ORF_ID e_value Gene_name EC_number CAZy COGs Description
JOFJPCFG_00001 1.1e-256 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JOFJPCFG_00002 4.8e-202 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
JOFJPCFG_00003 1.1e-29 yyzM S Protein conserved in bacteria
JOFJPCFG_00004 8.6e-204 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
JOFJPCFG_00005 4e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
JOFJPCFG_00006 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JOFJPCFG_00007 3e-38 yabO J Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
JOFJPCFG_00008 3.9e-60 divIC D Septum formation initiator
JOFJPCFG_00010 1.3e-240 XK27_09285 3.5.2.6 V Beta-lactamase enzyme family
JOFJPCFG_00011 7.2e-239 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
JOFJPCFG_00012 4.5e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
JOFJPCFG_00013 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JOFJPCFG_00014 9.2e-68 L Transposase
JOFJPCFG_00015 1.9e-46 L transposase activity
JOFJPCFG_00016 2.6e-09 L transposase activity
JOFJPCFG_00017 3.7e-11 L transposition
JOFJPCFG_00018 4.9e-31 L Integrase core domain protein
JOFJPCFG_00019 7.4e-17 L Integrase core domain protein
JOFJPCFG_00028 5.3e-11
JOFJPCFG_00034 3.6e-138 mreC M Involved in formation and maintenance of cell shape
JOFJPCFG_00035 6.5e-85 mreD M Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
JOFJPCFG_00036 3.1e-89 usp 3.5.1.28 CBM50 S CHAP domain
JOFJPCFG_00037 1.2e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JOFJPCFG_00038 1.5e-37
JOFJPCFG_00039 7.7e-219 araT 2.6.1.1 E Aminotransferase
JOFJPCFG_00040 7.7e-143 recO L Involved in DNA repair and RecF pathway recombination
JOFJPCFG_00041 1.1e-178 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
JOFJPCFG_00042 4.2e-34 acpP1 IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
JOFJPCFG_00043 1.3e-128 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
JOFJPCFG_00044 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JOFJPCFG_00045 1.3e-276 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JOFJPCFG_00046 1.8e-184 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
JOFJPCFG_00047 2.7e-100 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JOFJPCFG_00048 2.3e-295 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
JOFJPCFG_00049 4.2e-49 L Integrase core domain protein
JOFJPCFG_00050 6.8e-161 S CHAP domain
JOFJPCFG_00051 1.7e-240 purD 6.3.4.13 F Belongs to the GARS family
JOFJPCFG_00052 1.9e-82 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JOFJPCFG_00053 6.5e-204 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JOFJPCFG_00054 8.7e-248 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JOFJPCFG_00055 0.0 argS 6.1.1.19 J Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
JOFJPCFG_00056 8.2e-70 argR K Regulates arginine biosynthesis genes
JOFJPCFG_00057 1.9e-56 ymcA 3.6.3.21 S Belongs to the UPF0342 family
JOFJPCFG_00058 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JOFJPCFG_00059 1.4e-53 S Protein of unknown function (DUF3021)
JOFJPCFG_00061 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
JOFJPCFG_00063 7.8e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
JOFJPCFG_00064 4.6e-105 tag 3.2.2.20 L 3-methyladenine DNA glycosylase
JOFJPCFG_00065 3.8e-232 cinA 3.5.1.42 S Belongs to the CinA family
JOFJPCFG_00066 2.8e-197 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
JOFJPCFG_00067 2.3e-66 spxA_2 1.20.4.1 P Belongs to the ArsC family
JOFJPCFG_00072 2.6e-10
JOFJPCFG_00075 1.9e-07
JOFJPCFG_00080 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JOFJPCFG_00081 7.3e-236 pepS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
JOFJPCFG_00082 5.5e-36 XK27_02060 S Transglycosylase associated protein
JOFJPCFG_00083 4.5e-42 badR K DNA-binding transcription factor activity
JOFJPCFG_00084 7.8e-97 S reductase
JOFJPCFG_00085 4.9e-87 L Integrase core domain protein
JOFJPCFG_00087 1e-59 yocD 3.4.17.13 V carboxypeptidase activity
JOFJPCFG_00088 1.1e-89 yocD 3.4.17.13 V proteins, homologs of microcin C7 resistance protein MccF
JOFJPCFG_00090 2.8e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
JOFJPCFG_00091 1.7e-182 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JOFJPCFG_00092 6e-82 S Putative small multi-drug export protein
JOFJPCFG_00093 1.8e-75 ctsR K Belongs to the CtsR family
JOFJPCFG_00094 0.0 clpC O Belongs to the ClpA ClpB family
JOFJPCFG_00095 1.6e-126 dacA 3.4.16.4 M Belongs to the peptidase S11 family
JOFJPCFG_00096 1.4e-51 dacA 3.4.16.4 M Belongs to the peptidase S11 family
JOFJPCFG_00097 1.2e-230 dacA 3.4.16.4 M Belongs to the peptidase S11 family
JOFJPCFG_00098 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
JOFJPCFG_00099 1.4e-141 S SseB protein N-terminal domain
JOFJPCFG_00100 1.1e-112 cysE 2.3.1.30 E serine acetyltransferase
JOFJPCFG_00101 1.5e-258 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
JOFJPCFG_00102 4.2e-68 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
JOFJPCFG_00104 6.9e-133 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JOFJPCFG_00105 7e-92 yacP S RNA-binding protein containing a PIN domain
JOFJPCFG_00106 3.7e-154 degV S DegV family
JOFJPCFG_00107 3.2e-33 K helix-turn-helix
JOFJPCFG_00108 3.6e-182 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JOFJPCFG_00109 2e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
JOFJPCFG_00110 9.5e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
JOFJPCFG_00111 7.7e-20 EGP Major facilitator Superfamily
JOFJPCFG_00112 9.5e-37 EGP Major facilitator Superfamily
JOFJPCFG_00113 2e-42 tnp L Transposase
JOFJPCFG_00114 1.2e-35 tnp L Transposase
JOFJPCFG_00115 5.3e-44 capA M Bacterial capsule synthesis protein
JOFJPCFG_00116 7.4e-166 capA M Bacterial capsule synthesis protein
JOFJPCFG_00117 3.6e-39 gcvR T UPF0237 protein
JOFJPCFG_00118 5.1e-243 XK27_08635 S UPF0210 protein
JOFJPCFG_00119 1.2e-55 ais G Phosphoglycerate mutase
JOFJPCFG_00120 6.7e-24 ais G Phosphoglycerate mutase
JOFJPCFG_00121 7e-21 ais G alpha-ribazole phosphatase activity
JOFJPCFG_00122 4.7e-143 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
JOFJPCFG_00123 7.2e-101 acmA 3.2.1.17 NU amidase activity
JOFJPCFG_00124 1.9e-195 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
JOFJPCFG_00125 1.5e-71 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
JOFJPCFG_00126 4.9e-297 dnaK O Heat shock 70 kDa protein
JOFJPCFG_00127 4e-188 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
JOFJPCFG_00128 7.7e-140 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
JOFJPCFG_00129 3.1e-136 thiD 2.7.1.35, 2.7.1.49, 2.7.4.7 H phosphomethylpyrimidine kinase
JOFJPCFG_00130 7.4e-23 hmpT S membrane
JOFJPCFG_00137 1.5e-47 amiA E ABC transporter, substrate-binding protein, family 5
JOFJPCFG_00138 1.1e-144 L Transposase
JOFJPCFG_00139 1.8e-56 amd 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
JOFJPCFG_00140 4.2e-233 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
JOFJPCFG_00141 2.1e-83
JOFJPCFG_00142 1.6e-77 sigH K DNA-templated transcription, initiation
JOFJPCFG_00143 2.3e-148 ykuT M mechanosensitive ion channel
JOFJPCFG_00144 1.2e-220 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
JOFJPCFG_00145 4.8e-73 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
JOFJPCFG_00146 7.6e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
JOFJPCFG_00147 2.4e-83 XK27_03960 S Protein of unknown function (DUF3013)
JOFJPCFG_00148 1.8e-80 mutT3 3.6.1.13, 3.6.1.55 L NUDIX domain
JOFJPCFG_00149 2.2e-176 prmA J Ribosomal protein L11 methyltransferase
JOFJPCFG_00150 4.4e-135 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
JOFJPCFG_00151 1.1e-165 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
JOFJPCFG_00152 3.1e-185 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
JOFJPCFG_00153 6.9e-83 nrdI F Belongs to the NrdI family
JOFJPCFG_00154 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JOFJPCFG_00155 9.7e-74 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
JOFJPCFG_00156 5.2e-28 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
JOFJPCFG_00157 1.1e-65 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
JOFJPCFG_00158 7.9e-08 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
JOFJPCFG_00159 5e-39 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
JOFJPCFG_00160 1.7e-237 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JOFJPCFG_00161 1.2e-111 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
JOFJPCFG_00162 3.8e-111 fnr5 K Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
JOFJPCFG_00163 8.7e-199 yhjX P Major Facilitator
JOFJPCFG_00164 9.2e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
JOFJPCFG_00165 7.2e-93 V VanZ like family
JOFJPCFG_00168 1e-123 glnQ E abc transporter atp-binding protein
JOFJPCFG_00169 7.6e-275 glnP P ABC transporter
JOFJPCFG_00170 1.2e-152 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
JOFJPCFG_00171 2.6e-135 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
JOFJPCFG_00172 3.8e-186 tagO 2.7.8.33, 2.7.8.35 M transferase
JOFJPCFG_00173 1.2e-143 sufC O ABC-type transport system involved in Fe-S cluster assembly, ATPase component
JOFJPCFG_00174 1.4e-234 sufD O assembly protein SufD
JOFJPCFG_00175 3.8e-237 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JOFJPCFG_00176 2.1e-73 nifU C SUF system FeS assembly protein, NifU family
JOFJPCFG_00177 1.9e-272 sufB O assembly protein SufB
JOFJPCFG_00179 1.1e-10
JOFJPCFG_00180 1.9e-158 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
JOFJPCFG_00181 1.1e-181 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JOFJPCFG_00182 3.6e-222 EGP Major facilitator Superfamily
JOFJPCFG_00183 7.2e-69 adcR K transcriptional
JOFJPCFG_00184 1.8e-65 adcC 3.6.3.35 P ABC transporter, ATP-binding protein
JOFJPCFG_00185 6e-130 adcB P ABC transporter (Permease
JOFJPCFG_00186 4.8e-163 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
JOFJPCFG_00187 1.1e-27 ptsG 2.7.1.199, 2.7.1.208 G pts system
JOFJPCFG_00188 7.8e-24 ptsG 2.7.1.199, 2.7.1.208 G pts system
JOFJPCFG_00189 4.2e-90 ptsG 2.7.1.199, 2.7.1.208 G pts system
JOFJPCFG_00190 7.3e-157 ptsG 2.7.1.199, 2.7.1.208 G pts system
JOFJPCFG_00191 9.9e-25 rgfB 3.1.3.90 L Endonuclease/Exonuclease/phosphatase family
JOFJPCFG_00192 6.4e-75 rgfB 3.1.3.90 L Endonuclease/Exonuclease/phosphatase family
JOFJPCFG_00193 4.8e-257 pgi 5.3.1.9 G Belongs to the GPI family
JOFJPCFG_00194 1.9e-127 yeeN K transcriptional regulatory protein
JOFJPCFG_00195 3.7e-49 yajC U protein transport
JOFJPCFG_00196 1.1e-141 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JOFJPCFG_00197 1.7e-145 cdsA 2.7.7.41 S Belongs to the CDS family
JOFJPCFG_00198 7.2e-231 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
JOFJPCFG_00199 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
JOFJPCFG_00200 0.0 WQ51_06230 S ABC transporter substrate binding protein
JOFJPCFG_00201 5.2e-142 cmpC S abc transporter atp-binding protein
JOFJPCFG_00202 1.3e-42 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
JOFJPCFG_00203 6.9e-287 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
JOFJPCFG_00204 3.9e-15 L transposase activity
JOFJPCFG_00205 3.2e-10 L Transposase
JOFJPCFG_00206 7.8e-90 L Transposase and inactivated derivatives
JOFJPCFG_00209 1.1e-44
JOFJPCFG_00210 1.6e-52 S TM2 domain
JOFJPCFG_00211 1.6e-165 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
JOFJPCFG_00212 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
JOFJPCFG_00213 1.6e-24 secE U Belongs to the SecE SEC61-gamma family
JOFJPCFG_00214 8.4e-96 nusG K Participates in transcription elongation, termination and antitermination
JOFJPCFG_00215 2.3e-84 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I phosphatidate phosphatase activity
JOFJPCFG_00216 1.1e-53 cof Q phosphatase activity
JOFJPCFG_00217 4.7e-35 cof Q phosphatase activity
JOFJPCFG_00218 1.7e-103 glcR K transcriptional regulator (DeoR family)
JOFJPCFG_00219 2.7e-19 glcR K transcriptional regulator (DeoR family)
JOFJPCFG_00220 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
JOFJPCFG_00221 3.8e-40 K transcriptional
JOFJPCFG_00222 8.2e-69 S thiolester hydrolase activity
JOFJPCFG_00223 3.6e-137 S COG1073 Hydrolases of the alpha beta superfamily
JOFJPCFG_00224 1.3e-276 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JOFJPCFG_00225 2.1e-151 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
JOFJPCFG_00226 1e-75 yhaI L Membrane
JOFJPCFG_00227 1.7e-259 pepC 3.4.22.40 E aminopeptidase
JOFJPCFG_00228 2.5e-109 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
JOFJPCFG_00229 3.1e-95 ypsA S Belongs to the UPF0398 family
JOFJPCFG_00230 4.3e-50 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
JOFJPCFG_00231 4.3e-222 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
JOFJPCFG_00232 7.2e-288 mapZ D Early cell division protein that marks the future cell division site and supports proper FtsZ ring positioning
JOFJPCFG_00233 0.0 snf 2.7.11.1 L Superfamily II DNA RNA helicases, SNF2 family'
JOFJPCFG_00234 2.5e-23
JOFJPCFG_00235 1.5e-255 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
JOFJPCFG_00236 6e-82 XK27_09675 K -acetyltransferase
JOFJPCFG_00237 0.0 mltG ADL Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JOFJPCFG_00238 1.6e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
JOFJPCFG_00240 2.9e-27 L Integrase core domain protein
JOFJPCFG_00241 2.1e-12 L Integrase core domain protein
JOFJPCFG_00242 2.9e-165 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
JOFJPCFG_00243 2.7e-45 acyP 3.6.1.7 C Belongs to the acylphosphatase family
JOFJPCFG_00244 1.1e-130 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JOFJPCFG_00245 6.1e-93 XK27_09705 6.1.1.14 S HD superfamily hydrolase
JOFJPCFG_00246 1.5e-97 ybhL S Belongs to the BI1 family
JOFJPCFG_00248 3.6e-243 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
JOFJPCFG_00249 7.6e-36 yneF S UPF0154 protein
JOFJPCFG_00250 3.8e-148 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
JOFJPCFG_00251 3.2e-186 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
JOFJPCFG_00252 7.9e-99 XK27_09740 S Phosphoesterase
JOFJPCFG_00253 5.4e-86 ykuL S CBS domain
JOFJPCFG_00254 7.5e-138 xerD L tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site
JOFJPCFG_00255 1.2e-121 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JOFJPCFG_00256 1.1e-98 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JOFJPCFG_00257 1.6e-140 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
JOFJPCFG_00258 8e-41 yidD S Could be involved in insertion of integral membrane proteins into the membrane
JOFJPCFG_00259 1.2e-258 trkH P Cation transport protein
JOFJPCFG_00260 5.9e-247 trkA P Potassium transporter peripheral membrane component
JOFJPCFG_00261 1.8e-95 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
JOFJPCFG_00262 3.2e-90 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
JOFJPCFG_00263 1.5e-94 bcrC 3.6.1.27 I Membrane-associated phospholipid phosphatase
JOFJPCFG_00264 2.5e-161 K sequence-specific DNA binding
JOFJPCFG_00265 5.5e-33 V protein secretion by the type I secretion system
JOFJPCFG_00266 6.2e-88 V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
JOFJPCFG_00267 7.3e-63 comA V protein secretion by the type I secretion system
JOFJPCFG_00268 1.5e-68 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
JOFJPCFG_00269 1.3e-42 yhaI L Membrane
JOFJPCFG_00270 8.6e-130 S Domain of unknown function (DUF4173)
JOFJPCFG_00271 6.8e-95 ureI S AmiS/UreI family transporter
JOFJPCFG_00272 7.6e-46 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
JOFJPCFG_00273 7.8e-54 ureB 3.5.1.5 E Belongs to the urease beta subunit family
JOFJPCFG_00274 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
JOFJPCFG_00275 6.6e-78 ureE O enzyme active site formation
JOFJPCFG_00276 6.9e-130 ureF O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
JOFJPCFG_00277 6.2e-111 ureG KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
JOFJPCFG_00278 5.8e-160 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
JOFJPCFG_00279 3.5e-177 cbiM P PDGLE domain
JOFJPCFG_00280 6e-135 P cobalt transport protein
JOFJPCFG_00281 3.1e-130 cbiO P ABC transporter
JOFJPCFG_00282 5.3e-145 ET amino acid transport
JOFJPCFG_00283 3.7e-165 metQ M Belongs to the NlpA lipoprotein family
JOFJPCFG_00284 1.2e-85 dapE 3.5.1.18 E COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases
JOFJPCFG_00285 1.6e-61 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase activity
JOFJPCFG_00286 4.1e-62 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase activity
JOFJPCFG_00287 1.5e-189 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JOFJPCFG_00288 3e-98 metI P ABC transporter (Permease
JOFJPCFG_00289 6.7e-210 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
JOFJPCFG_00290 3.2e-78 salL 2.5.1.63, 2.5.1.94 S S-adenosyl-l-methionine hydroxide adenosyltransferase
JOFJPCFG_00291 2.3e-45 salL 2.5.1.63, 2.5.1.94 S S-adenosyl-l-methionine hydroxide adenosyltransferase
JOFJPCFG_00292 1.2e-26 P Psort location CytoplasmicMembrane, score
JOFJPCFG_00293 2.6e-36 S UPF0397 protein
JOFJPCFG_00294 4.6e-311 ykoD P abc transporter atp-binding protein
JOFJPCFG_00295 1.9e-147 cbiQ P cobalt transport
JOFJPCFG_00296 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JOFJPCFG_00297 1.4e-11 ulaG S L-ascorbate 6-phosphate lactonase
JOFJPCFG_00298 1.4e-121 ktrA P COG0569 K transport systems, NAD-binding component
JOFJPCFG_00299 9.8e-242 P COG0168 Trk-type K transport systems, membrane components
JOFJPCFG_00300 3.1e-130 rsmG 2.1.1.170 J Ribosomal RNA small subunit methyltransferase G
JOFJPCFG_00301 4.7e-91 yceD K metal-binding, possibly nucleic acid-binding protein
JOFJPCFG_00302 1.8e-122 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
JOFJPCFG_00303 2.8e-282 T PhoQ Sensor
JOFJPCFG_00304 2.8e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JOFJPCFG_00305 5e-218 dnaB L Replication initiation and membrane attachment
JOFJPCFG_00306 4e-167 dnaI L Primosomal protein DnaI
JOFJPCFG_00307 1.7e-246 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
JOFJPCFG_00308 4.7e-22 P ABC transporter transmembrane region
JOFJPCFG_00309 5.9e-42 L Transposase
JOFJPCFG_00310 9.5e-231 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JOFJPCFG_00311 6.5e-63 manO S protein conserved in bacteria
JOFJPCFG_00312 2.1e-168 manN G PTS system mannose fructose sorbose family IID component
JOFJPCFG_00313 2.3e-116 manM G pts system
JOFJPCFG_00314 4.1e-181 manL 2.7.1.191 G pts system
JOFJPCFG_00315 4.7e-77 XK27_00940 1.2.1.70, 3.5.1.9 S Metal-dependent hydrolase
JOFJPCFG_00316 5.8e-39 XK27_00940 1.2.1.70, 3.5.1.9 S Metal-dependent hydrolase
JOFJPCFG_00317 4.3e-152 yitU 3.1.3.104 S hydrolases of the HAD superfamily
JOFJPCFG_00318 6.2e-247 pbuO S permease
JOFJPCFG_00319 1.4e-77 ydiB 2.7.1.221, 5.1.1.1 M ATPase or kinase
JOFJPCFG_00320 3.2e-92 XK27_05885 2.3.1.82 M Acetyltransferase GNAT Family
JOFJPCFG_00321 2.5e-220 brpA K Transcriptional
JOFJPCFG_00322 1.3e-79 rimP S Required for maturation of 30S ribosomal subunits
JOFJPCFG_00323 1.5e-211 nusA K Participates in both transcription termination and antitermination
JOFJPCFG_00324 1e-47 ylxR K Nucleic-acid-binding protein implicated in transcription termination
JOFJPCFG_00325 1.4e-41 ylxQ J ribosomal protein
JOFJPCFG_00326 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
JOFJPCFG_00327 1.7e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JOFJPCFG_00328 9.1e-44 yvdD 3.2.2.10 S cytokinin biosynthetic process
JOFJPCFG_00329 1.5e-25 yvdD 3.2.2.10 S cytokinin biosynthetic process
JOFJPCFG_00330 1.9e-275 murE 6.3.2.13, 6.3.2.7 M to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JOFJPCFG_00331 7.7e-283 ytgP S Membrane protein involved in the export of O-antigen and teichoic acid
JOFJPCFG_00332 5.6e-95 pacL 3.6.3.8, 3.6.3.9 P cation transport ATPase
JOFJPCFG_00333 5.3e-198 metB 2.5.1.48, 4.4.1.8 E cystathionine
JOFJPCFG_00334 1.6e-221 malY 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
JOFJPCFG_00335 1.4e-09 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 G Belongs to the glycosyl hydrolase 68 family
JOFJPCFG_00336 1.3e-111 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
JOFJPCFG_00337 2.9e-105 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
JOFJPCFG_00338 8.3e-73 ylbF S Belongs to the UPF0342 family
JOFJPCFG_00339 7.1e-46 ylbG S UPF0298 protein
JOFJPCFG_00340 5.9e-211 livJ E COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component
JOFJPCFG_00341 9.4e-145 livH E Belongs to the binding-protein-dependent transport system permease family
JOFJPCFG_00342 1e-136 livM E Belongs to the binding-protein-dependent transport system permease family
JOFJPCFG_00343 9.6e-138 livG E COG0411 ABC-type branched-chain amino acid transport systems, ATPase component
JOFJPCFG_00344 1.8e-122 livF E COG0410 ABC-type branched-chain amino acid transport systems, ATPase component
JOFJPCFG_00345 2.3e-69 acuB S IMP dehydrogenase activity
JOFJPCFG_00346 4.7e-42 acuB S IMP dehydrogenase activity
JOFJPCFG_00347 1.4e-167 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
JOFJPCFG_00348 1.4e-110 yvyE 3.4.13.9 S YigZ family
JOFJPCFG_00349 3.5e-252 comFA L Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
JOFJPCFG_00350 3.4e-123 comFC S Competence protein
JOFJPCFG_00351 8e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JOFJPCFG_00352 6.2e-50 L Transposase and inactivated derivatives IS30 family
JOFJPCFG_00359 1.7e-165 ppaC 3.6.1.1 C inorganic pyrophosphatase
JOFJPCFG_00360 6.4e-108 S Domain of unknown function (DUF1803)
JOFJPCFG_00361 7.8e-102 ygaC J Belongs to the UPF0374 family
JOFJPCFG_00362 7.3e-133 recX 2.4.1.337 GT4 S Regulatory protein RecX
JOFJPCFG_00363 4e-259 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JOFJPCFG_00364 3e-192 asnA 6.3.1.1 E aspartate--ammonia ligase
JOFJPCFG_00365 2.4e-256 lysC 2.7.2.4 E Belongs to the aspartokinase family
JOFJPCFG_00366 4.3e-115 S Haloacid dehalogenase-like hydrolase
JOFJPCFG_00367 2.4e-139 phaB 5.3.3.14, 5.3.3.18 I Belongs to the enoyl-CoA hydratase isomerase family
JOFJPCFG_00368 1.2e-71 marR K Transcriptional regulator, MarR family
JOFJPCFG_00369 2.3e-173 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JOFJPCFG_00370 9.7e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
JOFJPCFG_00371 8.3e-171 fabK 1.3.1.9 S 2-Nitropropane dioxygenase
JOFJPCFG_00372 2.5e-164 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
JOFJPCFG_00373 1.6e-126 IQ reductase
JOFJPCFG_00374 7.5e-233 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
JOFJPCFG_00375 9.1e-57 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
JOFJPCFG_00376 1.5e-71 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
JOFJPCFG_00377 1.7e-257 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
JOFJPCFG_00378 1.6e-160 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
JOFJPCFG_00379 3e-139 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
JOFJPCFG_00380 4.7e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
JOFJPCFG_00381 5.1e-205 rny D Endoribonuclease that initiates mRNA decay
JOFJPCFG_00382 1.2e-21
JOFJPCFG_00383 2.3e-112 fruR K transcriptional
JOFJPCFG_00384 5e-17 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
JOFJPCFG_00385 6.1e-123 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
JOFJPCFG_00386 2.7e-55 fruA 2.7.1.202 G phosphotransferase system
JOFJPCFG_00387 5e-49 fruA 2.7.1.202 GT PTS system, Lactose/Cellobiose specific IIB subunit
JOFJPCFG_00388 4.1e-185 fruA 2.7.1.202 G phosphotransferase system
JOFJPCFG_00389 4.2e-261 gor 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JOFJPCFG_00390 2.8e-243 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
JOFJPCFG_00392 6.1e-213 iscS2 2.8.1.7 E Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes
JOFJPCFG_00393 1.9e-228 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JOFJPCFG_00394 4.2e-294 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
JOFJPCFG_00395 6.1e-257 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
JOFJPCFG_00396 1.1e-38 2.3.1.128 K acetyltransferase
JOFJPCFG_00397 4.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
JOFJPCFG_00398 1.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
JOFJPCFG_00399 6.1e-131 ydaF_2 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JOFJPCFG_00400 1.9e-62 WQ51_03320 S cog cog4835
JOFJPCFG_00401 7.1e-87 XK27_08360 T EDD domain protein, DegV family
JOFJPCFG_00402 7.4e-138 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
JOFJPCFG_00403 9.6e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
JOFJPCFG_00404 0.0 yfmR S abc transporter atp-binding protein
JOFJPCFG_00405 4.7e-24 U response to pH
JOFJPCFG_00406 1e-107 3.6.1.13, 3.6.1.55 F AdP-ribose pyrophosphatase
JOFJPCFG_00407 2.2e-31 nadD 2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55 H adenylyltransferase
JOFJPCFG_00408 9.2e-86 nadD 2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55 H adenylyltransferase
JOFJPCFG_00409 6.9e-256 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
JOFJPCFG_00410 2.3e-69 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
JOFJPCFG_00411 9.4e-77 K DNA-binding transcription factor activity
JOFJPCFG_00412 0.0 lmrA1 V abc transporter atp-binding protein
JOFJPCFG_00413 0.0 lmrA2 V abc transporter atp-binding protein
JOFJPCFG_00414 6e-33 K Acetyltransferase (GNAT) family
JOFJPCFG_00415 5.8e-121 sptS 2.7.13.3 T Histidine kinase
JOFJPCFG_00416 4.9e-131 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
JOFJPCFG_00417 1.3e-91 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
JOFJPCFG_00418 4.5e-160 cvfB S Protein conserved in bacteria
JOFJPCFG_00419 7.4e-35 yozE S Belongs to the UPF0346 family
JOFJPCFG_00420 9.1e-55 usp 3.5.1.28 CBM50 S CHAP domain
JOFJPCFG_00421 4.8e-146 L Transposase
JOFJPCFG_00422 9.1e-64 rlpA M LysM domain protein
JOFJPCFG_00423 2.3e-190 phoH T phosphate starvation-inducible protein PhoH
JOFJPCFG_00427 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JOFJPCFG_00428 1.3e-162 K transcriptional regulator (lysR family)
JOFJPCFG_00429 1.8e-186 coiA 3.6.4.12 S Competence protein
JOFJPCFG_00430 0.0 pepF E oligoendopeptidase F
JOFJPCFG_00431 1.5e-124 yrrM 2.1.1.104 S O-Methyltransferase
JOFJPCFG_00432 5.1e-167 prsA 3.1.3.16, 5.2.1.8 O peptidyl-prolyl cis-trans isomerase activity
JOFJPCFG_00433 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JOFJPCFG_00434 4.8e-132 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
JOFJPCFG_00435 4e-30 vanY 3.4.17.14, 3.5.1.28 M D-alanyl-D-alanine carboxypeptidase
JOFJPCFG_00436 1.6e-88 3.4.17.14, 3.5.1.28 NU amidase activity
JOFJPCFG_00437 2.6e-146 cnhA 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
JOFJPCFG_00438 4.5e-227 mtnE 2.6.1.83 E mutations do not affect methionine salvage in vivo however
JOFJPCFG_00439 1.5e-191 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
JOFJPCFG_00440 1.5e-222 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
JOFJPCFG_00441 1.8e-128 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
JOFJPCFG_00442 1.1e-209 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
JOFJPCFG_00443 5.5e-129 yxkH G deacetylase
JOFJPCFG_00444 4e-237 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
JOFJPCFG_00445 4.1e-153 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
JOFJPCFG_00446 9.1e-148 rarD S Transporter
JOFJPCFG_00447 1.4e-14 T peptidase
JOFJPCFG_00448 8.9e-14 coiA 3.6.4.12 S Competence protein
JOFJPCFG_00449 6.4e-105 S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JOFJPCFG_00450 1.6e-51 2.3.1.128, 5.2.1.8 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JOFJPCFG_00451 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
JOFJPCFG_00452 1.2e-15 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JOFJPCFG_00453 3.6e-123 atpB C it plays a direct role in the translocation of protons across the membrane
JOFJPCFG_00454 5.6e-78 atpF C ATP synthase F(0) sector subunit b
JOFJPCFG_00455 1.3e-85 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JOFJPCFG_00456 1.1e-278 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
JOFJPCFG_00457 2.5e-158 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JOFJPCFG_00458 6.1e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JOFJPCFG_00459 1.5e-66 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
JOFJPCFG_00460 2.8e-230 ftsW D Belongs to the SEDS family
JOFJPCFG_00461 9.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JOFJPCFG_00462 1.4e-136 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
JOFJPCFG_00463 1.7e-111 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JOFJPCFG_00464 1.4e-161 holB 2.7.7.7 L dna polymerase iii
JOFJPCFG_00465 2.3e-134 yaaT S stage 0 sporulation protein
JOFJPCFG_00466 9.5e-55 yabA L Involved in initiation control of chromosome replication
JOFJPCFG_00467 2.7e-160 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JOFJPCFG_00468 3.7e-232 amt P Ammonium Transporter
JOFJPCFG_00469 2.3e-51 glnB K Belongs to the P(II) protein family
JOFJPCFG_00470 2.1e-104 mur1 NU mannosyl-glycoprotein
JOFJPCFG_00471 5.5e-147 XK27_04800 S Sucrose-6F-phosphate phosphohydrolase
JOFJPCFG_00472 2.2e-113 nptA P COG1283 Na phosphate symporter
JOFJPCFG_00473 2.3e-220 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
JOFJPCFG_00474 1.3e-51
JOFJPCFG_00475 7.5e-26
JOFJPCFG_00476 2.1e-61
JOFJPCFG_00477 2.3e-43 S membrane
JOFJPCFG_00478 4.8e-176 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
JOFJPCFG_00479 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
JOFJPCFG_00480 4.5e-39 ynzC S UPF0291 protein
JOFJPCFG_00481 5.1e-254 cycA E permease
JOFJPCFG_00482 1.9e-09 uvrX 2.7.7.7 L impB/mucB/samB family
JOFJPCFG_00483 1.8e-23 pts33BCA G pts system
JOFJPCFG_00484 8.3e-70 pts33BCA G pts system
JOFJPCFG_00485 1.4e-178 pts33BCA G pts system
JOFJPCFG_00486 7.1e-141 ppiA 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JOFJPCFG_00490 1.5e-166 fhuR K transcriptional regulator (lysR family)
JOFJPCFG_00491 2.6e-77 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
JOFJPCFG_00492 8.5e-162 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
JOFJPCFG_00493 4e-87 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
JOFJPCFG_00494 1.7e-224 pyrP F uracil Permease
JOFJPCFG_00495 5e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
JOFJPCFG_00496 3.9e-209 carA 6.3.5.5 F carbamoyl-phosphate synthetase glutamine chain
JOFJPCFG_00497 0.0 carB 6.3.5.5 F carbamoyl-phosphate synthetase ammonia chain
JOFJPCFG_00498 5.3e-128 2.1.1.223 S Putative SAM-dependent methyltransferase
JOFJPCFG_00499 2e-75 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
JOFJPCFG_00500 9.6e-51 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
JOFJPCFG_00501 0.0 mdlB V abc transporter atp-binding protein
JOFJPCFG_00502 0.0 lmrA V abc transporter atp-binding protein
JOFJPCFG_00503 1.1e-197 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
JOFJPCFG_00504 2.3e-122 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
JOFJPCFG_00505 1.8e-213 2.7.13.3 T signal transduction protein with a C-terminal ATPase domain
JOFJPCFG_00506 1.2e-77 rr02 KT response regulator
JOFJPCFG_00507 4.8e-168 V ABC transporter
JOFJPCFG_00508 5.4e-122 sagI S ABC-2 type transporter
JOFJPCFG_00509 1.3e-195 yceA S Belongs to the UPF0176 family
JOFJPCFG_00510 8e-28 XK27_00085 K Transcriptional
JOFJPCFG_00511 6e-24
JOFJPCFG_00512 4.5e-143 deoD_1 2.4.2.3 F Phosphorylase superfamily
JOFJPCFG_00513 1.6e-112 S VIT family
JOFJPCFG_00514 3.7e-131 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
JOFJPCFG_00515 9.1e-217 hipO 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
JOFJPCFG_00516 3.4e-17 ald 1.4.1.1 E alanine dehydrogenase activity
JOFJPCFG_00517 3.6e-249 merA 1.16.1.1 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JOFJPCFG_00518 5.2e-98 GBS0088 J protein conserved in bacteria
JOFJPCFG_00519 6.3e-141 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
JOFJPCFG_00520 9e-170 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
JOFJPCFG_00521 1.8e-176 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I GHMP kinases N terminal domain
JOFJPCFG_00522 1.1e-189 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
JOFJPCFG_00523 3.6e-252 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JOFJPCFG_00524 2.2e-96 nudF 3.6.1.13 L AdP-ribose pyrophosphatase
JOFJPCFG_00525 8.4e-17
JOFJPCFG_00526 5.9e-118 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JOFJPCFG_00528 1.1e-28 U protein secretion
JOFJPCFG_00529 5.3e-46 U protein secretion
JOFJPCFG_00530 1.3e-09 U protein secretion
JOFJPCFG_00531 1.9e-189 dgs 2.4.1.208 GT4 M Glycosyltransferase, group 1 family protein
JOFJPCFG_00532 1.3e-246 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
JOFJPCFG_00533 9.2e-20 XK27_13030
JOFJPCFG_00534 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JOFJPCFG_00535 5.3e-170 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
JOFJPCFG_00536 8.9e-164 S Protein of unknown function (DUF3114)
JOFJPCFG_00537 3.6e-22 S Protein of unknown function (DUF3114)
JOFJPCFG_00538 3.4e-118 yqfA K protein, Hemolysin III
JOFJPCFG_00539 1e-25 K hmm pf08876
JOFJPCFG_00540 4e-229 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
JOFJPCFG_00541 1.1e-217 mvaS 2.3.3.10 I synthase
JOFJPCFG_00542 2.2e-167 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
JOFJPCFG_00543 3.4e-91 folA 1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JOFJPCFG_00544 9.7e-22
JOFJPCFG_00545 2e-225 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
JOFJPCFG_00546 3e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
JOFJPCFG_00547 2.2e-175 mmuP E amino acid
JOFJPCFG_00548 6.1e-174 mmuM 1.5.1.20, 2.1.1.10 H Homocysteine
JOFJPCFG_00549 1.4e-29 S Domain of unknown function (DUF1912)
JOFJPCFG_00550 3.7e-15 L Helix-hairpin-helix DNA-binding motif class 1
JOFJPCFG_00551 7.1e-102 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
JOFJPCFG_00552 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
JOFJPCFG_00553 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
JOFJPCFG_00554 3.4e-199 ilvE 2.6.1.42 E Aminotransferase
JOFJPCFG_00555 1.1e-15 S Protein of unknown function (DUF2969)
JOFJPCFG_00558 4.2e-204 rpsA 1.17.7.4 J ribosomal protein S1
JOFJPCFG_00561 1.7e-29 S Domain of Unknown Function with PDB structure (DUF3862)
JOFJPCFG_00562 1.5e-30 S Domain of Unknown Function with PDB structure (DUF3862)
JOFJPCFG_00563 3.7e-70 M Pfam SNARE associated Golgi protein
JOFJPCFG_00564 1.3e-232 murN 2.3.2.10, 2.3.2.16 V FemAB family
JOFJPCFG_00565 9.8e-68 S oxidoreductase
JOFJPCFG_00566 6.9e-47 XK27_09445 S Domain of unknown function (DUF1827)
JOFJPCFG_00567 5.7e-85 mutT 3.5.4.33, 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
JOFJPCFG_00568 0.0 clpE O Belongs to the ClpA ClpB family
JOFJPCFG_00569 2.4e-181 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
JOFJPCFG_00570 5.1e-34 ykuJ S protein conserved in bacteria
JOFJPCFG_00571 2.9e-117 WQ51_01820 P Binding-protein-dependent transport system inner membrane component
JOFJPCFG_00572 1.1e-130 glnQ 3.6.3.21 E abc transporter atp-binding protein
JOFJPCFG_00573 1e-76 feoA P FeoA domain protein
JOFJPCFG_00574 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
JOFJPCFG_00575 1.5e-07
JOFJPCFG_00576 1.2e-32 yugF I carboxylic ester hydrolase activity
JOFJPCFG_00577 1.5e-23 I Alpha/beta hydrolase family
JOFJPCFG_00578 1.1e-153 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
JOFJPCFG_00579 9.5e-147 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JOFJPCFG_00580 0.0 pbp2b 3.4.16.4 M penicillin-binding protein
JOFJPCFG_00581 3.8e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JOFJPCFG_00582 2.9e-44 licT K transcriptional antiterminator
JOFJPCFG_00583 1.7e-51 licT K transcriptional antiterminator
JOFJPCFG_00584 5.9e-88 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JOFJPCFG_00585 6.4e-64 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
JOFJPCFG_00586 1.3e-165 era M An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JOFJPCFG_00587 1.2e-154 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
JOFJPCFG_00588 1.6e-103 coaE 2.7.1.24, 3.2.2.23, 4.2.99.18 GH23 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
JOFJPCFG_00589 1.1e-220 mdtG EGP Major facilitator Superfamily
JOFJPCFG_00590 2e-33 secG U Preprotein translocase subunit SecG
JOFJPCFG_00591 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
JOFJPCFG_00592 1.1e-80 smpB O the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
JOFJPCFG_00593 2.1e-276 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JOFJPCFG_00594 1.7e-63 yugI 5.3.1.9 J RNA binding protein, contains ribosomal protein S1 domain
JOFJPCFG_00595 4.6e-210 pepQ 3.4.13.9 E Belongs to the peptidase M24B family
JOFJPCFG_00596 3.4e-183 ccpA K Catabolite control protein A
JOFJPCFG_00597 2e-26 yyaQ S YjbR
JOFJPCFG_00598 1.1e-141 yyaQ S YjbR
JOFJPCFG_00599 1.1e-206 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
JOFJPCFG_00600 1.3e-78 yueI S Protein of unknown function (DUF1694)
JOFJPCFG_00601 7.4e-247 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
JOFJPCFG_00602 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
JOFJPCFG_00603 6.9e-220 ywbD 2.1.1.191 J Methyltransferase
JOFJPCFG_00604 1.9e-121 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
JOFJPCFG_00605 2.4e-161 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JOFJPCFG_00606 3.8e-201 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
JOFJPCFG_00607 2.2e-218 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
JOFJPCFG_00608 2.4e-206 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
JOFJPCFG_00609 3.2e-53 yheA S Belongs to the UPF0342 family
JOFJPCFG_00610 3.3e-172 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
JOFJPCFG_00611 9.2e-234 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
JOFJPCFG_00612 1.7e-87 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JOFJPCFG_00613 2.3e-153 pheA 4.2.1.51 E Prephenate dehydratase
JOFJPCFG_00614 2e-245 msrR K Transcriptional regulator
JOFJPCFG_00615 1.1e-200 I acyl-CoA dehydrogenase
JOFJPCFG_00616 1.7e-96 mip S hydroperoxide reductase activity
JOFJPCFG_00617 6.5e-254 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JOFJPCFG_00618 6.2e-106
JOFJPCFG_00619 1.1e-30 K Cro/C1-type HTH DNA-binding domain
JOFJPCFG_00620 4.6e-30 dam 2.1.1.72 L D12 class N6 adenine-specific DNA methyltransferase
JOFJPCFG_00621 1.8e-35 estA E GDSL-like Lipase/Acylhydrolase
JOFJPCFG_00622 1.2e-93
JOFJPCFG_00623 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
JOFJPCFG_00624 1.1e-172 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JOFJPCFG_00625 3.1e-53 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JOFJPCFG_00626 1.2e-183 S CRISPR-associated protein Csn2 subfamily St
JOFJPCFG_00627 3.5e-146 ycgQ S TIGR03943 family
JOFJPCFG_00628 3.5e-155 XK27_03015 S permease
JOFJPCFG_00630 0.0 yhgF K Transcriptional accessory protein
JOFJPCFG_00631 2.1e-84 ydcK S Belongs to the SprT family
JOFJPCFG_00632 2.4e-40 pspC KT PspC domain
JOFJPCFG_00633 6.8e-170 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
JOFJPCFG_00634 4e-147 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JOFJPCFG_00636 5.5e-69 ytxH S General stress protein
JOFJPCFG_00638 3e-178 yegQ O Peptidase U32
JOFJPCFG_00639 7.5e-252 yegQ O Peptidase U32
JOFJPCFG_00640 2e-49 S CHY zinc finger
JOFJPCFG_00641 2.7e-86 bioY S biotin synthase
JOFJPCFG_00643 1.1e-33 XK27_12190 S protein conserved in bacteria
JOFJPCFG_00644 1.9e-110 mntH P H( )-stimulated, divalent metal cation uptake system
JOFJPCFG_00645 3.1e-10
JOFJPCFG_00646 1.4e-63 nudG 3.6.1.55, 3.6.1.65 L Belongs to the Nudix hydrolase family
JOFJPCFG_00647 1.5e-53 L helicase
JOFJPCFG_00648 2.2e-287 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
JOFJPCFG_00649 7.6e-159 M LysM domain
JOFJPCFG_00650 7.6e-16
JOFJPCFG_00651 7.5e-174 S hydrolase
JOFJPCFG_00652 5.1e-116 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase
JOFJPCFG_00653 7.9e-82 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JOFJPCFG_00654 2.6e-148 XK27_00880 3.5.1.28 M Glycosyl hydrolase, family 25
JOFJPCFG_00655 2.7e-27 P Hemerythrin HHE cation binding domain protein
JOFJPCFG_00656 6.1e-114 1.14.14.5 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JOFJPCFG_00657 1.7e-10 MA20_36090 S Protein of unknown function (DUF2974)
JOFJPCFG_00658 1.2e-47 MA20_36090 S Protein of unknown function (DUF2974)
JOFJPCFG_00659 5.4e-113 sdh 1.1.1.276, 1.1.1.313, 1.1.1.381 S Belongs to the short-chain dehydrogenases reductases (SDR) family
JOFJPCFG_00660 0.0 hsdR 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
JOFJPCFG_00661 2.2e-105 hsdS 3.1.21.3 V type I restriction modification DNA specificity domain protein
JOFJPCFG_00662 7.3e-130 S Protein conserved in bacteria
JOFJPCFG_00663 1.4e-303 hsdM 2.1.1.72 V type I restriction-modification system
JOFJPCFG_00664 7.1e-30 S PD-(D/E)XK nuclease family transposase
JOFJPCFG_00665 1.2e-169 spd F DNA RNA non-specific endonuclease
JOFJPCFG_00666 5.9e-92 lemA S LemA family
JOFJPCFG_00667 1.2e-142 htpX O Belongs to the peptidase M48B family
JOFJPCFG_00668 4.2e-75 S Psort location CytoplasmicMembrane, score
JOFJPCFG_00669 6.2e-56 S Domain of unknown function (DUF4430)
JOFJPCFG_00670 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
JOFJPCFG_00671 3.2e-184 holA 2.7.7.7 L DNA polymerase III delta subunit
JOFJPCFG_00672 4.2e-112 sodA 1.15.1.1 C radicals which are normally produced within the cells and which are toxic to biological systems
JOFJPCFG_00673 5.9e-178 3.5.2.6 V D-alanyl-D-alanine carboxypeptidase
JOFJPCFG_00674 3e-116 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
JOFJPCFG_00675 1.3e-90 dps P Belongs to the Dps family
JOFJPCFG_00676 4.4e-79 perR P Belongs to the Fur family
JOFJPCFG_00677 8.4e-28 yqgQ S protein conserved in bacteria
JOFJPCFG_00678 8.6e-176 glk 2.7.1.2 G Glucokinase
JOFJPCFG_00679 0.0 typA T GTP-binding protein TypA
JOFJPCFG_00681 2.1e-252 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JOFJPCFG_00682 1.3e-201 murG 2.4.1.227 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JOFJPCFG_00683 1.1e-171 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
JOFJPCFG_00684 1.8e-251 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
JOFJPCFG_00685 2e-236 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JOFJPCFG_00686 8.7e-122 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JOFJPCFG_00687 4.4e-95 sepF D cell septum assembly
JOFJPCFG_00688 1.2e-34 yggT D integral membrane protein
JOFJPCFG_00689 1.5e-121 ylmH T S4 RNA-binding domain
JOFJPCFG_00690 8.7e-135 divIVA D Cell division protein DivIVA
JOFJPCFG_00691 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JOFJPCFG_00692 1.9e-09
JOFJPCFG_00693 1e-229 mntH P Mn2 and Fe2 transporters of the NRAMP family
JOFJPCFG_00694 2e-45 rpmE2 J 50S ribosomal protein L31
JOFJPCFG_00695 2.2e-176 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
JOFJPCFG_00696 1.5e-177 nrnA 3.1.13.3, 3.1.3.7 S domain protein
JOFJPCFG_00697 8.9e-155 gst O Glutathione S-transferase
JOFJPCFG_00698 3.3e-186 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
JOFJPCFG_00699 2.4e-112 tdk 2.7.1.21 F thymidine kinase
JOFJPCFG_00700 3e-193 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JOFJPCFG_00701 6.8e-153 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
JOFJPCFG_00702 7.4e-109 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
JOFJPCFG_00703 5.8e-233 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JOFJPCFG_00704 3.9e-176 ndpA S 37-kD nucleoid-associated bacterial protein
JOFJPCFG_00705 7.8e-106 pvaA M lytic transglycosylase activity
JOFJPCFG_00706 0.0 yfiB1 V abc transporter atp-binding protein
JOFJPCFG_00707 0.0 XK27_10035 V abc transporter atp-binding protein
JOFJPCFG_00708 1.6e-09 S D-Ala-teichoic acid biosynthesis protein
JOFJPCFG_00709 1.1e-297 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JOFJPCFG_00710 4.6e-238 dltB M Membrane protein involved in D-alanine export
JOFJPCFG_00711 1.7e-35 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JOFJPCFG_00712 5.2e-229 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
JOFJPCFG_00713 2.4e-33 L Integrase core domain protein
JOFJPCFG_00714 4.7e-31 L transposition
JOFJPCFG_00715 3.2e-10 L Transposase
JOFJPCFG_00716 0.0 3.6.3.8 P cation transport ATPase
JOFJPCFG_00717 0.0 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH component I
JOFJPCFG_00719 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JOFJPCFG_00720 7.3e-166 metF 1.5.1.20 C reductase
JOFJPCFG_00721 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
JOFJPCFG_00722 6.4e-94 panT S ECF transporter, substrate-specific component
JOFJPCFG_00723 2.8e-91 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JOFJPCFG_00724 1.2e-118 coaB 4.1.1.36, 6.3.2.5 H Phosphopantothenate-cysteine ligase
JOFJPCFG_00725 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
JOFJPCFG_00726 1.2e-21 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
JOFJPCFG_00727 1.6e-55 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
JOFJPCFG_00728 4.3e-41 T PhoQ Sensor
JOFJPCFG_00729 1.6e-126 T PhoQ Sensor
JOFJPCFG_00730 2.1e-30 rpsT J rRNA binding
JOFJPCFG_00731 1.9e-172 coaA 2.7.1.33 F Pantothenic acid kinase
JOFJPCFG_00732 1.8e-107 rsmC 2.1.1.172 J Methyltransferase small domain protein
JOFJPCFG_00733 1.2e-57 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
JOFJPCFG_00734 8.6e-97 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
JOFJPCFG_00735 1.4e-22 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
JOFJPCFG_00736 4e-63 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
JOFJPCFG_00737 1.3e-69 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
JOFJPCFG_00738 9.5e-192 tcsA S ABC-type transport system, periplasmic component surface lipoprotein
JOFJPCFG_00739 3.7e-282 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
JOFJPCFG_00740 4.7e-191 yufP S Belongs to the binding-protein-dependent transport system permease family
JOFJPCFG_00741 1.8e-170 yufQ S Belongs to the binding-protein-dependent transport system permease family
JOFJPCFG_00742 1.2e-120 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
JOFJPCFG_00743 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
JOFJPCFG_00744 8.9e-81 ypmB S Protein conserved in bacteria
JOFJPCFG_00745 7.2e-217 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
JOFJPCFG_00746 1.3e-262 asnS 6.1.1.22 J Catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
JOFJPCFG_00747 2e-17
JOFJPCFG_00748 3e-63 tdcF 3.5.99.10 J endoribonuclease L-PSP
JOFJPCFG_00749 1.5e-123 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
JOFJPCFG_00750 2e-82 queD 4.1.2.50, 4.2.3.12 H synthase
JOFJPCFG_00751 8.4e-136 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
JOFJPCFG_00752 6.5e-95 queF 1.7.1.13 S Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily
JOFJPCFG_00753 3.8e-19 D nuclear chromosome segregation
JOFJPCFG_00754 2.9e-70 yejC S cyclic nucleotide-binding protein
JOFJPCFG_00755 1.6e-163 rapZ S Displays ATPase and GTPase activities
JOFJPCFG_00756 1.1e-181 ybhK S Required for morphogenesis under gluconeogenic growth conditions
JOFJPCFG_00757 8.7e-162 whiA K May be required for sporulation
JOFJPCFG_00758 2e-77 pepD E Dipeptidase
JOFJPCFG_00759 5.4e-32 cspD K Cold shock protein domain
JOFJPCFG_00760 3.6e-42 K Cold-Shock Protein
JOFJPCFG_00761 9.1e-43 L Transposase
JOFJPCFG_00762 0.0 copB 3.6.3.4 P P-type ATPase
JOFJPCFG_00763 7e-43 L Transposase
JOFJPCFG_00764 3.2e-41 L Transposase
JOFJPCFG_00765 2e-119 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
JOFJPCFG_00766 6.2e-168 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
JOFJPCFG_00767 7.7e-219 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
JOFJPCFG_00768 3.4e-95 cysE 2.3.1.30 E Bacterial transferase hexapeptide (six repeats)
JOFJPCFG_00769 1.9e-209 L Transposase
JOFJPCFG_00770 2.2e-83 hsdS_1 3.1.21.3 V Type I restriction modification DNA specificity domain
JOFJPCFG_00771 6.8e-84 hsdM 2.1.1.72 V type I restriction-modification system
JOFJPCFG_00772 3.6e-152 glcU U Glucose uptake
JOFJPCFG_00773 3.4e-79 hsdM 2.1.1.72 V HsdM N-terminal domain
JOFJPCFG_00774 1.5e-86 XK27_10720 D peptidase activity
JOFJPCFG_00775 4.7e-293 adcA P Belongs to the bacterial solute-binding protein 9 family
JOFJPCFG_00776 2.9e-08
JOFJPCFG_00778 1.1e-170 yeiH S Membrane
JOFJPCFG_00779 8.1e-110 mur1 NU muramidase
JOFJPCFG_00780 1.5e-29 L transposase activity
JOFJPCFG_00781 2e-67 L transposition
JOFJPCFG_00782 2.6e-166 cpsY K Transcriptional regulator
JOFJPCFG_00783 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
JOFJPCFG_00784 2.5e-58 phnA P Alkylphosphonate utilization operon protein PhnA
JOFJPCFG_00785 2e-104 artQ P ABC transporter (Permease
JOFJPCFG_00786 2e-112 glnQ 3.6.3.21 E abc transporter atp-binding protein
JOFJPCFG_00787 2.5e-158 aatB ET ABC transporter substrate-binding protein
JOFJPCFG_00788 1e-48 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JOFJPCFG_00789 2.7e-65 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JOFJPCFG_00791 1.7e-50 adhP 1.1.1.1 C alcohol dehydrogenase
JOFJPCFG_00792 3e-74 adhP 1.1.1.1 C alcohol dehydrogenase
JOFJPCFG_00793 8.7e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
JOFJPCFG_00794 1.7e-125 gntR1 K transcriptional
JOFJPCFG_00795 1.1e-53 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
JOFJPCFG_00796 8.5e-274 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JOFJPCFG_00797 1.2e-88 niaR S small molecule binding protein (contains 3H domain)
JOFJPCFG_00798 3.7e-128 K DNA-binding helix-turn-helix protein
JOFJPCFG_00799 1.1e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JOFJPCFG_00800 1.4e-136 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JOFJPCFG_00801 3.7e-168 GK ROK family
JOFJPCFG_00802 4.1e-158 dprA LU DNA protecting protein DprA
JOFJPCFG_00803 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JOFJPCFG_00804 4.3e-152 S TraX protein
JOFJPCFG_00805 5.4e-121 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
JOFJPCFG_00806 5.6e-253 T PhoQ Sensor
JOFJPCFG_00807 6.6e-259 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
JOFJPCFG_00808 1.5e-38 XK27_05470 E Methionine synthase
JOFJPCFG_00809 1.7e-75 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
JOFJPCFG_00810 2.1e-45 pspE P Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JOFJPCFG_00811 3.1e-91 ET Bacterial periplasmic substrate-binding proteins
JOFJPCFG_00812 6.6e-54 IQ Acetoin reductase
JOFJPCFG_00813 5e-44 IQ Acetoin reductase
JOFJPCFG_00815 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
JOFJPCFG_00817 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
JOFJPCFG_00818 2.2e-34 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
JOFJPCFG_00819 2.7e-146 L Transposase
JOFJPCFG_00820 2.4e-117 V ABC transporter (Permease
JOFJPCFG_00821 9.2e-114 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
JOFJPCFG_00822 9.9e-97 K Transcriptional regulator, TetR family
JOFJPCFG_00823 6.4e-157 czcD P cation diffusion facilitator family transporter
JOFJPCFG_00824 7.7e-140 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
JOFJPCFG_00825 2.4e-41 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
JOFJPCFG_00826 2.9e-193 adhB 1.1.1.1, 1.1.1.14 E Dehydrogenase
JOFJPCFG_00827 6e-08 S Hydrolases of the alpha beta superfamily
JOFJPCFG_00828 3e-16 S Alpha/beta hydrolase of unknown function (DUF915)
JOFJPCFG_00829 9.7e-29 S Alpha/beta hydrolase of unknown function (DUF915)
JOFJPCFG_00832 2.6e-143 2.4.2.3 F Phosphorylase superfamily
JOFJPCFG_00833 3.6e-14 yclQ P ABC-type enterochelin transport system, periplasmic component
JOFJPCFG_00834 3.6e-18 yclQ P ABC-type enterochelin transport system, periplasmic component
JOFJPCFG_00836 2.1e-310 FbpA K RNA-binding protein homologous to eukaryotic snRNP
JOFJPCFG_00838 1.6e-74 S TraX protein
JOFJPCFG_00839 1.1e-95 thiJ 2.7.11.1, 3.5.1.124 S DJ-1 family
JOFJPCFG_00840 1.3e-148 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
JOFJPCFG_00841 7.2e-175 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
JOFJPCFG_00842 2.6e-183 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JOFJPCFG_00843 4.6e-52 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JOFJPCFG_00844 1.8e-116 csm3 L RAMP superfamily
JOFJPCFG_00845 2.3e-167 csm4 L CRISPR-associated RAMP protein, Csm4 family
JOFJPCFG_00846 7.5e-205 csm5 L CRISPR-associated RAMP protein, Csm5 family
JOFJPCFG_00847 5.5e-29 csm6 S Psort location Cytoplasmic, score
JOFJPCFG_00848 6.4e-28 csm6 S Psort location Cytoplasmic, score
JOFJPCFG_00849 7e-127 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
JOFJPCFG_00850 5.7e-112 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JOFJPCFG_00852 5.8e-46 nylA 3.5.1.4 J Belongs to the amidase family
JOFJPCFG_00853 1.8e-15 yfiF3 K sequence-specific DNA binding
JOFJPCFG_00854 1.7e-246 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
JOFJPCFG_00855 1.3e-238 agcS E (Alanine) symporter
JOFJPCFG_00856 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
JOFJPCFG_00857 1.7e-240 metY 2.5.1.49 E o-acetylhomoserine
JOFJPCFG_00858 8.3e-57 Q phosphatase activity
JOFJPCFG_00859 2.7e-61 S haloacid dehalogenase-like hydrolase
JOFJPCFG_00860 1.3e-87 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
JOFJPCFG_00861 1.2e-109 hsdS2 2.1.1.72 V Type I restriction modification DNA specificity domain
JOFJPCFG_00862 9e-30 M1-755 P Hemerythrin HHE cation binding domain protein
JOFJPCFG_00863 2.2e-134 XK27_04775 S hemerythrin HHE cation binding domain
JOFJPCFG_00864 1.1e-59 XK27_04775 S hemerythrin HHE cation binding domain
JOFJPCFG_00865 7.1e-150 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JOFJPCFG_00866 2e-174 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
JOFJPCFG_00867 1.4e-71 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
JOFJPCFG_00868 1.9e-43 yktA S Belongs to the UPF0223 family
JOFJPCFG_00869 3.2e-141 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
JOFJPCFG_00870 1.5e-255 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
JOFJPCFG_00871 3.3e-158 pstS P phosphate
JOFJPCFG_00872 9.4e-156 pstC P probably responsible for the translocation of the substrate across the membrane
JOFJPCFG_00873 1.2e-155 pstA P phosphate transport system permease
JOFJPCFG_00874 1e-150 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
JOFJPCFG_00875 2.3e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
JOFJPCFG_00876 1.9e-113 phoU P Plays a role in the regulation of phosphate uptake
JOFJPCFG_00877 0.0 pepN 3.4.11.2 E aminopeptidase
JOFJPCFG_00878 2e-194 xerS D Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division
JOFJPCFG_00879 1.3e-187 lplA 6.3.1.20 H Lipoate-protein ligase
JOFJPCFG_00881 4.8e-221 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
JOFJPCFG_00882 1.1e-179 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
JOFJPCFG_00883 1.9e-302 malQ 2.4.1.25 GH77 G 4-alpha-glucanotransferase
JOFJPCFG_00884 1.1e-90 malR K Transcriptional regulator
JOFJPCFG_00885 4.6e-25 tatA U protein secretion
JOFJPCFG_00886 4.4e-121 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JOFJPCFG_00887 3.9e-301 ywbL P COG0672 High-affinity Fe2 Pb2 permease
JOFJPCFG_00888 1.7e-226 ycdB P peroxidase
JOFJPCFG_00889 3.5e-144 ycdO P periplasmic lipoprotein involved in iron transport
JOFJPCFG_00890 1.3e-177 fatB P ABC-type enterochelin transport system, periplasmic component
JOFJPCFG_00891 2e-135 yclP 3.6.3.34 P abc transporter atp-binding protein
JOFJPCFG_00892 4.8e-166 fatC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JOFJPCFG_00893 3e-165 yclN P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JOFJPCFG_00894 3.1e-123 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
JOFJPCFG_00895 5.2e-56 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
JOFJPCFG_00896 6.2e-50 L Transposase and inactivated derivatives IS30 family
JOFJPCFG_00897 8.1e-15 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
JOFJPCFG_00898 0.0 lpdA 1.8.1.4 C Dehydrogenase
JOFJPCFG_00899 2.5e-197 acoC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
JOFJPCFG_00900 3.7e-182 acoB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
JOFJPCFG_00901 4.6e-185 acoA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
JOFJPCFG_00902 2.1e-32 S the current gene model (or a revised gene model) may contain a frame shift
JOFJPCFG_00903 2.4e-234 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
JOFJPCFG_00904 2.9e-127 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
JOFJPCFG_00905 2.4e-215 yeaB K Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JOFJPCFG_00906 3.3e-89 3.4.16.4 M Belongs to the peptidase S11 family
JOFJPCFG_00907 3.2e-158 rssA S Phospholipase, patatin family
JOFJPCFG_00908 3.1e-18 estA E GDSL-like protein
JOFJPCFG_00909 4.8e-52 estA E GDSL-like protein
JOFJPCFG_00910 5.9e-14 estA E Lysophospholipase L1 and related esterases
JOFJPCFG_00911 2.1e-288 S unusual protein kinase
JOFJPCFG_00912 4.9e-39 S granule-associated protein
JOFJPCFG_00913 7.1e-36 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
JOFJPCFG_00914 3e-103 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
JOFJPCFG_00915 5.8e-28 bglH 3.2.1.86 GT1 G beta-glucosidase activity
JOFJPCFG_00916 6.5e-199 S hmm pf01594
JOFJPCFG_00917 2e-42 G alpha-ribazole phosphatase activity
JOFJPCFG_00918 3.9e-23 supH 3.1.3.102, 3.1.3.104 Q phosphatase activity
JOFJPCFG_00919 6.8e-21 supH 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
JOFJPCFG_00920 9.2e-15 supH 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
JOFJPCFG_00921 3.1e-12 L Transposase
JOFJPCFG_00922 7e-40 L Transposase
JOFJPCFG_00923 1.4e-69 tnp L DDE domain
JOFJPCFG_00924 2.7e-92 V VanZ like family
JOFJPCFG_00925 4.7e-113 cpsD D COG0489 ATPases involved in chromosome partitioning
JOFJPCFG_00926 7.7e-102 cps4C M biosynthesis protein
JOFJPCFG_00927 7.3e-135 cpsB 3.1.3.48 GM Capsular polysaccharide biosynthesis protein
JOFJPCFG_00928 4.4e-248 cps4A K Cell envelope-like function transcriptional attenuator common domain protein
JOFJPCFG_00929 3.2e-127 deoD 2.4.2.1, 2.4.2.28 F purine nucleoside phosphorylase
JOFJPCFG_00930 8.6e-47 yfeJ 6.3.5.2 F glutamine amidotransferase
JOFJPCFG_00931 1.1e-46 yfeJ 6.3.5.2 F glutamine amidotransferase
JOFJPCFG_00932 1.2e-46 clcA_2 P chloride channel
JOFJPCFG_00933 4.9e-148 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
JOFJPCFG_00934 1.1e-87 S Protein of unknown function (DUF1697)
JOFJPCFG_00935 4.2e-236 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
JOFJPCFG_00936 1.7e-122 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
JOFJPCFG_00937 9.1e-13 V Glucan-binding protein C
JOFJPCFG_00938 4.4e-106 ung2 3.2.2.27 L Uracil-DNA glycosylase
JOFJPCFG_00939 3.4e-274 pepV 3.5.1.18 E Dipeptidase
JOFJPCFG_00940 6.4e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
JOFJPCFG_00941 9.4e-83 XK27_03610 K Gnat family
JOFJPCFG_00942 8.5e-84 L Transposase
JOFJPCFG_00943 1.5e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JOFJPCFG_00944 2.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
JOFJPCFG_00945 9.8e-89 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
JOFJPCFG_00946 1.1e-121 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
JOFJPCFG_00947 6.3e-18 M LysM domain
JOFJPCFG_00948 4.9e-90 ebsA S Family of unknown function (DUF5322)
JOFJPCFG_00949 2e-233 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
JOFJPCFG_00950 1.2e-97 lepB 3.4.21.89 U Belongs to the peptidase S26 family
JOFJPCFG_00951 4.9e-224 G COG0457 FOG TPR repeat
JOFJPCFG_00952 6.4e-173 yubA S permease
JOFJPCFG_00953 1e-92 mutX 3.6.1.55 F NTP pyrophosphohydrolases including oxidative damage repair enzymes
JOFJPCFG_00954 1.4e-162 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
JOFJPCFG_00955 2.5e-124 ftsE D cell division ATP-binding protein FtsE
JOFJPCFG_00956 1.3e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
JOFJPCFG_00957 1.2e-202 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JOFJPCFG_00958 9e-155 yjjH S Calcineurin-like phosphoesterase
JOFJPCFG_00959 6.7e-136 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
JOFJPCFG_00960 0.0 pacL 3.6.3.8 P cation transport ATPase
JOFJPCFG_00961 2.6e-67 ywiB S Domain of unknown function (DUF1934)
JOFJPCFG_00962 8.3e-51 XK27_00115 2.3.1.128 K acetyltransferase
JOFJPCFG_00963 3.5e-146 yidA S hydrolases of the HAD superfamily
JOFJPCFG_00964 9e-231 murM 2.3.2.10, 2.3.2.16 V protein involved in methicillin resistance
JOFJPCFG_00965 3.9e-153 vicX 3.1.26.11 S Metal-dependent hydrolases of the beta-lactamase superfamily I
JOFJPCFG_00966 2.1e-233 vicK 2.7.13.3 T Histidine kinase
JOFJPCFG_00967 1.7e-128 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
JOFJPCFG_00968 4.6e-140 glnQ 3.6.3.21 E abc transporter atp-binding protein
JOFJPCFG_00969 9.2e-150 peb1A ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
JOFJPCFG_00970 7.7e-118 gltJ P ABC transporter (Permease
JOFJPCFG_00971 3.8e-111 tcyB_2 P ABC transporter (permease)
JOFJPCFG_00972 2.4e-124 endA F DNA RNA non-specific endonuclease
JOFJPCFG_00973 6.1e-25 epuA S DNA-directed RNA polymerase subunit beta
JOFJPCFG_00974 7.2e-231 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JOFJPCFG_00976 6.7e-195 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
JOFJPCFG_00977 1.1e-24 G Domain of unknown function (DUF4832)
JOFJPCFG_00978 5.1e-202 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
JOFJPCFG_00979 6.9e-170 birA 6.3.4.15 HK Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
JOFJPCFG_00980 3.2e-295 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JOFJPCFG_00981 4.7e-88 ytsP 1.8.4.14 T GAF domain-containing protein
JOFJPCFG_00982 1.4e-164 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JOFJPCFG_00983 2.7e-19 WQ51_02665 S Protein of unknown function (DUF3042)
JOFJPCFG_00986 8.5e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
JOFJPCFG_00987 6.3e-216 XK27_05110 P chloride
JOFJPCFG_00988 6.3e-31 pheA 1.3.1.12, 2.3.1.79, 4.2.1.51, 5.4.99.5 E Chorismate mutase
JOFJPCFG_00989 2.2e-282 clcA P Chloride transporter, ClC family
JOFJPCFG_00990 5.1e-75 fld C Flavodoxin
JOFJPCFG_00991 2.5e-14 XK27_08880
JOFJPCFG_00992 1.4e-125 XK27_08875 O Zinc-dependent metalloprotease
JOFJPCFG_00993 3.5e-151 estA CE1 S Putative esterase
JOFJPCFG_00994 1.9e-308 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JOFJPCFG_00995 9.9e-135 XK27_08845 S abc transporter atp-binding protein
JOFJPCFG_00996 7.6e-147 XK27_08840 S Belongs to the binding-protein-dependent transport system permease family
JOFJPCFG_00997 2.1e-177 XK27_08835 S ABC transporter substrate binding protein
JOFJPCFG_00998 3.2e-17 S Domain of unknown function (DUF4649)
JOFJPCFG_01000 3.9e-22 Q the current gene model (or a revised gene model) may contain a frame shift
JOFJPCFG_01001 2.2e-09 Q the current gene model (or a revised gene model) may contain a frame shift
JOFJPCFG_01002 1.6e-26 Q the current gene model (or a revised gene model) may contain a frame shift
JOFJPCFG_01004 3.2e-09 Q the current gene model (or a revised gene model) may contain a frame shift
JOFJPCFG_01005 1.9e-275 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
JOFJPCFG_01006 3.6e-188 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
JOFJPCFG_01007 0.0 dnaE 2.7.7.7 L DNA polymerase
JOFJPCFG_01008 1.4e-152 sua5 2.7.7.87 J Belongs to the SUA5 family
JOFJPCFG_01009 1.6e-111 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
JOFJPCFG_01010 1.5e-274 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
JOFJPCFG_01011 8.1e-42 ysdA L Membrane
JOFJPCFG_01012 6.2e-188 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
JOFJPCFG_01013 1.4e-289 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JOFJPCFG_01014 1.3e-130 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JOFJPCFG_01015 2.5e-180 pyrD 1.3.1.14, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate
JOFJPCFG_01017 2.8e-39 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
JOFJPCFG_01018 2e-95 ypmS S Protein conserved in bacteria
JOFJPCFG_01019 4.2e-145 ypmR E lipolytic protein G-D-S-L family
JOFJPCFG_01020 4.7e-146 DegV S DegV family
JOFJPCFG_01021 5.8e-305 recN L May be involved in recombinational repair of damaged DNA
JOFJPCFG_01022 1.7e-73 argR K arginine binding
JOFJPCFG_01023 2.8e-157 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
JOFJPCFG_01024 1.5e-158 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
JOFJPCFG_01025 3.5e-29 xseB 3.1.11.6 L exodeoxyribonuclease VII activity
JOFJPCFG_01026 2.6e-247 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
JOFJPCFG_01029 7.6e-120 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JOFJPCFG_01030 2.9e-125 dnaD
JOFJPCFG_01031 7.9e-182 metA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
JOFJPCFG_01032 2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JOFJPCFG_01033 0.0 recJ L Single-strand DNA-specific exonuclease, C terminal domain
JOFJPCFG_01034 2e-174 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
JOFJPCFG_01035 3e-116 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
JOFJPCFG_01036 7.1e-223 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JOFJPCFG_01037 4.8e-239 rodA D Belongs to the SEDS family
JOFJPCFG_01038 1.9e-51 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
JOFJPCFG_01039 7.9e-10 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
JOFJPCFG_01040 6.5e-139 hisK 3.1.3.15 E Histidinol phosphatase and related hydrolases of the PHP family
JOFJPCFG_01041 3.4e-120 ylfI S tigr01906
JOFJPCFG_01042 3.8e-142 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
JOFJPCFG_01043 1.5e-143 fat 3.1.2.21 I Acyl-ACP thioesterase
JOFJPCFG_01044 1.2e-216 hemN H Involved in the biosynthesis of porphyrin-containing compound
JOFJPCFG_01047 1.9e-205 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
JOFJPCFG_01048 2.4e-112 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
JOFJPCFG_01049 5.4e-161 rfbA 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
JOFJPCFG_01050 1.8e-206 yurR 1.4.5.1 E oxidoreductase
JOFJPCFG_01051 3.9e-100 zupT P Mediates zinc uptake. May also transport other divalent cations
JOFJPCFG_01052 1.6e-148 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JOFJPCFG_01053 2.7e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
JOFJPCFG_01054 1.3e-70 gtrA S GtrA-like protein
JOFJPCFG_01055 2.5e-250 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JOFJPCFG_01056 6e-169 ybbR S Protein conserved in bacteria
JOFJPCFG_01057 5.6e-124 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JOFJPCFG_01058 3.1e-253 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain protein
JOFJPCFG_01059 1.5e-149 cobQ S glutamine amidotransferase
JOFJPCFG_01060 0.0 mprF 2.3.2.3 J Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JOFJPCFG_01061 3.5e-129 pip 1.11.1.10 S Alpha beta hydrolase
JOFJPCFG_01063 0.0 uup S abc transporter atp-binding protein
JOFJPCFG_01064 2.1e-114 udk 2.7.1.48 F Cytidine monophosphokinase
JOFJPCFG_01065 1.6e-178 yfmL 3.6.4.13 L DEAD DEAH box helicase
JOFJPCFG_01066 9.6e-29 6.3.2.2, 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
JOFJPCFG_01067 8.6e-265 gapN 1.2.1.9 C Belongs to the aldehyde dehydrogenase family
JOFJPCFG_01068 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JOFJPCFG_01069 7.9e-39 ptsH G phosphocarrier protein Hpr
JOFJPCFG_01070 2e-222 icd 1.1.1.42 C Isocitrate dehydrogenase
JOFJPCFG_01071 3.6e-210 citZ 2.3.3.1 C Belongs to the citrate synthase family
JOFJPCFG_01072 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
JOFJPCFG_01073 2.5e-33 nrdH O Glutaredoxin
JOFJPCFG_01074 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JOFJPCFG_01075 1.7e-184 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JOFJPCFG_01077 6.1e-70 L Transposase (IS116 IS110 IS902 family)
JOFJPCFG_01078 5.1e-27 L Transposase (IS116 IS110 IS902 family)
JOFJPCFG_01079 4e-165 ypuA S secreted protein
JOFJPCFG_01080 9.4e-55 yaeR E COG0346 LactoylglutaTHIone lyase and related lyases
JOFJPCFG_01081 2.5e-130 srtA 3.4.22.70 M Sortase (surface protein transpeptidase)
JOFJPCFG_01082 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JOFJPCFG_01083 1.4e-181 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
JOFJPCFG_01084 9.2e-256 noxE P NADH oxidase
JOFJPCFG_01085 1.4e-292 yfmM S abc transporter atp-binding protein
JOFJPCFG_01086 4.8e-43 XK27_01265 S ECF-type riboflavin transporter, S component
JOFJPCFG_01088 6e-86 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
JOFJPCFG_01089 1.7e-43 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
JOFJPCFG_01090 7.4e-86 S ECF-type riboflavin transporter, S component
JOFJPCFG_01092 3.2e-239 XK27_08130 K Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
JOFJPCFG_01093 7e-56 nrdD_1 1.1.98.6, 1.17.4.1 F Ribonucleoside-triphosphate reductase
JOFJPCFG_01096 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
JOFJPCFG_01097 1.5e-89 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
JOFJPCFG_01098 1.2e-196 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JOFJPCFG_01099 0.0 smc D Required for chromosome condensation and partitioning
JOFJPCFG_01100 1.9e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
JOFJPCFG_01101 8.6e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JOFJPCFG_01102 1.1e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JOFJPCFG_01103 1e-86 alkD L Dna alkylation repair
JOFJPCFG_01104 2.4e-92 pat 2.3.1.183 M acetyltransferase
JOFJPCFG_01105 5.1e-13
JOFJPCFG_01106 8.2e-64 L Transposase
JOFJPCFG_01107 5.8e-277 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JOFJPCFG_01108 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
JOFJPCFG_01109 4.6e-38 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 E hydrolase
JOFJPCFG_01110 5.6e-21 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 E hydrolase
JOFJPCFG_01111 7.6e-52 bioY S biotin transmembrane transporter activity
JOFJPCFG_01112 3.6e-90 proW P Binding-protein-dependent transport system inner membrane component
JOFJPCFG_01113 1.9e-138 proV E abc transporter atp-binding protein
JOFJPCFG_01114 1.7e-168 proX M ABC transporter, substrate-binding protein, QAT family
JOFJPCFG_01115 2.1e-109 proWZ P ABC transporter (Permease
JOFJPCFG_01116 6.9e-281 hutH 4.3.1.3 E Histidine ammonia-lyase
JOFJPCFG_01117 1.3e-204 S Protein of unknown function (DUF917)
JOFJPCFG_01118 4.5e-311 hutU 4.2.1.49 E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
JOFJPCFG_01119 3.6e-120 sdaAB 4.3.1.17 E L-serine dehydratase
JOFJPCFG_01120 5.8e-147 sdaAA 4.3.1.17 E L-serine dehydratase
JOFJPCFG_01121 5.2e-21
JOFJPCFG_01122 1.9e-59 S ABC-2 family transporter protein
JOFJPCFG_01123 2.4e-30 S ABC-2 family transporter protein
JOFJPCFG_01124 1.3e-45 S abc transporter atp-binding protein
JOFJPCFG_01125 4e-34 S AAA domain, putative AbiEii toxin, Type IV TA system
JOFJPCFG_01126 5.7e-101 desR K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
JOFJPCFG_01127 3.8e-143 desK 2.7.13.3 T Histidine kinase
JOFJPCFG_01128 6.4e-131 yvfS V ABC-2 type transporter
JOFJPCFG_01129 1e-154 XK27_09825 V abc transporter atp-binding protein
JOFJPCFG_01132 1.1e-159 yocS S Transporter
JOFJPCFG_01133 2.2e-81 cdd 2.4.2.4, 3.5.4.5 F cytidine deaminase activity
JOFJPCFG_01134 1.7e-56 V ABC transporter (permease)
JOFJPCFG_01135 2.7e-132 macB2 V ABC transporter, ATP-binding protein
JOFJPCFG_01136 8.7e-160 T Histidine kinase
JOFJPCFG_01137 3.5e-123 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
JOFJPCFG_01138 1.8e-35 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
JOFJPCFG_01139 2.3e-48 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
JOFJPCFG_01140 7.5e-34 pbuX F xanthine permease
JOFJPCFG_01141 8.7e-243 norM V Multidrug efflux pump
JOFJPCFG_01142 9e-186 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JOFJPCFG_01143 2.6e-85 yxeM ET Belongs to the bacterial solute-binding protein 3 family
JOFJPCFG_01144 2.9e-198 pcaB 4.3.2.2 F Adenylosuccinate lyase
JOFJPCFG_01145 3.6e-92 yxeO 3.6.3.21 E abc transporter atp-binding protein
JOFJPCFG_01146 4.1e-63 yxeN U ABC transporter, permease protein
JOFJPCFG_01147 5.4e-58 yxeL K Acetyltransferase (GNAT) domain
JOFJPCFG_01148 3e-115 yxeQ S MmgE/PrpD family
JOFJPCFG_01149 1.5e-130 ykrV3 2.6.1.83 E mutations do not affect methionine salvage in vivo however
JOFJPCFG_01150 3e-42 gldA 1.1.1.1, 1.1.1.6 C glycerol dehydrogenase
JOFJPCFG_01151 2.4e-48 gldA 1.1.1.1, 1.1.1.6 C glycerol dehydrogenase
JOFJPCFG_01152 3.2e-07 gldA 1.1.1.1, 1.1.1.6 C glycerol dehydrogenase
JOFJPCFG_01153 8.6e-183 hipO E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
JOFJPCFG_01154 1.1e-232 brnQ E Component of the transport system for branched-chain amino acids
JOFJPCFG_01155 9.6e-26 csbD K CsbD-like
JOFJPCFG_01156 6.2e-228 yfnA E amino acid
JOFJPCFG_01157 1.1e-109 XK27_02070 S nitroreductase
JOFJPCFG_01158 3.5e-16 1.13.11.2 S glyoxalase
JOFJPCFG_01159 2.8e-97 1.13.11.2 S glyoxalase
JOFJPCFG_01160 1.2e-76 ywnA K Transcriptional regulator
JOFJPCFG_01161 8e-157 E Alpha/beta hydrolase of unknown function (DUF915)
JOFJPCFG_01162 8.7e-232 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JOFJPCFG_01163 1.8e-110 drgA C Nitroreductase
JOFJPCFG_01164 1.6e-87 yoaK S Protein of unknown function (DUF1275)
JOFJPCFG_01166 6.8e-161 yvgN C reductase
JOFJPCFG_01167 7.2e-86 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
JOFJPCFG_01168 6.9e-09
JOFJPCFG_01169 5.3e-92 S Abortive infection C-terminus
JOFJPCFG_01170 0.0 L DEAD-like helicases superfamily
JOFJPCFG_01171 2e-118 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
JOFJPCFG_01172 2.7e-285 XK27_07020 S Belongs to the UPF0371 family
JOFJPCFG_01174 3.7e-36 BP1961 P nitric oxide dioxygenase activity
JOFJPCFG_01175 5.4e-54 K response regulator
JOFJPCFG_01176 7.4e-31 S Signal peptide protein, YSIRK family
JOFJPCFG_01177 9.8e-60
JOFJPCFG_01178 5.1e-19
JOFJPCFG_01180 7.1e-27 IQ PFAM AMP-dependent synthetase and ligase
JOFJPCFG_01181 2.7e-49 MA20_06410 E LysE type translocator
JOFJPCFG_01182 3.7e-48 MA20_06410 E LysE type translocator
JOFJPCFG_01183 2.3e-08
JOFJPCFG_01184 0.0 M family 8
JOFJPCFG_01185 0.0 sbcC L ATPase involved in DNA repair
JOFJPCFG_01186 3.2e-228 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
JOFJPCFG_01187 0.0 lacL 3.2.1.23 G -beta-galactosidase
JOFJPCFG_01188 0.0 lacS G transporter
JOFJPCFG_01189 3.2e-200 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
JOFJPCFG_01190 4.3e-194 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
JOFJPCFG_01191 5.2e-292 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
JOFJPCFG_01192 2.4e-220 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JOFJPCFG_01193 3.5e-180 galR K Transcriptional regulator
JOFJPCFG_01194 2.1e-08 L Integrase core domain protein
JOFJPCFG_01195 2.3e-24 L transposition
JOFJPCFG_01196 1.2e-71 M translation initiation factor activity
JOFJPCFG_01197 1.4e-93 M translation initiation factor activity
JOFJPCFG_01198 4e-33 rtxA M M26 IgA1-specific Metallo-endopeptidase C-terminal region
JOFJPCFG_01199 2.1e-18 rtxA M M26 IgA1-specific Metallo-endopeptidase C-terminal region
JOFJPCFG_01200 6e-35 V abc transporter atp-binding protein
JOFJPCFG_01201 0.0 gshF 6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
JOFJPCFG_01202 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
JOFJPCFG_01203 1.3e-187 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
JOFJPCFG_01204 2.1e-134 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
JOFJPCFG_01205 1.9e-92 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JOFJPCFG_01208 2.2e-114 vraR K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
JOFJPCFG_01209 1.7e-174 vraS 2.7.13.3 T Histidine kinase
JOFJPCFG_01210 4.5e-118 yvqF KT membrane
JOFJPCFG_01211 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
JOFJPCFG_01212 2e-132 stp 3.1.3.16 T phosphatase
JOFJPCFG_01213 8.9e-248 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JOFJPCFG_01214 3.5e-174 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JOFJPCFG_01215 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JOFJPCFG_01216 2.7e-46 rpoZ 2.7.7.6 K DNA-directed 5'-3' RNA polymerase activity
JOFJPCFG_01217 2e-112 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
JOFJPCFG_01218 5.9e-218 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
JOFJPCFG_01219 9.9e-149 XK27_02985 S overlaps another CDS with the same product name
JOFJPCFG_01220 1.4e-144 supH S overlaps another CDS with the same product name
JOFJPCFG_01221 2.5e-62 yvoA_1 K Transcriptional
JOFJPCFG_01222 5.4e-119 skfE V abc transporter atp-binding protein
JOFJPCFG_01223 3.3e-133 V ATPase activity
JOFJPCFG_01224 4.3e-172 oppF P Belongs to the ABC transporter superfamily
JOFJPCFG_01225 6.4e-204 oppD P Belongs to the ABC transporter superfamily
JOFJPCFG_01226 4.4e-98 amiD P ABC transporter (Permease
JOFJPCFG_01227 1.1e-273 amiC P ABC transporter (Permease
JOFJPCFG_01228 3.7e-46 amiA E ABC transporter, substrate-binding protein, family 5
JOFJPCFG_01229 1.5e-236 L Transposase
JOFJPCFG_01230 2.1e-46 L Transposase
JOFJPCFG_01231 2.2e-179 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
JOFJPCFG_01232 2.8e-173 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
JOFJPCFG_01233 8.3e-151 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JOFJPCFG_01234 1.5e-121 yjbM 2.7.6.5 S Gtp pyrophosphokinase
JOFJPCFG_01235 1.5e-103 yjbK S Adenylate cyclase
JOFJPCFG_01236 2.1e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JOFJPCFG_01237 9.2e-206 iscS 2.8.1.7 E Cysteine desulfurase
JOFJPCFG_01238 3.1e-59 XK27_04120 S Putative amino acid metabolism
JOFJPCFG_01239 1.4e-116 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
JOFJPCFG_01240 6.1e-131 puuD T peptidase C26
JOFJPCFG_01241 6.9e-119 radC E Belongs to the UPF0758 family
JOFJPCFG_01242 2.6e-160 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
JOFJPCFG_01243 1.5e-169 yfdH GT2 M COG0463, glycosyltransferases involved in cell wall biogenesis
JOFJPCFG_01244 3.4e-55 yitW K metal-sulfur cluster biosynthetic enzyme
JOFJPCFG_01245 1.5e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
JOFJPCFG_01246 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
JOFJPCFG_01248 3.2e-20 rpsU J Belongs to the bacterial ribosomal protein bS21 family
JOFJPCFG_01249 3.7e-132 gltS ET Belongs to the bacterial solute-binding protein 3 family
JOFJPCFG_01250 7.1e-147 arcT 2.6.1.1 E Aminotransferase
JOFJPCFG_01251 2.2e-48 arcT 2.6.1.1 E Aminotransferase
JOFJPCFG_01252 2.5e-136 ET ABC transporter
JOFJPCFG_01253 2.4e-142 ET Belongs to the bacterial solute-binding protein 3 family
JOFJPCFG_01254 1.2e-82 mutT 3.6.1.55 F Nudix family
JOFJPCFG_01255 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
JOFJPCFG_01257 3.1e-124 S CAAX amino terminal protease family protein
JOFJPCFG_01258 0.0 glnP P ABC-type amino acid transport signal transduction systems periplasmic component domain
JOFJPCFG_01259 6e-137 glnQ 3.6.3.21 E abc transporter atp-binding protein
JOFJPCFG_01260 1.1e-16 XK27_00735
JOFJPCFG_01261 1.4e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
JOFJPCFG_01263 6.2e-134 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
JOFJPCFG_01265 5.5e-65 paaI Q protein possibly involved in aromatic compounds catabolism
JOFJPCFG_01266 2e-115 serB 3.1.3.3 E phosphoserine phosphatase
JOFJPCFG_01267 5.1e-304 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
JOFJPCFG_01268 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JOFJPCFG_01269 3.7e-108 3.1.3.18 S IA, variant 1
JOFJPCFG_01270 2.9e-117 lrgB M effector of murein hydrolase
JOFJPCFG_01271 2.2e-58 lrgA S Effector of murein hydrolase LrgA
JOFJPCFG_01273 6.4e-60 arsC 1.20.4.1 P Belongs to the ArsC family
JOFJPCFG_01274 1.5e-219 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JOFJPCFG_01275 2.5e-103 wecD M Acetyltransferase (GNAT) domain
JOFJPCFG_01276 1.9e-208 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
JOFJPCFG_01277 1.9e-29 GK ROK family
JOFJPCFG_01278 2.6e-72 GK ROK family
JOFJPCFG_01279 8.1e-72 gloA 4.4.1.5 E Lactoylglutathione lyase
JOFJPCFG_01280 2.7e-113 XK27_08050 O HflC and HflK could regulate a protease
JOFJPCFG_01282 5.2e-206 potD P spermidine putrescine ABC transporter
JOFJPCFG_01283 1.1e-131 potC P ABC-type spermidine putrescine transport system, permease component II
JOFJPCFG_01284 3.7e-140 potB P ABC-type spermidine putrescine transport system, permease component I
JOFJPCFG_01285 1.2e-213 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
JOFJPCFG_01286 1.1e-169 murB 1.3.1.98 M cell wall formation
JOFJPCFG_01287 8.5e-87 folK 2.7.6.3, 4.1.2.25 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JOFJPCFG_01288 1.2e-61 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JOFJPCFG_01289 1e-297 amy 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
JOFJPCFG_01290 7e-147 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JOFJPCFG_01291 1e-99 folE 3.5.4.16 F gtp cyclohydrolase
JOFJPCFG_01292 3e-102 ydaO E amino acid
JOFJPCFG_01293 3.6e-88 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
JOFJPCFG_01294 4.1e-37 ylqC L Belongs to the UPF0109 family
JOFJPCFG_01295 2.4e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
JOFJPCFG_01296 6.9e-172 tehB 2.1.1.265 PQ tellurite resistance protein tehb
JOFJPCFG_01298 8.5e-156 xth 3.1.11.2 L exodeoxyribonuclease III
JOFJPCFG_01299 2.1e-74 S QueT transporter
JOFJPCFG_01300 1.2e-48 ribD 1.1.1.193, 3.5.4.26 L Transposase DDE domain
JOFJPCFG_01301 4.8e-185 yegS 2.7.1.107 I Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
JOFJPCFG_01302 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JOFJPCFG_01303 2.2e-85 ccl S cog cog4708
JOFJPCFG_01304 1.4e-159 rbn E Belongs to the UPF0761 family
JOFJPCFG_01305 7.2e-166 map 3.4.11.18 E Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed
JOFJPCFG_01306 1.5e-228 ytoI K transcriptional regulator containing CBS domains
JOFJPCFG_01307 9.1e-98 XK27_07830 2.3.1.128 J Acetyltransferase GNAT Family
JOFJPCFG_01308 1.3e-232 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JOFJPCFG_01309 0.0 comEC S Competence protein ComEC
JOFJPCFG_01310 3.2e-95 comEA L COG1555 DNA uptake protein and related DNA-binding proteins
JOFJPCFG_01311 1.3e-142 plsC 2.3.1.51 I Acyltransferase
JOFJPCFG_01312 2.5e-76 nodB3 G polysaccharide deacetylase
JOFJPCFG_01313 1.7e-47 nodB3 G polysaccharide deacetylase
JOFJPCFG_01314 1.2e-137 yabB 2.1.1.223 L Methyltransferase
JOFJPCFG_01315 1.9e-40 yazA L endonuclease containing a URI domain
JOFJPCFG_01316 5e-250 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
JOFJPCFG_01317 5.1e-154 corA P CorA-like protein
JOFJPCFG_01318 2.5e-62 yjqA S Bacterial PH domain
JOFJPCFG_01319 2.3e-99 thiT S Thiamine transporter
JOFJPCFG_01320 7.4e-11 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
JOFJPCFG_01321 4.5e-126 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
JOFJPCFG_01322 2e-198 yjbB G Permeases of the major facilitator superfamily
JOFJPCFG_01323 8.9e-300 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
JOFJPCFG_01324 3.4e-106 ywaF S Integral membrane protein (intg_mem_TP0381)
JOFJPCFG_01325 8.9e-259 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
JOFJPCFG_01329 2e-155 cjaA ET ABC transporter substrate-binding protein
JOFJPCFG_01330 1.2e-135 glnQ 3.6.3.21 E abc transporter atp-binding protein
JOFJPCFG_01331 7.8e-107 P ABC transporter (Permease
JOFJPCFG_01332 6e-115 papP P ABC transporter (Permease
JOFJPCFG_01333 7.1e-192 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
JOFJPCFG_01334 2.3e-30 copZ 2.7.7.77 P Heavy metal-associated domain protein
JOFJPCFG_01335 0.0 copA 3.6.3.54 P P-type ATPase
JOFJPCFG_01336 1.4e-72 copY K Copper transport repressor, CopY TcrY family
JOFJPCFG_01337 4.1e-144 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
JOFJPCFG_01338 5.4e-228 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
JOFJPCFG_01339 3.6e-100 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E belongs to the TrpF family
JOFJPCFG_01340 4.6e-132 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
JOFJPCFG_01341 1.3e-177 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JOFJPCFG_01342 1.8e-104 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH anthranilate
JOFJPCFG_01343 1.4e-256 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JOFJPCFG_01344 1.1e-41 pchB 2.5.1.19, 4.2.1.10, 4.2.99.21, 5.4.99.5 E Chorismate mutase
JOFJPCFG_01345 4.2e-56
JOFJPCFG_01346 0.0 ctpE P E1-E2 ATPase
JOFJPCFG_01347 7e-32 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
JOFJPCFG_01348 6e-13 L transposase activity
JOFJPCFG_01349 4.1e-66 K transcriptional regulator, MerR family
JOFJPCFG_01350 1.3e-105 dnaQ 2.7.7.7 L DNA polymerase III
JOFJPCFG_01351 9.1e-42 WQ51_02910 S Protein of unknown function, DUF536
JOFJPCFG_01352 4.8e-63 XK27_02560 S cog cog2151
JOFJPCFG_01353 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
JOFJPCFG_01354 7.7e-227 ytfP S Flavoprotein
JOFJPCFG_01356 1.2e-120 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
JOFJPCFG_01357 1.2e-151 ytmP 2.7.1.89 M Phosphotransferase
JOFJPCFG_01358 1.8e-179 ecsB U ABC transporter
JOFJPCFG_01359 2.3e-133 ecsA V abc transporter atp-binding protein
JOFJPCFG_01360 5e-72 hit FG Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
JOFJPCFG_01362 0.0 clpL O ATP-dependent Clp protease ATP-binding subunit
JOFJPCFG_01363 7.2e-203 ylbM S Belongs to the UPF0348 family
JOFJPCFG_01364 2e-140 yqeM Q Methyltransferase domain protein
JOFJPCFG_01365 2.3e-57 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
JOFJPCFG_01366 1.4e-107 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
JOFJPCFG_01367 3.1e-118 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JOFJPCFG_01368 3.5e-49 yhbY J RNA-binding protein
JOFJPCFG_01369 1.7e-215 yqeH S in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
JOFJPCFG_01370 1.8e-98 yqeG S hydrolase of the HAD superfamily
JOFJPCFG_01371 5.4e-151 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
JOFJPCFG_01372 1.1e-40
JOFJPCFG_01373 7.8e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JOFJPCFG_01374 9.1e-270 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
JOFJPCFG_01375 1.4e-47 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JOFJPCFG_01376 1.8e-30 M lipopolysaccharide 3-alpha-galactosyltransferase activity
JOFJPCFG_01377 3.7e-243 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
JOFJPCFG_01378 1.6e-96 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JOFJPCFG_01379 5.3e-153 hlpA M Belongs to the NlpA lipoprotein family
JOFJPCFG_01380 6.8e-101 pncA Q isochorismatase
JOFJPCFG_01381 1.2e-140 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
JOFJPCFG_01382 3.7e-240 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase
JOFJPCFG_01383 4.4e-74 XK27_03180 T universal stress protein
JOFJPCFG_01386 3.7e-156 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JOFJPCFG_01387 2e-239 hlyX S COG1253 Hemolysins and related proteins containing CBS domains
JOFJPCFG_01388 5.6e-133 modF 3.6.3.21, 3.6.3.34 P abc transporter atp-binding protein
JOFJPCFG_01389 0.0 yjcE P NhaP-type Na H and K H antiporters
JOFJPCFG_01391 3.5e-97 ytqB 2.1.1.176 J (SAM)-dependent
JOFJPCFG_01392 1.3e-184 yhcC S radical SAM protein
JOFJPCFG_01393 1.9e-195 ylbL T Belongs to the peptidase S16 family
JOFJPCFG_01394 7.8e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JOFJPCFG_01395 5.1e-93 rsmD 2.1.1.171 L Methyltransferase
JOFJPCFG_01396 7.2e-172 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
JOFJPCFG_01397 1.9e-09 S Protein of unknown function (DUF4059)
JOFJPCFG_01398 7.2e-130 tcyN 3.6.3.21 E abc transporter atp-binding protein
JOFJPCFG_01399 5.8e-172 yxeN P ABC transporter (Permease
JOFJPCFG_01400 4.4e-152 yxeM ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
JOFJPCFG_01402 1.3e-204 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JOFJPCFG_01403 0.0 pflB 2.3.1.54 C formate acetyltransferase'
JOFJPCFG_01404 1.1e-141 cah 4.2.1.1 P carbonic anhydrase
JOFJPCFG_01405 4.6e-85 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
JOFJPCFG_01406 1e-48 hsdS_1 3.1.21.3 V type I restriction modification DNA specificity domain
JOFJPCFG_01407 2e-43 D nuclear chromosome segregation
JOFJPCFG_01408 1.7e-31 D nuclear chromosome segregation
JOFJPCFG_01409 4.1e-80 L DNA integration
JOFJPCFG_01410 3.7e-79 XK27_05540 S Gram-negative-bacterium-type cell wall biogenesis
JOFJPCFG_01411 1.2e-29 S DUF218 domain
JOFJPCFG_01412 1.5e-127 ybbM S transport system, permease component
JOFJPCFG_01413 1.2e-115 ybbL S abc transporter atp-binding protein
JOFJPCFG_01414 4.5e-185 ampC V COG1680 Beta-lactamase class C and other penicillin binding proteins
JOFJPCFG_01415 1.7e-139 cppA E CppA N-terminal
JOFJPCFG_01416 6.2e-50 L Transposase and inactivated derivatives IS30 family
JOFJPCFG_01417 2.3e-164 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
JOFJPCFG_01418 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
JOFJPCFG_01420 3.2e-74 L integrase core domain
JOFJPCFG_01422 3e-128 agrA KT phosphorelay signal transduction system
JOFJPCFG_01423 9.2e-82 blpH 2.7.13.3 T protein histidine kinase activity
JOFJPCFG_01424 1.8e-145 blpH 2.7.13.3 T protein histidine kinase activity
JOFJPCFG_01426 1.7e-233 mesE M Transport protein ComB
JOFJPCFG_01427 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
JOFJPCFG_01428 0.0 mdlB V abc transporter atp-binding protein
JOFJPCFG_01429 0.0 mdlA V abc transporter atp-binding protein
JOFJPCFG_01431 5e-93 XK27_09885 V Glycopeptide antibiotics resistance protein
JOFJPCFG_01432 2.3e-223 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
JOFJPCFG_01433 1.9e-71 yutD J protein conserved in bacteria
JOFJPCFG_01434 3.7e-268 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
JOFJPCFG_01436 3.6e-220 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
JOFJPCFG_01437 1.1e-184 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JOFJPCFG_01438 0.0 ftsI 3.4.16.4 M penicillin-binding protein
JOFJPCFG_01439 1.1e-45 ftsL D cell division protein FtsL
JOFJPCFG_01440 3.9e-173 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
JOFJPCFG_01441 1.4e-141
JOFJPCFG_01442 1.1e-32 yhaI J Protein of unknown function (DUF805)
JOFJPCFG_01443 1.1e-16 D nuclear chromosome segregation
JOFJPCFG_01444 5.8e-225 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
JOFJPCFG_01445 2.2e-140 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JOFJPCFG_01446 5.3e-139 XK27_00765
JOFJPCFG_01447 2.2e-131 ecsA_2 V abc transporter atp-binding protein
JOFJPCFG_01448 2.8e-89 S Protein of unknown function (DUF554)
JOFJPCFG_01449 6e-16 S Protein of unknown function (DUF554)
JOFJPCFG_01450 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
JOFJPCFG_01451 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
JOFJPCFG_01452 6.3e-40 liaI S membrane
JOFJPCFG_01453 5.4e-10 XK27_02470 K LytTr DNA-binding domain protein
JOFJPCFG_01454 9.3e-68 KT response to antibiotic
JOFJPCFG_01455 2.9e-16 KT response to antibiotic
JOFJPCFG_01456 2e-83 yebC M Membrane
JOFJPCFG_01457 2.9e-18 yebC M Membrane
JOFJPCFG_01458 6.2e-260 XK27_03190 5.2.1.8 S hydrolases of the HAD superfamily
JOFJPCFG_01459 5.5e-172 ansA 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
JOFJPCFG_01460 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JOFJPCFG_01461 5.8e-184 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JOFJPCFG_01462 4.1e-62 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
JOFJPCFG_01463 1.7e-176 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JOFJPCFG_01464 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
JOFJPCFG_01466 6.7e-189 manA 5.3.1.8 G mannose-6-phosphate isomerase
JOFJPCFG_01467 4.1e-172 scrK 2.7.1.2, 2.7.1.4 GK Fructokinase
JOFJPCFG_01468 0.0 scrA 2.7.1.211 G pts system
JOFJPCFG_01469 4.1e-291 scrB 3.2.1.26 GH32 G invertase
JOFJPCFG_01470 1.1e-178 scrR K Transcriptional
JOFJPCFG_01471 2.1e-73 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JOFJPCFG_01472 3.4e-62 yqhY S protein conserved in bacteria
JOFJPCFG_01473 2.1e-97 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JOFJPCFG_01474 3.7e-84 comEB 3.5.4.12 F ComE operon protein 2
JOFJPCFG_01475 1.5e-192 pepP 3.4.11.9, 3.4.13.9 E Belongs to the peptidase M24B family
JOFJPCFG_01478 8e-39 V 'abc transporter, ATP-binding protein
JOFJPCFG_01479 2e-46 V 'abc transporter, ATP-binding protein
JOFJPCFG_01482 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
JOFJPCFG_01483 2e-169 corA P COG0598 Mg2 and Co2 transporters
JOFJPCFG_01484 2.6e-123 XK27_01040 S Pfam PF06570
JOFJPCFG_01486 9.7e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JOFJPCFG_01487 2.7e-91 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
JOFJPCFG_01488 3.9e-47 rpsF J Binds together with S18 to 16S ribosomal RNA
JOFJPCFG_01489 2.8e-41 XK27_05745
JOFJPCFG_01490 6.3e-226 mutY L A G-specific adenine glycosylase
JOFJPCFG_01495 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JOFJPCFG_01496 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
JOFJPCFG_01497 1e-93 cvpA S toxin biosynthetic process
JOFJPCFG_01498 2.3e-13 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
JOFJPCFG_01499 2e-132 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JOFJPCFG_01500 1.8e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
JOFJPCFG_01501 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
JOFJPCFG_01502 2e-47 azlD E branched-chain amino acid
JOFJPCFG_01503 9.4e-116 azlC E AzlC protein
JOFJPCFG_01504 1.9e-186 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JOFJPCFG_01505 1.3e-73 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
JOFJPCFG_01506 2.8e-120 yeaZ 2.3.1.234 O COG1214, inactive homolog of metal-dependent proteases
JOFJPCFG_01507 2.5e-33 ykzG S Belongs to the UPF0356 family
JOFJPCFG_01508 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JOFJPCFG_01509 1.6e-40 pscB M CHAP domain protein
JOFJPCFG_01510 2e-263 glnA 6.3.1.2 E glutamine synthetase
JOFJPCFG_01511 3.6e-61 glnR K Transcriptional regulator
JOFJPCFG_01512 6.7e-87 S Fusaric acid resistance protein-like
JOFJPCFG_01513 1.9e-12
JOFJPCFG_01514 2.2e-221 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
JOFJPCFG_01515 3.2e-34 L transposase activity
JOFJPCFG_01516 5e-31 L Integrase core domain protein
JOFJPCFG_01517 9.6e-186 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
JOFJPCFG_01518 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JOFJPCFG_01519 5.6e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
JOFJPCFG_01520 2.3e-69 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
JOFJPCFG_01521 7e-142 purR 2.4.2.7 F operon repressor
JOFJPCFG_01522 2.4e-178 cbf S 3'-5' exoribonuclease yhaM
JOFJPCFG_01523 1.5e-172 rmuC S RmuC domain protein
JOFJPCFG_01524 1.7e-116 thiN 2.7.6.2 H thiamine pyrophosphokinase
JOFJPCFG_01525 1.1e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
JOFJPCFG_01526 9.9e-163 rsgA 3.1.3.100 G One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
JOFJPCFG_01528 4.4e-155 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
JOFJPCFG_01529 1.1e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JOFJPCFG_01530 4.1e-144 tatD L Hydrolase, tatd
JOFJPCFG_01531 4.2e-74 yccU S CoA-binding protein
JOFJPCFG_01532 1.1e-50 trxA O Belongs to the thioredoxin family
JOFJPCFG_01533 3.9e-142 S Macro domain protein
JOFJPCFG_01534 1e-08 L thioesterase
JOFJPCFG_01535 2.2e-54 bta 1.8.1.8 CO cell redox homeostasis
JOFJPCFG_01537 1e-223 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
JOFJPCFG_01538 6.5e-84 L Transposase
JOFJPCFG_01539 1e-13 rpmH J Ribosomal protein L34
JOFJPCFG_01540 3.1e-17 1.6.5.2 S NADPH-quinone reductase (modulator of drug activity B)
JOFJPCFG_01541 6.5e-185 jag S RNA-binding protein
JOFJPCFG_01542 7.5e-141 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
JOFJPCFG_01543 1.2e-55 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
JOFJPCFG_01544 1.9e-264 argH 4.3.2.1 E Argininosuccinate lyase
JOFJPCFG_01545 2e-230 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
JOFJPCFG_01546 2.1e-282 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JOFJPCFG_01547 1.4e-81 amiA E transmembrane transport
JOFJPCFG_01548 4.2e-74 amiA E transmembrane transport
JOFJPCFG_01549 4.8e-120 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
JOFJPCFG_01550 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
JOFJPCFG_01551 9.2e-51 S Protein of unknown function (DUF3397)
JOFJPCFG_01552 2e-88 cah 4.2.1.1 P Reversible hydration of carbon dioxide
JOFJPCFG_01553 5.8e-37 WQ51_05710 S Mitochondrial biogenesis AIM24
JOFJPCFG_01554 1.8e-11 WQ51_05710 S Mitochondrial biogenesis AIM24
JOFJPCFG_01555 4e-226 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JOFJPCFG_01556 9.1e-80 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
JOFJPCFG_01557 2.4e-19 XK27_09620 S FMN reductase (NADPH) activity
JOFJPCFG_01558 2.6e-74 XK27_09620 S reductase
JOFJPCFG_01559 8.2e-21 XK27_09615 C reductase
JOFJPCFG_01560 1.3e-134 XK27_09615 C reductase
JOFJPCFG_01561 1.1e-07 fnt P Formate nitrite transporter
JOFJPCFG_01562 4.7e-91 fnt P Formate nitrite transporter
JOFJPCFG_01563 8.7e-83 XK27_08585 S Psort location CytoplasmicMembrane, score
JOFJPCFG_01564 1.3e-185 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
JOFJPCFG_01565 5.1e-170 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
JOFJPCFG_01566 2.4e-116 gluP 3.4.21.105 O membrane protein (homolog of Drosophila rhomboid)
JOFJPCFG_01567 4.5e-94 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JOFJPCFG_01568 1e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
JOFJPCFG_01569 8.1e-59 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
JOFJPCFG_01570 2.1e-21 S glycolate biosynthetic process
JOFJPCFG_01571 1.2e-64 S phosphatase activity
JOFJPCFG_01572 1.3e-156 rrmA 2.1.1.187 Q methyltransferase
JOFJPCFG_01575 1.1e-89 tadA 3.5.4.1, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
JOFJPCFG_01576 4.7e-64 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
JOFJPCFG_01577 3.2e-36 yeeD O sulfur carrier activity
JOFJPCFG_01578 1.1e-189 yeeE S Sulphur transport
JOFJPCFG_01579 7.9e-114 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
JOFJPCFG_01580 2.1e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
JOFJPCFG_01581 1.8e-09 S Domain of unknown function (DUF4651)
JOFJPCFG_01582 2e-205 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
JOFJPCFG_01583 2e-130 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JOFJPCFG_01584 4.3e-110 S CAAX amino terminal protease family protein
JOFJPCFG_01587 4.2e-66 V CAAX protease self-immunity
JOFJPCFG_01588 4.7e-27 V CAAX protease self-immunity
JOFJPCFG_01589 8.8e-27 lanR K sequence-specific DNA binding
JOFJPCFG_01590 3.5e-219 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JOFJPCFG_01591 6.5e-176 ytxK 2.1.1.72 L DNA methylase
JOFJPCFG_01592 6.8e-13 comGF U Putative Competence protein ComGF
JOFJPCFG_01593 2.9e-70 comGF U Competence protein ComGF
JOFJPCFG_01594 1.4e-15 NU Type II secretory pathway pseudopilin
JOFJPCFG_01595 1.2e-56 cglD NU Competence protein
JOFJPCFG_01596 1.9e-42 comGC U Required for transformation and DNA binding
JOFJPCFG_01597 5.9e-152 cglB NU type II secretion system
JOFJPCFG_01598 1.1e-175 comGA NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JOFJPCFG_01599 1.1e-67 S cog cog4699
JOFJPCFG_01600 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JOFJPCFG_01601 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JOFJPCFG_01602 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
JOFJPCFG_01603 2.1e-238 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JOFJPCFG_01604 1.6e-196 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
JOFJPCFG_01605 2.2e-76 ilvN 2.2.1.6 E Acetolactate synthase
JOFJPCFG_01606 0.0 ilvB 2.2.1.6 EH Acetolactate synthase
JOFJPCFG_01607 2.7e-74 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
JOFJPCFG_01608 5.3e-37 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
JOFJPCFG_01609 1.3e-147 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
JOFJPCFG_01610 2.7e-302 yloV S kinase related to dihydroxyacetone kinase
JOFJPCFG_01611 1.4e-57 asp S cog cog1302
JOFJPCFG_01612 9.3e-226 norN V Mate efflux family protein
JOFJPCFG_01613 7.1e-278 thrC 4.2.3.1 E Threonine synthase
JOFJPCFG_01615 1.3e-60 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
JOFJPCFG_01616 1.2e-35 adhE 1.1.1.1, 1.2.1.10 C hydroxyacid-oxoacid transhydrogenase activity
JOFJPCFG_01617 2.3e-75 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
JOFJPCFG_01618 1.8e-62 1.1.1.1, 1.1.99.1, 1.2.1.10, 1.2.1.18, 1.2.1.27, 1.2.1.3 C Dehydrogenase
JOFJPCFG_01619 1.2e-25 1.1.1.1, 1.1.99.1, 1.2.1.10, 1.2.1.18, 1.2.1.27, 1.2.1.3 C Dehydrogenase
JOFJPCFG_01620 3.1e-63 adhE 1.1.1.1, 1.2.1.10 C Dehydrogenase
JOFJPCFG_01621 0.0 pepO 3.4.24.71 O Peptidase family M13
JOFJPCFG_01622 2e-36 treC 3.2.1.93 GH13 G COG0366 Glycosidases
JOFJPCFG_01623 1.3e-45 treC 3.2.1.93 GH13 G COG0366 Glycosidases
JOFJPCFG_01624 6e-79 treC 3.2.1.93 GH13 G COG0366 Glycosidases
JOFJPCFG_01625 3.7e-55 treB 2.7.1.201 G PTS System
JOFJPCFG_01626 5.8e-21 treR K DNA-binding transcription factor activity
JOFJPCFG_01627 2.8e-38 treR K trehalose operon
JOFJPCFG_01628 1.4e-93 ywlG S Belongs to the UPF0340 family
JOFJPCFG_01631 2.7e-13 L PFAM Integrase, catalytic core
JOFJPCFG_01632 2.4e-164 fba 4.1.2.13, 4.1.2.29 G aldolase
JOFJPCFG_01634 6.8e-26 6.3.2.2 H ergothioneine biosynthetic process
JOFJPCFG_01635 2.8e-64 6.3.2.2 H gamma-glutamylcysteine synthetase
JOFJPCFG_01636 3.2e-12 6.3.2.2 H gamma-glutamylcysteine synthetase
JOFJPCFG_01637 4.3e-12 L PFAM Integrase, catalytic core
JOFJPCFG_01638 2.6e-94 L PFAM Integrase, catalytic core
JOFJPCFG_01639 3.3e-62 rplQ J ribosomal protein l17
JOFJPCFG_01640 4.8e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JOFJPCFG_01641 9.6e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JOFJPCFG_01642 4e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
JOFJPCFG_01643 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
JOFJPCFG_01644 2.7e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
JOFJPCFG_01645 9.2e-121 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
JOFJPCFG_01646 9.6e-231 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
JOFJPCFG_01647 7.4e-58 rplO J binds to the 23S rRNA
JOFJPCFG_01648 2.5e-23 rpmD J ribosomal protein l30
JOFJPCFG_01649 1.7e-79 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
JOFJPCFG_01650 1.1e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
JOFJPCFG_01651 2.3e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
JOFJPCFG_01652 1.2e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JOFJPCFG_01653 1.5e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JOFJPCFG_01654 1.2e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
JOFJPCFG_01655 1.1e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
JOFJPCFG_01656 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
JOFJPCFG_01657 2e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JOFJPCFG_01658 2.7e-26 rpmC J Belongs to the universal ribosomal protein uL29 family
JOFJPCFG_01659 7.2e-71 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JOFJPCFG_01660 3.6e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
JOFJPCFG_01661 7.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
JOFJPCFG_01662 4.9e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
JOFJPCFG_01663 8.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JOFJPCFG_01664 2.4e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
JOFJPCFG_01665 5.7e-104 rplD J Forms part of the polypeptide exit tunnel
JOFJPCFG_01666 1.8e-110 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JOFJPCFG_01667 1.3e-48 rpsJ J Involved in the binding of tRNA to the ribosomes
JOFJPCFG_01668 7.8e-188 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
JOFJPCFG_01669 0.0 XK27_09800 I Acyltransferase
JOFJPCFG_01670 2.4e-34 XK27_09805 S MORN repeat protein
JOFJPCFG_01671 7.5e-79 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JOFJPCFG_01672 2.7e-249 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
JOFJPCFG_01673 2e-82 adk 2.7.4.3 F topology modulation protein
JOFJPCFG_01674 2.3e-81 Z012_04635 K sequence-specific DNA binding
JOFJPCFG_01675 6e-158 KLT serine threonine protein kinase
JOFJPCFG_01676 3.8e-145 KLT serine threonine protein kinase
JOFJPCFG_01677 8.7e-67 V ABC transporter
JOFJPCFG_01678 4.2e-184 V ABC transporter
JOFJPCFG_01679 2.4e-13 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
JOFJPCFG_01680 3.6e-35 Z012_04635 K sequence-specific DNA binding
JOFJPCFG_01681 1.3e-69 Z012_04635 K sequence-specific DNA binding
JOFJPCFG_01683 8e-79 C Radical SAM
JOFJPCFG_01684 1.3e-104 C Radical SAM
JOFJPCFG_01685 7.3e-286 V ABC transporter transmembrane region
JOFJPCFG_01687 5.2e-237 rarA L ATPase related to the helicase subunit of the Holliday junction resolvase
JOFJPCFG_01688 8.4e-27 rpmB J Belongs to the bacterial ribosomal protein bL28 family
JOFJPCFG_01689 2.2e-44 yrzL S Belongs to the UPF0297 family
JOFJPCFG_01690 9.5e-71 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JOFJPCFG_01691 1.3e-45 yrzB S Belongs to the UPF0473 family
JOFJPCFG_01692 1e-293 ccs S the current gene model (or a revised gene model) may contain a frame shift
JOFJPCFG_01693 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
JOFJPCFG_01694 7.5e-14
JOFJPCFG_01695 2.8e-116 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JOFJPCFG_01696 5e-145 yaaA S Belongs to the UPF0246 family
JOFJPCFG_01697 1.1e-164 XK27_01785 S cog cog1284
JOFJPCFG_01698 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
JOFJPCFG_01700 3.5e-225 hisS 6.1.1.21 J histidyl-tRNA synthetase
JOFJPCFG_01701 1.9e-135 metE 2.1.1.14 E Methionine synthase
JOFJPCFG_01702 4.1e-36 metE 2.1.1.14 E Methionine synthase
JOFJPCFG_01703 2e-25 rpmF J Belongs to the bacterial ribosomal protein bL32 family
JOFJPCFG_01704 6.7e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
JOFJPCFG_01707 1.1e-82 yegS 2.7.1.107 I Diacylglycerol kinase
JOFJPCFG_01709 8.5e-97 S Hydrophobic domain protein
JOFJPCFG_01711 3.7e-27 S Membrane
JOFJPCFG_01712 2e-100
JOFJPCFG_01713 1.8e-23 S Small integral membrane protein
JOFJPCFG_01714 9.4e-66 M Protein conserved in bacteria
JOFJPCFG_01715 1.4e-11 K CsbD-like
JOFJPCFG_01716 8.9e-101 nudL L hydrolase
JOFJPCFG_01717 3.4e-13 nudL L hydrolase
JOFJPCFG_01719 5.2e-35 K transcriptional regulator, PadR family
JOFJPCFG_01721 1.2e-13 XK27_06920 S Protein of unknown function (DUF1700)
JOFJPCFG_01722 2e-157 XK27_06930 V domain protein
JOFJPCFG_01723 6.4e-96 XK27_06935 K transcriptional regulator
JOFJPCFG_01724 4.1e-54 ypaA S membrane
JOFJPCFG_01725 9.8e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
JOFJPCFG_01726 8.2e-48 veg S Biofilm formation stimulator VEG
JOFJPCFG_01727 1.5e-245 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
JOFJPCFG_01728 3.9e-70 rplI J binds to the 23S rRNA
JOFJPCFG_01729 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
JOFJPCFG_01730 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
JOFJPCFG_01731 4.7e-218 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
JOFJPCFG_01732 0.0 S Bacterial membrane protein, YfhO
JOFJPCFG_01733 1.5e-67 isaA GH23 M Immunodominant staphylococcal antigen A
JOFJPCFG_01734 1.3e-91 lytE M LysM domain protein
JOFJPCFG_01735 2.2e-137 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JOFJPCFG_01736 5.2e-153 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JOFJPCFG_01737 4.4e-152 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JOFJPCFG_01738 1.2e-89 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JOFJPCFG_01739 2e-136 ymfM S sequence-specific DNA binding
JOFJPCFG_01740 2.3e-240 ymfH S Peptidase M16
JOFJPCFG_01741 1.8e-234 ymfF S Peptidase M16
JOFJPCFG_01742 1.6e-45 yaaA S S4 domain protein YaaA
JOFJPCFG_01743 2.2e-204 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JOFJPCFG_01744 5.6e-275 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
JOFJPCFG_01745 6.3e-193 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
JOFJPCFG_01746 1.2e-152 yvjA S membrane
JOFJPCFG_01747 1.9e-305 ybiT S abc transporter atp-binding protein
JOFJPCFG_01748 0.0 XK27_10405 S Bacterial membrane protein YfhO
JOFJPCFG_01752 1.1e-119 yoaK S Psort location CytoplasmicMembrane, score
JOFJPCFG_01753 1.1e-86 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
JOFJPCFG_01754 9.6e-196 htrA 3.4.21.107 O Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain'
JOFJPCFG_01755 8.5e-134 parB K Belongs to the ParB family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)