237 G Bacterial extracellular solute-binding protein
APDLHJFM_02029 4.6e-188 K Periplasmic binding protein domain
APDLHJFM_02030 2.7e-100 U MarC family integral membrane protein
APDLHJFM_02031 1.3e-267 pepC 3.4.22.40 E Peptidase C1-like family
APDLHJFM_02032 1.5e-266 pepC 3.4.22.40 E Peptidase C1-like family
APDLHJFM_02033 3.6e-45 D nuclear chromosome segregation
APDLHJFM_02034 2.6e-126 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
APDLHJFM_02035 8.4e-151 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
APDLHJFM_02036 1.6e-199 yfiH Q Multi-copper polyphenol oxidoreductase laccase
APDLHJFM_02037 5.9e-304 yegQ O Peptidase family U32 C-terminal domain
APDLHJFM_02038 4.1e-178 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
APDLHJFM_02039 7.7e-103 rsmD 2.1.1.171 L Conserved hypothetical protein 95
APDLHJFM_02040 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
APDLHJFM_02041 2.5e-29 rpmB J Ribosomal L28 family
APDLHJFM_02042 1.6e-196 yegV G pfkB family carbohydrate kinase
APDLHJFM_02043 8.7e-240 yxiO S Vacuole effluxer Atg22 like
APDLHJFM_02044 1.4e-130 K helix_turn_helix, mercury resistance
APDLHJFM_02045 2.4e-59 T Toxic component of a toxin-antitoxin (TA) module
APDLHJFM_02046 8.1e-54 relB L RelB antitoxin
APDLHJFM_02047 4.3e-23 yxiO G Major facilitator Superfamily
APDLHJFM_02048 1.8e-182 K Helix-turn-helix XRE-family like proteins
APDLHJFM_02049 2.9e-116 S Alpha/beta hydrolase family
APDLHJFM_02053 9.5e-46 XK27_04590 S NADPH-dependent FMN reductase
APDLHJFM_02055 0.0 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
APDLHJFM_02056 2.5e-167 G ABC transporter permease
APDLHJFM_02057 6.9e-173 malC G Binding-protein-dependent transport system inner membrane component
APDLHJFM_02058 3e-248 G Bacterial extracellular solute-binding protein
APDLHJFM_02060 1.1e-242 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
APDLHJFM_02061 4.4e-182 I Diacylglycerol kinase catalytic domain
APDLHJFM_02062 7.4e-118 arbG K CAT RNA binding domain
APDLHJFM_02063 3.4e-134 S Protein of unknown function (DUF3801)
APDLHJFM_02064 9.5e-264 rlx U Relaxase/Mobilisation nuclease domain
APDLHJFM_02065 5.9e-70 S Bacterial mobilisation protein (MobC)
APDLHJFM_02066 1.2e-61
APDLHJFM_02067 1.8e-40
APDLHJFM_02068 2.1e-240 K ParB-like nuclease domain
APDLHJFM_02069 1.8e-107 S Domain of unknown function (DUF4192)
APDLHJFM_02070 6.8e-79 S Nucleotidyltransferase domain
APDLHJFM_02071 8e-182 L Phage integrase family
APDLHJFM_02073 9.4e-16 L Phage integrase family
APDLHJFM_02074 5.2e-13 sprF 4.6.1.1 M Cell surface antigen C-terminus
APDLHJFM_02075 1.9e-267 lacS G Psort location CytoplasmicMembrane, score 10.00
APDLHJFM_02076 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
APDLHJFM_02077 4.8e-185 lacR K Transcriptional regulator, LacI family
APDLHJFM_02078 6.3e-22 L Helix-turn-helix domain
APDLHJFM_02079 5.7e-255 G Bacterial extracellular solute-binding protein
APDLHJFM_02080 2.2e-221 GK ROK family
APDLHJFM_02081 0.0 G Glycosyl hydrolase family 20, domain 2
APDLHJFM_02082 2.8e-12 S Psort location CytoplasmicMembrane, score 9.99
APDLHJFM_02083 8.1e-220 vex3 V ABC transporter permease
APDLHJFM_02084 1.6e-211 vex1 V Efflux ABC transporter, permease protein
APDLHJFM_02085 4.1e-110 vex2 V ABC transporter, ATP-binding protein
APDLHJFM_02086 3.2e-11 azlC E AzlC protein
APDLHJFM_02087 1.5e-97 ptpA 3.1.3.48 T low molecular weight
APDLHJFM_02088 1e-127 folA 1.5.1.3 H dihydrofolate reductase
APDLHJFM_02089 1e-167 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
APDLHJFM_02090 3.4e-73 attW O OsmC-like protein
APDLHJFM_02091 1.5e-189 T Universal stress protein family
APDLHJFM_02092 3e-104 M NlpC/P60 family
APDLHJFM_02093 1.1e-101 M NlpC/P60 family
APDLHJFM_02094 3.5e-169 usp 3.5.1.28 CBM50 S CHAP domain
APDLHJFM_02095 5e-215 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
APDLHJFM_02096 1.8e-32
APDLHJFM_02097 5.1e-173 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
APDLHJFM_02098 5.4e-116 phoU P Plays a role in the regulation of phosphate uptake
APDLHJFM_02099 1.1e-138 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
APDLHJFM_02100 1.1e-175 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
APDLHJFM_02101 2.3e-311 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
APDLHJFM_02103 1.3e-218 araJ EGP Major facilitator Superfamily
APDLHJFM_02104 0.0 S Domain of unknown function (DUF4037)
APDLHJFM_02105 2.9e-116 S Protein of unknown function (DUF4125)
APDLHJFM_02106 0.0 S alpha beta
APDLHJFM_02107 4.4e-68
APDLHJFM_02108 4.2e-287 pspC KT PspC domain
APDLHJFM_02109 4.4e-236 tcsS3 KT PspC domain
APDLHJFM_02110 2.9e-117 degU K helix_turn_helix, Lux Regulon
APDLHJFM_02111 4.1e-168 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
APDLHJFM_02112 7.5e-205 mdsC 2.7.1.162, 2.7.1.39 S Phosphotransferase enzyme family
APDLHJFM_02113 1.5e-64 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)