ORF_ID e_value Gene_name EC_number CAZy COGs Description
PNFHMCLD_00001 2e-247 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PNFHMCLD_00002 7.7e-208 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PNFHMCLD_00003 5e-37 yaaA S S4 domain protein YaaA
PNFHMCLD_00004 1.9e-206 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PNFHMCLD_00005 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PNFHMCLD_00006 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PNFHMCLD_00007 1.5e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
PNFHMCLD_00008 1e-59 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PNFHMCLD_00009 6.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PNFHMCLD_00010 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PNFHMCLD_00011 1.4e-67 rplI J Binds to the 23S rRNA
PNFHMCLD_00012 7.8e-242 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PNFHMCLD_00013 8.8e-226 yttB EGP Major facilitator Superfamily
PNFHMCLD_00014 3.6e-143 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PNFHMCLD_00015 1.9e-228 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PNFHMCLD_00017 4.2e-276 E ABC transporter, substratebinding protein
PNFHMCLD_00018 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PNFHMCLD_00019 1.5e-214 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PNFHMCLD_00020 1.1e-182 glgD 2.4.1.21, 2.7.7.27 GT5 G Nucleotidyl transferase
PNFHMCLD_00021 6.8e-278 glgA 2.4.1.21 GT5 F Synthesizes alpha-1,4-glucan chains using ADP-glucose
PNFHMCLD_00022 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PNFHMCLD_00023 0.0 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
PNFHMCLD_00025 4.5e-143 S haloacid dehalogenase-like hydrolase
PNFHMCLD_00026 1e-119 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PNFHMCLD_00027 0.0 trePP 2.4.1.216, 2.4.1.8, 3.1.3.12, 3.2.1.28 GH37,GH65 G Glycosyl hydrolase family 65 central catalytic domain
PNFHMCLD_00028 1.3e-78 S Pyridoxamine 5'-phosphate oxidase
PNFHMCLD_00029 1.6e-31 cspA K Cold shock protein domain
PNFHMCLD_00030 1.7e-37
PNFHMCLD_00032 6.2e-131 K response regulator
PNFHMCLD_00033 0.0 vicK 2.7.13.3 T Histidine kinase
PNFHMCLD_00034 1.2e-244 yycH S YycH protein
PNFHMCLD_00035 2.2e-151 yycI S YycH protein
PNFHMCLD_00036 8.9e-158 vicX 3.1.26.11 S domain protein
PNFHMCLD_00037 6.8e-173 htrA 3.4.21.107 O serine protease
PNFHMCLD_00038 1.2e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PNFHMCLD_00039 1.2e-10 S Mor transcription activator family
PNFHMCLD_00043 3.2e-27 L Replication initiation factor
PNFHMCLD_00045 4e-33 L COG1961 Site-specific recombinases, DNA invertase Pin homologs
PNFHMCLD_00046 4.2e-106 L L COG1961 Site-specific recombinases, DNA invertase Pin homologs
PNFHMCLD_00047 7.2e-09 3.1.3.16 S Protein of unknown function (DUF1643)
PNFHMCLD_00048 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
PNFHMCLD_00049 3.4e-212 hsdM 2.1.1.72 V type I restriction-modification system
PNFHMCLD_00050 6.5e-80 3.1.21.3 V Type I restriction modification DNA specificity domain
PNFHMCLD_00051 1.5e-95 K Bacterial regulatory proteins, tetR family
PNFHMCLD_00052 8.3e-260 calB 1.2.1.68 C Belongs to the aldehyde dehydrogenase family
PNFHMCLD_00053 1.5e-167 L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
PNFHMCLD_00054 1.8e-121 ung2 3.2.2.27 L Uracil-DNA glycosylase
PNFHMCLD_00055 3.7e-122 pnb C nitroreductase
PNFHMCLD_00056 5.2e-65 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
PNFHMCLD_00057 1.8e-116 S Elongation factor G-binding protein, N-terminal
PNFHMCLD_00058 0.0 nqr 1.3.5.4, 1.5.1.36 C FMN_bind
PNFHMCLD_00059 1.3e-257 P Sodium:sulfate symporter transmembrane region
PNFHMCLD_00060 5.7e-158 K LysR family
PNFHMCLD_00061 1e-72 C FMN binding
PNFHMCLD_00062 1.1e-74 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PNFHMCLD_00063 2.3e-164 ptlF S KR domain
PNFHMCLD_00064 4.2e-155 adc 4.1.1.4 Q Acetoacetate decarboxylase (ADC)
PNFHMCLD_00065 1.3e-122 drgA C Nitroreductase family
PNFHMCLD_00066 1.3e-290 QT PucR C-terminal helix-turn-helix domain
PNFHMCLD_00067 2.7e-120 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PNFHMCLD_00068 6.7e-195 pva1 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PNFHMCLD_00069 7.4e-250 yjjP S Putative threonine/serine exporter
PNFHMCLD_00070 1.3e-134 wzb 3.1.3.48 T Tyrosine phosphatase family
PNFHMCLD_00071 2.6e-253 1.14.14.9 Q 4-hydroxyphenylacetate
PNFHMCLD_00072 2.9e-81 6.3.3.2 S ASCH
PNFHMCLD_00073 3.2e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
PNFHMCLD_00074 5.5e-172 yobV1 K WYL domain
PNFHMCLD_00075 1.6e-117 azoR C Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PNFHMCLD_00076 0.0 tetP J elongation factor G
PNFHMCLD_00077 8.2e-39 S Protein of unknown function
PNFHMCLD_00078 5.5e-62 S Protein of unknown function
PNFHMCLD_00079 3.6e-152 EG EamA-like transporter family
PNFHMCLD_00080 3.6e-93 MA20_25245 K FR47-like protein
PNFHMCLD_00081 9.6e-51 hchA S DJ-1/PfpI family
PNFHMCLD_00082 5.4e-181 1.1.1.1 C nadph quinone reductase
PNFHMCLD_00083 9.3e-50 K helix_turn_helix, Arsenical Resistance Operon Repressor
PNFHMCLD_00084 1.5e-220 mepA V MATE efflux family protein
PNFHMCLD_00085 6.5e-167 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
PNFHMCLD_00086 7.7e-140 S Belongs to the UPF0246 family
PNFHMCLD_00087 6e-76
PNFHMCLD_00088 3.2e-308 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
PNFHMCLD_00089 7e-141
PNFHMCLD_00091 1.5e-141 2.7.7.47 H Mediates bacterial resistance to the antibiotics streptomycin and spectomycin
PNFHMCLD_00092 4.8e-40
PNFHMCLD_00093 7.8e-129 cbiO P ABC transporter
PNFHMCLD_00094 2.6e-149 P Cobalt transport protein
PNFHMCLD_00095 1.8e-181 nikMN P PDGLE domain
PNFHMCLD_00096 4.2e-121 K Crp-like helix-turn-helix domain
PNFHMCLD_00097 1e-240 larA 5.1.2.1 S Domain of unknown function (DUF2088)
PNFHMCLD_00098 2.6e-124 larB S AIR carboxylase
PNFHMCLD_00099 1.8e-131 larC 4.99.1.12 S Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
PNFHMCLD_00100 5e-75 larC 4.99.1.12 S Protein of unknown function DUF111
PNFHMCLD_00101 1.5e-132 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PNFHMCLD_00102 6.3e-151 larE S NAD synthase
PNFHMCLD_00103 5.5e-178 1.6.5.5 C Zinc-binding dehydrogenase
PNFHMCLD_00104 1.1e-136 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PNFHMCLD_00105 5.3e-150 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PNFHMCLD_00106 1.2e-205 cytX U Belongs to the purine-cytosine permease (2.A.39) family
PNFHMCLD_00107 4.3e-135 S peptidase C26
PNFHMCLD_00108 9.8e-302 L HIRAN domain
PNFHMCLD_00109 3.4e-85 F NUDIX domain
PNFHMCLD_00110 2.6e-250 yifK E Amino acid permease
PNFHMCLD_00111 5.2e-122
PNFHMCLD_00112 3.3e-149 ydjP I Alpha/beta hydrolase family
PNFHMCLD_00113 0.0 pacL1 P P-type ATPase
PNFHMCLD_00114 2.9e-142 2.4.2.3 F Phosphorylase superfamily
PNFHMCLD_00115 1.6e-28 KT PspC domain
PNFHMCLD_00116 3.6e-111 S NADPH-dependent FMN reductase
PNFHMCLD_00117 1.2e-74 papX3 K Transcriptional regulator
PNFHMCLD_00118 4.6e-73 hsp1 O Belongs to the small heat shock protein (HSP20) family
PNFHMCLD_00119 5.8e-82 S Protein of unknown function (DUF3021)
PNFHMCLD_00120 4.7e-227 mdtG EGP Major facilitator Superfamily
PNFHMCLD_00121 5e-51 cadC1 K helix_turn_helix, Arsenical Resistance Operon Repressor
PNFHMCLD_00122 8.1e-216 yeaN P Transporter, major facilitator family protein
PNFHMCLD_00124 3.4e-160 S reductase
PNFHMCLD_00125 6.7e-86 1.1.1.65 C Aldo keto reductase
PNFHMCLD_00126 5.8e-39 1.1.1.65 C Aldo keto reductase
PNFHMCLD_00127 4.5e-82 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase like
PNFHMCLD_00128 0.0 lai 4.2.1.53 S Myosin-crossreactive antigen
PNFHMCLD_00130 1.4e-11
PNFHMCLD_00131 2.2e-258
PNFHMCLD_00132 4e-209 C Oxidoreductase
PNFHMCLD_00133 4.9e-151 cbiQ P cobalt transport
PNFHMCLD_00134 0.0 ykoD P ABC transporter, ATP-binding protein
PNFHMCLD_00135 1.6e-97 S UPF0397 protein
PNFHMCLD_00137 1.6e-129 K UbiC transcription regulator-associated domain protein
PNFHMCLD_00138 1.8e-53 K Transcriptional regulator PadR-like family
PNFHMCLD_00139 9.6e-141
PNFHMCLD_00140 3.4e-149
PNFHMCLD_00141 9.1e-89
PNFHMCLD_00142 1.6e-143 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
PNFHMCLD_00143 2e-169 yjjC V ABC transporter
PNFHMCLD_00144 7.4e-297 M Exporter of polyketide antibiotics
PNFHMCLD_00145 1.2e-115 K Transcriptional regulator
PNFHMCLD_00146 1.8e-276 C Electron transfer flavoprotein FAD-binding domain
PNFHMCLD_00147 4.3e-73 folT 2.7.13.3 T ECF transporter, substrate-specific component
PNFHMCLD_00149 7.1e-92 K Bacterial regulatory proteins, tetR family
PNFHMCLD_00150 1.2e-188 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PNFHMCLD_00151 2.1e-185 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PNFHMCLD_00152 5.5e-101 dhaL 2.7.1.121 S Dak2
PNFHMCLD_00153 9e-57 dhaM 2.7.1.121 S PTS system fructose IIA component
PNFHMCLD_00154 2.8e-131 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PNFHMCLD_00155 1e-190 malR K Transcriptional regulator, LacI family
PNFHMCLD_00156 2e-180 yvdE K helix_turn _helix lactose operon repressor
PNFHMCLD_00157 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
PNFHMCLD_00158 1.2e-230 mdxE G Bacterial extracellular solute-binding protein
PNFHMCLD_00159 2.2e-227 malC P Binding-protein-dependent transport system inner membrane component
PNFHMCLD_00160 1.4e-161 malD P ABC transporter permease
PNFHMCLD_00161 1.6e-149 malA S maltodextrose utilization protein MalA
PNFHMCLD_00162 2.5e-258 malS 3.2.1.1 GH13 G Glycogen debranching enzyme, glucanotransferase domain
PNFHMCLD_00163 4e-209 msmK P Belongs to the ABC transporter superfamily
PNFHMCLD_00164 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PNFHMCLD_00165 0.0 3.2.1.96 G Glycosyl hydrolase family 85
PNFHMCLD_00166 2e-45 ygbF S Sugar efflux transporter for intercellular exchange
PNFHMCLD_00167 1.8e-169 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PNFHMCLD_00168 0.0 rafA 3.2.1.22 G alpha-galactosidase
PNFHMCLD_00169 1.9e-17 rafA 3.2.1.22 G alpha-galactosidase
PNFHMCLD_00170 0.0 scrA 2.7.1.193, 2.7.1.211, 5.3.1.1 G phosphotransferase system
PNFHMCLD_00171 1.5e-304 scrB 3.2.1.26 GH32 G invertase
PNFHMCLD_00172 9.1e-173 scrR K Transcriptional regulator, LacI family
PNFHMCLD_00173 0.0 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
PNFHMCLD_00174 1.4e-164 3.5.1.10 C nadph quinone reductase
PNFHMCLD_00175 1.1e-217 nhaC C Na H antiporter NhaC
PNFHMCLD_00176 3.9e-300 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
PNFHMCLD_00177 1.7e-165 mleR K LysR substrate binding domain
PNFHMCLD_00178 0.0 3.6.4.13 M domain protein
PNFHMCLD_00180 3e-156 hipB K Helix-turn-helix
PNFHMCLD_00181 0.0 oppA E ABC transporter, substratebinding protein
PNFHMCLD_00182 1.8e-309 oppA E ABC transporter, substratebinding protein
PNFHMCLD_00183 5.9e-79 yiaC K Acetyltransferase (GNAT) domain
PNFHMCLD_00184 2.3e-215 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PNFHMCLD_00185 7e-203 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PNFHMCLD_00186 3e-113 pgm1 G phosphoglycerate mutase
PNFHMCLD_00187 1.1e-178 yghZ C Aldo keto reductase family protein
PNFHMCLD_00188 4.9e-34
PNFHMCLD_00189 1.3e-60 S Domain of unknown function (DU1801)
PNFHMCLD_00190 2.9e-162 FbpA K Domain of unknown function (DUF814)
PNFHMCLD_00191 4.5e-219 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PNFHMCLD_00193 3.5e-58 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PNFHMCLD_00194 8.5e-50 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PNFHMCLD_00195 3.2e-196 S ATPases associated with a variety of cellular activities
PNFHMCLD_00196 1.2e-174 L Transposase and inactivated derivatives, IS30 family
PNFHMCLD_00197 2.4e-50 S ATPases associated with a variety of cellular activities
PNFHMCLD_00198 3.1e-116 P cobalt transport
PNFHMCLD_00199 5.3e-259 P ABC transporter
PNFHMCLD_00200 3.1e-101 S ABC transporter permease
PNFHMCLD_00201 4.8e-90 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
PNFHMCLD_00202 1.4e-158 dkgB S reductase
PNFHMCLD_00203 5.3e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PNFHMCLD_00204 1e-69
PNFHMCLD_00205 4.7e-31 ygzD K Transcriptional
PNFHMCLD_00206 7.4e-132 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PNFHMCLD_00207 2.2e-173 P Major Facilitator Superfamily
PNFHMCLD_00208 1.5e-194 1.3.5.4 C FAD dependent oxidoreductase
PNFHMCLD_00210 4.8e-99 K Helix-turn-helix domain
PNFHMCLD_00211 7.4e-277 pipD E Dipeptidase
PNFHMCLD_00212 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
PNFHMCLD_00213 0.0 mtlR K Mga helix-turn-helix domain
PNFHMCLD_00214 1.7e-78 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PNFHMCLD_00215 9.5e-222 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
PNFHMCLD_00216 2.1e-73
PNFHMCLD_00217 6.2e-57 trxA1 O Belongs to the thioredoxin family
PNFHMCLD_00218 1.2e-49
PNFHMCLD_00219 2.1e-94
PNFHMCLD_00220 7.7e-62
PNFHMCLD_00221 5e-81 ndk 2.7.4.6 F Belongs to the NDK family
PNFHMCLD_00222 8.4e-254 S Uncharacterized protein conserved in bacteria (DUF2252)
PNFHMCLD_00223 3.5e-97 yieF S NADPH-dependent FMN reductase
PNFHMCLD_00224 7.2e-95 cysE 2.3.1.30 E Bacterial transferase hexapeptide (six repeats)
PNFHMCLD_00225 1.3e-210 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PNFHMCLD_00226 2.5e-164 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PNFHMCLD_00227 7.8e-159 map 3.4.11.18 E Methionine Aminopeptidase
PNFHMCLD_00228 4.3e-141 pnuC H nicotinamide mononucleotide transporter
PNFHMCLD_00229 7.3e-43 S Protein of unknown function (DUF2089)
PNFHMCLD_00230 2.9e-42
PNFHMCLD_00231 3.5e-129 treR K UTRA
PNFHMCLD_00232 0.0 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
PNFHMCLD_00233 0.0 treB 2.7.1.193, 2.7.1.211 G phosphotransferase system
PNFHMCLD_00234 0.0 pts4ABC 2.7.1.193, 2.7.1.211 G phosphotransferase system, EIIB
PNFHMCLD_00235 1.4e-144
PNFHMCLD_00236 4.9e-72 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
PNFHMCLD_00237 5.8e-238 tagF1 2.7.8.12, 2.7.8.45 M glycerophosphotransferase
PNFHMCLD_00238 0.0 tagF2 2.7.8.12 H CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PNFHMCLD_00239 5.9e-100 ubiX 2.5.1.129 H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
PNFHMCLD_00240 3.5e-70
PNFHMCLD_00241 1.8e-72 K Transcriptional regulator
PNFHMCLD_00242 3.7e-120 K Bacterial regulatory proteins, tetR family
PNFHMCLD_00243 6.5e-233 mntH P H( )-stimulated, divalent metal cation uptake system
PNFHMCLD_00244 5.1e-116
PNFHMCLD_00245 5.9e-38
PNFHMCLD_00246 1.4e-40
PNFHMCLD_00247 1.1e-251 ydiC1 EGP Major facilitator Superfamily
PNFHMCLD_00248 3.3e-65 K helix_turn_helix, mercury resistance
PNFHMCLD_00249 2e-250 T PhoQ Sensor
PNFHMCLD_00250 7e-127 K Transcriptional regulatory protein, C terminal
PNFHMCLD_00251 3.5e-48
PNFHMCLD_00252 2.7e-129 yidA K Helix-turn-helix domain, rpiR family
PNFHMCLD_00253 1e-243 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PNFHMCLD_00254 9.9e-57
PNFHMCLD_00255 2.1e-41
PNFHMCLD_00256 3.2e-184 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PNFHMCLD_00257 7.1e-256 loxD 1.1.3.15 C FAD linked oxidases, C-terminal domain
PNFHMCLD_00258 1.3e-47
PNFHMCLD_00259 2.7e-123 2.7.6.5 S RelA SpoT domain protein
PNFHMCLD_00260 3.1e-104 K transcriptional regulator
PNFHMCLD_00261 0.0 ydgH S MMPL family
PNFHMCLD_00262 1.1e-106 tag 3.2.2.20 L glycosylase
PNFHMCLD_00263 0.0 XK27_00720 S Leucine-rich repeat (LRR) protein
PNFHMCLD_00264 1.8e-185 yclI V MacB-like periplasmic core domain
PNFHMCLD_00265 7.1e-121 yclH V ABC transporter
PNFHMCLD_00266 6.3e-113 V CAAX protease self-immunity
PNFHMCLD_00267 4.5e-121 S CAAX protease self-immunity
PNFHMCLD_00268 1.7e-52 M Lysin motif
PNFHMCLD_00269 3.6e-53 lytE M LysM domain protein
PNFHMCLD_00270 7.4e-67 gcvH E Glycine cleavage H-protein
PNFHMCLD_00271 2.8e-176 sepS16B
PNFHMCLD_00272 1.8e-130
PNFHMCLD_00273 0.0 dinG 3.1.12.1, 3.6.4.12 KL DEAD_2
PNFHMCLD_00274 6.8e-57
PNFHMCLD_00275 8.9e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PNFHMCLD_00276 4.9e-24 elaA S GNAT family
PNFHMCLD_00277 1.7e-75 K Transcriptional regulator
PNFHMCLD_00278 3e-226 ndh 1.6.99.3 C NADH dehydrogenase
PNFHMCLD_00279 4.3e-40
PNFHMCLD_00280 1.5e-205 potD P ABC transporter
PNFHMCLD_00281 2.9e-140 potC P ABC transporter permease
PNFHMCLD_00282 4.5e-149 potB P ABC transporter permease
PNFHMCLD_00283 3.1e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PNFHMCLD_00284 2.9e-96 puuR K Cupin domain
PNFHMCLD_00285 1.1e-83 6.3.3.2 S ASCH
PNFHMCLD_00286 3e-84 K GNAT family
PNFHMCLD_00287 8e-91 K acetyltransferase
PNFHMCLD_00288 8.1e-22
PNFHMCLD_00289 1.4e-59 ytrA K helix_turn_helix gluconate operon transcriptional repressor
PNFHMCLD_00290 2e-163 ytrB V ABC transporter
PNFHMCLD_00291 4.9e-190
PNFHMCLD_00292 1.1e-256 adhE 1.1.1.1, 1.2.1.10 C Aldehyde dehydrogenase family
PNFHMCLD_00293 2.8e-162 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PNFHMCLD_00295 1.5e-239 xylP1 G MFS/sugar transport protein
PNFHMCLD_00296 8.7e-122 qmcA O prohibitin homologues
PNFHMCLD_00297 1.1e-29
PNFHMCLD_00298 1.8e-175 L Transposase and inactivated derivatives, IS30 family
PNFHMCLD_00299 6.5e-281 pipD E Dipeptidase
PNFHMCLD_00300 3e-40
PNFHMCLD_00301 6.8e-96 bioY S BioY family
PNFHMCLD_00302 1.1e-175 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PNFHMCLD_00303 1.8e-61 S CHY zinc finger
PNFHMCLD_00304 7.8e-222 mtnE 2.6.1.83 E Aminotransferase
PNFHMCLD_00305 3.8e-218
PNFHMCLD_00306 6e-154 tagG U Transport permease protein
PNFHMCLD_00307 1e-201 tagH 3.6.3.38, 3.6.3.40 GM Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PNFHMCLD_00308 8.4e-44
PNFHMCLD_00309 2.8e-91 K Transcriptional regulator PadR-like family
PNFHMCLD_00310 6e-258 P Major Facilitator Superfamily
PNFHMCLD_00311 4.7e-241 amtB P ammonium transporter
PNFHMCLD_00312 4.5e-177 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PNFHMCLD_00313 3.7e-44
PNFHMCLD_00314 5.3e-101 zmp1 O Zinc-dependent metalloprotease
PNFHMCLD_00315 4.6e-120 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PNFHMCLD_00316 1.5e-310 mco Q Multicopper oxidase
PNFHMCLD_00317 1.1e-54 ypaA S Protein of unknown function (DUF1304)
PNFHMCLD_00318 8.8e-95 yxkA S Phosphatidylethanolamine-binding protein
PNFHMCLD_00319 1.8e-231 flhF N Uncharacterized conserved protein (DUF2075)
PNFHMCLD_00320 9.3e-83 ywnA K Winged helix-turn-helix transcription repressor, HrcA DNA-binding
PNFHMCLD_00321 9.3e-80
PNFHMCLD_00322 1.9e-69 accB 2.3.1.12 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PNFHMCLD_00323 4.5e-174 rihC 3.2.2.1 F Nucleoside
PNFHMCLD_00324 3.9e-162 vdlC S Belongs to the short-chain dehydrogenases reductases (SDR) family
PNFHMCLD_00325 3.8e-78 3.1.26.4 L RNA-DNA hybrid ribonuclease activity
PNFHMCLD_00326 1.4e-276 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PNFHMCLD_00327 9.9e-180 proV E ABC transporter, ATP-binding protein
PNFHMCLD_00328 2.6e-255 gshR 1.8.1.7 C Glutathione reductase
PNFHMCLD_00329 1.3e-300 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PNFHMCLD_00330 0.0 glpD 1.1.3.21, 1.1.5.3 C C-terminal domain of alpha-glycerophosphate oxidase
PNFHMCLD_00331 4.7e-134 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PNFHMCLD_00332 3.3e-237 M domain protein
PNFHMCLD_00333 5.1e-52 U domain, Protein
PNFHMCLD_00334 4.4e-25 S Immunity protein 74
PNFHMCLD_00335 4.8e-176
PNFHMCLD_00336 8.1e-08 S Immunity protein 22
PNFHMCLD_00337 1.3e-99 ankB S ankyrin repeats
PNFHMCLD_00338 6.3e-221 L Transposase
PNFHMCLD_00339 4.4e-69 2.7.13.3 T GHKL domain
PNFHMCLD_00340 1.1e-133 plnD K LytTr DNA-binding domain
PNFHMCLD_00341 2.2e-129 S CAAX protease self-immunity
PNFHMCLD_00342 2.4e-22 plnF
PNFHMCLD_00344 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PNFHMCLD_00345 1.4e-240 mesE M Transport protein ComB
PNFHMCLD_00346 5.7e-97 L PFAM Integrase catalytic region
PNFHMCLD_00347 9.5e-52 Z012_00440 L transposase activity
PNFHMCLD_00348 3e-85
PNFHMCLD_00349 3.2e-176 J tRNA cytidylyltransferase activity
PNFHMCLD_00350 1.6e-39 L Transposase
PNFHMCLD_00351 2e-48 L 4.5 Transposon and IS
PNFHMCLD_00353 1.3e-08 S Protein of unknown function (DUF2929)
PNFHMCLD_00354 1.8e-96 tnpR1 L Resolvase, N terminal domain
PNFHMCLD_00355 1.1e-291 norB EGP Major Facilitator
PNFHMCLD_00356 9e-96 K Bacterial regulatory proteins, tetR family
PNFHMCLD_00357 7.3e-133 D CobQ CobB MinD ParA nucleotide binding domain protein
PNFHMCLD_00359 3.7e-138 repA S Replication initiator protein A
PNFHMCLD_00360 1.5e-43 relB L Addiction module antitoxin, RelB DinJ family
PNFHMCLD_00361 9.8e-40
PNFHMCLD_00362 1.8e-25
PNFHMCLD_00363 0.0 traA L MobA MobL family protein
PNFHMCLD_00364 1e-29 traI 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PNFHMCLD_00365 3.3e-212 traI 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PNFHMCLD_00366 1.1e-30
PNFHMCLD_00367 5.1e-188 L Psort location Cytoplasmic, score
PNFHMCLD_00368 7.3e-75 K Acetyltransferase (GNAT) domain
PNFHMCLD_00369 2.7e-43 czcD P Cation diffusion facilitator family transporter
PNFHMCLD_00370 2.3e-122 norB EGP Major Facilitator
PNFHMCLD_00371 3.5e-16 K helix_turn_helix multiple antibiotic resistance protein
PNFHMCLD_00372 1.7e-20 L COG3547 Transposase and inactivated derivatives
PNFHMCLD_00373 4.3e-102 L COG3547 Transposase and inactivated derivatives
PNFHMCLD_00374 8e-68 C lyase activity
PNFHMCLD_00375 3e-14
PNFHMCLD_00376 2.2e-75 L COG2801 Transposase and inactivated derivatives
PNFHMCLD_00377 1.4e-174 S nuclear-transcribed mRNA catabolic process, no-go decay
PNFHMCLD_00382 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PNFHMCLD_00383 2.9e-241 mesE M Transport protein ComB
PNFHMCLD_00384 1.1e-108 S CAAX protease self-immunity
PNFHMCLD_00385 7.4e-118 ypbD S CAAX protease self-immunity
PNFHMCLD_00386 1.2e-110 V CAAX protease self-immunity
PNFHMCLD_00387 1.1e-113 S CAAX protease self-immunity
PNFHMCLD_00388 1.8e-47 higA K Helix-turn-helix XRE-family like proteins
PNFHMCLD_00389 0.0 helD 3.6.4.12 L DNA helicase
PNFHMCLD_00390 1.1e-141 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
PNFHMCLD_00391 5.9e-191 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PNFHMCLD_00392 9e-130 K UbiC transcription regulator-associated domain protein
PNFHMCLD_00393 1.9e-253 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PNFHMCLD_00394 3.9e-24
PNFHMCLD_00395 4.9e-75 S Domain of unknown function (DUF3284)
PNFHMCLD_00396 4.8e-34
PNFHMCLD_00397 2.8e-58 chpA T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PNFHMCLD_00398 4e-190 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PNFHMCLD_00399 8.2e-168 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PNFHMCLD_00400 4e-229 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PNFHMCLD_00401 9e-173
PNFHMCLD_00402 3.9e-133 cobB K SIR2 family
PNFHMCLD_00403 2e-160 yunF F Protein of unknown function DUF72
PNFHMCLD_00404 5.2e-71 mutT 3.6.1.55 F DNA mismatch repair protein MutT
PNFHMCLD_00405 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PNFHMCLD_00406 2e-214 bcr1 EGP Major facilitator Superfamily
PNFHMCLD_00407 1.3e-83 mutR K sequence-specific DNA binding
PNFHMCLD_00409 1.5e-146 tatD L hydrolase, TatD family
PNFHMCLD_00410 4.7e-97 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PNFHMCLD_00411 1.5e-158 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PNFHMCLD_00412 3.2e-37 veg S Biofilm formation stimulator VEG
PNFHMCLD_00413 1.5e-163 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PNFHMCLD_00414 1.3e-181 S Prolyl oligopeptidase family
PNFHMCLD_00415 9.8e-129 fhuC 3.6.3.35 P ABC transporter
PNFHMCLD_00416 9.2e-131 znuB U ABC 3 transport family
PNFHMCLD_00417 1.8e-42 ankB S ankyrin repeats
PNFHMCLD_00418 2.1e-31
PNFHMCLD_00419 6.6e-148 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
PNFHMCLD_00420 3.9e-206 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PNFHMCLD_00421 1.2e-149 bla1 3.5.2.6 V Beta-lactamase enzyme family
PNFHMCLD_00422 1.2e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PNFHMCLD_00423 1.1e-184 S DUF218 domain
PNFHMCLD_00424 2.2e-126
PNFHMCLD_00425 1.2e-163 L PFAM Integrase catalytic region
PNFHMCLD_00426 1.7e-88 L Helix-turn-helix domain
PNFHMCLD_00427 7.5e-149 yxeH S hydrolase
PNFHMCLD_00428 9e-264 ywfO S HD domain protein
PNFHMCLD_00429 4.7e-157 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
PNFHMCLD_00430 3.8e-78 ywiB S Domain of unknown function (DUF1934)
PNFHMCLD_00431 4e-46 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PNFHMCLD_00432 3.4e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PNFHMCLD_00433 4.7e-246 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PNFHMCLD_00434 3.1e-229 tdcC E amino acid
PNFHMCLD_00435 9.8e-123 sdaAB 4.3.1.17 E Serine dehydratase beta chain
PNFHMCLD_00436 7.6e-158 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PNFHMCLD_00437 6.4e-131 S YheO-like PAS domain
PNFHMCLD_00438 2.5e-26
PNFHMCLD_00439 3.6e-238 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PNFHMCLD_00440 6.6e-240 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PNFHMCLD_00441 7.8e-41 rpmE2 J Ribosomal protein L31
PNFHMCLD_00442 3.2e-214 J translation release factor activity
PNFHMCLD_00443 9.2e-127 srtA 3.4.22.70 M sortase family
PNFHMCLD_00444 1.4e-90 lemA S LemA family
PNFHMCLD_00445 4.6e-139 htpX O Belongs to the peptidase M48B family
PNFHMCLD_00446 2e-146
PNFHMCLD_00447 3.6e-260 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PNFHMCLD_00448 6.6e-258 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PNFHMCLD_00449 1e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PNFHMCLD_00450 1.4e-214 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PNFHMCLD_00451 1.6e-64 ndoA L Toxic component of a toxin-antitoxin (TA) module
PNFHMCLD_00452 0.0 kup P Transport of potassium into the cell
PNFHMCLD_00453 2.9e-193 P ABC transporter, substratebinding protein
PNFHMCLD_00454 2.2e-129 ssuC2 U Binding-protein-dependent transport system inner membrane component
PNFHMCLD_00455 1.9e-133 P ATPases associated with a variety of cellular activities
PNFHMCLD_00456 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PNFHMCLD_00457 2.2e-204 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PNFHMCLD_00458 3.2e-189 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PNFHMCLD_00459 2.6e-230 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PNFHMCLD_00460 9.4e-130 argB 2.7.2.8 F Belongs to the acetylglutamate kinase family. ArgB subfamily
PNFHMCLD_00461 5.1e-215 argD 2.6.1.11, 2.6.1.17 E acetylornithine
PNFHMCLD_00462 3.6e-188 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PNFHMCLD_00463 4.1e-84 S QueT transporter
PNFHMCLD_00464 2.1e-114 S (CBS) domain
PNFHMCLD_00465 4.2e-264 S Putative peptidoglycan binding domain
PNFHMCLD_00466 3.5e-177 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PNFHMCLD_00467 1.5e-100 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PNFHMCLD_00468 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PNFHMCLD_00469 3.5e-283 yabM S Polysaccharide biosynthesis protein
PNFHMCLD_00470 2.2e-42 yabO J S4 domain protein
PNFHMCLD_00472 1.1e-63 divIC D Septum formation initiator
PNFHMCLD_00473 3.1e-74 yabR J RNA binding
PNFHMCLD_00474 2.2e-254 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PNFHMCLD_00475 1.7e-96 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PNFHMCLD_00476 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PNFHMCLD_00477 1.2e-163 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PNFHMCLD_00478 1.1e-189 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PNFHMCLD_00479 3e-292 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PNFHMCLD_00482 1.5e-42 S COG NOG38524 non supervised orthologous group
PNFHMCLD_00485 3e-252 dtpT U amino acid peptide transporter
PNFHMCLD_00486 6.4e-150 yjjH S Calcineurin-like phosphoesterase
PNFHMCLD_00490 1.2e-49 5.3.3.19 S Cupin 2, conserved barrel domain protein
PNFHMCLD_00491 2.5e-53 S Cupin domain
PNFHMCLD_00492 1.6e-165 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
PNFHMCLD_00493 1.4e-193 ybiR P Citrate transporter
PNFHMCLD_00494 1.6e-151 pnuC H nicotinamide mononucleotide transporter
PNFHMCLD_00495 1.7e-137 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PNFHMCLD_00496 6.1e-221 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PNFHMCLD_00497 1.6e-123 gntR1 K UbiC transcription regulator-associated domain protein
PNFHMCLD_00498 8.7e-136 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PNFHMCLD_00499 1.5e-288 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PNFHMCLD_00500 4.7e-154 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PNFHMCLD_00501 0.0 pacL 3.6.3.8 P P-type ATPase
PNFHMCLD_00502 3.4e-71
PNFHMCLD_00503 0.0 yhgF K Tex-like protein N-terminal domain protein
PNFHMCLD_00504 9.8e-82 ydcK S Belongs to the SprT family
PNFHMCLD_00505 4e-237 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
PNFHMCLD_00506 2.9e-154 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PNFHMCLD_00508 2.5e-119 G Peptidase_C39 like family
PNFHMCLD_00509 1.3e-168 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PNFHMCLD_00510 3.4e-133 manY G PTS system
PNFHMCLD_00511 4.4e-169 manN G system, mannose fructose sorbose family IID component
PNFHMCLD_00512 4.7e-64 S Domain of unknown function (DUF956)
PNFHMCLD_00513 0.0 levR K Sigma-54 interaction domain
PNFHMCLD_00514 4.3e-71 pts10A 2.7.1.191 G PTS system fructose IIA component
PNFHMCLD_00515 3.1e-87 pts10B 2.7.1.191, 2.7.1.202 G PTS system sorbose subfamily IIB component
PNFHMCLD_00516 5.4e-178 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PNFHMCLD_00517 9.7e-65 accB 2.3.1.12 I Biotin-requiring enzyme
PNFHMCLD_00518 9.8e-247 accC2 6.3.4.14, 6.4.1.2 I Biotin carboxylase C-terminal domain
PNFHMCLD_00519 8.3e-140 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PNFHMCLD_00520 7.7e-135 accA 2.1.3.15, 6.4.1.2 I Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
PNFHMCLD_00521 2.4e-167 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PNFHMCLD_00522 3.3e-167 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
PNFHMCLD_00523 8.3e-177 EG EamA-like transporter family
PNFHMCLD_00524 9.5e-129 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PNFHMCLD_00525 5.2e-113 zmp2 O Zinc-dependent metalloprotease
PNFHMCLD_00526 7.3e-258 pepC 3.4.22.40 E Peptidase C1-like family
PNFHMCLD_00527 3.2e-124 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PNFHMCLD_00528 1.2e-51 HA62_12640 S GCN5-related N-acetyl-transferase
PNFHMCLD_00529 3.6e-99 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
PNFHMCLD_00530 4.9e-257 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PNFHMCLD_00531 3.7e-205 yacL S domain protein
PNFHMCLD_00532 8.9e-289 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PNFHMCLD_00533 2.3e-270 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PNFHMCLD_00534 3.5e-70 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PNFHMCLD_00535 3.3e-138 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PNFHMCLD_00536 1.2e-97 yacP S YacP-like NYN domain
PNFHMCLD_00537 3.1e-42 sigH K Sigma-70 region 2
PNFHMCLD_00538 6.5e-22 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PNFHMCLD_00539 6.8e-29 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PNFHMCLD_00540 3.7e-99 nusG K Participates in transcription elongation, termination and antitermination
PNFHMCLD_00541 2.6e-158 S Alpha/beta hydrolase of unknown function (DUF915)
PNFHMCLD_00542 2.4e-69 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PNFHMCLD_00543 5.1e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PNFHMCLD_00544 4.6e-80 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PNFHMCLD_00545 9.9e-56 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PNFHMCLD_00546 9.3e-178 F DNA/RNA non-specific endonuclease
PNFHMCLD_00547 1.2e-38 L nuclease
PNFHMCLD_00548 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PNFHMCLD_00549 4.6e-108 yvdD 3.2.2.10 S Belongs to the LOG family
PNFHMCLD_00550 2.2e-198 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PNFHMCLD_00551 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PNFHMCLD_00552 6.5e-37 nrdH O Glutaredoxin
PNFHMCLD_00553 3.4e-109 rsmC 2.1.1.172 J Methyltransferase
PNFHMCLD_00554 5.9e-91 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PNFHMCLD_00555 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PNFHMCLD_00556 5.8e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PNFHMCLD_00557 7.4e-109 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PNFHMCLD_00558 2.2e-38 yaaL S Protein of unknown function (DUF2508)
PNFHMCLD_00559 3.3e-118 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PNFHMCLD_00560 2.4e-53 yaaQ S Cyclic-di-AMP receptor
PNFHMCLD_00561 3.3e-186 holB 2.7.7.7 L DNA polymerase III
PNFHMCLD_00562 1e-57 yabA L Involved in initiation control of chromosome replication
PNFHMCLD_00563 1.1e-164 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PNFHMCLD_00564 2.1e-148 fat 3.1.2.21 I Acyl-ACP thioesterase
PNFHMCLD_00565 4e-192 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PNFHMCLD_00566 1.5e-211 phnW 2.5.1.49, 2.6.1.37, 3.11.1.1 E Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily
PNFHMCLD_00567 8.5e-145 phnX 2.6.1.37, 3.1.3.18, 3.11.1.1 E Belongs to the HAD-like hydrolase superfamily. PhnX family
PNFHMCLD_00568 2.6e-144 phnE1 3.6.1.63 U ABC transporter permease
PNFHMCLD_00569 7.7e-138 phnE 3.6.1.63 U Phosphonate ABC transporter permease
PNFHMCLD_00570 2.8e-137 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PNFHMCLD_00571 9.6e-178 phnD P Phosphonate ABC transporter
PNFHMCLD_00572 1.7e-128 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PNFHMCLD_00573 6.7e-101 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PNFHMCLD_00574 1e-81 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PNFHMCLD_00575 1.5e-194 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PNFHMCLD_00576 3.3e-307 uup S ABC transporter, ATP-binding protein
PNFHMCLD_00577 1.4e-119 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PNFHMCLD_00578 6.1e-109 ydiL S CAAX protease self-immunity
PNFHMCLD_00579 1e-31 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PNFHMCLD_00580 8.5e-293 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PNFHMCLD_00581 0.0 ydaO E amino acid
PNFHMCLD_00582 2.7e-181 tagO 2.7.8.33, 2.7.8.35 M transferase
PNFHMCLD_00583 4.3e-145 pstS P Phosphate
PNFHMCLD_00584 1.7e-114 yvyE 3.4.13.9 S YigZ family
PNFHMCLD_00585 4.3e-258 comFA L Helicase C-terminal domain protein
PNFHMCLD_00586 7.5e-126 comFC S Competence protein
PNFHMCLD_00587 3.5e-100 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PNFHMCLD_00588 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PNFHMCLD_00589 4.1e-203 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PNFHMCLD_00590 7.9e-216 minJ O Domain present in PSD-95, Dlg, and ZO-1/2.
PNFHMCLD_00591 1.5e-132 K response regulator
PNFHMCLD_00592 3.5e-250 phoR 2.7.13.3 T Histidine kinase
PNFHMCLD_00593 1.1e-150 pstS P Phosphate
PNFHMCLD_00594 2.6e-161 pstC P probably responsible for the translocation of the substrate across the membrane
PNFHMCLD_00595 1.5e-155 pstA P Phosphate transport system permease protein PstA
PNFHMCLD_00596 1.1e-147 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PNFHMCLD_00597 5e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PNFHMCLD_00598 1.8e-116 phoU P Plays a role in the regulation of phosphate uptake
PNFHMCLD_00599 2e-49 pspC KT positive regulation of macromolecule biosynthetic process
PNFHMCLD_00600 9.2e-54 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
PNFHMCLD_00601 1.4e-176 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PNFHMCLD_00602 2.3e-164 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PNFHMCLD_00603 5.9e-183 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PNFHMCLD_00604 2.1e-171 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PNFHMCLD_00605 1.9e-124 yliE T Putative diguanylate phosphodiesterase
PNFHMCLD_00606 3.3e-269 nox C NADH oxidase
PNFHMCLD_00607 1.7e-176 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PNFHMCLD_00608 2e-109 yviA S Protein of unknown function (DUF421)
PNFHMCLD_00609 1.1e-61 S Protein of unknown function (DUF3290)
PNFHMCLD_00610 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PNFHMCLD_00611 4.3e-132 yliE T Putative diguanylate phosphodiesterase
PNFHMCLD_00612 1.4e-259 nox S Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PNFHMCLD_00613 3.3e-103 ddpX 3.4.13.22 E Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
PNFHMCLD_00614 9.2e-212 norA EGP Major facilitator Superfamily
PNFHMCLD_00615 3.6e-117 yfbR S HD containing hydrolase-like enzyme
PNFHMCLD_00616 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PNFHMCLD_00617 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PNFHMCLD_00618 6.7e-89 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PNFHMCLD_00619 1.8e-231 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PNFHMCLD_00620 7.2e-264 argH 4.3.2.1 E argininosuccinate lyase
PNFHMCLD_00621 9.3e-87 S Short repeat of unknown function (DUF308)
PNFHMCLD_00622 1.1e-161 rapZ S Displays ATPase and GTPase activities
PNFHMCLD_00623 1.9e-189 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PNFHMCLD_00624 3.7e-168 whiA K May be required for sporulation
PNFHMCLD_00625 8.9e-290 oppA E ABC transporter, substratebinding protein
PNFHMCLD_00626 2.5e-175 1.1.1.26 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PNFHMCLD_00627 3e-102 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PNFHMCLD_00629 4.2e-245 rpoN K Sigma-54 factor, core binding domain
PNFHMCLD_00630 7.3e-189 cggR K Putative sugar-binding domain
PNFHMCLD_00631 2.6e-191 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PNFHMCLD_00632 8.1e-224 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PNFHMCLD_00633 1.2e-137 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PNFHMCLD_00634 1.6e-249 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PNFHMCLD_00635 2e-131
PNFHMCLD_00636 6.6e-295 clcA P chloride
PNFHMCLD_00637 3.5e-30 secG U Preprotein translocase
PNFHMCLD_00638 5e-139 est 3.1.1.1 S Serine aminopeptidase, S33
PNFHMCLD_00639 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PNFHMCLD_00640 9.3e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PNFHMCLD_00641 0.0 3.4.21.72 M Bacterial Ig-like domain (group 3)
PNFHMCLD_00642 4.3e-256 glnP P ABC transporter
PNFHMCLD_00643 1.2e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PNFHMCLD_00644 6.1e-105 yxjI
PNFHMCLD_00645 4.4e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
PNFHMCLD_00646 1.6e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PNFHMCLD_00647 1.4e-178 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PNFHMCLD_00648 5e-81 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PNFHMCLD_00649 8.1e-88 2.3.1.128, 2.3.1.178 J Acetyltransferase (GNAT) domain
PNFHMCLD_00650 5.6e-100 dnaQ 2.7.7.7 L DNA polymerase III
PNFHMCLD_00651 1.6e-153 xth 3.1.11.2 L exodeoxyribonuclease III
PNFHMCLD_00652 3.9e-162 yceM 1.1.1.18, 1.1.1.369 S Oxidoreductase family, NAD-binding Rossmann fold
PNFHMCLD_00653 6.2e-168 murB 1.3.1.98 M Cell wall formation
PNFHMCLD_00654 0.0 yjcE P Sodium proton antiporter
PNFHMCLD_00655 1.3e-90 K helix_turn_helix multiple antibiotic resistance protein
PNFHMCLD_00656 2.1e-120 S Protein of unknown function (DUF1361)
PNFHMCLD_00657 6e-149 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PNFHMCLD_00658 1.6e-129 ybbR S YbbR-like protein
PNFHMCLD_00659 1.6e-252 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PNFHMCLD_00660 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PNFHMCLD_00661 4.5e-123 yliE T EAL domain
PNFHMCLD_00662 1.4e-147 3.1.3.23 S Sucrose-6F-phosphate phosphohydrolase
PNFHMCLD_00663 3.1e-104 K Bacterial regulatory proteins, tetR family
PNFHMCLD_00664 1e-206 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PNFHMCLD_00665 1.5e-52
PNFHMCLD_00666 3e-72
PNFHMCLD_00667 3e-131 1.5.1.39 C nitroreductase
PNFHMCLD_00668 3e-140 G Transmembrane secretion effector
PNFHMCLD_00669 3.1e-297 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PNFHMCLD_00670 2.1e-143
PNFHMCLD_00672 1.9e-71 spxA 1.20.4.1 P ArsC family
PNFHMCLD_00673 1.5e-33
PNFHMCLD_00674 2.5e-89 V VanZ like family
PNFHMCLD_00675 6e-242 EGP Major facilitator Superfamily
PNFHMCLD_00676 3.2e-175 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PNFHMCLD_00677 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PNFHMCLD_00678 1.8e-289 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PNFHMCLD_00679 2.5e-152 licD M LicD family
PNFHMCLD_00680 1.3e-82 K Transcriptional regulator
PNFHMCLD_00681 1.5e-19
PNFHMCLD_00682 6.1e-225 pbuG S permease
PNFHMCLD_00683 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PNFHMCLD_00684 1.8e-153 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PNFHMCLD_00685 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PNFHMCLD_00686 5.4e-180 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
PNFHMCLD_00687 5.9e-180 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PNFHMCLD_00688 0.0 oatA I Acyltransferase
PNFHMCLD_00689 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PNFHMCLD_00690 1.9e-68 O OsmC-like protein
PNFHMCLD_00691 2.6e-46
PNFHMCLD_00692 1.1e-251 yfnA E Amino Acid
PNFHMCLD_00693 2.5e-88
PNFHMCLD_00694 1.6e-146 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PNFHMCLD_00695 4.6e-73 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
PNFHMCLD_00696 1.8e-19
PNFHMCLD_00697 1.2e-103 gmk2 2.7.4.8 F Guanylate kinase
PNFHMCLD_00698 1.8e-80 zur P Belongs to the Fur family
PNFHMCLD_00699 1.7e-88 L Helix-turn-helix domain
PNFHMCLD_00700 2e-163 L PFAM Integrase catalytic region
PNFHMCLD_00701 7.1e-12 3.2.1.14 GH18
PNFHMCLD_00702 1.9e-147
PNFHMCLD_00703 8.8e-113 gph 3.1.3.18 S HAD hydrolase, family IA, variant
PNFHMCLD_00704 3e-210 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
PNFHMCLD_00705 4.3e-170 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PNFHMCLD_00706 3.6e-41
PNFHMCLD_00708 9e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PNFHMCLD_00709 7.8e-149 glnH ET ABC transporter substrate-binding protein
PNFHMCLD_00710 1.6e-109 gluC P ABC transporter permease
PNFHMCLD_00711 4e-108 glnP P ABC transporter permease
PNFHMCLD_00712 4.4e-83 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PNFHMCLD_00713 1.4e-153 K CAT RNA binding domain
PNFHMCLD_00714 4.4e-256 2.7.1.193, 2.7.1.211 G phosphotransferase system, EIIB
PNFHMCLD_00715 6.1e-140 G YdjC-like protein
PNFHMCLD_00716 2.1e-244 steT E amino acid
PNFHMCLD_00717 7.4e-74 mgrA K helix_turn_helix multiple antibiotic resistance protein
PNFHMCLD_00718 3.7e-149 XK27_00825 S Sulfite exporter TauE/SafE
PNFHMCLD_00719 5.7e-71 K MarR family
PNFHMCLD_00720 4.9e-210 EGP Major facilitator Superfamily
PNFHMCLD_00721 3.8e-85 S membrane transporter protein
PNFHMCLD_00722 7.1e-98 K Bacterial regulatory proteins, tetR family
PNFHMCLD_00723 8.7e-232 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PNFHMCLD_00724 2.9e-78 3.6.1.55 F NUDIX domain
PNFHMCLD_00725 1.3e-48 sugE U Multidrug resistance protein
PNFHMCLD_00726 1.2e-26
PNFHMCLD_00727 5.5e-129 pgm3 G Phosphoglycerate mutase family
PNFHMCLD_00728 4.7e-125 pgm3 G Phosphoglycerate mutase family
PNFHMCLD_00729 0.0 yjbQ P TrkA C-terminal domain protein
PNFHMCLD_00730 1.6e-177 yqkA 3.6.1.55 F Belongs to the Nudix hydrolase family
PNFHMCLD_00731 1.6e-109 dedA S SNARE associated Golgi protein
PNFHMCLD_00732 0.0 helD 3.6.4.12 L DNA helicase
PNFHMCLD_00733 5e-165 fabK 1.3.1.9 S Nitronate monooxygenase
PNFHMCLD_00734 2.5e-177 coaA 2.7.1.33 F Pantothenic acid kinase
PNFHMCLD_00735 2.5e-302 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PNFHMCLD_00737 5.2e-12 spoVK O ATPase family associated with various cellular activities (AAA)
PNFHMCLD_00738 1.8e-175 L Transposase and inactivated derivatives, IS30 family
PNFHMCLD_00739 1e-117 spoVK O ATPase family associated with various cellular activities (AAA)
PNFHMCLD_00741 7.6e-46 L Helix-turn-helix domain
PNFHMCLD_00742 2e-18 L hmm pf00665
PNFHMCLD_00743 6.9e-29 L hmm pf00665
PNFHMCLD_00744 8.9e-23 L hmm pf00665
PNFHMCLD_00745 5.6e-78
PNFHMCLD_00746 6.2e-50
PNFHMCLD_00747 1.7e-63 K Helix-turn-helix XRE-family like proteins
PNFHMCLD_00748 7.6e-110 XK27_07075 V CAAX protease self-immunity
PNFHMCLD_00749 1.1e-56 hxlR K HxlR-like helix-turn-helix
PNFHMCLD_00750 1.5e-129 L Helix-turn-helix domain
PNFHMCLD_00751 1.7e-159 L hmm pf00665
PNFHMCLD_00752 1.9e-209 EGP Major facilitator Superfamily
PNFHMCLD_00753 2.3e-143 S Cysteine-rich secretory protein family
PNFHMCLD_00754 2.2e-37 S MORN repeat
PNFHMCLD_00755 0.0 XK27_09800 I Acyltransferase family
PNFHMCLD_00756 7.1e-37 S Transglycosylase associated protein
PNFHMCLD_00757 4.4e-84
PNFHMCLD_00758 7.2e-23
PNFHMCLD_00759 8.7e-72 asp S Asp23 family, cell envelope-related function
PNFHMCLD_00760 2.6e-71 asp2 S Asp23 family, cell envelope-related function
PNFHMCLD_00761 2.8e-148 Q Fumarylacetoacetate (FAA) hydrolase family
PNFHMCLD_00762 7.9e-156 yjdB S Domain of unknown function (DUF4767)
PNFHMCLD_00763 5.3e-48 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
PNFHMCLD_00764 1.1e-101 G Glycogen debranching enzyme
PNFHMCLD_00765 0.0 pepN 3.4.11.2 E aminopeptidase
PNFHMCLD_00766 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
PNFHMCLD_00767 5.9e-299 hsdM 2.1.1.72 V type I restriction-modification system
PNFHMCLD_00768 1.5e-67 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
PNFHMCLD_00769 1.8e-175 L Transposase and inactivated derivatives, IS30 family
PNFHMCLD_00770 6.1e-171 L Belongs to the 'phage' integrase family
PNFHMCLD_00771 4.4e-08 3.1.21.3 V Type I restriction modification DNA specificity domain
PNFHMCLD_00772 6.3e-221 L Transposase
PNFHMCLD_00773 1.4e-31 3.1.21.3 V type I restriction modification DNA specificity domain
PNFHMCLD_00774 5.5e-92 XK27_09665 5.4.2.11 G Phosphoglycerate mutase family
PNFHMCLD_00775 0.0 nagH 2.7.13.3, 3.2.1.4, 3.2.1.52, 3.2.1.78, 3.2.1.8 GH20,GH26,GH5,GH9 M MucBP domain
PNFHMCLD_00777 3.5e-88 S AAA domain
PNFHMCLD_00778 2.3e-139 K sequence-specific DNA binding
PNFHMCLD_00779 2.3e-96 K Helix-turn-helix domain
PNFHMCLD_00780 9.5e-172 K Transcriptional regulator
PNFHMCLD_00781 0.0 1.3.5.4 C FMN_bind
PNFHMCLD_00783 2.3e-81 rmaD K Transcriptional regulator
PNFHMCLD_00784 6.5e-116 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PNFHMCLD_00785 5.6e-255 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PNFHMCLD_00786 9.9e-199 asnA 6.3.1.1 F aspartate--ammonia ligase
PNFHMCLD_00787 2.5e-277 pipD E Dipeptidase
PNFHMCLD_00788 1.7e-221 2.7.7.7, 3.6.4.12 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
PNFHMCLD_00789 8.5e-41
PNFHMCLD_00790 4.1e-32 L leucine-zipper of insertion element IS481
PNFHMCLD_00791 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PNFHMCLD_00792 3.4e-163 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PNFHMCLD_00793 1.5e-50 K helix_turn_helix, Arsenical Resistance Operon Repressor
PNFHMCLD_00794 7.4e-138 S NADPH-dependent FMN reductase
PNFHMCLD_00795 3.9e-179
PNFHMCLD_00796 1.4e-218 yibE S overlaps another CDS with the same product name
PNFHMCLD_00797 3.4e-127 yibF S overlaps another CDS with the same product name
PNFHMCLD_00798 2.8e-102 3.2.2.20 K FR47-like protein
PNFHMCLD_00799 3.2e-121 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PNFHMCLD_00800 5.6e-49
PNFHMCLD_00801 2.6e-191 nlhH_1 I alpha/beta hydrolase fold
PNFHMCLD_00802 1e-254 xylP2 G symporter
PNFHMCLD_00803 1.5e-280 murE 6.3.2.10, 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PNFHMCLD_00804 7.8e-219 dapG 1.1.1.3, 2.7.2.4 E Amino acid kinase family
PNFHMCLD_00805 0.0 asnB 6.3.5.4 E Asparagine synthase
PNFHMCLD_00806 9.4e-50 azlD S Branched-chain amino acid transport protein (AzlD)
PNFHMCLD_00807 1.7e-120 azlC E branched-chain amino acid
PNFHMCLD_00808 4.4e-35 yyaN K MerR HTH family regulatory protein
PNFHMCLD_00809 2.9e-106
PNFHMCLD_00810 1.4e-117 S Domain of unknown function (DUF4811)
PNFHMCLD_00811 7e-270 lmrB EGP Major facilitator Superfamily
PNFHMCLD_00812 1.7e-84 merR K MerR HTH family regulatory protein
PNFHMCLD_00813 2.6e-58
PNFHMCLD_00814 4.5e-120 sirR K iron dependent repressor
PNFHMCLD_00815 6e-31 cspC K Cold shock protein
PNFHMCLD_00816 1.5e-130 thrE S Putative threonine/serine exporter
PNFHMCLD_00817 2.2e-76 S Threonine/Serine exporter, ThrE
PNFHMCLD_00818 2.1e-188 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PNFHMCLD_00819 3.9e-119 lssY 3.6.1.27 I phosphatase
PNFHMCLD_00820 5.8e-154 I alpha/beta hydrolase fold
PNFHMCLD_00821 1.4e-98 2.3.1.128 J Acetyltransferase (GNAT) domain
PNFHMCLD_00822 3.6e-91 K Transcriptional regulator
PNFHMCLD_00823 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
PNFHMCLD_00824 1.6e-263 lysP E amino acid
PNFHMCLD_00825 9.4e-114 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
PNFHMCLD_00826 2.5e-115 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PNFHMCLD_00827 4.1e-218 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PNFHMCLD_00835 6.9e-78 ctsR K Belongs to the CtsR family
PNFHMCLD_00836 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PNFHMCLD_00837 1.5e-109 K Bacterial regulatory proteins, tetR family
PNFHMCLD_00838 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PNFHMCLD_00839 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PNFHMCLD_00840 5.3e-101 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
PNFHMCLD_00841 3.6e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PNFHMCLD_00842 5.5e-83 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PNFHMCLD_00843 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PNFHMCLD_00844 2.6e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PNFHMCLD_00845 4.4e-112 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PNFHMCLD_00846 5.5e-107 rplD J Forms part of the polypeptide exit tunnel
PNFHMCLD_00847 1.8e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PNFHMCLD_00848 8.1e-146 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PNFHMCLD_00849 8.2e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PNFHMCLD_00850 2.8e-52 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PNFHMCLD_00851 2.1e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PNFHMCLD_00852 9.2e-77 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PNFHMCLD_00853 1.4e-24 rpmC J Belongs to the universal ribosomal protein uL29 family
PNFHMCLD_00854 2.5e-40 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PNFHMCLD_00855 4.3e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PNFHMCLD_00856 2.4e-50 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PNFHMCLD_00857 3.2e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PNFHMCLD_00858 1e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PNFHMCLD_00859 1.7e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PNFHMCLD_00860 3.3e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PNFHMCLD_00861 6.8e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PNFHMCLD_00862 2.2e-24 rpmD J Ribosomal protein L30
PNFHMCLD_00863 6.3e-70 rplO J Binds to the 23S rRNA
PNFHMCLD_00864 1.5e-236 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PNFHMCLD_00865 2.1e-125 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PNFHMCLD_00866 3.9e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PNFHMCLD_00867 1.1e-59 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PNFHMCLD_00868 3.4e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PNFHMCLD_00869 5.7e-172 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PNFHMCLD_00870 2.1e-61 rplQ J Ribosomal protein L17
PNFHMCLD_00871 1.4e-181 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PNFHMCLD_00872 1.7e-94 gerCA 2.5.1.30 S Heptaprenyl diphosphate synthase component I
PNFHMCLD_00873 7.2e-86 ynhH S NusG domain II
PNFHMCLD_00874 0.0 ndh 1.6.99.3 C NADH dehydrogenase
PNFHMCLD_00875 3.5e-142 cad S FMN_bind
PNFHMCLD_00876 1.5e-208 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PNFHMCLD_00877 1.4e-153 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PNFHMCLD_00878 8.2e-165 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PNFHMCLD_00879 2.7e-143 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PNFHMCLD_00880 3.9e-150 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PNFHMCLD_00881 1.3e-78 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PNFHMCLD_00882 1.9e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
PNFHMCLD_00883 2.3e-164 degV S Uncharacterised protein, DegV family COG1307
PNFHMCLD_00884 7.4e-184 ywhK S Membrane
PNFHMCLD_00885 9.3e-203 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
PNFHMCLD_00886 0.0 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PNFHMCLD_00887 4.1e-150 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PNFHMCLD_00888 1.8e-184 aroF 2.5.1.54 E DAHP synthetase I family
PNFHMCLD_00889 1.8e-198 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PNFHMCLD_00891 1.2e-263 P Sodium:sulfate symporter transmembrane region
PNFHMCLD_00892 4.1e-53 yitW S Iron-sulfur cluster assembly protein
PNFHMCLD_00893 4.1e-115 ttdB 4.2.1.2, 4.2.1.32 C Catalyzes the reversible hydration of fumarate to (S)- malate
PNFHMCLD_00894 4.4e-177 ttdA 4.2.1.32 C Fumarate hydratase (Fumerase)
PNFHMCLD_00895 7.2e-197 K Helix-turn-helix domain
PNFHMCLD_00896 1.1e-153 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PNFHMCLD_00897 4.5e-132 mntB 3.6.3.35 P ABC transporter
PNFHMCLD_00898 8.2e-141 mtsB U ABC 3 transport family
PNFHMCLD_00899 7.9e-174 sitA P Belongs to the bacterial solute-binding protein 9 family
PNFHMCLD_00900 3.1e-50
PNFHMCLD_00901 1.2e-166 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PNFHMCLD_00902 1.7e-260 citP P Sodium:sulfate symporter transmembrane region
PNFHMCLD_00903 2.9e-179 citR K sugar-binding domain protein
PNFHMCLD_00904 3e-207 mez_1 1.1.1.38 C Malic enzyme, NAD binding domain
PNFHMCLD_00905 5.7e-189 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PNFHMCLD_00906 9e-44 citD C Covalent carrier of the coenzyme of citrate lyase
PNFHMCLD_00907 6.7e-162 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
PNFHMCLD_00908 1.7e-287 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
PNFHMCLD_00909 9.2e-256 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PNFHMCLD_00910 1.5e-261 frdC 1.3.5.4 C FAD binding domain
PNFHMCLD_00911 3.6e-94 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PNFHMCLD_00912 4.9e-162 mleR K LysR family transcriptional regulator
PNFHMCLD_00913 1.8e-167 mleR K LysR family
PNFHMCLD_00914 4.2e-308 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
PNFHMCLD_00915 1.4e-165 mleP S Sodium Bile acid symporter family
PNFHMCLD_00916 5.8e-253 yfnA E Amino Acid
PNFHMCLD_00917 3e-99 S ECF transporter, substrate-specific component
PNFHMCLD_00918 1.8e-23
PNFHMCLD_00919 6.5e-298 S Alpha beta
PNFHMCLD_00920 5.4e-275 cydA 1.10.3.14 C ubiquinol oxidase
PNFHMCLD_00921 2.6e-183 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
PNFHMCLD_00922 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PNFHMCLD_00923 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PNFHMCLD_00924 7.7e-156 ddpX 3.4.13.22 S L,D-transpeptidase catalytic domain
PNFHMCLD_00925 2.4e-182 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PNFHMCLD_00926 2.9e-165 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PNFHMCLD_00927 7.3e-183 S Oxidoreductase family, NAD-binding Rossmann fold
PNFHMCLD_00928 9e-113 acmA 3.2.1.17 NU mannosyl-glycoprotein
PNFHMCLD_00929 9.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PNFHMCLD_00930 1e-93 S UPF0316 protein
PNFHMCLD_00931 1.3e-218 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PNFHMCLD_00932 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PNFHMCLD_00933 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PNFHMCLD_00934 2.6e-198 camS S sex pheromone
PNFHMCLD_00935 3.2e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PNFHMCLD_00936 2.5e-275 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PNFHMCLD_00937 7.7e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PNFHMCLD_00938 1e-190 yegS 2.7.1.107 G Lipid kinase
PNFHMCLD_00939 4e-259 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PNFHMCLD_00940 6e-100 yobS K Bacterial regulatory proteins, tetR family
PNFHMCLD_00941 0.0 yfgQ P E1-E2 ATPase
PNFHMCLD_00942 4e-240 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PNFHMCLD_00943 6.1e-168 S Alpha/beta hydrolase of unknown function (DUF915)
PNFHMCLD_00944 2.3e-151 gntR K rpiR family
PNFHMCLD_00945 3.1e-144 lys M Glycosyl hydrolases family 25
PNFHMCLD_00946 1.1e-62 S Domain of unknown function (DUF4828)
PNFHMCLD_00947 2.7e-31 cspA K 'Cold-shock' DNA-binding domain
PNFHMCLD_00948 2.4e-189 mocA S Oxidoreductase
PNFHMCLD_00949 2.6e-239 yfmL 3.6.4.13 L DEAD DEAH box helicase
PNFHMCLD_00951 2.3e-75 T Universal stress protein family
PNFHMCLD_00952 2.9e-243 pts14C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PNFHMCLD_00953 2e-163 S Alpha/beta hydrolase of unknown function (DUF915)
PNFHMCLD_00955 1.3e-73
PNFHMCLD_00956 5e-107
PNFHMCLD_00957 3.8e-254 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
PNFHMCLD_00958 1.2e-219 pbpX1 V Beta-lactamase
PNFHMCLD_00959 1.5e-208 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PNFHMCLD_00960 1.4e-154 yihY S Belongs to the UPF0761 family
PNFHMCLD_00961 9.7e-132 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PNFHMCLD_00962 3.5e-67 L Helix-turn-helix domain
PNFHMCLD_00963 1e-40 L hmm pf00665
PNFHMCLD_00964 3.4e-82 L hmm pf00665
PNFHMCLD_00965 1.5e-155 L COG2801 Transposase and inactivated derivatives
PNFHMCLD_00966 9.8e-39 L Transposase and inactivated derivatives
PNFHMCLD_00967 3.8e-53
PNFHMCLD_00968 7.3e-33 S Protein of unknown function (DUF2922)
PNFHMCLD_00969 7e-30
PNFHMCLD_00970 1.3e-25
PNFHMCLD_00971 6.8e-101 K DNA-templated transcription, initiation
PNFHMCLD_00972 3e-125
PNFHMCLD_00973 2.2e-140 recX 2.4.1.337 GT4 S Regulatory protein RecX
PNFHMCLD_00974 4.1e-106 ygaC J Belongs to the UPF0374 family
PNFHMCLD_00975 2.5e-133 cwlO M NlpC/P60 family
PNFHMCLD_00976 7.8e-48 K sequence-specific DNA binding
PNFHMCLD_00977 1.3e-27 S Antitoxin component of a toxin-antitoxin (TA) module
PNFHMCLD_00978 5.7e-169 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PNFHMCLD_00979 9.3e-188 yueF S AI-2E family transporter
PNFHMCLD_00980 3.7e-72 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
PNFHMCLD_00981 9.5e-213 gntP EG Gluconate
PNFHMCLD_00982 4.6e-293 gntK 2.7.1.12, 2.7.1.16, 2.7.1.17, 2.7.1.5 G Belongs to the FGGY kinase family
PNFHMCLD_00983 1.7e-170 gnd 1.1.1.343, 1.1.1.44 G Dehydrogenase
PNFHMCLD_00984 8.3e-254 gor 1.8.1.7 C Glutathione reductase
PNFHMCLD_00985 6.9e-308 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PNFHMCLD_00986 1.7e-273
PNFHMCLD_00987 6.5e-198 M MucBP domain
PNFHMCLD_00988 7.1e-161 lysR5 K LysR substrate binding domain
PNFHMCLD_00989 5.5e-126 yxaA S membrane transporter protein
PNFHMCLD_00990 3.2e-57 ywjH S Protein of unknown function (DUF1634)
PNFHMCLD_00991 1.9e-308 oppA E ABC transporter, substratebinding protein
PNFHMCLD_00992 2.3e-165 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PNFHMCLD_00993 1.1e-189 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PNFHMCLD_00994 9.2e-203 oppD P Belongs to the ABC transporter superfamily
PNFHMCLD_00995 1.8e-181 oppF P Belongs to the ABC transporter superfamily
PNFHMCLD_00996 1e-63 K Winged helix DNA-binding domain
PNFHMCLD_00997 1.6e-102 L Integrase
PNFHMCLD_00998 0.0 clpE O Belongs to the ClpA ClpB family
PNFHMCLD_00999 6.5e-30
PNFHMCLD_01000 2.7e-39 ptsH G phosphocarrier protein HPR
PNFHMCLD_01001 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PNFHMCLD_01002 1.4e-223 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
PNFHMCLD_01003 6.9e-200 cpoA GT4 M Glycosyltransferase, group 1 family protein
PNFHMCLD_01004 7.4e-189 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PNFHMCLD_01005 1.9e-228 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PNFHMCLD_01006 1.1e-225 patA 2.6.1.1 E Aminotransferase
PNFHMCLD_01007 1.1e-34 ykuJ S Protein of unknown function (DUF1797)
PNFHMCLD_01008 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PNFHMCLD_01011 1.5e-42 S COG NOG38524 non supervised orthologous group
PNFHMCLD_01017 5.1e-08
PNFHMCLD_01023 2.8e-91 apt 2.4.2.22, 2.4.2.7 F Phosphoribosyl transferase domain
PNFHMCLD_01024 1.8e-182 P secondary active sulfate transmembrane transporter activity
PNFHMCLD_01025 1.4e-95
PNFHMCLD_01026 2e-94 K Acetyltransferase (GNAT) domain
PNFHMCLD_01027 1.2e-154 T Calcineurin-like phosphoesterase superfamily domain
PNFHMCLD_01029 3.7e-230 mntH P H( )-stimulated, divalent metal cation uptake system
PNFHMCLD_01030 2.6e-188 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
PNFHMCLD_01031 9.2e-256 mmuP E amino acid
PNFHMCLD_01032 7.5e-169 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PNFHMCLD_01033 4.3e-291 tagE1 2.4.1.52 GT4 M Glycosyl transferases group 1
PNFHMCLD_01034 1.6e-121
PNFHMCLD_01035 4.1e-212 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PNFHMCLD_01036 5.5e-278 bmr3 EGP Major facilitator Superfamily
PNFHMCLD_01037 2.7e-139 N Cell shape-determining protein MreB
PNFHMCLD_01038 0.0 S Pfam Methyltransferase
PNFHMCLD_01039 3.3e-267 tagE2 2.4.1.52 GT4 M Glycosyl transferases group 1
PNFHMCLD_01040 2.2e-298 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
PNFHMCLD_01041 4.2e-29
PNFHMCLD_01042 2.2e-93 ytqB 2.1.1.176 J Putative rRNA methylase
PNFHMCLD_01043 1.4e-124 3.6.1.27 I Acid phosphatase homologues
PNFHMCLD_01044 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PNFHMCLD_01045 3e-301 ytgP S Polysaccharide biosynthesis protein
PNFHMCLD_01046 1.8e-136 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PNFHMCLD_01047 1.9e-150 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PNFHMCLD_01048 1.3e-273 pepV 3.5.1.18 E dipeptidase PepV
PNFHMCLD_01049 4.1e-84 uspA T Belongs to the universal stress protein A family
PNFHMCLD_01050 5.2e-201 ugpC 3.6.3.20 E Belongs to the ABC transporter superfamily
PNFHMCLD_01051 5.2e-173 ugpA U Binding-protein-dependent transport system inner membrane component
PNFHMCLD_01052 1.1e-150 ugpE G ABC transporter permease
PNFHMCLD_01053 1.3e-249 ugpB G Bacterial extracellular solute-binding protein
PNFHMCLD_01054 3.8e-125 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PNFHMCLD_01055 3.8e-119 dck 2.7.1.74 F deoxynucleoside kinase
PNFHMCLD_01056 5.5e-41 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PNFHMCLD_01057 3.9e-179 XK27_06930 V domain protein
PNFHMCLD_01059 1.2e-124 V Transport permease protein
PNFHMCLD_01060 2.3e-156 V ABC transporter
PNFHMCLD_01061 2.6e-175 K LytTr DNA-binding domain
PNFHMCLD_01063 7e-155 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PNFHMCLD_01064 3e-64 K helix_turn_helix, mercury resistance
PNFHMCLD_01065 3.5e-117 GM NAD(P)H-binding
PNFHMCLD_01066 9.3e-159 ypaH EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PNFHMCLD_01067 2.9e-148 S Sucrose-6F-phosphate phosphohydrolase
PNFHMCLD_01068 1.7e-108
PNFHMCLD_01069 2.2e-224 pltK 2.7.13.3 T GHKL domain
PNFHMCLD_01070 1.6e-137 pltR K LytTr DNA-binding domain
PNFHMCLD_01071 1.7e-54
PNFHMCLD_01072 2.5e-59
PNFHMCLD_01073 1.9e-113 S CAAX protease self-immunity
PNFHMCLD_01074 1.6e-85 ohrR K helix_turn_helix multiple antibiotic resistance protein
PNFHMCLD_01075 1e-90
PNFHMCLD_01076 2.5e-46
PNFHMCLD_01077 0.0 uvrA2 L ABC transporter
PNFHMCLD_01080 5.9e-52
PNFHMCLD_01081 3.5e-10
PNFHMCLD_01082 6.1e-180
PNFHMCLD_01083 1.9e-89 gtcA S Teichoic acid glycosylation protein
PNFHMCLD_01084 3.6e-58 S Protein of unknown function (DUF1516)
PNFHMCLD_01085 0.0 yitJ 1.5.1.20, 2.1.1.10, 2.1.1.13 E catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
PNFHMCLD_01086 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PNFHMCLD_01087 1.2e-307 S Protein conserved in bacteria
PNFHMCLD_01088 1.6e-229 sat 2.7.7.4 H the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms
PNFHMCLD_01089 7.4e-112 cysC 2.7.1.25, 2.7.7.4 F Catalyzes the synthesis of activated sulfate
PNFHMCLD_01090 8.5e-176 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain
PNFHMCLD_01091 1.4e-304 astA 2.8.2.22 M Arylsulfotransferase Ig-like domain
PNFHMCLD_01092 0.0 yfbS P Sodium:sulfate symporter transmembrane region
PNFHMCLD_01093 2.8e-244 dinF V MatE
PNFHMCLD_01094 1.9e-31
PNFHMCLD_01097 1.5e-77 elaA S Acetyltransferase (GNAT) domain
PNFHMCLD_01098 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PNFHMCLD_01099 1.4e-81
PNFHMCLD_01100 0.0 yhcA V MacB-like periplasmic core domain
PNFHMCLD_01101 7.6e-107
PNFHMCLD_01102 0.0 K PRD domain
PNFHMCLD_01103 2.4e-62 S Domain of unknown function (DUF3284)
PNFHMCLD_01104 1.4e-51 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
PNFHMCLD_01105 1.1e-47 pts15B 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PNFHMCLD_01106 6.1e-220 pts15C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PNFHMCLD_01107 3.3e-288 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PNFHMCLD_01108 9.5e-209 EGP Major facilitator Superfamily
PNFHMCLD_01109 1.5e-112 M ErfK YbiS YcfS YnhG
PNFHMCLD_01110 4e-34 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PNFHMCLD_01111 2.4e-283 ydfD K Alanine-glyoxylate amino-transferase
PNFHMCLD_01112 6.8e-102 argO S LysE type translocator
PNFHMCLD_01113 7.1e-214 arcT 2.6.1.1 E Aminotransferase
PNFHMCLD_01114 4.4e-77 argR K Regulates arginine biosynthesis genes
PNFHMCLD_01115 2.9e-12
PNFHMCLD_01116 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PNFHMCLD_01117 1e-54 yheA S Belongs to the UPF0342 family
PNFHMCLD_01118 5.7e-233 yhaO L Ser Thr phosphatase family protein
PNFHMCLD_01119 0.0 L AAA domain
PNFHMCLD_01120 2.5e-186 yhaM S Metal dependent phosphohydrolases with conserved 'HD' motif.
PNFHMCLD_01121 6.2e-213
PNFHMCLD_01122 3.1e-181 3.4.21.102 M Peptidase family S41
PNFHMCLD_01123 7.6e-177 K LysR substrate binding domain
PNFHMCLD_01124 2.1e-111 1.3.5.4 S NADPH-dependent FMN reductase
PNFHMCLD_01125 0.0 1.3.5.4 C FAD binding domain
PNFHMCLD_01126 8.4e-99
PNFHMCLD_01127 3.5e-76 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
PNFHMCLD_01128 6.1e-185 ykoT GT2 M Glycosyl transferase family 2
PNFHMCLD_01129 1.7e-15 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PNFHMCLD_01130 1.4e-287 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PNFHMCLD_01131 1e-41 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PNFHMCLD_01132 1.7e-19 S NUDIX domain
PNFHMCLD_01133 0.0 S membrane
PNFHMCLD_01134 7e-131 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PNFHMCLD_01135 1.8e-86 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
PNFHMCLD_01136 3.1e-223 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PNFHMCLD_01137 1.4e-81 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PNFHMCLD_01138 9.3e-106 GBS0088 S Nucleotidyltransferase
PNFHMCLD_01139 5.5e-106
PNFHMCLD_01140 7.9e-117 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
PNFHMCLD_01141 3.3e-112 K Bacterial regulatory proteins, tetR family
PNFHMCLD_01142 9.4e-242 npr 1.11.1.1 C NADH oxidase
PNFHMCLD_01143 0.0
PNFHMCLD_01144 3.5e-61
PNFHMCLD_01145 1.4e-192 S Fn3-like domain
PNFHMCLD_01146 2.6e-102 S WxL domain surface cell wall-binding
PNFHMCLD_01147 3.5e-78 S WxL domain surface cell wall-binding
PNFHMCLD_01148 7.8e-121 draG 3.2.2.24 O ADP-ribosylglycohydrolase
PNFHMCLD_01149 3.3e-129 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PNFHMCLD_01150 2e-42
PNFHMCLD_01151 9.9e-82 hit FG histidine triad
PNFHMCLD_01152 1.6e-134 ecsA V ABC transporter, ATP-binding protein
PNFHMCLD_01153 2.4e-223 ecsB U ABC transporter
PNFHMCLD_01154 3.2e-152 ytmP 2.7.1.89 M Choline/ethanolamine kinase
PNFHMCLD_01155 1.7e-120 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PNFHMCLD_01156 1.6e-54 ytzB S Peptidase propeptide and YPEB domain
PNFHMCLD_01157 7.4e-115 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PNFHMCLD_01158 0.0 sftA D Belongs to the FtsK SpoIIIE SftA family
PNFHMCLD_01159 1.1e-253 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PNFHMCLD_01160 1.3e-20 S Virus attachment protein p12 family
PNFHMCLD_01161 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
PNFHMCLD_01162 1.3e-34 feoA P FeoA domain
PNFHMCLD_01163 1.8e-142 sufC O FeS assembly ATPase SufC
PNFHMCLD_01164 2.6e-244 sufD O FeS assembly protein SufD
PNFHMCLD_01165 1.8e-234 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PNFHMCLD_01166 7.1e-83 nifU C SUF system FeS assembly protein, NifU family
PNFHMCLD_01167 1.4e-272 sufB O assembly protein SufB
PNFHMCLD_01168 5.5e-45 yitW S Iron-sulfur cluster assembly protein
PNFHMCLD_01169 3.1e-111 hipB K Helix-turn-helix
PNFHMCLD_01170 4.5e-121 ybhL S Belongs to the BI1 family
PNFHMCLD_01171 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PNFHMCLD_01172 1.5e-157 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PNFHMCLD_01173 1e-102 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PNFHMCLD_01174 4.6e-91 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PNFHMCLD_01175 1.1e-248 dnaB L replication initiation and membrane attachment
PNFHMCLD_01176 1.2e-171 dnaI L Primosomal protein DnaI
PNFHMCLD_01177 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PNFHMCLD_01178 1.8e-84 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PNFHMCLD_01179 1.9e-26 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PNFHMCLD_01180 7.3e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PNFHMCLD_01181 1.1e-55
PNFHMCLD_01182 5e-240 yrvN L AAA C-terminal domain
PNFHMCLD_01183 8e-196 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PNFHMCLD_01184 1e-62 hxlR K Transcriptional regulator, HxlR family
PNFHMCLD_01185 1.5e-135 racD 5.1.1.13 G Belongs to the aspartate glutamate racemases family
PNFHMCLD_01186 1e-248 pgaC GT2 M Glycosyl transferase
PNFHMCLD_01187 1.3e-79
PNFHMCLD_01188 1.4e-98 yqeG S HAD phosphatase, family IIIA
PNFHMCLD_01189 4.5e-216 yqeH S Ribosome biogenesis GTPase YqeH
PNFHMCLD_01190 1.1e-50 yhbY J RNA-binding protein
PNFHMCLD_01191 1.4e-118 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PNFHMCLD_01192 3.2e-115 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PNFHMCLD_01193 2.1e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PNFHMCLD_01194 2.2e-139 yqeM Q Methyltransferase
PNFHMCLD_01195 7.5e-219 ylbM S Belongs to the UPF0348 family
PNFHMCLD_01196 1.6e-97 yceD S Uncharacterized ACR, COG1399
PNFHMCLD_01197 7e-88 S Peptidase propeptide and YPEB domain
PNFHMCLD_01198 2e-169 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PNFHMCLD_01199 1e-273 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PNFHMCLD_01200 4.2e-245 rarA L recombination factor protein RarA
PNFHMCLD_01201 4.3e-121 K response regulator
PNFHMCLD_01202 8e-307 arlS 2.7.13.3 T Histidine kinase
PNFHMCLD_01203 2.9e-171 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PNFHMCLD_01204 0.0 sbcC L Putative exonuclease SbcCD, C subunit
PNFHMCLD_01205 1.7e-226 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PNFHMCLD_01206 9.3e-93 S SdpI/YhfL protein family
PNFHMCLD_01207 5.9e-150 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PNFHMCLD_01208 6.4e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PNFHMCLD_01209 7.9e-140 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PNFHMCLD_01210 1.3e-93 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
PNFHMCLD_01211 7.4e-64 yodB K Transcriptional regulator, HxlR family
PNFHMCLD_01212 4.9e-201 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PNFHMCLD_01213 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PNFHMCLD_01214 3.3e-185 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PNFHMCLD_01215 2.6e-112 udk 2.7.1.48 F Cytidine monophosphokinase
PNFHMCLD_01216 6.8e-81 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PNFHMCLD_01217 2.3e-96 liaI S membrane
PNFHMCLD_01218 4e-75 XK27_02470 K LytTr DNA-binding domain
PNFHMCLD_01219 1.5e-54 yneR S Belongs to the HesB IscA family
PNFHMCLD_01220 0.0 S membrane
PNFHMCLD_01221 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
PNFHMCLD_01222 1.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PNFHMCLD_01223 6.3e-102 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PNFHMCLD_01224 1.3e-114 gluP 3.4.21.105 S Peptidase, S54 family
PNFHMCLD_01225 1.4e-33 yqgQ S Bacterial protein of unknown function (DUF910)
PNFHMCLD_01226 5.7e-180 glk 2.7.1.2 G Glucokinase
PNFHMCLD_01227 6.4e-111 pepE 3.4.13.21 E Belongs to the peptidase S51 family
PNFHMCLD_01228 4.4e-68 yqhL P Rhodanese-like protein
PNFHMCLD_01229 6.9e-23 WQ51_02665 S Protein of unknown function (DUF3042)
PNFHMCLD_01230 5.8e-140 glpQ 3.1.4.46 C phosphodiesterase
PNFHMCLD_01231 6e-174 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PNFHMCLD_01232 4.6e-64 glnR K Transcriptional regulator
PNFHMCLD_01233 6.2e-265 glnA 6.3.1.2 E glutamine synthetase
PNFHMCLD_01234 2.5e-161
PNFHMCLD_01235 1.2e-180
PNFHMCLD_01236 2.4e-98 dut S Protein conserved in bacteria
PNFHMCLD_01237 5.7e-97 L PFAM Integrase catalytic region
PNFHMCLD_01238 9.5e-52 Z012_00440 L transposase activity
PNFHMCLD_01239 5.3e-56
PNFHMCLD_01240 1.7e-30
PNFHMCLD_01243 5.4e-19
PNFHMCLD_01244 1.8e-89 K Transcriptional regulator
PNFHMCLD_01245 7.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
PNFHMCLD_01246 3.2e-53 ysxB J Cysteine protease Prp
PNFHMCLD_01247 5.4e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PNFHMCLD_01248 5.9e-194 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PNFHMCLD_01249 2.2e-99 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PNFHMCLD_01250 3.5e-74 yqhY S Asp23 family, cell envelope-related function
PNFHMCLD_01251 5.2e-69 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PNFHMCLD_01252 2.2e-151 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PNFHMCLD_01253 9.3e-245 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PNFHMCLD_01254 4.3e-33 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PNFHMCLD_01255 5.5e-153 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PNFHMCLD_01256 4e-150 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PNFHMCLD_01257 2.2e-76 argR K Regulates arginine biosynthesis genes
PNFHMCLD_01258 4.4e-308 recN L May be involved in recombinational repair of damaged DNA
PNFHMCLD_01259 5.7e-222 opuCA 3.6.3.32 E ABC transporter, ATP-binding protein
PNFHMCLD_01260 1.2e-104 opuCB E ABC transporter permease
PNFHMCLD_01261 3.9e-173 opuCC M Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PNFHMCLD_01262 4.9e-106 opuCD P Binding-protein-dependent transport system inner membrane component
PNFHMCLD_01263 4.5e-55
PNFHMCLD_01264 3.3e-112 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
PNFHMCLD_01265 2.4e-30 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PNFHMCLD_01266 4e-218 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PNFHMCLD_01267 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PNFHMCLD_01268 1.8e-173 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PNFHMCLD_01269 3e-251 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PNFHMCLD_01270 1.7e-134 stp 3.1.3.16 T phosphatase
PNFHMCLD_01271 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
PNFHMCLD_01272 3.2e-164 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PNFHMCLD_01273 2.8e-117 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PNFHMCLD_01274 3.4e-123 thiN 2.7.6.2 H thiamine pyrophosphokinase
PNFHMCLD_01275 4.9e-27 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PNFHMCLD_01276 1.8e-57 asp S Asp23 family, cell envelope-related function
PNFHMCLD_01277 0.0 yloV S DAK2 domain fusion protein YloV
PNFHMCLD_01278 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PNFHMCLD_01279 2.3e-190 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PNFHMCLD_01280 1.7e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PNFHMCLD_01281 5.7e-129 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PNFHMCLD_01282 0.0 smc D Required for chromosome condensation and partitioning
PNFHMCLD_01283 1.9e-169 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PNFHMCLD_01284 2.6e-58 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PNFHMCLD_01285 1.1e-219 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PNFHMCLD_01286 2.9e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PNFHMCLD_01287 2.6e-39 ylqC S Belongs to the UPF0109 family
PNFHMCLD_01288 1.4e-95 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PNFHMCLD_01289 3.4e-140 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PNFHMCLD_01290 1.9e-59 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PNFHMCLD_01291 6.8e-53
PNFHMCLD_01292 0.0 pelX UW LPXTG-motif cell wall anchor domain protein
PNFHMCLD_01293 5.3e-86
PNFHMCLD_01294 2.3e-139 ecsA_2 V AAA domain, putative AbiEii toxin, Type IV TA system
PNFHMCLD_01295 5.7e-257 XK27_00765
PNFHMCLD_01297 2.4e-267 trpE 4.1.3.27 EH Anthranilate synthase component I, N terminal region
PNFHMCLD_01298 1.5e-104 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH Peptidase C26
PNFHMCLD_01299 2.2e-166 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PNFHMCLD_01300 2.4e-128 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
PNFHMCLD_01301 7.7e-109 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E Belongs to the TrpF family
PNFHMCLD_01302 3e-226 trpB 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PNFHMCLD_01303 3.9e-142 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PNFHMCLD_01304 2e-97 entB 3.5.1.19 Q Isochorismatase family
PNFHMCLD_01305 1.3e-176 1.6.5.5 C Zinc-binding dehydrogenase
PNFHMCLD_01306 1.2e-67 ybbJ K Acetyltransferase (GNAT) family
PNFHMCLD_01307 1.5e-217 E glutamate:sodium symporter activity
PNFHMCLD_01308 1.3e-215 3.5.1.47 E Peptidase family M20/M25/M40
PNFHMCLD_01309 5.1e-198 adhB 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PNFHMCLD_01310 2.1e-58 S Protein of unknown function (DUF1648)
PNFHMCLD_01312 3e-145 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PNFHMCLD_01313 1.1e-178 yneE K Transcriptional regulator
PNFHMCLD_01314 2.3e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PNFHMCLD_01315 2.9e-179 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PNFHMCLD_01316 3.8e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PNFHMCLD_01317 1.3e-168 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
PNFHMCLD_01318 2.1e-126 IQ reductase
PNFHMCLD_01319 9.5e-228 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PNFHMCLD_01320 2.3e-73 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PNFHMCLD_01321 6.1e-70 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
PNFHMCLD_01322 1.2e-260 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
PNFHMCLD_01323 1.6e-157 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PNFHMCLD_01324 3e-139 accA 2.1.3.15, 6.4.1.2 I alpha subunit
PNFHMCLD_01325 1.5e-135 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
PNFHMCLD_01326 1.4e-98 2.7.8.7 H Belongs to the P-Pant transferase superfamily
PNFHMCLD_01327 2.2e-123 S Protein of unknown function (DUF554)
PNFHMCLD_01328 1.6e-160 K LysR substrate binding domain
PNFHMCLD_01329 1.7e-87 ykhA 3.1.2.20 I Thioesterase superfamily
PNFHMCLD_01330 1.9e-192 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PNFHMCLD_01331 2.3e-93 K transcriptional regulator
PNFHMCLD_01332 1.4e-301 norB EGP Major Facilitator
PNFHMCLD_01333 1.5e-139 f42a O Band 7 protein
PNFHMCLD_01334 8.5e-54
PNFHMCLD_01335 1.3e-28
PNFHMCLD_01336 1.8e-207 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PNFHMCLD_01337 8e-33 L hmm pf00665
PNFHMCLD_01338 4.5e-114 1.14.99.53 AA10 S Lytic polysaccharide mono-oxygenase, cellulose-degrading
PNFHMCLD_01339 3e-44 ycnE 3.1.1.29 S Antibiotic biosynthesis monooxygenase
PNFHMCLD_01340 7.9e-41
PNFHMCLD_01341 4.3e-67 tspO T TspO/MBR family
PNFHMCLD_01342 1.8e-75 uspA T Belongs to the universal stress protein A family
PNFHMCLD_01343 1e-65 S Protein of unknown function (DUF805)
PNFHMCLD_01344 3.2e-164 yegS 2.7.1.107 I Diacylglycerol kinase catalytic domain
PNFHMCLD_01345 3.5e-36
PNFHMCLD_01346 3.1e-14
PNFHMCLD_01347 6.5e-41 S transglycosylase associated protein
PNFHMCLD_01348 4.8e-29 S CsbD-like
PNFHMCLD_01349 9.4e-40
PNFHMCLD_01350 4.3e-280 pipD E Dipeptidase
PNFHMCLD_01351 1.8e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PNFHMCLD_01352 2.7e-252 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PNFHMCLD_01353 1.4e-170 2.5.1.74 H UbiA prenyltransferase family
PNFHMCLD_01354 1.4e-136 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 U Ion channel
PNFHMCLD_01355 1.9e-49
PNFHMCLD_01356 2.4e-43
PNFHMCLD_01357 3.3e-258 gabT 2.6.1.19, 5.1.1.21 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PNFHMCLD_01358 1.4e-265 yfnA E Amino Acid
PNFHMCLD_01359 1.2e-149 yitU 3.1.3.104 S hydrolase
PNFHMCLD_01360 8e-268 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
PNFHMCLD_01361 1.5e-89 S Domain of unknown function (DUF4767)
PNFHMCLD_01362 2.5e-250 malT G Major Facilitator
PNFHMCLD_01363 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PNFHMCLD_01364 3e-195 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PNFHMCLD_01365 9.6e-197 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PNFHMCLD_01366 3.8e-204 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PNFHMCLD_01367 7.4e-175 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PNFHMCLD_01368 1.2e-169 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
PNFHMCLD_01369 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PNFHMCLD_01370 2.1e-72 ypmB S protein conserved in bacteria
PNFHMCLD_01371 1.1e-225 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
PNFHMCLD_01372 5.4e-258 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PNFHMCLD_01373 1.1e-127 dnaD L Replication initiation and membrane attachment
PNFHMCLD_01374 2e-186 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PNFHMCLD_01375 2e-99 metI P ABC transporter permease
PNFHMCLD_01376 2.1e-157 metQ_4 P Belongs to the nlpA lipoprotein family
PNFHMCLD_01377 4.4e-83 uspA T Universal stress protein family
PNFHMCLD_01378 1.2e-302 ftpA P Binding-protein-dependent transport system inner membrane component
PNFHMCLD_01379 4.9e-182 ftpB P Bacterial extracellular solute-binding protein
PNFHMCLD_01380 1.8e-178 phnT 3.6.3.30 P ATPases associated with a variety of cellular activities
PNFHMCLD_01381 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PNFHMCLD_01382 7.6e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PNFHMCLD_01383 8.3e-110 ypsA S Belongs to the UPF0398 family
PNFHMCLD_01384 3.2e-56 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PNFHMCLD_01386 1.8e-223 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PNFHMCLD_01387 1.2e-46 K helix_turn_helix, Arsenical Resistance Operon Repressor
PNFHMCLD_01388 6.1e-244 P Major Facilitator Superfamily
PNFHMCLD_01389 2.8e-145 yjfP S COG1073 Hydrolases of the alpha beta superfamily
PNFHMCLD_01390 1.7e-72 S SnoaL-like domain
PNFHMCLD_01391 2.8e-241 M Glycosyltransferase, group 2 family protein
PNFHMCLD_01392 5.1e-209 mccF V LD-carboxypeptidase
PNFHMCLD_01393 1.4e-78 K Acetyltransferase (GNAT) domain
PNFHMCLD_01394 2.6e-239 M hydrolase, family 25
PNFHMCLD_01395 2.3e-181 mccF 3.4.17.13 V LD-carboxypeptidase
PNFHMCLD_01396 1.3e-123
PNFHMCLD_01397 3.3e-121 3.6.3.35 P ATPases associated with a variety of cellular activities
PNFHMCLD_01398 2.3e-193
PNFHMCLD_01399 5.9e-146 S hydrolase activity, acting on ester bonds
PNFHMCLD_01400 9.5e-211 yurR 1.4.5.1 E FAD dependent oxidoreductase
PNFHMCLD_01401 2.2e-66 rnhA 3.1.26.4 L Ribonuclease HI
PNFHMCLD_01402 2.2e-61 esbA S Family of unknown function (DUF5322)
PNFHMCLD_01403 2.3e-293 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PNFHMCLD_01404 4.4e-74 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PNFHMCLD_01405 2e-174 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PNFHMCLD_01406 9.7e-89 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PNFHMCLD_01407 8.1e-207 carA 6.3.5.5 F Belongs to the CarA family
PNFHMCLD_01408 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PNFHMCLD_01409 6.4e-113 pgm5 G Phosphoglycerate mutase family
PNFHMCLD_01410 3.1e-71 frataxin S Domain of unknown function (DU1801)
PNFHMCLD_01413 1.7e-130 cat 2.3.1.28 V Chloramphenicol acetyltransferase
PNFHMCLD_01414 1.2e-69 S LuxR family transcriptional regulator
PNFHMCLD_01415 2.9e-136 S Uncharacterized protein conserved in bacteria (DUF2087)
PNFHMCLD_01416 3e-92 3.6.1.55 F NUDIX domain
PNFHMCLD_01417 2.4e-164 V ABC transporter, ATP-binding protein
PNFHMCLD_01418 9.3e-133 S ABC-2 family transporter protein
PNFHMCLD_01419 0.0 FbpA K Fibronectin-binding protein
PNFHMCLD_01420 1.9e-66 K Transcriptional regulator
PNFHMCLD_01421 1e-159 degV S EDD domain protein, DegV family
PNFHMCLD_01422 8.3e-78 yjcF 3.5.4.33, 4.4.1.8 K protein acetylation
PNFHMCLD_01423 1.3e-131 S Protein of unknown function (DUF975)
PNFHMCLD_01424 1.6e-09
PNFHMCLD_01425 1.4e-49
PNFHMCLD_01426 3.3e-149 2.7.7.12 C Domain of unknown function (DUF4931)
PNFHMCLD_01427 1.6e-211 pmrB EGP Major facilitator Superfamily
PNFHMCLD_01428 4.6e-12
PNFHMCLD_01429 6.2e-51 XK27_08430 S Staphylococcal protein of unknown function (DUF960)
PNFHMCLD_01430 4.6e-129 yejC S Protein of unknown function (DUF1003)
PNFHMCLD_01431 3.7e-130 XK27_00890 S Domain of unknown function (DUF368)
PNFHMCLD_01432 2.4e-245 cycA E Amino acid permease
PNFHMCLD_01433 3.5e-123
PNFHMCLD_01434 4.1e-59
PNFHMCLD_01435 1.1e-279 lldP C L-lactate permease
PNFHMCLD_01436 1.3e-225
PNFHMCLD_01437 3.3e-118 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the transfer of the cytidylyl group of CTP to D-ribitol 5-phosphate
PNFHMCLD_01438 9.7e-194 tarJ 1.1.1.137, 1.1.1.303, 1.1.1.4, 1.1.1.405 E Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate
PNFHMCLD_01439 6.8e-217 tarK 2.7.8.14, 2.7.8.47 H CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PNFHMCLD_01440 0.0 tarL 2.7.8.14, 2.7.8.47 H CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PNFHMCLD_01441 1.6e-94 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
PNFHMCLD_01442 7.8e-76 mgrA K helix_turn_helix multiple antibiotic resistance protein
PNFHMCLD_01443 9.3e-253 gshR1 1.8.1.7 C Glutathione reductase
PNFHMCLD_01444 1.8e-66
PNFHMCLD_01445 6.3e-246 M Glycosyl transferase family group 2
PNFHMCLD_01446 2.2e-274 GT89 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PNFHMCLD_01447 1.2e-157 xerD L Phage integrase, N-terminal SAM-like domain
PNFHMCLD_01448 4.2e-32 S YozE SAM-like fold
PNFHMCLD_01449 1e-95 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PNFHMCLD_01450 4e-80 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PNFHMCLD_01451 2.9e-168 ppaC 3.6.1.1 C inorganic pyrophosphatase
PNFHMCLD_01452 1.2e-177 K Transcriptional regulator
PNFHMCLD_01453 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PNFHMCLD_01454 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PNFHMCLD_01455 5.2e-105 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PNFHMCLD_01456 3.8e-170 lacX 5.1.3.3 G Aldose 1-epimerase
PNFHMCLD_01457 8.6e-257 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PNFHMCLD_01458 6.7e-93 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PNFHMCLD_01459 1.5e-177 xerC D Belongs to the 'phage' integrase family. XerC subfamily
PNFHMCLD_01460 6.6e-251 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PNFHMCLD_01461 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PNFHMCLD_01462 3.3e-158 dprA LU DNA protecting protein DprA
PNFHMCLD_01463 8.2e-137 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PNFHMCLD_01464 4.8e-162 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PNFHMCLD_01466 6.8e-228 XK27_05470 E Methionine synthase
PNFHMCLD_01467 3.1e-170 cpsY K Transcriptional regulator, LysR family
PNFHMCLD_01468 2.3e-173 L restriction endonuclease
PNFHMCLD_01469 4.2e-124 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
PNFHMCLD_01470 1.5e-197 XK27_00915 C Luciferase-like monooxygenase
PNFHMCLD_01471 7.3e-251 emrY EGP Major facilitator Superfamily
PNFHMCLD_01472 4.6e-261 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
PNFHMCLD_01473 3.4e-35 yozE S Belongs to the UPF0346 family
PNFHMCLD_01474 3.1e-113 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
PNFHMCLD_01475 2.1e-150 ypmR E GDSL-like Lipase/Acylhydrolase
PNFHMCLD_01476 5.1e-148 DegV S EDD domain protein, DegV family
PNFHMCLD_01477 5.1e-92 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PNFHMCLD_01478 1e-189 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PNFHMCLD_01479 0.0 yfmR S ABC transporter, ATP-binding protein
PNFHMCLD_01480 9.6e-85
PNFHMCLD_01481 2.1e-227 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PNFHMCLD_01482 5.4e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PNFHMCLD_01483 3.3e-149 3.1.3.102, 3.1.3.104 S hydrolase
PNFHMCLD_01484 2.1e-206 S Tetratricopeptide repeat protein
PNFHMCLD_01485 1.1e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PNFHMCLD_01486 1e-248 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PNFHMCLD_01487 1.8e-213 rpsA 1.17.7.4 J Ribosomal protein S1
PNFHMCLD_01488 3.8e-117 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PNFHMCLD_01489 2e-19 M Lysin motif
PNFHMCLD_01490 6.2e-271 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
PNFHMCLD_01491 3.6e-196 ypbB 5.1.3.1 S Helix-turn-helix domain
PNFHMCLD_01492 1.1e-96 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PNFHMCLD_01493 1.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PNFHMCLD_01494 7.9e-103 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PNFHMCLD_01495 5.7e-130 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PNFHMCLD_01496 4.8e-69 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PNFHMCLD_01497 1.1e-164 xerD D recombinase XerD
PNFHMCLD_01498 1.1e-169 cvfB S S1 domain
PNFHMCLD_01499 1.5e-74 yeaL S Protein of unknown function (DUF441)
PNFHMCLD_01500 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PNFHMCLD_01501 1.5e-180 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PNFHMCLD_01502 0.0 dnaE 2.7.7.7 L DNA polymerase
PNFHMCLD_01503 5.6e-29 S Protein of unknown function (DUF2929)
PNFHMCLD_01505 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PNFHMCLD_01506 1.5e-233 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PNFHMCLD_01507 7.2e-197 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PNFHMCLD_01508 1e-125 trmK 2.1.1.217 S SAM-dependent methyltransferase
PNFHMCLD_01509 6.9e-223 M O-Antigen ligase
PNFHMCLD_01510 1.6e-119 drrB U ABC-2 type transporter
PNFHMCLD_01511 1.2e-166 drrA V ABC transporter
PNFHMCLD_01512 3.1e-84 K helix_turn_helix multiple antibiotic resistance protein
PNFHMCLD_01513 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PNFHMCLD_01514 7.8e-61 P Rhodanese Homology Domain
PNFHMCLD_01515 8.1e-91 yetL K helix_turn_helix multiple antibiotic resistance protein
PNFHMCLD_01516 1.7e-207
PNFHMCLD_01517 1.5e-216 I transferase activity, transferring acyl groups other than amino-acyl groups
PNFHMCLD_01518 2.6e-180 C Zinc-binding dehydrogenase
PNFHMCLD_01519 0.0 3.6.3.6 P Cation transporter/ATPase, N-terminus
PNFHMCLD_01520 2.6e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PNFHMCLD_01521 3.8e-241 EGP Major facilitator Superfamily
PNFHMCLD_01522 4.3e-77 K Transcriptional regulator
PNFHMCLD_01523 9.2e-209 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PNFHMCLD_01524 5.3e-270 naoX P Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PNFHMCLD_01525 1.2e-29 naoX P Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PNFHMCLD_01526 8e-137 K DeoR C terminal sensor domain
PNFHMCLD_01527 1.2e-106 yjhB 3.6.1.13, 3.6.1.55 F NUDIX domain
PNFHMCLD_01528 5e-69 yneH 1.20.4.1 P ArsC family
PNFHMCLD_01529 4.1e-68 S Protein of unknown function (DUF1722)
PNFHMCLD_01530 2e-112 GM epimerase
PNFHMCLD_01531 0.0 CP_1020 S Zinc finger, swim domain protein
PNFHMCLD_01532 9.2e-82 K Bacterial regulatory proteins, tetR family
PNFHMCLD_01533 4.7e-214 S membrane
PNFHMCLD_01534 1.2e-14 K Bacterial regulatory proteins, tetR family
PNFHMCLD_01535 3.4e-72 S Alpha/beta hydrolase of unknown function (DUF915)
PNFHMCLD_01536 3.6e-28 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PNFHMCLD_01537 1.2e-112 ppaX_1 3.1.3.18, 3.6.1.1 S haloacid dehalogenase-like hydrolase
PNFHMCLD_01538 1.5e-80 maa 2.3.1.18, 2.3.1.79 S Maltose O-acetyltransferase
PNFHMCLD_01539 1.3e-128 K Helix-turn-helix domain, rpiR family
PNFHMCLD_01540 8.5e-159 S Alpha beta hydrolase
PNFHMCLD_01541 9.9e-112 GM NmrA-like family
PNFHMCLD_01542 4.9e-78 S Uncharacterized protein conserved in bacteria (DUF2255)
PNFHMCLD_01543 1.9e-161 K Transcriptional regulator
PNFHMCLD_01544 1.9e-172 C nadph quinone reductase
PNFHMCLD_01545 6.3e-14 S Alpha beta hydrolase
PNFHMCLD_01546 2.1e-271 nox C Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PNFHMCLD_01547 4e-102 desR K helix_turn_helix, Lux Regulon
PNFHMCLD_01548 2.8e-207 desK 2.7.13.3 T Histidine kinase
PNFHMCLD_01549 3.1e-136 yvfS V ABC-2 type transporter
PNFHMCLD_01550 5.2e-159 yvfR V ABC transporter
PNFHMCLD_01552 6e-82 K Acetyltransferase (GNAT) domain
PNFHMCLD_01553 2.4e-72 K MarR family
PNFHMCLD_01554 3.8e-114 S Psort location CytoplasmicMembrane, score
PNFHMCLD_01555 2.6e-12 yjdF S Protein of unknown function (DUF2992)
PNFHMCLD_01556 5.6e-161 V ABC transporter, ATP-binding protein
PNFHMCLD_01557 5.2e-128 S ABC-2 family transporter protein
PNFHMCLD_01558 2.8e-160
PNFHMCLD_01559 2.3e-201
PNFHMCLD_01560 7.5e-166 ytrB V ABC transporter, ATP-binding protein
PNFHMCLD_01561 9.5e-65 K helix_turn_helix gluconate operon transcriptional repressor
PNFHMCLD_01562 4.6e-197 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PNFHMCLD_01563 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PNFHMCLD_01564 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PNFHMCLD_01565 6.8e-175 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PNFHMCLD_01566 3.1e-147 recO L Involved in DNA repair and RecF pathway recombination
PNFHMCLD_01567 1.5e-169 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PNFHMCLD_01568 4.5e-73 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
PNFHMCLD_01569 1.9e-83 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PNFHMCLD_01570 3.4e-180 phoH T phosphate starvation-inducible protein PhoH
PNFHMCLD_01571 2.6e-71 yqeY S YqeY-like protein
PNFHMCLD_01572 9.7e-23 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PNFHMCLD_01573 2.1e-151 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PNFHMCLD_01574 6.5e-108 C Enoyl-(Acyl carrier protein) reductase
PNFHMCLD_01575 1.9e-169 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PNFHMCLD_01576 6.6e-223 tagB 2.7.8.14, 2.7.8.44, 2.7.8.47 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PNFHMCLD_01577 1.7e-159 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PNFHMCLD_01578 3.2e-100 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PNFHMCLD_01579 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PNFHMCLD_01580 2.2e-243 hisS 6.1.1.21 J histidyl-tRNA synthetase
PNFHMCLD_01581 4.3e-155 lytH 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
PNFHMCLD_01582 1.2e-162 yniA G Fructosamine kinase
PNFHMCLD_01583 6.5e-116 3.1.3.18 J HAD-hyrolase-like
PNFHMCLD_01584 8.5e-78 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PNFHMCLD_01585 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PNFHMCLD_01586 1.3e-57
PNFHMCLD_01587 2.9e-134 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PNFHMCLD_01588 4.5e-177 prmA J Ribosomal protein L11 methyltransferase
PNFHMCLD_01589 4e-113 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PNFHMCLD_01590 1.4e-49
PNFHMCLD_01591 5.4e-49
PNFHMCLD_01594 5.2e-127 3.6.4.12 L Belongs to the 'phage' integrase family
PNFHMCLD_01595 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PNFHMCLD_01596 6.1e-246 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PNFHMCLD_01597 2.4e-34 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PNFHMCLD_01598 8.7e-234 dltB M MBOAT, membrane-bound O-acyltransferase family
PNFHMCLD_01599 7e-297 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PNFHMCLD_01600 8.8e-19 dltX S D-Ala-teichoic acid biosynthesis protein
PNFHMCLD_01601 4.4e-198 pbpX2 V Beta-lactamase
PNFHMCLD_01602 1.2e-184 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PNFHMCLD_01603 0.0 dnaK O Heat shock 70 kDa protein
PNFHMCLD_01604 1.5e-80 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PNFHMCLD_01605 2.4e-195 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PNFHMCLD_01606 7.3e-132 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
PNFHMCLD_01607 2.7e-188 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PNFHMCLD_01608 1.2e-171 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PNFHMCLD_01609 2e-86 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PNFHMCLD_01610 6.5e-196 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
PNFHMCLD_01611 4.6e-233 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PNFHMCLD_01612 8.5e-93
PNFHMCLD_01613 1e-215 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PNFHMCLD_01614 6.7e-265 ydiN 5.4.99.5 G Major Facilitator
PNFHMCLD_01615 4.6e-50 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PNFHMCLD_01616 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PNFHMCLD_01617 1.1e-47 ylxQ J ribosomal protein
PNFHMCLD_01618 9.5e-49 ylxR K Protein of unknown function (DUF448)
PNFHMCLD_01619 5.7e-217 nusA K Participates in both transcription termination and antitermination
PNFHMCLD_01620 4.2e-83 rimP J Required for maturation of 30S ribosomal subunits
PNFHMCLD_01621 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PNFHMCLD_01622 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PNFHMCLD_01623 9.5e-231 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PNFHMCLD_01624 8.4e-137 cdsA 2.7.7.41 I Belongs to the CDS family
PNFHMCLD_01625 1.8e-147 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PNFHMCLD_01626 2.5e-82 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PNFHMCLD_01627 2.2e-128 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PNFHMCLD_01628 1e-151 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PNFHMCLD_01629 6.1e-143 rpsB J Belongs to the universal ribosomal protein uS2 family
PNFHMCLD_01630 4.7e-134 S Haloacid dehalogenase-like hydrolase
PNFHMCLD_01631 2.3e-187 ldhA 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PNFHMCLD_01632 7e-39 yazA L GIY-YIG catalytic domain protein
PNFHMCLD_01633 2.1e-132 yabB 2.1.1.223 L Methyltransferase small domain
PNFHMCLD_01634 6.4e-119 plsC 2.3.1.51 I Acyltransferase
PNFHMCLD_01635 4.3e-33 yneF S Uncharacterised protein family (UPF0154)
PNFHMCLD_01636 2.9e-36 ynzC S UPF0291 protein
PNFHMCLD_01637 5.6e-115 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PNFHMCLD_01638 3.7e-87
PNFHMCLD_01639 1.8e-215 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PNFHMCLD_01640 4.6e-75
PNFHMCLD_01641 3e-66
PNFHMCLD_01642 1.5e-177 csbB 2.4.1.83 GT2 M Glycosyltransferase like family 2
PNFHMCLD_01643 9.2e-101 L Helix-turn-helix domain
PNFHMCLD_01644 6.2e-221 lytR5 K Cell envelope-related transcriptional attenuator domain
PNFHMCLD_01645 7.9e-143 P ATPases associated with a variety of cellular activities
PNFHMCLD_01646 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
PNFHMCLD_01647 1.4e-228 rodA D Cell cycle protein
PNFHMCLD_01649 1.6e-31
PNFHMCLD_01650 1.1e-138 Q Methyltransferase
PNFHMCLD_01651 1.6e-37 ybjQ S Belongs to the UPF0145 family
PNFHMCLD_01652 5.1e-210 EGP Major facilitator Superfamily
PNFHMCLD_01653 1.5e-98 K Helix-turn-helix domain
PNFHMCLD_01654 2.9e-93 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PNFHMCLD_01655 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PNFHMCLD_01656 2e-50 yrvD S Lipopolysaccharide assembly protein A domain
PNFHMCLD_01657 7.4e-141 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PNFHMCLD_01658 1.1e-178 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PNFHMCLD_01659 3.2e-46
PNFHMCLD_01660 2.4e-245 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PNFHMCLD_01661 1.5e-135 fruR K DeoR C terminal sensor domain
PNFHMCLD_01662 2.3e-170 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PNFHMCLD_01663 6.7e-292 fruA 2.7.1.194, 2.7.1.200, 2.7.1.202 GT Phosphotransferase System
PNFHMCLD_01664 3.8e-251 cpdA S Calcineurin-like phosphoesterase
PNFHMCLD_01665 4.5e-261 cps4J S Polysaccharide biosynthesis protein
PNFHMCLD_01666 2.3e-176 cps4I M Glycosyltransferase like family 2
PNFHMCLD_01667 1.3e-232
PNFHMCLD_01668 2.9e-190 cps4G M Glycosyltransferase Family 4
PNFHMCLD_01669 5.6e-175 cps4F 2.4.1.21, 2.4.1.306 GT4,GT5 M Glycosyl transferases group 1
PNFHMCLD_01670 1.8e-127 tuaA M Bacterial sugar transferase
PNFHMCLD_01671 9.6e-180 cps4D 5.1.3.2 M RmlD substrate binding domain
PNFHMCLD_01672 3.5e-146 ywqE 3.1.3.48 GM PHP domain protein
PNFHMCLD_01673 2.8e-123 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PNFHMCLD_01674 3.4e-26 epsB M biosynthesis protein
PNFHMCLD_01675 3.2e-90 epsB M biosynthesis protein
PNFHMCLD_01676 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PNFHMCLD_01677 1.3e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PNFHMCLD_01678 7.8e-269 glnPH2 P ABC transporter permease
PNFHMCLD_01679 4.3e-22
PNFHMCLD_01680 2.9e-72 S Iron-sulphur cluster biosynthesis
PNFHMCLD_01681 2.2e-49 MA20_27270 S mazG nucleotide pyrophosphohydrolase
PNFHMCLD_01682 5.1e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
PNFHMCLD_01683 3.3e-236 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PNFHMCLD_01684 1.4e-213 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PNFHMCLD_01685 6.1e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PNFHMCLD_01686 1e-157 S Tetratricopeptide repeat
PNFHMCLD_01687 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PNFHMCLD_01688 6.2e-157 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PNFHMCLD_01689 2e-190 mdtG EGP Major Facilitator Superfamily
PNFHMCLD_01690 6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PNFHMCLD_01691 1.5e-34 rpsT J Binds directly to 16S ribosomal RNA
PNFHMCLD_01692 7e-187 holA 2.7.7.7 L DNA polymerase III delta subunit
PNFHMCLD_01693 0.0 comEC S Competence protein ComEC
PNFHMCLD_01694 6.4e-79 comEB 3.5.4.12 F ComE operon protein 2
PNFHMCLD_01695 6.8e-125 comEA L Competence protein ComEA
PNFHMCLD_01696 1.4e-195 ylbL T Belongs to the peptidase S16 family
PNFHMCLD_01697 1.5e-83 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PNFHMCLD_01698 2.2e-102 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PNFHMCLD_01699 1.5e-49 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
PNFHMCLD_01700 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PNFHMCLD_01701 1.6e-205 ftsW D Belongs to the SEDS family
PNFHMCLD_01702 4.3e-186
PNFHMCLD_01703 2e-87
PNFHMCLD_01704 1.5e-258 ica2 GT2 M Glycosyl transferase family group 2
PNFHMCLD_01705 1.2e-103
PNFHMCLD_01706 2.7e-196
PNFHMCLD_01707 0.0 typA T GTP-binding protein TypA
PNFHMCLD_01708 3.1e-136 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
PNFHMCLD_01709 3.3e-46 yktA S Belongs to the UPF0223 family
PNFHMCLD_01710 4.7e-163 1.1.1.27 C L-malate dehydrogenase activity
PNFHMCLD_01711 1.2e-266 lpdA 1.8.1.4 C Dehydrogenase
PNFHMCLD_01712 1.7e-203 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PNFHMCLD_01713 8.4e-179 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
PNFHMCLD_01714 1.6e-210 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
PNFHMCLD_01715 3.1e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PNFHMCLD_01716 1.6e-85
PNFHMCLD_01717 3.1e-33 ykzG S Belongs to the UPF0356 family
PNFHMCLD_01718 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PNFHMCLD_01719 2.2e-187 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PNFHMCLD_01720 1.7e-28
PNFHMCLD_01721 4.5e-59 mltD CBM50 M NlpC P60 family protein
PNFHMCLD_01722 6.2e-66 mltD CBM50 M NlpC P60 family protein
PNFHMCLD_01723 4.4e-172 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PNFHMCLD_01724 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PNFHMCLD_01725 1.6e-120 S Repeat protein
PNFHMCLD_01726 5.5e-121 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
PNFHMCLD_01727 5.5e-267 N domain, Protein
PNFHMCLD_01728 4.9e-193 S Bacterial protein of unknown function (DUF916)
PNFHMCLD_01729 2.3e-120 N WxL domain surface cell wall-binding
PNFHMCLD_01730 2.6e-115 ktrA P domain protein
PNFHMCLD_01731 1.3e-241 ktrB P Potassium uptake protein
PNFHMCLD_01732 9e-225 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PNFHMCLD_01733 4.9e-57 XK27_04120 S Putative amino acid metabolism
PNFHMCLD_01734 1.4e-215 iscS 2.8.1.7 E Aminotransferase class V
PNFHMCLD_01735 1.8e-122 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PNFHMCLD_01736 4.6e-28
PNFHMCLD_01737 1.9e-95 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PNFHMCLD_01738 3.2e-189 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PNFHMCLD_01739 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PNFHMCLD_01740 1.2e-86 divIVA D DivIVA domain protein
PNFHMCLD_01741 7.6e-146 ylmH S S4 domain protein
PNFHMCLD_01742 1.2e-36 yggT S YGGT family
PNFHMCLD_01743 3.3e-71 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PNFHMCLD_01744 1.4e-229 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PNFHMCLD_01745 5.5e-245 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PNFHMCLD_01746 5.8e-163 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PNFHMCLD_01747 1.5e-197 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PNFHMCLD_01748 1.2e-260 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PNFHMCLD_01749 8.3e-179 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PNFHMCLD_01750 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PNFHMCLD_01751 7.5e-54 ftsL D Cell division protein FtsL
PNFHMCLD_01752 4.7e-174 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PNFHMCLD_01753 1.9e-77 mraZ K Belongs to the MraZ family
PNFHMCLD_01754 1.9e-62 S Protein of unknown function (DUF3397)
PNFHMCLD_01755 4.7e-174 corA P CorA-like Mg2+ transporter protein
PNFHMCLD_01756 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PNFHMCLD_01757 1.8e-95 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PNFHMCLD_01758 2.4e-113 ywnB S NAD(P)H-binding
PNFHMCLD_01759 4.8e-209 brnQ U Component of the transport system for branched-chain amino acids
PNFHMCLD_01761 1.1e-161 rrmA 2.1.1.187 H Methyltransferase
PNFHMCLD_01762 1.7e-41 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PNFHMCLD_01763 4.3e-206 XK27_05220 S AI-2E family transporter
PNFHMCLD_01764 3.9e-57 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PNFHMCLD_01765 1.3e-193 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PNFHMCLD_01766 1.1e-115 cutC P Participates in the control of copper homeostasis
PNFHMCLD_01767 2.6e-174 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
PNFHMCLD_01768 4.7e-151 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PNFHMCLD_01769 2.7e-120 yjbM 2.7.6.5 S RelA SpoT domain protein
PNFHMCLD_01770 3.6e-114 yjbH Q Thioredoxin
PNFHMCLD_01771 0.0 pepF E oligoendopeptidase F
PNFHMCLD_01772 3.5e-202 coiA 3.6.4.12 S Competence protein
PNFHMCLD_01773 2.2e-131 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PNFHMCLD_01774 2.7e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PNFHMCLD_01775 2.2e-139 yhfI S Metallo-beta-lactamase superfamily
PNFHMCLD_01776 1.3e-90 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
PNFHMCLD_01786 5.5e-08
PNFHMCLD_01797 1.5e-42 S COG NOG38524 non supervised orthologous group
PNFHMCLD_01798 3.5e-64
PNFHMCLD_01799 1.6e-75 yugI 5.3.1.9 J general stress protein
PNFHMCLD_01800 5.5e-109 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PNFHMCLD_01801 1.9e-118 dedA S SNARE-like domain protein
PNFHMCLD_01802 4.6e-117 S Protein of unknown function (DUF1461)
PNFHMCLD_01803 1.5e-146 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PNFHMCLD_01804 1.5e-80 yutD S Protein of unknown function (DUF1027)
PNFHMCLD_01805 1.3e-270 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PNFHMCLD_01806 4.4e-117 S Calcineurin-like phosphoesterase
PNFHMCLD_01807 8.1e-252 cycA E Amino acid permease
PNFHMCLD_01808 7e-220 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PNFHMCLD_01809 3.6e-186 ytxK 2.1.1.72 L N-6 DNA Methylase
PNFHMCLD_01811 4.5e-88 S Prokaryotic N-terminal methylation motif
PNFHMCLD_01812 8.6e-20
PNFHMCLD_01813 3.2e-83 gspG NU general secretion pathway protein
PNFHMCLD_01814 5.5e-43 comGC U competence protein ComGC
PNFHMCLD_01815 9.6e-189 comGB NU type II secretion system
PNFHMCLD_01816 6.2e-174 comGA NU Type II IV secretion system protein
PNFHMCLD_01817 4.8e-160 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PNFHMCLD_01818 8.3e-131 yebC K Transcriptional regulatory protein
PNFHMCLD_01819 1.6e-49 S DsrE/DsrF-like family
PNFHMCLD_01820 2.3e-164 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
PNFHMCLD_01821 1.9e-181 ccpA K catabolite control protein A
PNFHMCLD_01822 1.7e-215 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PNFHMCLD_01823 1.1e-80 K helix_turn_helix, mercury resistance
PNFHMCLD_01824 2.8e-56
PNFHMCLD_01825 1.9e-23 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PNFHMCLD_01826 2.6e-158 ykuT M mechanosensitive ion channel
PNFHMCLD_01827 1.7e-226 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PNFHMCLD_01828 2.6e-76 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PNFHMCLD_01829 6.5e-87 ykuL S (CBS) domain
PNFHMCLD_01830 9.5e-97 S Phosphoesterase
PNFHMCLD_01831 1e-110 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PNFHMCLD_01832 9e-150 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PNFHMCLD_01833 7.6e-126 yslB S Protein of unknown function (DUF2507)
PNFHMCLD_01834 3.3e-52 trxA O Belongs to the thioredoxin family
PNFHMCLD_01835 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PNFHMCLD_01836 2.7e-36 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PNFHMCLD_01837 1.6e-48 yrzB S Belongs to the UPF0473 family
PNFHMCLD_01838 7.3e-74 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PNFHMCLD_01839 2.4e-43 yrzL S Belongs to the UPF0297 family
PNFHMCLD_01840 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PNFHMCLD_01841 9.3e-245 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PNFHMCLD_01842 7e-178 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PNFHMCLD_01843 5.3e-217 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PNFHMCLD_01844 2.8e-29 yajC U Preprotein translocase
PNFHMCLD_01845 3.3e-227 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PNFHMCLD_01846 6.3e-201 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PNFHMCLD_01847 2.1e-188 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PNFHMCLD_01848 4.6e-106 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PNFHMCLD_01849 9.6e-89
PNFHMCLD_01850 0.0 S Bacterial membrane protein YfhO
PNFHMCLD_01851 3.1e-71
PNFHMCLD_01852 1.3e-309 L Transposase
PNFHMCLD_01853 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PNFHMCLD_01854 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PNFHMCLD_01855 2.7e-154 ymdB S YmdB-like protein
PNFHMCLD_01856 2.1e-216 rny S Endoribonuclease that initiates mRNA decay
PNFHMCLD_01857 5e-191 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PNFHMCLD_01858 2.5e-231 cinA 3.5.1.42 S Belongs to the CinA family
PNFHMCLD_01859 3.7e-97 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PNFHMCLD_01860 5.7e-110 ymfM S Helix-turn-helix domain
PNFHMCLD_01861 2.9e-251 ymfH S Peptidase M16
PNFHMCLD_01862 1.9e-231 ymfF S Peptidase M16 inactive domain protein
PNFHMCLD_01863 3.8e-254 lysC 2.7.2.4 E Belongs to the aspartokinase family
PNFHMCLD_01864 9.5e-155 aatB ET ABC transporter substrate-binding protein
PNFHMCLD_01865 2.5e-115 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PNFHMCLD_01866 4.6e-109 glnP P ABC transporter permease
PNFHMCLD_01867 1.2e-146 minD D Belongs to the ParA family
PNFHMCLD_01868 1.1e-116 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PNFHMCLD_01869 1.2e-88 mreD M rod shape-determining protein MreD
PNFHMCLD_01870 5.8e-144 mreC M Involved in formation and maintenance of cell shape
PNFHMCLD_01871 1.4e-160 mreB D cell shape determining protein MreB
PNFHMCLD_01872 1.3e-116 radC L DNA repair protein
PNFHMCLD_01873 1.8e-248 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PNFHMCLD_01874 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PNFHMCLD_01875 3e-89 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PNFHMCLD_01876 6.8e-234 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
PNFHMCLD_01877 1.9e-228 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PNFHMCLD_01878 8.3e-218 iscS2 2.8.1.7 E Aminotransferase class V
PNFHMCLD_01880 0.0 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PNFHMCLD_01881 5e-81 ytsP 1.8.4.14 T GAF domain-containing protein
PNFHMCLD_01882 3.1e-107 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PNFHMCLD_01883 5.2e-113 yktB S Belongs to the UPF0637 family
PNFHMCLD_01884 3.3e-80 yueI S Protein of unknown function (DUF1694)
PNFHMCLD_01885 7.7e-109 S Protein of unknown function (DUF1648)
PNFHMCLD_01886 8.6e-44 czrA K Helix-turn-helix domain
PNFHMCLD_01887 0.0 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
PNFHMCLD_01888 8e-238 rarA L recombination factor protein RarA
PNFHMCLD_01889 1.5e-38
PNFHMCLD_01890 6.2e-82 usp6 T universal stress protein
PNFHMCLD_01891 2.2e-202 bla2 3.5.2.6 V Beta-lactamase enzyme family
PNFHMCLD_01892 3.3e-161 2.3.1.19 K Helix-turn-helix XRE-family like proteins
PNFHMCLD_01893 7.1e-297 glpQ3 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
PNFHMCLD_01894 5.4e-214 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PNFHMCLD_01895 3.6e-188 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PNFHMCLD_01896 1.6e-177 S Protein of unknown function (DUF2785)
PNFHMCLD_01897 2.8e-168 hicD1 1.1.1.27 C Belongs to the LDH MDH superfamily
PNFHMCLD_01898 2.2e-148 metQ M Belongs to the nlpA lipoprotein family
PNFHMCLD_01899 1.4e-111 metI U ABC transporter permease
PNFHMCLD_01900 4e-187 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PNFHMCLD_01901 3.6e-48 gcsH2 E glycine cleavage
PNFHMCLD_01902 9.3e-220 rodA D Belongs to the SEDS family
PNFHMCLD_01903 1.2e-32 S Protein of unknown function (DUF2969)
PNFHMCLD_01904 2.3e-43 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PNFHMCLD_01905 2.7e-180 mbl D Cell shape determining protein MreB Mrl
PNFHMCLD_01906 2.1e-102 J Acetyltransferase (GNAT) domain
PNFHMCLD_01907 3.7e-246 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PNFHMCLD_01908 1.1e-50 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PNFHMCLD_01909 2.1e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PNFHMCLD_01910 2.3e-165 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PNFHMCLD_01911 2.7e-280 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PNFHMCLD_01912 1.8e-90 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PNFHMCLD_01913 6e-51 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PNFHMCLD_01914 4.3e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PNFHMCLD_01915 2.5e-127 atpB C it plays a direct role in the translocation of protons across the membrane
PNFHMCLD_01916 1e-232 pyrP F Permease
PNFHMCLD_01917 1.4e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PNFHMCLD_01918 2.9e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PNFHMCLD_01919 2e-191 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PNFHMCLD_01920 3.9e-159 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PNFHMCLD_01921 1.2e-197 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PNFHMCLD_01922 9.3e-109 tdk 2.7.1.21 F thymidine kinase
PNFHMCLD_01923 4.4e-263 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
PNFHMCLD_01924 6.5e-136 cobQ S glutamine amidotransferase
PNFHMCLD_01925 2.8e-195 manA 5.3.1.8 G mannose-6-phosphate isomerase
PNFHMCLD_01926 1.2e-191 ampC V Beta-lactamase
PNFHMCLD_01927 5.2e-29
PNFHMCLD_01928 2.3e-203 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PNFHMCLD_01929 1.9e-58
PNFHMCLD_01930 7e-125
PNFHMCLD_01931 0.0 yfiC V ABC transporter
PNFHMCLD_01932 9.6e-311 ycfI V ABC transporter, ATP-binding protein
PNFHMCLD_01933 3.3e-65 S Protein of unknown function (DUF1093)
PNFHMCLD_01934 1.3e-132 yxkH G Polysaccharide deacetylase
PNFHMCLD_01936 3.3e-61 V Abortive infection bacteriophage resistance protein
PNFHMCLD_01937 4.3e-146 L PFAM Integrase, catalytic core
PNFHMCLD_01938 6.9e-28 hol S Bacteriophage holin
PNFHMCLD_01939 1.7e-33 S Haemolysin XhlA
PNFHMCLD_01940 2.6e-203 lys M Glycosyl hydrolases family 25
PNFHMCLD_01941 4.4e-24
PNFHMCLD_01942 2.3e-48
PNFHMCLD_01944 1.8e-175 L Transposase and inactivated derivatives, IS30 family
PNFHMCLD_01946 8.2e-10 S by MetaGeneAnnotator
PNFHMCLD_01947 1.1e-46
PNFHMCLD_01950 3.9e-40 L Transposase
PNFHMCLD_01951 3.5e-68 L Transposase
PNFHMCLD_01952 2e-178 3.4.14.13 M Prophage endopeptidase tail
PNFHMCLD_01953 1.5e-158 S Phage tail protein
PNFHMCLD_01954 0.0 D NLP P60 protein
PNFHMCLD_01956 8.7e-84 S Phage tail assembly chaperone protein, TAC
PNFHMCLD_01957 1.9e-95
PNFHMCLD_01958 6.2e-65
PNFHMCLD_01959 4.7e-94
PNFHMCLD_01960 2.4e-49
PNFHMCLD_01961 1.5e-59 S Phage gp6-like head-tail connector protein
PNFHMCLD_01962 1.8e-187 gpG
PNFHMCLD_01963 3e-71 S Domain of unknown function (DUF4355)
PNFHMCLD_01964 2.5e-172 S Phage Mu protein F like protein
PNFHMCLD_01965 1.7e-293 S Phage portal protein, SPP1 Gp6-like
PNFHMCLD_01966 4.4e-252 S Phage terminase, large subunit
PNFHMCLD_01967 5.6e-68 ps333 L Terminase small subunit
PNFHMCLD_01969 1.2e-29
PNFHMCLD_01970 9.2e-23
PNFHMCLD_01972 1.6e-18 S KTSC domain
PNFHMCLD_01975 1.7e-81 arpU S Phage transcriptional regulator, ArpU family
PNFHMCLD_01978 4.1e-65 rusA 3.1.22.4 L Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
PNFHMCLD_01979 1.2e-62
PNFHMCLD_01980 2.4e-61 ps308 K AntA/AntB antirepressor
PNFHMCLD_01981 4.9e-50
PNFHMCLD_01982 6.9e-154 L Domain of unknown function (DUF4373)
PNFHMCLD_01983 1.1e-44 S Single-strand binding protein family
PNFHMCLD_01984 4.6e-64 S ERF superfamily
PNFHMCLD_01985 2.9e-82
PNFHMCLD_01987 2.2e-13 S Domain of unknown function (DUF1508)
PNFHMCLD_01988 1e-79
PNFHMCLD_01989 3.5e-54
PNFHMCLD_01992 1.7e-39 yvaO K Helix-turn-helix domain
PNFHMCLD_01993 1.1e-76 E IrrE N-terminal-like domain
PNFHMCLD_01994 3.2e-59
PNFHMCLD_02001 2.1e-37
PNFHMCLD_02003 9.6e-219 int L Belongs to the 'phage' integrase family
PNFHMCLD_02005 8.9e-30
PNFHMCLD_02008 9.3e-62
PNFHMCLD_02009 3.1e-38 S Phage gp6-like head-tail connector protein
PNFHMCLD_02010 3.4e-275 S Caudovirus prohead serine protease
PNFHMCLD_02011 9.4e-203 S Phage portal protein
PNFHMCLD_02013 0.0 terL S overlaps another CDS with the same product name
PNFHMCLD_02014 9.4e-83 terS L overlaps another CDS with the same product name
PNFHMCLD_02015 3.7e-69 L HNH endonuclease
PNFHMCLD_02016 3.4e-50 S head-tail joining protein
PNFHMCLD_02018 1e-72
PNFHMCLD_02019 1.5e-266 S Virulence-associated protein E
PNFHMCLD_02020 4.7e-143 L DNA replication protein
PNFHMCLD_02021 1.3e-11
PNFHMCLD_02022 5.9e-09
PNFHMCLD_02025 4.3e-146 L PFAM Integrase, catalytic core
PNFHMCLD_02026 3.2e-225 sip L Belongs to the 'phage' integrase family
PNFHMCLD_02027 2e-38
PNFHMCLD_02028 1.2e-42
PNFHMCLD_02029 7.3e-83 K MarR family
PNFHMCLD_02030 0.0 bztC D nuclear chromosome segregation
PNFHMCLD_02031 2.6e-154 M MucBP domain
PNFHMCLD_02032 2.7e-17 M MucBP domain
PNFHMCLD_02033 1.5e-14
PNFHMCLD_02034 4.7e-16
PNFHMCLD_02035 1.5e-14
PNFHMCLD_02036 4.2e-18
PNFHMCLD_02037 4.2e-18
PNFHMCLD_02038 5.5e-18
PNFHMCLD_02039 1.6e-16
PNFHMCLD_02040 0.0 msbA2 3.6.3.44 P ABC transporter transmembrane region
PNFHMCLD_02041 2.9e-274 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
PNFHMCLD_02042 0.0 macB3 V ABC transporter, ATP-binding protein
PNFHMCLD_02043 6.8e-24
PNFHMCLD_02044 1e-259 pgi 5.3.1.9 G Belongs to the GPI family
PNFHMCLD_02045 9.7e-155 glcU U sugar transport
PNFHMCLD_02046 2.1e-216 ywbD 2.1.1.191 J S-adenosylmethionine-dependent methyltransferase
PNFHMCLD_02047 3.8e-287 yclK 2.7.13.3 T Histidine kinase
PNFHMCLD_02048 1.6e-134 K response regulator
PNFHMCLD_02049 3e-243 XK27_08635 S UPF0210 protein
PNFHMCLD_02050 2.3e-38 gcvR T Belongs to the UPF0237 family
PNFHMCLD_02051 2.6e-169 EG EamA-like transporter family
PNFHMCLD_02053 6.5e-91 S ECF-type riboflavin transporter, S component
PNFHMCLD_02054 4.2e-47
PNFHMCLD_02055 9.8e-214 yceI EGP Major facilitator Superfamily
PNFHMCLD_02056 1.9e-138 3.6.1.13, 3.6.1.55 F NUDIX domain
PNFHMCLD_02057 1.1e-22
PNFHMCLD_02059 4.1e-161 S Alpha/beta hydrolase of unknown function (DUF915)
PNFHMCLD_02060 8.2e-173 ykfC 3.4.14.13 M NlpC/P60 family
PNFHMCLD_02061 3.3e-80 K AsnC family
PNFHMCLD_02062 2e-35
PNFHMCLD_02063 3.3e-33
PNFHMCLD_02064 6.6e-218 2.7.7.65 T diguanylate cyclase
PNFHMCLD_02065 7.8e-296 S ABC transporter, ATP-binding protein
PNFHMCLD_02066 2e-106 3.2.2.20 K acetyltransferase
PNFHMCLD_02067 2.2e-81 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PNFHMCLD_02068 6e-39
PNFHMCLD_02069 0.0 nagE 2.7.1.193, 2.7.1.199, 2.7.1.211 G phosphotransferase system, EIIB
PNFHMCLD_02070 9.6e-191 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PNFHMCLD_02071 5e-162 degV S Uncharacterised protein, DegV family COG1307
PNFHMCLD_02072 1.1e-229 hom1 1.1.1.3 E Homoserine dehydrogenase
PNFHMCLD_02073 2.6e-244 metY 2.5.1.49 E Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
PNFHMCLD_02074 1.3e-165 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PNFHMCLD_02075 3.1e-176 XK27_08835 S ABC transporter
PNFHMCLD_02076 8.7e-154 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PNFHMCLD_02077 6.4e-137 XK27_08845 S ABC transporter, ATP-binding protein
PNFHMCLD_02078 1.3e-257 npr 1.11.1.1 C NADH oxidase
PNFHMCLD_02079 4.2e-158 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
PNFHMCLD_02080 3.1e-136 terC P membrane
PNFHMCLD_02081 2.4e-85 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PNFHMCLD_02082 5.9e-202 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PNFHMCLD_02083 7.6e-52 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
PNFHMCLD_02084 3.8e-59 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PNFHMCLD_02085 4.9e-134 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PNFHMCLD_02086 2.2e-128 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PNFHMCLD_02087 2.6e-109 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PNFHMCLD_02088 7.9e-108 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
PNFHMCLD_02089 1.2e-233 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PNFHMCLD_02090 9.5e-118 hisG 2.4.2.17 F Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PNFHMCLD_02091 6.6e-215 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PNFHMCLD_02092 3.8e-164 hisK 3.1.3.15 E Histidinol phosphate phosphatase, HisJ
PNFHMCLD_02093 4.6e-216 ysaA V RDD family
PNFHMCLD_02094 7.6e-166 corA P CorA-like Mg2+ transporter protein
PNFHMCLD_02095 2.1e-55 S Domain of unknown function (DU1801)
PNFHMCLD_02096 5.9e-91 rmeB K transcriptional regulator, MerR family
PNFHMCLD_02097 1.4e-147 GM Belongs to the short-chain dehydrogenases reductases (SDR) family
PNFHMCLD_02098 8.6e-98 J glyoxalase III activity
PNFHMCLD_02099 8e-199 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PNFHMCLD_02100 5.9e-185 pva3 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PNFHMCLD_02101 3.7e-34
PNFHMCLD_02102 3.2e-112 S Protein of unknown function (DUF1211)
PNFHMCLD_02103 0.0 ydgH S MMPL family
PNFHMCLD_02104 8.9e-284 M domain protein
PNFHMCLD_02105 1.5e-74 yjcF S Acetyltransferase (GNAT) domain
PNFHMCLD_02106 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PNFHMCLD_02107 6.5e-310 glpQ 3.1.4.46 C phosphodiesterase
PNFHMCLD_02108 8.9e-184 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
PNFHMCLD_02109 4.4e-143 S Alpha/beta hydrolase of unknown function (DUF915)
PNFHMCLD_02110 4.7e-180 3.6.4.13 S domain, Protein
PNFHMCLD_02111 3.6e-168 S Polyphosphate kinase 2 (PPK2)
PNFHMCLD_02112 1.2e-97 drgA C Nitroreductase family
PNFHMCLD_02113 7e-178 iunH2 3.2.2.1 F nucleoside hydrolase
PNFHMCLD_02114 2.2e-146 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PNFHMCLD_02115 7.5e-122 S Sucrose-6F-phosphate phosphohydrolase
PNFHMCLD_02116 2.5e-156 ccpB 5.1.1.1 K lacI family
PNFHMCLD_02117 8.1e-117 K Helix-turn-helix domain, rpiR family
PNFHMCLD_02118 1.8e-176 S Oxidoreductase family, NAD-binding Rossmann fold
PNFHMCLD_02119 1.1e-197 yhhX 1.1.1.371 S Oxidoreductase family, C-terminal alpha/beta domain
PNFHMCLD_02120 0.0 yjcE P Sodium proton antiporter
PNFHMCLD_02121 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PNFHMCLD_02122 3.7e-107 pncA Q Isochorismatase family
PNFHMCLD_02123 2.7e-132
PNFHMCLD_02124 5.1e-125 skfE V ABC transporter
PNFHMCLD_02125 9.5e-65 yvoA_1 K Transcriptional regulator, GntR family
PNFHMCLD_02126 1.3e-44 S Enterocin A Immunity
PNFHMCLD_02127 2e-174 D Alpha beta
PNFHMCLD_02128 0.0 pepF2 E Oligopeptidase F
PNFHMCLD_02129 1.3e-72 K Transcriptional regulator
PNFHMCLD_02130 2.3e-164
PNFHMCLD_02131 1.3e-57
PNFHMCLD_02132 6.5e-47
PNFHMCLD_02133 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PNFHMCLD_02134 9.8e-28
PNFHMCLD_02135 8.4e-145 yjfP S Dienelactone hydrolase family
PNFHMCLD_02136 2.3e-56 dsbJ 2.7.1.180, 5.3.4.1 CO Thioredoxin
PNFHMCLD_02137 1.6e-205 metB 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PNFHMCLD_02138 5.2e-47
PNFHMCLD_02139 1.7e-45
PNFHMCLD_02140 5e-82 yybC S Protein of unknown function (DUF2798)
PNFHMCLD_02141 3.7e-73
PNFHMCLD_02142 4e-60
PNFHMCLD_02143 5.1e-195 lplA 6.3.1.20 H Lipoate-protein ligase
PNFHMCLD_02144 0.0 acm2 3.2.1.17 NU Bacterial SH3 domain
PNFHMCLD_02145 1.6e-79 uspA T universal stress protein
PNFHMCLD_02146 1.3e-154 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PNFHMCLD_02147 1.7e-48 K Cro/C1-type HTH DNA-binding domain
PNFHMCLD_02148 3.3e-21 S Protein of unknown function (DUF2929)
PNFHMCLD_02149 1e-223 lsgC M Glycosyl transferases group 1
PNFHMCLD_02150 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PNFHMCLD_02151 1.1e-163 S Putative esterase
PNFHMCLD_02152 2.4e-130 gntR2 K Transcriptional regulator
PNFHMCLD_02153 4.5e-91 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PNFHMCLD_02154 1.5e-138
PNFHMCLD_02155 3.1e-116 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PNFHMCLD_02156 5.5e-138 rrp8 K LytTr DNA-binding domain
PNFHMCLD_02157 4.2e-92 M1-874 K Domain of unknown function (DUF1836)
PNFHMCLD_02158 7.7e-61
PNFHMCLD_02159 4.1e-74 hspX O Belongs to the small heat shock protein (HSP20) family
PNFHMCLD_02160 4.4e-58
PNFHMCLD_02161 1.2e-239 yhdP S Transporter associated domain
PNFHMCLD_02162 4.9e-87 nrdI F Belongs to the NrdI family
PNFHMCLD_02163 9.3e-268 yjcE P Sodium proton antiporter
PNFHMCLD_02164 2.8e-213 yttB EGP Major facilitator Superfamily
PNFHMCLD_02165 5e-63 K helix_turn_helix, mercury resistance
PNFHMCLD_02166 1.8e-173 C Zinc-binding dehydrogenase
PNFHMCLD_02167 8.5e-57 S SdpI/YhfL protein family
PNFHMCLD_02168 6.3e-295 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PNFHMCLD_02169 3.6e-260 gabR K Bacterial regulatory proteins, gntR family
PNFHMCLD_02170 5e-218 patA 2.6.1.1 E Aminotransferase
PNFHMCLD_02171 7.8e-160 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PNFHMCLD_02172 3e-18
PNFHMCLD_02173 1.7e-126 S membrane transporter protein
PNFHMCLD_02174 1.9e-161 mleR K LysR family
PNFHMCLD_02175 5.6e-115 ylbE GM NAD(P)H-binding
PNFHMCLD_02176 8.2e-96 wecD K Acetyltransferase (GNAT) family
PNFHMCLD_02177 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PNFHMCLD_02178 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PNFHMCLD_02179 1.6e-169 ydcZ S Putative inner membrane exporter, YdcZ
PNFHMCLD_02180 2.4e-113 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PNFHMCLD_02181 1.8e-125 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PNFHMCLD_02182 3.3e-169 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PNFHMCLD_02183 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PNFHMCLD_02184 1.7e-212 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PNFHMCLD_02185 6.4e-243 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PNFHMCLD_02186 1.6e-171 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PNFHMCLD_02187 1.1e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PNFHMCLD_02188 5e-298 pucR QT Purine catabolism regulatory protein-like family
PNFHMCLD_02189 2.7e-236 pbuX F xanthine permease
PNFHMCLD_02190 2.4e-221 pbuG S Permease family
PNFHMCLD_02191 5.6e-161 GM NmrA-like family
PNFHMCLD_02192 6.5e-156 T EAL domain
PNFHMCLD_02193 6.4e-93
PNFHMCLD_02194 2.7e-252 pgaC GT2 M Glycosyl transferase
PNFHMCLD_02195 1e-122 2.1.1.14 E Methionine synthase
PNFHMCLD_02196 1.6e-214 purD 6.3.4.13 F Belongs to the GARS family
PNFHMCLD_02197 2.3e-287 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PNFHMCLD_02198 9.9e-103 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PNFHMCLD_02199 1.6e-188 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PNFHMCLD_02200 7.4e-280 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PNFHMCLD_02201 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PNFHMCLD_02202 2e-126 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PNFHMCLD_02203 3.6e-41 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PNFHMCLD_02204 2.9e-131 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PNFHMCLD_02205 8.7e-212 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PNFHMCLD_02206 1.7e-79 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PNFHMCLD_02207 3.9e-224 XK27_09615 1.3.5.4 S reductase
PNFHMCLD_02208 1.8e-110 XK27_09620 1.3.5.4 S NADPH-dependent FMN reductase
PNFHMCLD_02209 4.9e-190 lplA2 6.3.1.20 H Bacterial lipoate protein ligase C-terminus
PNFHMCLD_02210 1.2e-146 ptp3 3.1.3.48 T Tyrosine phosphatase family
PNFHMCLD_02211 1.9e-118 cah 4.2.1.1 P Eukaryotic-type carbonic anhydrase
PNFHMCLD_02212 8.3e-148 S Alpha/beta hydrolase of unknown function (DUF915)
PNFHMCLD_02213 5.8e-180 ansA 3.5.1.1 EJ Asparaginase
PNFHMCLD_02214 1.7e-139 cysA V ABC transporter, ATP-binding protein
PNFHMCLD_02215 0.0 V FtsX-like permease family
PNFHMCLD_02216 3e-41
PNFHMCLD_02217 7.9e-61 gntR1 K Transcriptional regulator, GntR family
PNFHMCLD_02218 6.9e-164 V ABC transporter, ATP-binding protein
PNFHMCLD_02219 5.1e-137
PNFHMCLD_02220 6.7e-81 uspA T universal stress protein
PNFHMCLD_02221 4e-34
PNFHMCLD_02222 5.5e-71 gtcA S Teichoic acid glycosylation protein
PNFHMCLD_02223 4.3e-88
PNFHMCLD_02224 5e-51
PNFHMCLD_02226 1.7e-234 malY 4.4.1.8 E Aminotransferase, class I
PNFHMCLD_02227 7.3e-86 2.7.7.1, 3.6.1.55 F belongs to the nudix hydrolase family
PNFHMCLD_02228 5.4e-118
PNFHMCLD_02229 1.5e-52
PNFHMCLD_02231 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PNFHMCLD_02232 1.1e-281 thrC 4.2.3.1 E Threonine synthase
PNFHMCLD_02233 4.5e-146 XK27_02985 S Sucrose-6F-phosphate phosphohydrolase
PNFHMCLD_02234 4.4e-11 mcbG S Pentapeptide repeats (8 copies)
PNFHMCLD_02235 1.7e-111 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PNFHMCLD_02236 7.5e-103 3.6.1.13 L Belongs to the Nudix hydrolase family
PNFHMCLD_02237 7.8e-69 FG Scavenger mRNA decapping enzyme C-term binding
PNFHMCLD_02238 7.5e-135 IQ Enoyl-(Acyl carrier protein) reductase
PNFHMCLD_02239 1.8e-36 XK27_01315 S Protein of unknown function (DUF2829)
PNFHMCLD_02240 1.9e-211 S Bacterial protein of unknown function (DUF871)
PNFHMCLD_02241 2.1e-232 S Sterol carrier protein domain
PNFHMCLD_02242 3.6e-88 niaR S 3H domain
PNFHMCLD_02243 6.6e-265 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PNFHMCLD_02244 2.8e-117 K Transcriptional regulator
PNFHMCLD_02245 3.2e-154 V ABC transporter
PNFHMCLD_02246 8.2e-134 V AAA domain, putative AbiEii toxin, Type IV TA system
PNFHMCLD_02247 2.4e-245 dsdA 4.3.1.18 E Belongs to the serine threonine dehydratase family. DsdA subfamily
PNFHMCLD_02248 1.8e-294 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PNFHMCLD_02249 3.3e-296 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PNFHMCLD_02250 1.8e-54 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
PNFHMCLD_02251 2.3e-48 pts20B 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PNFHMCLD_02252 8.9e-130 gntR K UTRA
PNFHMCLD_02253 6.8e-141 epsV 2.7.8.12 S glycosyl transferase family 2
PNFHMCLD_02254 6.5e-122 pgm7 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PNFHMCLD_02255 1.8e-81
PNFHMCLD_02256 9.8e-152 S hydrolase
PNFHMCLD_02257 2.3e-179 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PNFHMCLD_02258 1.4e-151 EG EamA-like transporter family
PNFHMCLD_02259 5.5e-175 pdxB 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PNFHMCLD_02260 3.5e-100 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
PNFHMCLD_02261 1.9e-231
PNFHMCLD_02262 1.1e-77 fld C Flavodoxin
PNFHMCLD_02263 0.0 M Bacterial Ig-like domain (group 3)
PNFHMCLD_02264 0.0 M Bacterial surface protein 26-residue PARCEL repeat (3 repeats)
PNFHMCLD_02265 2.7e-32
PNFHMCLD_02266 3.1e-128 aroD 1.1.1.25, 4.2.1.10 E Type I 3-dehydroquinase
PNFHMCLD_02267 6.4e-268 ycaM E amino acid
PNFHMCLD_02268 3e-78 K Winged helix DNA-binding domain
PNFHMCLD_02269 2.8e-165 S Oxidoreductase, aldo keto reductase family protein
PNFHMCLD_02270 1.1e-161 akr5f 1.1.1.346 S reductase
PNFHMCLD_02271 3.9e-162 K Transcriptional regulator
PNFHMCLD_02273 1.5e-42 S COG NOG38524 non supervised orthologous group
PNFHMCLD_02274 1.8e-84 hmpT S Pfam:DUF3816
PNFHMCLD_02275 1.5e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PNFHMCLD_02276 3.9e-111
PNFHMCLD_02277 2.4e-149 M Glycosyl hydrolases family 25
PNFHMCLD_02278 2e-143 yvpB S Peptidase_C39 like family
PNFHMCLD_02279 1.1e-92 yueI S Protein of unknown function (DUF1694)
PNFHMCLD_02280 1.6e-115 S Protein of unknown function (DUF554)
PNFHMCLD_02281 6.4e-148 KT helix_turn_helix, mercury resistance
PNFHMCLD_02282 1.7e-227 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PNFHMCLD_02283 6.6e-95 S Protein of unknown function (DUF1440)
PNFHMCLD_02284 2.2e-172 hrtB V ABC transporter permease
PNFHMCLD_02285 2.8e-120 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PNFHMCLD_02286 3.7e-91 2.7.7.65 T phosphorelay sensor kinase activity
PNFHMCLD_02287 2.7e-185 iunH 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PNFHMCLD_02288 8.1e-99 1.5.1.3 H RibD C-terminal domain
PNFHMCLD_02289 1.1e-185 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PNFHMCLD_02290 7.5e-118 S Membrane
PNFHMCLD_02291 1.2e-155 mleP3 S Membrane transport protein
PNFHMCLD_02292 8.5e-257 aspA 4.2.1.2, 4.3.1.1 E Fumarase C C-terminus
PNFHMCLD_02293 1.3e-189 ynfM EGP Major facilitator Superfamily
PNFHMCLD_02294 2.8e-125 hadL 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PNFHMCLD_02295 3.8e-260 lmrB EGP Major facilitator Superfamily
PNFHMCLD_02296 2e-75 S Domain of unknown function (DUF4811)
PNFHMCLD_02297 1.8e-101 rimL J Acetyltransferase (GNAT) domain
PNFHMCLD_02298 9.3e-173 S Conserved hypothetical protein 698
PNFHMCLD_02299 3.7e-151 rlrG K Transcriptional regulator
PNFHMCLD_02300 7.6e-296 tagE5 2.4.1.52 GT4 M Poly(Glycerol-phosphate) alpha-glucosyltransferase
PNFHMCLD_02301 2.6e-267 tagE6 2.4.1.52 GT4 M Glycosyl transferases group 1
PNFHMCLD_02303 5.6e-51 lytE M LysM domain
PNFHMCLD_02304 4.4e-91 ogt 2.1.1.63 L Methyltransferase
PNFHMCLD_02305 2e-166 natA S ABC transporter, ATP-binding protein
PNFHMCLD_02306 4.7e-211 natB CP ABC-2 family transporter protein
PNFHMCLD_02307 1.4e-128 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PNFHMCLD_02308 7.3e-55 yphJ 4.1.1.44 S Carboxymuconolactone decarboxylase family
PNFHMCLD_02309 3.2e-76 yphH S Cupin domain
PNFHMCLD_02310 9.8e-79 K transcriptional regulator, MerR family
PNFHMCLD_02311 1.7e-235 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PNFHMCLD_02312 0.0 ylbB V ABC transporter permease
PNFHMCLD_02313 2.2e-120 macB V ABC transporter, ATP-binding protein
PNFHMCLD_02315 8e-117 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PNFHMCLD_02316 2.9e-100 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PNFHMCLD_02317 8.4e-116 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PNFHMCLD_02319 3.8e-84
PNFHMCLD_02320 2.8e-85 yvbK 3.1.3.25 K GNAT family
PNFHMCLD_02321 3.2e-37
PNFHMCLD_02322 8.2e-48
PNFHMCLD_02323 1.4e-110 pgm8 G Histidine phosphatase superfamily (branch 1)
PNFHMCLD_02324 3.8e-63 S Domain of unknown function (DUF4440)
PNFHMCLD_02325 6.9e-156 K LysR substrate binding domain
PNFHMCLD_02326 7.1e-104 GM NAD(P)H-binding
PNFHMCLD_02327 4.4e-194 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PNFHMCLD_02328 2.1e-149 IQ Enoyl-(Acyl carrier protein) reductase
PNFHMCLD_02329 1.3e-34
PNFHMCLD_02330 6.1e-76 T Belongs to the universal stress protein A family
PNFHMCLD_02331 1.3e-94 maa 2.3.1.18, 2.3.1.79 S Maltose O-acetyltransferase
PNFHMCLD_02332 2.2e-125 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PNFHMCLD_02333 6.3e-62
PNFHMCLD_02334 3.9e-102 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
PNFHMCLD_02335 3.1e-220 patB 4.4.1.8 E Aminotransferase, class I
PNFHMCLD_02336 7.4e-102 M Protein of unknown function (DUF3737)
PNFHMCLD_02337 1.2e-194 C Aldo/keto reductase family
PNFHMCLD_02339 0.0 mdlB V ABC transporter
PNFHMCLD_02340 0.0 mdlA V ABC transporter
PNFHMCLD_02341 2.6e-31 EGP Major facilitator Superfamily
PNFHMCLD_02342 2.1e-180 EGP Major facilitator Superfamily
PNFHMCLD_02345 3.6e-09
PNFHMCLD_02346 2.1e-198 yhgE V domain protein
PNFHMCLD_02347 1.5e-95 K Transcriptional regulator (TetR family)
PNFHMCLD_02348 1.4e-53 K helix_turn_helix, Arsenical Resistance Operon Repressor
PNFHMCLD_02349 1.7e-139 endA F DNA RNA non-specific endonuclease
PNFHMCLD_02350 6.3e-99 speG J Acetyltransferase (GNAT) domain
PNFHMCLD_02351 2.8e-96 2.3.1.128 J Acetyltransferase (GNAT) domain
PNFHMCLD_02352 1.1e-223 S CAAX protease self-immunity
PNFHMCLD_02353 1.2e-307 ybiT S ABC transporter, ATP-binding protein
PNFHMCLD_02354 2.8e-148 3.1.3.102, 3.1.3.104 S hydrolase
PNFHMCLD_02355 0.0 S Predicted membrane protein (DUF2207)
PNFHMCLD_02356 0.0 uvrA3 L excinuclease ABC
PNFHMCLD_02357 3.1e-207 EGP Major facilitator Superfamily
PNFHMCLD_02358 1.2e-171 ropB K Helix-turn-helix XRE-family like proteins
PNFHMCLD_02359 2e-233 yxiO S Vacuole effluxer Atg22 like
PNFHMCLD_02360 1.6e-254 npp S type I phosphodiesterase nucleotide pyrophosphatase
PNFHMCLD_02361 1.1e-158 I alpha/beta hydrolase fold
PNFHMCLD_02362 7e-130 treR K UTRA
PNFHMCLD_02363 7.8e-237
PNFHMCLD_02364 5.6e-39 S Cytochrome B5
PNFHMCLD_02365 7.5e-89 pts21A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PNFHMCLD_02366 2e-216 2.7.7.65 T Diguanylate cyclase, GGDEF domain
PNFHMCLD_02367 2.3e-110 yliE T EAL domain
PNFHMCLD_02368 3.2e-103 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PNFHMCLD_02369 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PNFHMCLD_02370 2e-80
PNFHMCLD_02371 4.5e-73 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PNFHMCLD_02372 2.6e-191 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PNFHMCLD_02373 5.8e-191 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PNFHMCLD_02374 4.9e-22
PNFHMCLD_02375 2.9e-70
PNFHMCLD_02376 1.2e-163 K LysR substrate binding domain
PNFHMCLD_02377 2.4e-243 P Sodium:sulfate symporter transmembrane region
PNFHMCLD_02378 2.4e-261 ubiD 4.1.1.98 H 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
PNFHMCLD_02379 5.1e-265 S response to antibiotic
PNFHMCLD_02380 2e-115 S zinc-ribbon domain
PNFHMCLD_02382 3.2e-37
PNFHMCLD_02383 8.2e-134 aroD S Alpha/beta hydrolase family
PNFHMCLD_02384 2.6e-176 S Phosphotransferase system, EIIC
PNFHMCLD_02385 2.5e-269 I acetylesterase activity
PNFHMCLD_02386 3.2e-219 sdrF M Collagen binding domain
PNFHMCLD_02387 2.4e-159 yicL EG EamA-like transporter family
PNFHMCLD_02388 4.9e-128 E lipolytic protein G-D-S-L family
PNFHMCLD_02389 1.7e-176 4.1.1.52 S Amidohydrolase
PNFHMCLD_02390 2.1e-111 K Transcriptional regulator C-terminal region
PNFHMCLD_02391 6.9e-47 3.6.4.12 K HxlR-like helix-turn-helix
PNFHMCLD_02392 2.7e-160 ypbG 2.7.1.2 GK ROK family
PNFHMCLD_02393 0.0 ybfG M peptidoglycan-binding domain-containing protein
PNFHMCLD_02394 5.6e-89
PNFHMCLD_02395 0.0 lmrA 3.6.3.44 V ABC transporter
PNFHMCLD_02396 5e-93 rmaB K Transcriptional regulator, MarR family
PNFHMCLD_02397 7.1e-159 ccpB 5.1.1.1 K lacI family
PNFHMCLD_02398 3e-121 yceE S haloacid dehalogenase-like hydrolase
PNFHMCLD_02399 1.3e-119 drgA C Nitroreductase family
PNFHMCLD_02400 0.0 nagE 2.7.1.193, 2.7.1.199, 2.7.1.211 G phosphotransferase system, EIIB
PNFHMCLD_02401 8.4e-117 cmpC S ATPases associated with a variety of cellular activities
PNFHMCLD_02402 6.1e-142 WQ51_06230 U Belongs to the binding-protein-dependent transport system permease family
PNFHMCLD_02403 1.5e-167 XK27_00670 S ABC transporter
PNFHMCLD_02404 3.9e-260
PNFHMCLD_02405 7.3e-62
PNFHMCLD_02406 5.1e-190 S Cell surface protein
PNFHMCLD_02407 2.3e-91 S WxL domain surface cell wall-binding
PNFHMCLD_02408 5.3e-63 acuB S Domain in cystathionine beta-synthase and other proteins.
PNFHMCLD_02409 1.8e-31 cp12 S Domain in cystathionine beta-synthase and other proteins.
PNFHMCLD_02410 3.3e-124 livF E ABC transporter
PNFHMCLD_02411 5.2e-139 livG E Branched-chain amino acid ATP-binding cassette transporter
PNFHMCLD_02412 5.3e-141 livM E Branched-chain amino acid transport system / permease component
PNFHMCLD_02413 6.5e-154 livH U Branched-chain amino acid transport system / permease component
PNFHMCLD_02414 1.6e-211 livJ E Receptor family ligand binding region
PNFHMCLD_02416 7e-33
PNFHMCLD_02417 1.7e-113 zmp3 O Zinc-dependent metalloprotease
PNFHMCLD_02418 2.8e-82 gtrA S GtrA-like protein
PNFHMCLD_02419 6.1e-122 K Helix-turn-helix XRE-family like proteins
PNFHMCLD_02420 4.1e-284 mntH P H( )-stimulated, divalent metal cation uptake system
PNFHMCLD_02421 6.8e-72 T Belongs to the universal stress protein A family
PNFHMCLD_02422 1.1e-46
PNFHMCLD_02423 1.9e-116 S SNARE associated Golgi protein
PNFHMCLD_02424 2e-49 K Transcriptional regulator, ArsR family
PNFHMCLD_02425 1.2e-95 cadD P Cadmium resistance transporter
PNFHMCLD_02426 0.0 yhcA V ABC transporter, ATP-binding protein
PNFHMCLD_02427 0.0 P Concanavalin A-like lectin/glucanases superfamily
PNFHMCLD_02428 7.4e-64
PNFHMCLD_02429 1.3e-159 T Calcineurin-like phosphoesterase superfamily domain
PNFHMCLD_02430 3.2e-55
PNFHMCLD_02431 5.3e-150 dicA K Helix-turn-helix domain
PNFHMCLD_02432 6.8e-75 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PNFHMCLD_02433 7e-53 ptcB 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PNFHMCLD_02434 3.5e-269 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PNFHMCLD_02435 3.1e-280 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PNFHMCLD_02436 9.1e-184 1.1.1.219 GM Male sterility protein
PNFHMCLD_02437 5.1e-75 K helix_turn_helix, mercury resistance
PNFHMCLD_02438 2.3e-65 M LysM domain
PNFHMCLD_02439 6.7e-87 M Lysin motif
PNFHMCLD_02440 2.3e-107 S SdpI/YhfL protein family
PNFHMCLD_02441 1.8e-54 nudA S ASCH
PNFHMCLD_02442 5e-162 psaA P Belongs to the bacterial solute-binding protein 9 family
PNFHMCLD_02443 4.2e-92
PNFHMCLD_02444 2e-120 tag 3.2.2.20 L Methyladenine glycosylase
PNFHMCLD_02445 5.8e-202 T diguanylate cyclase
PNFHMCLD_02446 1.2e-73 S Psort location Cytoplasmic, score
PNFHMCLD_02447 2.1e-285 dinB 2.7.7.7 L impB/mucB/samB family C-terminal domain
PNFHMCLD_02448 8.6e-218 ykiI
PNFHMCLD_02449 0.0 V ABC transporter
PNFHMCLD_02450 6.2e-310 XK27_09600 V ABC transporter, ATP-binding protein
PNFHMCLD_02452 7.1e-228 amd 3.5.1.47 E Peptidase family M20/M25/M40
PNFHMCLD_02453 7.7e-163 IQ KR domain
PNFHMCLD_02455 7.4e-71
PNFHMCLD_02456 4.3e-144 K Helix-turn-helix XRE-family like proteins
PNFHMCLD_02457 9.6e-267 yjeM E Amino Acid
PNFHMCLD_02458 1.1e-65 lysM M LysM domain
PNFHMCLD_02459 1.3e-223 dhaT 1.1.1.1, 1.1.1.202 C Dehydrogenase
PNFHMCLD_02460 2.7e-213 adhC 1.1.1.90 C Zn-dependent alcohol dehydrogenases, class III
PNFHMCLD_02461 0.0 ctpA 3.6.3.54 P P-type ATPase
PNFHMCLD_02462 3.2e-43 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PNFHMCLD_02463 2.4e-65 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PNFHMCLD_02464 0.0 M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PNFHMCLD_02465 6e-140 K Helix-turn-helix domain
PNFHMCLD_02466 2.9e-38 S TfoX C-terminal domain
PNFHMCLD_02467 1e-227 hpk9 2.7.13.3 T GHKL domain
PNFHMCLD_02468 8.4e-263
PNFHMCLD_02469 1.3e-75
PNFHMCLD_02470 3.6e-183 S Cell surface protein
PNFHMCLD_02471 1.7e-101 S WxL domain surface cell wall-binding
PNFHMCLD_02472 2.3e-176 1.6.5.5 C Alcohol dehydrogenase GroES-like domain
PNFHMCLD_02473 1.3e-66 S Iron-sulphur cluster biosynthesis
PNFHMCLD_02474 1.8e-113 S GyrI-like small molecule binding domain
PNFHMCLD_02475 6.2e-188 S Cell surface protein
PNFHMCLD_02476 7.5e-101 S WxL domain surface cell wall-binding
PNFHMCLD_02477 3.2e-62
PNFHMCLD_02478 3.1e-210 NU Mycoplasma protein of unknown function, DUF285
PNFHMCLD_02479 5.9e-117
PNFHMCLD_02480 1e-116 S Haloacid dehalogenase-like hydrolase
PNFHMCLD_02481 2e-61 K Transcriptional regulator, HxlR family
PNFHMCLD_02482 5.1e-210 ytbD EGP Major facilitator Superfamily
PNFHMCLD_02483 1.4e-94 M ErfK YbiS YcfS YnhG
PNFHMCLD_02484 0.0 asnB 6.3.5.4 E Asparagine synthase
PNFHMCLD_02485 1.7e-134 K LytTr DNA-binding domain
PNFHMCLD_02486 4.3e-204 2.7.13.3 T GHKL domain
PNFHMCLD_02487 1.5e-95 fadR K Bacterial regulatory proteins, tetR family
PNFHMCLD_02488 2e-166 GM NmrA-like family
PNFHMCLD_02489 4.5e-266 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
PNFHMCLD_02490 0.0 M Glycosyl hydrolases family 25
PNFHMCLD_02491 1e-47 S Domain of unknown function (DUF1905)
PNFHMCLD_02492 8.3e-63 hxlR K HxlR-like helix-turn-helix
PNFHMCLD_02493 9.8e-132 ydfG S KR domain
PNFHMCLD_02494 4.8e-94 K Bacterial regulatory proteins, tetR family
PNFHMCLD_02495 1.2e-191 1.1.1.219 GM Male sterility protein
PNFHMCLD_02496 1.6e-100 S Protein of unknown function (DUF1211)
PNFHMCLD_02497 1.7e-179 S Aldo keto reductase
PNFHMCLD_02499 2.1e-253 yfjF U Sugar (and other) transporter
PNFHMCLD_02500 4.3e-109 K Bacterial regulatory proteins, tetR family
PNFHMCLD_02501 4e-170 fhuD P Periplasmic binding protein
PNFHMCLD_02502 7.2e-144 fhuC 3.6.3.34 HP ABC transporter
PNFHMCLD_02503 1.5e-18 sirB U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PNFHMCLD_02504 1e-137 sirB U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PNFHMCLD_02505 7.8e-172 fhuG U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PNFHMCLD_02506 5.4e-92 K Bacterial regulatory proteins, tetR family
PNFHMCLD_02507 5.4e-164 GM NmrA-like family
PNFHMCLD_02508 2.5e-130 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PNFHMCLD_02509 1.3e-68 maa S transferase hexapeptide repeat
PNFHMCLD_02510 6.4e-151 IQ Enoyl-(Acyl carrier protein) reductase
PNFHMCLD_02511 2.3e-63 K helix_turn_helix, mercury resistance
PNFHMCLD_02512 0.0 pelX UW LPXTG-motif cell wall anchor domain protein
PNFHMCLD_02513 8.2e-172 S Bacterial protein of unknown function (DUF916)
PNFHMCLD_02514 4.3e-90 S WxL domain surface cell wall-binding
PNFHMCLD_02515 7.6e-183 NU Mycoplasma protein of unknown function, DUF285
PNFHMCLD_02516 8.1e-117 K Bacterial regulatory proteins, tetR family
PNFHMCLD_02517 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PNFHMCLD_02518 2.5e-289 yjcE P Sodium proton antiporter
PNFHMCLD_02519 5.7e-152 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
PNFHMCLD_02520 6.9e-159 K LysR substrate binding domain
PNFHMCLD_02521 4e-281 1.3.5.4 C FAD binding domain
PNFHMCLD_02522 0.0 3.2.1.4, 3.2.1.78, 3.2.1.8 GH26,GH5,GH9 S MucBP domain
PNFHMCLD_02523 1.7e-84 dps P Belongs to the Dps family
PNFHMCLD_02524 2.2e-115 K UTRA
PNFHMCLD_02525 7.5e-269 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PNFHMCLD_02526 1.6e-247 celD G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PNFHMCLD_02527 4.1e-65
PNFHMCLD_02528 6.6e-12
PNFHMCLD_02529 9.4e-41 4.1.1.44 S Carboxymuconolactone decarboxylase family
PNFHMCLD_02530 1.3e-23 rmeD K helix_turn_helix, mercury resistance
PNFHMCLD_02531 7.6e-64 S Protein of unknown function (DUF1093)
PNFHMCLD_02532 1.4e-205 S Membrane
PNFHMCLD_02533 1.1e-43 S Protein of unknown function (DUF3781)
PNFHMCLD_02534 1.3e-93 ydeA S intracellular protease amidase
PNFHMCLD_02535 2.2e-41 K HxlR-like helix-turn-helix
PNFHMCLD_02536 3.3e-66
PNFHMCLD_02537 1.3e-64 V ABC transporter
PNFHMCLD_02538 2.3e-51 K Helix-turn-helix domain
PNFHMCLD_02539 1.7e-204 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
PNFHMCLD_02540 1.4e-46 K Helix-turn-helix domain
PNFHMCLD_02541 8.8e-91 S ABC-2 family transporter protein
PNFHMCLD_02542 6.3e-57 S ABC-2 family transporter protein
PNFHMCLD_02543 1.3e-88 V ABC transporter, ATP-binding protein
PNFHMCLD_02544 8.8e-40
PNFHMCLD_02545 7.9e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PNFHMCLD_02546 4.9e-172 K AI-2E family transporter
PNFHMCLD_02547 1.7e-210 xylR GK ROK family
PNFHMCLD_02548 2.3e-81
PNFHMCLD_02549 4.7e-232 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PNFHMCLD_02550 3.9e-162
PNFHMCLD_02551 4.2e-200 KLT Protein tyrosine kinase
PNFHMCLD_02552 2.9e-23 S Protein of unknown function (DUF4064)
PNFHMCLD_02553 6e-97 S Domain of unknown function (DUF4352)
PNFHMCLD_02554 3.9e-75 S Psort location Cytoplasmic, score
PNFHMCLD_02555 4.8e-55
PNFHMCLD_02556 3.6e-110 S membrane transporter protein
PNFHMCLD_02557 2.3e-54 azlD S branched-chain amino acid
PNFHMCLD_02558 5.1e-131 azlC E branched-chain amino acid
PNFHMCLD_02559 6.4e-90 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
PNFHMCLD_02560 2.1e-236 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PNFHMCLD_02561 1.3e-213 hpk31 2.7.13.3 T Histidine kinase
PNFHMCLD_02562 3.2e-124 K response regulator
PNFHMCLD_02563 5.5e-124 yoaK S Protein of unknown function (DUF1275)
PNFHMCLD_02564 2.6e-161 prsA 3.1.3.16, 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PNFHMCLD_02565 5.2e-212 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PNFHMCLD_02566 5.2e-125 XK27_01040 S Protein of unknown function (DUF1129)
PNFHMCLD_02567 2e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PNFHMCLD_02568 9.8e-31 yyzM S Bacterial protein of unknown function (DUF951)
PNFHMCLD_02569 2.4e-156 spo0J K Belongs to the ParB family
PNFHMCLD_02570 1.8e-136 soj D Sporulation initiation inhibitor
PNFHMCLD_02571 7.9e-149 noc K Belongs to the ParB family
PNFHMCLD_02572 1.9e-130 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PNFHMCLD_02573 4.1e-226 nupG F Nucleoside
PNFHMCLD_02574 0.0 S Bacterial membrane protein YfhO
PNFHMCLD_02575 1.4e-145 S Alpha/beta hydrolase of unknown function (DUF915)
PNFHMCLD_02576 2.1e-168 K LysR substrate binding domain
PNFHMCLD_02577 9.4e-236 EK Aminotransferase, class I
PNFHMCLD_02578 2.3e-126 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PNFHMCLD_02579 8.1e-123 tcyB E ABC transporter
PNFHMCLD_02580 3.6e-137 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PNFHMCLD_02581 3.3e-120 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PNFHMCLD_02582 5.8e-79 KT response to antibiotic
PNFHMCLD_02583 2.8e-51 K Transcriptional regulator
PNFHMCLD_02584 7.7e-72 XK27_06920 S Protein of unknown function (DUF1700)
PNFHMCLD_02585 1.6e-126 S Putative adhesin
PNFHMCLD_02586 0.0 scrA 2.7.1.193, 2.7.1.211 G phosphotransferase system
PNFHMCLD_02587 0.0 malA 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
PNFHMCLD_02588 4.1e-181 5.1.1.1 K Periplasmic binding proteins and sugar binding domain of LacI family
PNFHMCLD_02589 2.6e-205 S DUF218 domain
PNFHMCLD_02590 6.8e-128 ybbM S Uncharacterised protein family (UPF0014)
PNFHMCLD_02591 1.4e-116 ybbL S ABC transporter, ATP-binding protein
PNFHMCLD_02592 4.2e-275 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PNFHMCLD_02593 9.4e-77
PNFHMCLD_02594 2.2e-151 qorB 1.6.5.2 GM NmrA-like family
PNFHMCLD_02595 1.1e-147 cof S haloacid dehalogenase-like hydrolase
PNFHMCLD_02596 3.7e-93 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PNFHMCLD_02597 9.8e-307 mngB 3.2.1.170, 3.2.1.24 GH38 G Glycosyl hydrolases family 38 N-terminal domain
PNFHMCLD_02598 2.8e-122 mngA 2.7.1.195, 2.7.1.202 U Phosphotransferase system, EIIC
PNFHMCLD_02599 2.4e-26 mngA 2.7.1.195, 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
PNFHMCLD_02600 1.7e-20 fryA 2.7.1.202 G COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type)
PNFHMCLD_02601 2.9e-90 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PNFHMCLD_02602 2e-77 merR K MerR family regulatory protein
PNFHMCLD_02603 9e-156 1.6.5.2 GM NmrA-like family
PNFHMCLD_02604 0.0 treB 2.7.1.193, 2.7.1.211 G phosphotransferase system
PNFHMCLD_02605 3.9e-127 magIII L Base excision DNA repair protein, HhH-GPD family
PNFHMCLD_02606 1.4e-08
PNFHMCLD_02607 2e-100 S NADPH-dependent FMN reductase
PNFHMCLD_02608 7.9e-238 S module of peptide synthetase
PNFHMCLD_02609 8.4e-105
PNFHMCLD_02610 9.8e-88 perR P Belongs to the Fur family
PNFHMCLD_02611 7.1e-59 S Enterocin A Immunity
PNFHMCLD_02612 5.4e-36 S Phospholipase_D-nuclease N-terminal
PNFHMCLD_02613 1.8e-169 cpdA 2.1.2.2, 3.1.4.17, 3.1.4.53 S Calcineurin-like phosphoesterase
PNFHMCLD_02614 3.8e-104 J Acetyltransferase (GNAT) domain
PNFHMCLD_02615 5.1e-64 lrgA S LrgA family
PNFHMCLD_02616 7.3e-127 lrgB M LrgB-like family
PNFHMCLD_02617 3.5e-144 DegV S EDD domain protein, DegV family
PNFHMCLD_02618 4.1e-25
PNFHMCLD_02619 5e-117 yugP S Putative neutral zinc metallopeptidase
PNFHMCLD_02620 1.1e-294 crtI 1.3.99.26, 1.3.99.28, 1.3.99.29, 1.3.99.31 Q Flavin containing amine oxidoreductase
PNFHMCLD_02621 6.9e-164 crtB 2.5.1.21, 2.5.1.32, 2.5.1.99 I Squalene/phytoene synthase
PNFHMCLD_02622 2.7e-154 D Alpha beta
PNFHMCLD_02623 8.3e-199 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PNFHMCLD_02624 1.9e-258 gor 1.8.1.7 C Glutathione reductase
PNFHMCLD_02625 3.4e-55 S Enterocin A Immunity
PNFHMCLD_02626 9.6e-247 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PNFHMCLD_02627 1.4e-253 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PNFHMCLD_02628 1.3e-184 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PNFHMCLD_02629 4.9e-145 ptp2 3.1.3.48 T Tyrosine phosphatase family
PNFHMCLD_02630 8.1e-279 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PNFHMCLD_02632 2.1e-82
PNFHMCLD_02633 2.3e-257 yhdG E C-terminus of AA_permease
PNFHMCLD_02635 0.0 kup P Transport of potassium into the cell
PNFHMCLD_02636 4.6e-166 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PNFHMCLD_02637 5.3e-179 K AI-2E family transporter
PNFHMCLD_02638 3.7e-215 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
PNFHMCLD_02639 5.8e-59 qacC P Small Multidrug Resistance protein
PNFHMCLD_02640 1.1e-44 qacH U Small Multidrug Resistance protein
PNFHMCLD_02641 3e-116 hly S protein, hemolysin III
PNFHMCLD_02642 1.1e-53 nmtR K helix_turn_helix, Arsenical Resistance Operon Repressor
PNFHMCLD_02643 2.7e-160 czcD P cation diffusion facilitator family transporter
PNFHMCLD_02644 2.6e-19
PNFHMCLD_02645 6.5e-96 tag 3.2.2.20 L glycosylase
PNFHMCLD_02646 2.3e-212 folP 2.5.1.15 H dihydropteroate synthase
PNFHMCLD_02647 7.7e-103 xtp 2.5.1.15, 3.6.1.66 F Ham1 family
PNFHMCLD_02648 1.8e-248 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PNFHMCLD_02649 2.6e-103 folE 2.7.6.3, 3.5.4.16 F GTP cyclohydrolase 1
PNFHMCLD_02650 2.8e-93 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
PNFHMCLD_02651 2.2e-63 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PNFHMCLD_02652 4.7e-83 cvpA S Colicin V production protein
PNFHMCLD_02653 2e-169 znuA P Belongs to the bacterial solute-binding protein 9 family
PNFHMCLD_02654 1.3e-249 EGP Major facilitator Superfamily
PNFHMCLD_02656 7e-40
PNFHMCLD_02657 1.5e-42 S COG NOG38524 non supervised orthologous group
PNFHMCLD_02658 5.2e-95 V VanZ like family
PNFHMCLD_02659 5e-195 blaA6 V Beta-lactamase
PNFHMCLD_02660 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
PNFHMCLD_02661 6.7e-161 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PNFHMCLD_02662 1.9e-52 yitW S Pfam:DUF59
PNFHMCLD_02663 5e-173 S Aldo keto reductase
PNFHMCLD_02664 3.3e-97 FG HIT domain
PNFHMCLD_02665 8.1e-38 S Bacteriocin-protection, YdeI or OmpD-Associated
PNFHMCLD_02666 1.4e-77
PNFHMCLD_02667 3.2e-115 E GDSL-like Lipase/Acylhydrolase family
PNFHMCLD_02668 1.1e-306 U Belongs to the BCCT transporter (TC 2.A.15) family
PNFHMCLD_02669 0.0 cadA P P-type ATPase
PNFHMCLD_02671 1.8e-124 yyaQ S YjbR
PNFHMCLD_02672 1.7e-218 S Uncharacterized protein conserved in bacteria (DUF2325)
PNFHMCLD_02673 0.0 ade 3.5.4.2 F Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PNFHMCLD_02674 1.1e-198 frlB M SIS domain
PNFHMCLD_02675 3e-26 3.2.2.10 S Belongs to the LOG family
PNFHMCLD_02676 3.4e-253 nhaC C Na H antiporter NhaC
PNFHMCLD_02677 2e-250 cycA E Amino acid permease
PNFHMCLD_02678 3.6e-168 S Alpha/beta hydrolase of unknown function (DUF915)
PNFHMCLD_02679 1.6e-85 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
PNFHMCLD_02680 1.2e-160 azoB GM NmrA-like family
PNFHMCLD_02681 5.4e-66 K Winged helix DNA-binding domain
PNFHMCLD_02682 7e-71 spx4 1.20.4.1 P ArsC family
PNFHMCLD_02683 1.7e-66 yeaO S Protein of unknown function, DUF488
PNFHMCLD_02684 4e-53
PNFHMCLD_02685 5.9e-213 mutY L A G-specific adenine glycosylase
PNFHMCLD_02686 1.9e-62
PNFHMCLD_02687 9.7e-86
PNFHMCLD_02688 2e-79 hsp3 O Belongs to the small heat shock protein (HSP20) family
PNFHMCLD_02689 5.9e-55
PNFHMCLD_02690 2.1e-14
PNFHMCLD_02691 1.1e-115 GM NmrA-like family
PNFHMCLD_02692 5e-81 elaA S GNAT family
PNFHMCLD_02693 5.9e-158 EG EamA-like transporter family
PNFHMCLD_02694 1.8e-119 S membrane
PNFHMCLD_02695 6.8e-111 S VIT family
PNFHMCLD_02696 1.3e-190 pva2 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
PNFHMCLD_02697 0.0 copB 3.6.3.4 P P-type ATPase
PNFHMCLD_02698 4.7e-73 copR K Copper transport repressor CopY TcrY
PNFHMCLD_02699 7.4e-40
PNFHMCLD_02700 7.7e-73 S COG NOG18757 non supervised orthologous group
PNFHMCLD_02701 1.5e-248 lmrB EGP Major facilitator Superfamily
PNFHMCLD_02702 3.4e-25
PNFHMCLD_02703 4.2e-49
PNFHMCLD_02704 1.6e-64 ycgX S Protein of unknown function (DUF1398)
PNFHMCLD_02705 5.2e-251 U Belongs to the purine-cytosine permease (2.A.39) family
PNFHMCLD_02706 5.9e-214 mdtG EGP Major facilitator Superfamily
PNFHMCLD_02707 3.4e-180 D Alpha beta
PNFHMCLD_02708 3.1e-78 M1-874 K Domain of unknown function (DUF1836)
PNFHMCLD_02709 5.9e-85 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
PNFHMCLD_02710 0.0 pacL3 3.6.3.8 P Cation transporter/ATPase, N-terminus
PNFHMCLD_02711 1.5e-310 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PNFHMCLD_02712 8.4e-152 ywkB S Membrane transport protein
PNFHMCLD_02713 5.2e-164 yvgN C Aldo keto reductase
PNFHMCLD_02714 9.2e-133 thrE S Putative threonine/serine exporter
PNFHMCLD_02715 7.5e-77 S Threonine/Serine exporter, ThrE
PNFHMCLD_02716 2.3e-43 S Protein of unknown function (DUF1093)
PNFHMCLD_02717 1.1e-147 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PNFHMCLD_02718 2.7e-91 ymdB S Macro domain protein
PNFHMCLD_02719 5.8e-95 K transcriptional regulator
PNFHMCLD_02720 5.5e-50 yvlA
PNFHMCLD_02721 1.7e-160 ypuA S Protein of unknown function (DUF1002)
PNFHMCLD_02722 0.0
PNFHMCLD_02723 5.8e-186 S Bacterial protein of unknown function (DUF916)
PNFHMCLD_02724 2.5e-128 S WxL domain surface cell wall-binding
PNFHMCLD_02725 1.3e-136 T Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
PNFHMCLD_02726 1.3e-87 K Winged helix DNA-binding domain
PNFHMCLD_02727 2.4e-116 luxT K Bacterial regulatory proteins, tetR family
PNFHMCLD_02728 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
PNFHMCLD_02729 1.8e-27
PNFHMCLD_02730 5e-281 gadB 4.1.1.15 E Belongs to the group II decarboxylase family
PNFHMCLD_02731 2e-72 mltD CBM50 M PFAM NLP P60 protein
PNFHMCLD_02732 5.5e-53
PNFHMCLD_02733 1.6e-61
PNFHMCLD_02735 6.7e-13
PNFHMCLD_02736 4.9e-102 K transcriptional regulator
PNFHMCLD_02737 1.4e-181 yfeX P Peroxidase
PNFHMCLD_02738 1.3e-136 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PNFHMCLD_02739 6.3e-128 ydcF S Gram-negative-bacterium-type cell wall biogenesis
PNFHMCLD_02740 3.6e-182 celE 3.2.1.4 GH5,GH9 E GDSL-like Lipase/Acylhydrolase family
PNFHMCLD_02741 0.0 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
PNFHMCLD_02742 6.3e-142 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PNFHMCLD_02743 1.5e-55 txlA O Thioredoxin-like domain
PNFHMCLD_02744 4.3e-40 yrkD S Metal-sensitive transcriptional repressor
PNFHMCLD_02745 1.2e-18
PNFHMCLD_02746 6.6e-96 dps P Belongs to the Dps family
PNFHMCLD_02747 1.6e-32 copZ P Heavy-metal-associated domain
PNFHMCLD_02748 3.3e-118 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
PNFHMCLD_02749 0.0 pepO 3.4.24.71 O Peptidase family M13
PNFHMCLD_02750 3.2e-83 yoaA 2.3.1.128 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PNFHMCLD_02751 1.3e-262 nox C NADH oxidase
PNFHMCLD_02752 0.0 XK27_00720 S Leucine-rich repeat (LRR) protein
PNFHMCLD_02753 6.1e-164 S Cell surface protein
PNFHMCLD_02754 1.5e-118 S WxL domain surface cell wall-binding
PNFHMCLD_02755 2.3e-99 S WxL domain surface cell wall-binding
PNFHMCLD_02756 1.7e-44
PNFHMCLD_02757 7.7e-103 K Bacterial regulatory proteins, tetR family
PNFHMCLD_02758 1.5e-49
PNFHMCLD_02759 4e-248 S Putative metallopeptidase domain
PNFHMCLD_02760 7.8e-219 3.1.3.1 S associated with various cellular activities
PNFHMCLD_02761 1.8e-108 aqpZ U Belongs to the MIP aquaporin (TC 1.A.8) family
PNFHMCLD_02762 0.0 ubiB S ABC1 family
PNFHMCLD_02763 1.4e-248 brnQ U Component of the transport system for branched-chain amino acids
PNFHMCLD_02764 0.0 3.2.1.40 G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PNFHMCLD_02765 2.3e-229 mdtH P Sugar (and other) transporter
PNFHMCLD_02766 4.2e-305 ram2 3.2.1.40 G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PNFHMCLD_02767 8.6e-232 EGP Major facilitator Superfamily
PNFHMCLD_02768 7.4e-183 rhaR K helix_turn_helix, arabinose operon control protein
PNFHMCLD_02769 5.3e-107 fic D Fic/DOC family
PNFHMCLD_02770 8e-76 K Helix-turn-helix XRE-family like proteins
PNFHMCLD_02771 4.6e-180 galR K Transcriptional regulator
PNFHMCLD_02772 2.9e-284 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PNFHMCLD_02773 3.4e-191 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PNFHMCLD_02774 4.6e-224 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PNFHMCLD_02775 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PNFHMCLD_02776 8.3e-187 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
PNFHMCLD_02777 0.0 rafA 3.2.1.22 G alpha-galactosidase
PNFHMCLD_02778 0.0 lacS G Transporter
PNFHMCLD_02779 4.5e-199 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PNFHMCLD_02780 1.1e-173 galR K Transcriptional regulator
PNFHMCLD_02781 8.2e-193 C Aldo keto reductase family protein
PNFHMCLD_02782 5.2e-65 S pyridoxamine 5-phosphate
PNFHMCLD_02783 0.0 1.3.5.4 C FAD binding domain
PNFHMCLD_02784 4.8e-179 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PNFHMCLD_02785 1.5e-130 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PNFHMCLD_02786 2.7e-214 ydiM G Transporter
PNFHMCLD_02787 4.2e-169 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PNFHMCLD_02788 9.9e-163 K Transcriptional regulator, LysR family
PNFHMCLD_02789 1.8e-210 ydiN G Major Facilitator Superfamily
PNFHMCLD_02790 1e-63
PNFHMCLD_02791 9e-155 estA S Putative esterase
PNFHMCLD_02792 1.2e-134 K UTRA domain
PNFHMCLD_02793 6.2e-249 pts29C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PNFHMCLD_02794 8.2e-163 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PNFHMCLD_02795 2.2e-157 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
PNFHMCLD_02796 1.1e-211 S Bacterial protein of unknown function (DUF871)
PNFHMCLD_02797 1.4e-291 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PNFHMCLD_02798 0.0 pts30BCA 2.7.1.193, 2.7.1.211 G phosphotransferase system
PNFHMCLD_02799 1.3e-154 licT K CAT RNA binding domain
PNFHMCLD_02800 1.9e-291 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PNFHMCLD_02801 7.2e-291 pbg10 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PNFHMCLD_02802 0.0 bglP 2.7.1.193, 2.7.1.211 G phosphotransferase system
PNFHMCLD_02803 1.6e-157 licT K CAT RNA binding domain
PNFHMCLD_02804 0.0 treP 2.4.1.64 GH65 G hydrolase, family 65, central catalytic
PNFHMCLD_02805 1.1e-173 K Transcriptional regulator, LacI family
PNFHMCLD_02806 2.3e-270 G Major Facilitator
PNFHMCLD_02807 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PNFHMCLD_02809 4.1e-220 L Transposase
PNFHMCLD_02810 1.1e-186 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PNFHMCLD_02811 4.3e-144 yxeH S hydrolase
PNFHMCLD_02812 0.0 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PNFHMCLD_02813 8.3e-114 tal 2.2.1.2 F Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PNFHMCLD_02814 3.2e-240 ulaA 2.7.1.194 S PTS system sugar-specific permease component
PNFHMCLD_02815 2.2e-45 ulaB 2.7.1.194, 2.7.1.200 G Phosphotransferase system galactitol-specific IIB component
PNFHMCLD_02816 6.7e-78 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PNFHMCLD_02817 0.0 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PNFHMCLD_02818 1.8e-113 gph 3.1.3.18 S Haloacid dehalogenase-like hydrolase
PNFHMCLD_02819 3.3e-187 gutB 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
PNFHMCLD_02820 1.1e-231 gatC G PTS system sugar-specific permease component
PNFHMCLD_02821 1.1e-44 2.7.1.194, 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
PNFHMCLD_02822 1.5e-80 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PNFHMCLD_02823 7e-112 K DeoR C terminal sensor domain
PNFHMCLD_02824 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PNFHMCLD_02825 7.4e-136 K Helix-turn-helix domain, rpiR family
PNFHMCLD_02826 3.7e-72 yueI S Protein of unknown function (DUF1694)
PNFHMCLD_02827 2.9e-164 I alpha/beta hydrolase fold
PNFHMCLD_02828 1.3e-159 I alpha/beta hydrolase fold
PNFHMCLD_02829 1.7e-271 nanT E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PNFHMCLD_02830 7.9e-172 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PNFHMCLD_02831 7.4e-10 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PNFHMCLD_02832 1.6e-134 kguE 2.7.1.45 G Xylose isomerase domain protein TIM barrel
PNFHMCLD_02833 1.4e-153 nanK GK ROK family
PNFHMCLD_02834 6.2e-165 nanA 4.1.3.3, 4.3.3.7 EM Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
PNFHMCLD_02835 1.8e-122 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PNFHMCLD_02836 1.3e-229 1.7.1.15 S Pyridine nucleotide-disulphide oxidoreductase
PNFHMCLD_02837 4.2e-70 S Pyrimidine dimer DNA glycosylase
PNFHMCLD_02838 1.6e-89 folT 2.7.13.3 T ECF transporter, substrate-specific component
PNFHMCLD_02839 3.6e-11
PNFHMCLD_02840 9e-13 ytgB S Transglycosylase associated protein
PNFHMCLD_02841 2.6e-263 katA 1.11.1.6 C Belongs to the catalase family
PNFHMCLD_02842 1.7e-176 L Transposase and inactivated derivatives, IS30 family
PNFHMCLD_02843 4.9e-78 yneH 1.20.4.1 K ArsC family
PNFHMCLD_02844 7.4e-135 K LytTr DNA-binding domain
PNFHMCLD_02845 8.7e-160 2.7.13.3 T GHKL domain
PNFHMCLD_02846 1.8e-12
PNFHMCLD_02847 2.4e-67 agrB KOT May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor
PNFHMCLD_02848 0.0 clpL O C-terminal, D2-small domain, of ClpB protein
PNFHMCLD_02850 2.6e-200 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PNFHMCLD_02851 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PNFHMCLD_02852 8.7e-72 K Transcriptional regulator
PNFHMCLD_02853 0.0 spxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PNFHMCLD_02854 8.6e-63 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PNFHMCLD_02855 1.5e-173 srlE 2.7.1.198 G Sorbitol phosphotransferase enzyme II N-terminus
PNFHMCLD_02856 2e-100 srlA G PTS system enzyme II sorbitol-specific factor
PNFHMCLD_02857 1.1e-86 gutM K Glucitol operon activator protein (GutM)
PNFHMCLD_02858 0.0 srlM 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Mga helix-turn-helix domain
PNFHMCLD_02859 3.8e-145 IQ NAD dependent epimerase/dehydratase family
PNFHMCLD_02860 2.7e-160 rbsU U ribose uptake protein RbsU
PNFHMCLD_02861 7.9e-67 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PNFHMCLD_02862 6.7e-162 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PNFHMCLD_02863 5.2e-188 rbsR K helix_turn _helix lactose operon repressor
PNFHMCLD_02865 1.7e-08
PNFHMCLD_02866 6.2e-54
PNFHMCLD_02867 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PNFHMCLD_02868 2.7e-79 T Universal stress protein family
PNFHMCLD_02869 2.2e-99 padR K Virulence activator alpha C-term
PNFHMCLD_02870 1.6e-102 padC Q Phenolic acid decarboxylase
PNFHMCLD_02871 6.7e-142 tesE Q hydratase
PNFHMCLD_02872 2.2e-87 yjaB_1 K Acetyltransferase (GNAT) domain
PNFHMCLD_02873 2.8e-157 degV S DegV family
PNFHMCLD_02874 8.4e-59 2.6.1.2, 2.6.1.66 K Bacteriophage CI repressor helix-turn-helix domain
PNFHMCLD_02875 1.5e-255 pepC 3.4.22.40 E aminopeptidase
PNFHMCLD_02877 1.2e-108 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PNFHMCLD_02878 1.1e-302
PNFHMCLD_02880 3e-158 S Bacterial protein of unknown function (DUF916)
PNFHMCLD_02881 2.4e-93 S Cell surface protein
PNFHMCLD_02882 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PNFHMCLD_02883 4.6e-255 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PNFHMCLD_02884 9.1e-109 jag S R3H domain protein
PNFHMCLD_02885 1.3e-237 Q Imidazolonepropionase and related amidohydrolases
PNFHMCLD_02886 1e-309 E ABC transporter, substratebinding protein
PNFHMCLD_02887 1.8e-105 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PNFHMCLD_02888 6.4e-57 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PNFHMCLD_02889 4.5e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PNFHMCLD_02890 6.4e-09 S Protein of unknown function (DUF2992)
PNFHMCLD_02891 2.7e-06
PNFHMCLD_02893 3.5e-50
PNFHMCLD_02894 8.7e-157 L Initiator Replication protein
PNFHMCLD_02895 7.1e-29
PNFHMCLD_02896 3.1e-62
PNFHMCLD_02897 5.7e-106 L Integrase
PNFHMCLD_02898 1.7e-44 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PNFHMCLD_02899 3.2e-59 yafQ S Bacterial toxin of type II toxin-antitoxin system, YafQ
PNFHMCLD_02900 1.7e-84 dps P Belongs to the Dps family
PNFHMCLD_02901 2.8e-88
PNFHMCLD_02902 8.3e-176 L Initiator Replication protein
PNFHMCLD_02903 2.5e-29
PNFHMCLD_02904 8.8e-107 L Integrase
PNFHMCLD_02905 2.4e-40 K prlF antitoxin for toxin YhaV_toxin
PNFHMCLD_02906 5.3e-59 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PNFHMCLD_02907 0.0 ybfG M peptidoglycan-binding domain-containing protein
PNFHMCLD_02909 6.9e-201 L MobA MobL family protein
PNFHMCLD_02910 2.1e-26
PNFHMCLD_02911 6.8e-41
PNFHMCLD_02912 3.5e-115 S protein conserved in bacteria
PNFHMCLD_02913 5.9e-28
PNFHMCLD_02914 7.4e-43 relB L Addiction module antitoxin, RelB DinJ family
PNFHMCLD_02915 2.7e-133 repA S Replication initiator protein A
PNFHMCLD_02916 1.2e-53
PNFHMCLD_02917 7.2e-43
PNFHMCLD_02918 1.1e-195 O Heat shock 70 kDa protein
PNFHMCLD_02919 1.1e-120
PNFHMCLD_02920 3.8e-106 dam 2.1.1.72 H Site-specific DNA-methyltransferase (adenine-specific)
PNFHMCLD_02921 1.4e-102 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PNFHMCLD_02923 3.2e-198 L Psort location Cytoplasmic, score
PNFHMCLD_02924 6.9e-33
PNFHMCLD_02925 0.0 traI 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PNFHMCLD_02927 1e-159
PNFHMCLD_02928 3e-263 traK U TraM recognition site of TraD and TraG
PNFHMCLD_02929 2.5e-80
PNFHMCLD_02930 3.5e-61 CO COG0526, thiol-disulfide isomerase and thioredoxins
PNFHMCLD_02931 2e-85
PNFHMCLD_02932 1.2e-208 M CHAP domain
PNFHMCLD_02933 1.7e-244 polC 2.4.1.129, 2.7.7.7, 3.4.16.4 GT51 S WXG100 protein secretion system (Wss), protein YukC
PNFHMCLD_02934 0.0 U AAA-like domain
PNFHMCLD_02935 4.3e-118
PNFHMCLD_02936 4e-49
PNFHMCLD_02937 6.1e-52 S Cag pathogenicity island, type IV secretory system
PNFHMCLD_02938 8.3e-108
PNFHMCLD_02939 3.1e-32
PNFHMCLD_02940 3.4e-163 D This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PNFHMCLD_02941 1.1e-220 L Transposase
PNFHMCLD_02942 2.4e-37 KT PspC domain protein
PNFHMCLD_02943 3e-80 ydhK M Protein of unknown function (DUF1541)
PNFHMCLD_02944 0.0 lai 4.2.1.53 S Myosin-crossreactive antigen
PNFHMCLD_02945 5.1e-15
PNFHMCLD_02946 1e-96 K Bacterial regulatory proteins, tetR family
PNFHMCLD_02947 1.1e-57 dhaM 2.7.1.121 S PTS system fructose IIA component
PNFHMCLD_02948 8.5e-102 dhaL 2.7.1.121 S Dak2
PNFHMCLD_02949 5.5e-189 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PNFHMCLD_02950 4.6e-174 L Transposase and inactivated derivatives, IS30 family
PNFHMCLD_02951 3.7e-173 2.1.1.80, 3.1.1.61, 3.4.21.105 L DNA recombination
PNFHMCLD_02953 5.7e-146 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 G Belongs to the glycosyl hydrolase 68 family
PNFHMCLD_02954 8.7e-59 K helix_turn_helix multiple antibiotic resistance protein
PNFHMCLD_02955 7.2e-101 tnpR1 L Resolvase, N terminal domain
PNFHMCLD_02957 1.6e-235 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNFHMCLD_02958 0.0 gtfC 2.4.1.5 GH13 G Glycosyl hydrolase family 70
PNFHMCLD_02959 1.2e-33
PNFHMCLD_02962 2.5e-99 soj D CobQ CobB MinD ParA nucleotide binding domain protein
PNFHMCLD_02963 9.8e-34 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PNFHMCLD_02964 7.7e-67 tnp2PF3 L Transposase
PNFHMCLD_02965 1.2e-78 S Fic/DOC family
PNFHMCLD_02966 1.5e-40
PNFHMCLD_02967 1.2e-26
PNFHMCLD_02968 0.0 L MobA MobL family protein
PNFHMCLD_02969 4.3e-108 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PNFHMCLD_02970 1.5e-80 tnp2PF3 L Transposase DDE domain
PNFHMCLD_02971 1.2e-57 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PNFHMCLD_02972 2.9e-66 tnp2PF3 L Transposase
PNFHMCLD_02973 9.8e-34 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PNFHMCLD_02974 1.9e-141 L Transposase
PNFHMCLD_02976 3.1e-147 D CobQ CobB MinD ParA nucleotide binding domain protein
PNFHMCLD_02978 2.1e-173 repA S Replication initiator protein A
PNFHMCLD_02979 5.2e-27
PNFHMCLD_02980 5.4e-27 S protein conserved in bacteria
PNFHMCLD_02981 3.6e-37
PNFHMCLD_02982 2.6e-24
PNFHMCLD_02983 0.0 traA L MobA MobL family protein
PNFHMCLD_02984 3.1e-50
PNFHMCLD_02985 1.4e-57
PNFHMCLD_02986 0.0 O Belongs to the peptidase S8 family
PNFHMCLD_02987 4.2e-57
PNFHMCLD_02988 4.4e-120 L Transposase and inactivated derivatives, IS30 family
PNFHMCLD_02990 4.5e-219 L Transposase
PNFHMCLD_02991 6.9e-08 M Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
PNFHMCLD_02992 2.5e-100 icaA GT2 M Glycosyltransferases, probably involved in cell wall biogenesis
PNFHMCLD_02994 3.6e-67 icaB G deacetylase
PNFHMCLD_02995 4.6e-63
PNFHMCLD_02996 3.3e-155 L Integrase core domain
PNFHMCLD_02997 9.8e-39 L Transposase and inactivated derivatives
PNFHMCLD_02998 1.1e-54 L recombinase activity
PNFHMCLD_02999 0.0 L Transposase
PNFHMCLD_03000 1.2e-61 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PNFHMCLD_03001 7.3e-224 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
PNFHMCLD_03002 7.2e-100 tnp L DDE domain
PNFHMCLD_03003 8.4e-70 nrdI F NrdI Flavodoxin like
PNFHMCLD_03004 6.9e-198 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PNFHMCLD_03005 4e-206 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PNFHMCLD_03006 4.1e-159 nrdF 1.17.4.1 F Ribonucleotide reductase, small chain
PNFHMCLD_03007 9.4e-175 1.17.4.1 F Ribonucleotide reductase, small chain
PNFHMCLD_03008 1.2e-45 K Bacterial regulatory proteins, tetR family
PNFHMCLD_03009 2.2e-30 tnpR1 L Resolvase, N terminal domain
PNFHMCLD_03010 6.5e-290 clcA P chloride
PNFHMCLD_03011 1.1e-193 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PNFHMCLD_03012 4.5e-76 L Transposase DDE domain
PNFHMCLD_03013 1.8e-68 L Putative transposase of IS4/5 family (DUF4096)
PNFHMCLD_03014 2.1e-160 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PNFHMCLD_03015 9.5e-107 L Resolvase, N terminal domain
PNFHMCLD_03016 1.8e-105 M Glycosyl hydrolases family 25
PNFHMCLD_03017 4.9e-54 K helix_turn_helix multiple antibiotic resistance protein
PNFHMCLD_03018 0.0 kup P Transport of potassium into the cell
PNFHMCLD_03019 6.9e-99 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PNFHMCLD_03020 1.8e-20 S FRG
PNFHMCLD_03021 2.8e-220 EGP Major facilitator Superfamily
PNFHMCLD_03022 2.4e-116 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PNFHMCLD_03023 6e-183 3.3.1.1 H adenosylhomocysteinase activity
PNFHMCLD_03024 1.8e-100 L Psort location Cytoplasmic, score
PNFHMCLD_03025 1.2e-67 tnp2PF3 L Transposase
PNFHMCLD_03026 9.8e-34 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PNFHMCLD_03027 2.8e-13 2.1.1.72 V Type I restriction modification DNA specificity domain
PNFHMCLD_03028 1.3e-67 traA L MobA MobL family protein
PNFHMCLD_03029 2e-46 traA L MobA MobL family protein
PNFHMCLD_03030 2e-49
PNFHMCLD_03031 1.9e-55
PNFHMCLD_03032 1.5e-65 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PNFHMCLD_03033 3.1e-239 asdA 4.1.1.12 E Aminotransferase class I and II
PNFHMCLD_03034 1.2e-198 aspT U Predicted Permease Membrane Region
PNFHMCLD_03035 2.1e-92
PNFHMCLD_03036 2e-49
PNFHMCLD_03037 0.0 traA L MobA/MobL family
PNFHMCLD_03038 1.6e-45 L MobA MobL family protein
PNFHMCLD_03039 5.5e-27
PNFHMCLD_03040 3.1e-41
PNFHMCLD_03041 9.6e-24 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PNFHMCLD_03042 1.1e-53 tnp2PF3 L Transposase DDE domain
PNFHMCLD_03043 2.4e-164 corA P CorA-like Mg2+ transporter protein
PNFHMCLD_03044 2.6e-61 tnp2PF3 L Transposase
PNFHMCLD_03045 9.8e-34 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PNFHMCLD_03046 4.5e-55 tnp2PF3 L manually curated
PNFHMCLD_03048 1.1e-97 soj D CobQ CobB MinD ParA nucleotide binding domain protein
PNFHMCLD_03049 4.6e-11
PNFHMCLD_03050 2.4e-175 L Transposase and inactivated derivatives, IS30 family
PNFHMCLD_03051 6.8e-189 L PFAM Integrase catalytic region
PNFHMCLD_03052 1.6e-99 gbuC E glycine betaine
PNFHMCLD_03053 5.3e-113 proW E glycine betaine
PNFHMCLD_03054 8.1e-184 gbuA 3.6.1.1, 3.6.3.32 E glycine betaine
PNFHMCLD_03055 1.2e-188 L Helix-turn-helix domain
PNFHMCLD_03056 9e-29 M Lysin motif
PNFHMCLD_03057 4.3e-102 L COG3547 Transposase and inactivated derivatives
PNFHMCLD_03059 2.9e-33 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PNFHMCLD_03060 1.5e-67 tnp2PF3 L Transposase
PNFHMCLD_03061 5.2e-273 aldA 1.2.1.21, 1.2.1.22 C Belongs to the aldehyde dehydrogenase family
PNFHMCLD_03062 2.5e-203 adhC 1.1.1.90 C Zn-dependent alcohol dehydrogenases, class III
PNFHMCLD_03063 1.3e-168 L PFAM Integrase catalytic region
PNFHMCLD_03065 5.8e-134 D Cellulose biosynthesis protein BcsQ
PNFHMCLD_03066 6.3e-96 K Primase C terminal 1 (PriCT-1)
PNFHMCLD_03067 1.5e-25 I mechanosensitive ion channel activity
PNFHMCLD_03069 2.1e-16
PNFHMCLD_03070 1.1e-124 U type IV secretory pathway VirB4
PNFHMCLD_03072 2.5e-97 M CHAP domain
PNFHMCLD_03073 3.6e-13
PNFHMCLD_03074 1.1e-34 S Protein of unknown function (DUF3102)
PNFHMCLD_03083 1.5e-42 ruvB 3.6.4.12 L four-way junction helicase activity
PNFHMCLD_03084 2.1e-13 XK27_07075 S CAAX protease self-immunity
PNFHMCLD_03085 9.2e-10
PNFHMCLD_03086 5.7e-97 L PFAM Integrase catalytic region
PNFHMCLD_03087 9.5e-52 Z012_00440 L transposase activity
PNFHMCLD_03088 3.5e-262 traI 5.99.1.2 L C-terminal repeat of topoisomerase
PNFHMCLD_03089 3.6e-33 L Protein of unknown function (DUF3991)
PNFHMCLD_03092 2.1e-127 clpB O Belongs to the ClpA ClpB family
PNFHMCLD_03095 3.9e-25 3.4.22.70 M Sortase family
PNFHMCLD_03096 5.1e-17 S by MetaGeneAnnotator
PNFHMCLD_03099 1.4e-175 L Integrase core domain
PNFHMCLD_03100 2.4e-93 tnpR1 L Resolvase, N terminal domain
PNFHMCLD_03101 2.8e-57 T Belongs to the universal stress protein A family
PNFHMCLD_03102 5.5e-252 mntH P H( )-stimulated, divalent metal cation uptake system
PNFHMCLD_03103 2.2e-38 sirR K Helix-turn-helix diphteria tox regulatory element
PNFHMCLD_03105 2.6e-16
PNFHMCLD_03106 2.3e-170 L Transposase and inactivated derivatives, IS30 family
PNFHMCLD_03107 5e-101 tnp L DDE domain
PNFHMCLD_03109 3.9e-103 soj D COG1192 ATPases involved in chromosome partitioning
PNFHMCLD_03110 5.3e-220 L Transposase
PNFHMCLD_03111 9.9e-147 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PNFHMCLD_03112 4.6e-108 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PNFHMCLD_03113 6.1e-204 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PNFHMCLD_03114 2.4e-142 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PNFHMCLD_03115 4.7e-71 rfbP M Bacterial sugar transferase
PNFHMCLD_03116 2.5e-125 epsB M biosynthesis protein
PNFHMCLD_03117 1.4e-122 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PNFHMCLD_03118 2.9e-140 ywqE 3.1.3.48 GM PHP domain protein
PNFHMCLD_03119 8.8e-95 rfbP M Bacterial sugar transferase
PNFHMCLD_03120 5.2e-143 rgpAc GT4 M Domain of unknown function (DUF1972)
PNFHMCLD_03121 1.1e-103 galE 5.1.3.2 M NAD(P)H-binding
PNFHMCLD_03122 1.7e-138 wcoF M Glycosyltransferase, group 1 family protein
PNFHMCLD_03123 9.3e-33 2.3.1.79 S Hexapeptide repeat of succinyl-transferase
PNFHMCLD_03124 2.9e-27 L An automated process has identified a potential problem with this gene model
PNFHMCLD_03125 2.1e-88 lpg2 2.4.1.337 GT4 M transferase activity, transferring glycosyl groups
PNFHMCLD_03126 7.9e-41 M Glycosyl transferase 4-like domain
PNFHMCLD_03127 5.4e-36
PNFHMCLD_03128 8.6e-95 tuaB S Polysaccharide biosynthesis protein
PNFHMCLD_03129 1e-159 ugd 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PNFHMCLD_03130 1.6e-107 L Transposase and inactivated derivatives
PNFHMCLD_03131 7.4e-149 L Integrase core domain
PNFHMCLD_03132 7.8e-39 ymbI L Transposase and inactivated derivatives
PNFHMCLD_03133 6.1e-55 L COG1484 DNA replication protein
PNFHMCLD_03134 1.7e-218 L Transposase
PNFHMCLD_03135 2.2e-244 dinF V MatE
PNFHMCLD_03136 2.4e-161 L Transposase and inactivated derivatives, IS30 family
PNFHMCLD_03139 9.9e-153 U TraM recognition site of TraD and TraG
PNFHMCLD_03141 9.7e-104 L Psort location Cytoplasmic, score
PNFHMCLD_03142 2.2e-46 KLT serine threonine protein kinase
PNFHMCLD_03143 1.6e-32
PNFHMCLD_03144 4.2e-34
PNFHMCLD_03145 1.1e-234 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
PNFHMCLD_03146 4.1e-18
PNFHMCLD_03148 3.9e-62 soj D AAA domain
PNFHMCLD_03149 5.1e-98 K Primase C terminal 1 (PriCT-1)
PNFHMCLD_03150 6.8e-26 I mechanosensitive ion channel activity
PNFHMCLD_03152 9.5e-17
PNFHMCLD_03153 5.7e-126 U type IV secretory pathway VirB4
PNFHMCLD_03155 4.3e-97 M CHAP domain
PNFHMCLD_03156 1.6e-13
PNFHMCLD_03157 1.9e-34 S Protein of unknown function (DUF3102)
PNFHMCLD_03166 3.7e-41 ruvB 3.6.4.12 L four-way junction helicase activity
PNFHMCLD_03167 2.2e-10 XK27_07075 S CAAX protease self-immunity
PNFHMCLD_03168 5.7e-97 L PFAM Integrase catalytic region
PNFHMCLD_03169 9.5e-52 Z012_00440 L transposase activity
PNFHMCLD_03170 3.5e-262 traI 5.99.1.2 L C-terminal repeat of topoisomerase
PNFHMCLD_03171 7.3e-34 L Protein of unknown function (DUF3991)
PNFHMCLD_03174 1.3e-124 clpB O Belongs to the ClpA ClpB family
PNFHMCLD_03177 1.1e-24 3.4.22.70 M Sortase family
PNFHMCLD_03178 7.1e-19 S by MetaGeneAnnotator
PNFHMCLD_03180 2e-152 L Integrase core domain
PNFHMCLD_03181 9.8e-39 L Transposase and inactivated derivatives
PNFHMCLD_03182 1.9e-107 S MobA/MobL family
PNFHMCLD_03183 1.4e-116
PNFHMCLD_03184 4e-107 L Integrase
PNFHMCLD_03185 1.4e-40 K prlF antitoxin for toxin YhaV_toxin
PNFHMCLD_03186 3.8e-57 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PNFHMCLD_03188 1.6e-196 tra L Transposase and inactivated derivatives, IS30 family
PNFHMCLD_03190 2e-27 S Protein of unknown function (DUF1093)
PNFHMCLD_03191 2.5e-25
PNFHMCLD_03192 1.4e-170 L Initiator Replication protein
PNFHMCLD_03193 4.4e-19 K Helix-turn-helix XRE-family like proteins
PNFHMCLD_03196 1.1e-21 S CAAX protease self-immunity
PNFHMCLD_03197 2.6e-67 L Integrase core domain
PNFHMCLD_03198 1.1e-76
PNFHMCLD_03199 6.2e-44 S Psort location CytoplasmicMembrane, score
PNFHMCLD_03200 3.1e-17 3.4.21.19 M Belongs to the peptidase S1B family
PNFHMCLD_03201 6.4e-42 L 4.5 Transposon and IS
PNFHMCLD_03202 4.9e-57 pemK T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PNFHMCLD_03203 4.8e-44 T Antidote-toxin recognition MazE, bacterial antitoxin

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)