ORF_ID e_value Gene_name EC_number CAZy COGs Description
LDIBBJCO_00001 1.8e-211 S Endonuclease/Exonuclease/phosphatase family
LDIBBJCO_00002 1.2e-61 rpsP J Belongs to the bacterial ribosomal protein bS16 family
LDIBBJCO_00003 1e-34 CP_0960 S Belongs to the UPF0109 family
LDIBBJCO_00004 1.9e-107 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LDIBBJCO_00005 4.5e-202 iunH1 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
LDIBBJCO_00006 7e-169 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
LDIBBJCO_00007 3.1e-20
LDIBBJCO_00008 1.1e-53 S Predicted membrane protein (DUF2207)
LDIBBJCO_00009 7.3e-157 S Predicted membrane protein (DUF2207)
LDIBBJCO_00010 3.2e-10 S Predicted membrane protein (DUF2207)
LDIBBJCO_00011 0.0 S Predicted membrane protein (DUF2207)
LDIBBJCO_00012 2.4e-88 lemA S LemA family
LDIBBJCO_00013 3.2e-17 V FtsX-like permease family
LDIBBJCO_00014 1.6e-118 V ABC transporter, ATP-binding protein
LDIBBJCO_00015 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
LDIBBJCO_00016 1e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LDIBBJCO_00017 7.6e-110
LDIBBJCO_00018 3.8e-87
LDIBBJCO_00020 2.8e-277 M LPXTG cell wall anchor motif
LDIBBJCO_00021 0.0 Q von Willebrand factor (vWF) type A domain
LDIBBJCO_00022 2.8e-81
LDIBBJCO_00025 4.4e-17 P Sodium/hydrogen exchanger family
LDIBBJCO_00026 3.3e-71 ams 2.4.1.4, 3.2.1.1, 5.4.99.16 GH13 G Alpha amylase, catalytic domain
LDIBBJCO_00027 4.4e-80 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
LDIBBJCO_00028 1.6e-42 L Transposase
LDIBBJCO_00029 1.4e-150 L IstB-like ATP binding protein
LDIBBJCO_00031 1.6e-191 G Acyltransferase family
LDIBBJCO_00032 7.2e-192 wzy S EpsG family
LDIBBJCO_00034 5.8e-188 M Glycosyltransferase like family 2
LDIBBJCO_00035 1e-212 S Polysaccharide pyruvyl transferase
LDIBBJCO_00036 5.1e-133 H Hexapeptide repeat of succinyl-transferase
LDIBBJCO_00037 8.3e-201 2.4.1.166 GT2 M Glycosyltransferase like family 2
LDIBBJCO_00038 3.4e-253 cps2J S Polysaccharide biosynthesis protein
LDIBBJCO_00039 5e-232 MA20_17390 GT4 M Glycosyl transferases group 1
LDIBBJCO_00040 2.2e-204 GT4 M Psort location Cytoplasmic, score 8.87
LDIBBJCO_00041 0.0 malL 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
LDIBBJCO_00042 6.8e-234 malE G Bacterial extracellular solute-binding protein
LDIBBJCO_00043 5.1e-254 malF G Binding-protein-dependent transport system inner membrane component
LDIBBJCO_00044 1.2e-166 malG G Binding-protein-dependent transport system inner membrane component
LDIBBJCO_00045 4.5e-146 traX S TraX protein
LDIBBJCO_00046 1.1e-194 K Psort location Cytoplasmic, score
LDIBBJCO_00047 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 M Aamy_C
LDIBBJCO_00048 0.0 dnaK O Heat shock 70 kDa protein
LDIBBJCO_00049 1e-58 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LDIBBJCO_00050 9.4e-157 dnaJ1 O DnaJ molecular chaperone homology domain
LDIBBJCO_00051 1.2e-103 hspR K transcriptional regulator, MerR family
LDIBBJCO_00052 3.1e-17 F Psort location CytoplasmicMembrane, score 10.00
LDIBBJCO_00053 1.5e-114 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
LDIBBJCO_00054 1.1e-141 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
LDIBBJCO_00055 2.3e-127 S HAD hydrolase, family IA, variant 3
LDIBBJCO_00056 1.6e-134 dedA S SNARE associated Golgi protein
LDIBBJCO_00057 5.8e-125 cpaE D bacterial-type flagellum organization
LDIBBJCO_00058 9.1e-192 cpaF U Type II IV secretion system protein
LDIBBJCO_00059 2.5e-98 U Type ii secretion system
LDIBBJCO_00060 3.1e-116 gspF NU Type II secretion system (T2SS), protein F
LDIBBJCO_00061 1.1e-41 S Protein of unknown function (DUF4244)
LDIBBJCO_00062 3.7e-58 U TadE-like protein
LDIBBJCO_00063 6.5e-54 S TIGRFAM helicase secretion neighborhood TadE-like protein
LDIBBJCO_00064 2.6e-216 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
LDIBBJCO_00065 6.5e-97 K Bacterial regulatory proteins, tetR family
LDIBBJCO_00066 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
LDIBBJCO_00067 8.7e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LDIBBJCO_00068 2.5e-110 pptA 6.3.2.14 Q 4'-phosphopantetheinyl transferase superfamily
LDIBBJCO_00069 2.8e-114 K WHG domain
LDIBBJCO_00070 7.2e-186 H Beta-ketoacyl synthase, C-terminal domain
LDIBBJCO_00071 2.9e-40 L Transposase
LDIBBJCO_00072 3.8e-279 cycA E Amino acid permease
LDIBBJCO_00073 0.0 V FtsX-like permease family
LDIBBJCO_00074 9.8e-129 V ABC transporter
LDIBBJCO_00075 2.9e-268 aroP E aromatic amino acid transport protein AroP K03293
LDIBBJCO_00076 1.3e-105 S Protein of unknown function, DUF624
LDIBBJCO_00077 6.8e-153 rafG G ABC transporter permease
LDIBBJCO_00078 3.7e-146 malC G Binding-protein-dependent transport system inner membrane component
LDIBBJCO_00079 3.7e-185 K Psort location Cytoplasmic, score
LDIBBJCO_00080 1.1e-253 amyE G Bacterial extracellular solute-binding protein
LDIBBJCO_00081 3.6e-102 G Phosphoglycerate mutase family
LDIBBJCO_00082 1.2e-59 S Protein of unknown function (DUF4235)
LDIBBJCO_00083 4.2e-92 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
LDIBBJCO_00084 1.6e-35 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
LDIBBJCO_00085 0.0 pip S YhgE Pip domain protein
LDIBBJCO_00086 7.7e-279 pip S YhgE Pip domain protein
LDIBBJCO_00087 1.8e-40
LDIBBJCO_00089 2.3e-56 XK27_04590 S NADPH-dependent FMN reductase
LDIBBJCO_00090 4.7e-16 EGP Major facilitator Superfamily
LDIBBJCO_00093 2.4e-61 S Alpha/beta hydrolase family
LDIBBJCO_00094 1.7e-188 K Helix-turn-helix XRE-family like proteins
LDIBBJCO_00095 1e-24 yxiO G Major facilitator Superfamily
LDIBBJCO_00096 9e-53 relB L RelB antitoxin
LDIBBJCO_00097 4.1e-68 T Toxic component of a toxin-antitoxin (TA) module
LDIBBJCO_00098 4.5e-115 K helix_turn_helix, mercury resistance
LDIBBJCO_00099 2.4e-237 yxiO S Vacuole effluxer Atg22 like
LDIBBJCO_00100 5.5e-197 yegV G pfkB family carbohydrate kinase
LDIBBJCO_00101 2.5e-29 rpmB J Ribosomal L28 family
LDIBBJCO_00102 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
LDIBBJCO_00103 5e-102 rsmD 2.1.1.171 L Conserved hypothetical protein 95
LDIBBJCO_00104 3.7e-179 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
LDIBBJCO_00105 3.8e-303 yegQ O Peptidase family U32 C-terminal domain
LDIBBJCO_00106 8.8e-198 yfiH Q Multi-copper polyphenol oxidoreductase laccase
LDIBBJCO_00107 8.4e-151 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
LDIBBJCO_00108 9.2e-124 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
LDIBBJCO_00109 2.4e-44 D nuclear chromosome segregation
LDIBBJCO_00110 1e-267 pepC 3.4.22.40 E Peptidase C1-like family
LDIBBJCO_00111 4.8e-218 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LDIBBJCO_00112 2.5e-236 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LDIBBJCO_00113 7.4e-124 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LDIBBJCO_00114 1.1e-239 EGP Sugar (and other) transporter
LDIBBJCO_00115 2.6e-207 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
LDIBBJCO_00116 3.8e-142 KT Transcriptional regulatory protein, C terminal
LDIBBJCO_00117 1.3e-202 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
LDIBBJCO_00118 1.2e-156 pstC P probably responsible for the translocation of the substrate across the membrane
LDIBBJCO_00119 2.3e-171 pstA P Phosphate transport system permease
LDIBBJCO_00120 2.1e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LDIBBJCO_00121 3.1e-251 pbuO S Permease family
LDIBBJCO_00122 1.7e-145 3.2.1.8 S alpha beta
LDIBBJCO_00123 1.2e-86 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LDIBBJCO_00124 9.3e-49 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
LDIBBJCO_00125 1.1e-192 T Forkhead associated domain
LDIBBJCO_00126 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
LDIBBJCO_00127 2.8e-28
LDIBBJCO_00128 1.1e-105 flgA NO SAF
LDIBBJCO_00129 4.3e-31 fmdB S Putative regulatory protein
LDIBBJCO_00130 2.6e-85 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
LDIBBJCO_00131 1.6e-134
LDIBBJCO_00132 1.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
LDIBBJCO_00136 4.1e-25 rpmG J Ribosomal protein L33
LDIBBJCO_00137 1.9e-220 murB 1.3.1.98 M Cell wall formation
LDIBBJCO_00138 1.2e-269 E aromatic amino acid transport protein AroP K03293
LDIBBJCO_00139 2.9e-59 fdxA C 4Fe-4S binding domain
LDIBBJCO_00140 6.1e-224 dapC E Aminotransferase class I and II
LDIBBJCO_00141 4.5e-236 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LDIBBJCO_00142 3.9e-21 S EamA-like transporter family
LDIBBJCO_00143 3.1e-64 S EamA-like transporter family
LDIBBJCO_00145 5.2e-22
LDIBBJCO_00146 1.4e-217 rbsR K helix_turn _helix lactose operon repressor
LDIBBJCO_00147 1.7e-243 malE G Bacterial extracellular solute-binding protein
LDIBBJCO_00148 5.5e-164 malC U Binding-protein-dependent transport system inner membrane component
LDIBBJCO_00149 8e-160 U Binding-protein-dependent transport system inner membrane component
LDIBBJCO_00150 3.1e-244 bglA 3.2.1.21 G Glycosyl hydrolase family 1
LDIBBJCO_00151 1.8e-117 M Bacterial capsule synthesis protein PGA_cap
LDIBBJCO_00152 3.1e-184 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LDIBBJCO_00153 3.4e-112 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
LDIBBJCO_00154 8.4e-117
LDIBBJCO_00155 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
LDIBBJCO_00156 3.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LDIBBJCO_00157 3.7e-82 rpsI J Belongs to the universal ribosomal protein uS9 family
LDIBBJCO_00158 1.6e-120 F Domain of unknown function (DUF4916)
LDIBBJCO_00159 1.9e-59 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
LDIBBJCO_00160 8.8e-160 S G5
LDIBBJCO_00161 1.2e-162
LDIBBJCO_00162 6.5e-236 wcoI DM Psort location CytoplasmicMembrane, score
LDIBBJCO_00163 3.2e-69
LDIBBJCO_00164 1.9e-261 S Psort location CytoplasmicMembrane, score 9.99
LDIBBJCO_00165 1.3e-199 P Bacterial extracellular solute-binding protein
LDIBBJCO_00166 2.4e-151 U Binding-protein-dependent transport system inner membrane component
LDIBBJCO_00167 5.8e-161 U Binding-protein-dependent transport system inner membrane component
LDIBBJCO_00168 4.8e-202 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
LDIBBJCO_00169 1.3e-159 I type I phosphodiesterase nucleotide pyrophosphatase
LDIBBJCO_00172 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
LDIBBJCO_00173 3.5e-224 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
LDIBBJCO_00174 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
LDIBBJCO_00175 3.6e-144 ywiC S YwiC-like protein
LDIBBJCO_00176 4.1e-136 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
LDIBBJCO_00177 8e-51 rpsJ J Involved in the binding of tRNA to the ribosomes
LDIBBJCO_00178 8.7e-116 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LDIBBJCO_00179 3.1e-116 rplD J Forms part of the polypeptide exit tunnel
LDIBBJCO_00180 7.5e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
LDIBBJCO_00181 1.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LDIBBJCO_00182 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LDIBBJCO_00183 5.7e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LDIBBJCO_00184 1.7e-100 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LDIBBJCO_00185 2.2e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LDIBBJCO_00186 4.1e-37 rpmC J Belongs to the universal ribosomal protein uL29 family
LDIBBJCO_00187 6.4e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LDIBBJCO_00188 6.6e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LDIBBJCO_00189 1.3e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LDIBBJCO_00190 4.4e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LDIBBJCO_00191 9.2e-18 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LDIBBJCO_00192 5.5e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LDIBBJCO_00193 5.4e-95 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LDIBBJCO_00194 2.4e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LDIBBJCO_00195 6.7e-96 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LDIBBJCO_00196 7e-26 rpmD J Ribosomal protein L30p/L7e
LDIBBJCO_00197 8.1e-76 rplO J binds to the 23S rRNA
LDIBBJCO_00198 3.4e-247 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
LDIBBJCO_00199 2.2e-99 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
LDIBBJCO_00200 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LDIBBJCO_00201 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
LDIBBJCO_00202 9.5e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LDIBBJCO_00203 1.5e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LDIBBJCO_00204 3.4e-183 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LDIBBJCO_00205 4.4e-57 rplQ J Ribosomal protein L17
LDIBBJCO_00206 8.7e-170 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
LDIBBJCO_00207 0.0 gcs2 S A circularly permuted ATPgrasp
LDIBBJCO_00208 3.9e-150 E Transglutaminase/protease-like homologues
LDIBBJCO_00210 3.2e-99 K helix_turn _helix lactose operon repressor
LDIBBJCO_00211 3.4e-124
LDIBBJCO_00212 7.7e-186 nusA K Participates in both transcription termination and antitermination
LDIBBJCO_00213 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LDIBBJCO_00214 4.8e-82 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LDIBBJCO_00215 6.6e-218 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LDIBBJCO_00216 2.1e-218 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
LDIBBJCO_00217 1.3e-258 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LDIBBJCO_00218 1.6e-98
LDIBBJCO_00220 9.1e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LDIBBJCO_00221 3.3e-171 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LDIBBJCO_00222 1.4e-278 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LDIBBJCO_00223 3.6e-73 K Transcriptional regulator
LDIBBJCO_00224 2.2e-196 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
LDIBBJCO_00225 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
LDIBBJCO_00226 0.0 crr 2.7.1.193 G pts system, glucose-specific IIABC component
LDIBBJCO_00227 2.9e-162 arbG K CAT RNA binding domain
LDIBBJCO_00228 3e-207 I Diacylglycerol kinase catalytic domain
LDIBBJCO_00229 3.2e-242 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LDIBBJCO_00231 5.5e-250 G Bacterial extracellular solute-binding protein
LDIBBJCO_00232 9e-173 malC G Binding-protein-dependent transport system inner membrane component
LDIBBJCO_00233 2.5e-167 G ABC transporter permease
LDIBBJCO_00234 9.4e-261 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
LDIBBJCO_00236 6.2e-48 S LPXTG-motif cell wall anchor domain protein
LDIBBJCO_00237 4.3e-211 ugpC E Belongs to the ABC transporter superfamily
LDIBBJCO_00238 1.8e-136 K UTRA domain
LDIBBJCO_00239 4.9e-241 ulaA 2.7.1.194 S PTS system sugar-specific permease component
LDIBBJCO_00240 1.4e-44 ulaB 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
LDIBBJCO_00241 2.1e-73 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LDIBBJCO_00242 3.6e-221 2.4.1.166 GT2 M Glycosyltransferase like family 2
LDIBBJCO_00243 1.3e-190 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LDIBBJCO_00245 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LDIBBJCO_00246 6e-88 nrdI F Probably involved in ribonucleotide reductase function
LDIBBJCO_00247 7e-43 nrdH O Glutaredoxin
LDIBBJCO_00248 2.8e-122 S Psort location CytoplasmicMembrane, score
LDIBBJCO_00249 0.0 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
LDIBBJCO_00250 8.5e-119 K Helix-turn-helix XRE-family like proteins
LDIBBJCO_00251 2.5e-27 T LytTr DNA-binding domain
LDIBBJCO_00252 8.8e-34 T LytTr DNA-binding domain
LDIBBJCO_00253 0.0 3.2.1.21 GH3 G Fibronectin type III-like domain
LDIBBJCO_00254 0.0 KLT Protein tyrosine kinase
LDIBBJCO_00255 3e-136 O Thioredoxin
LDIBBJCO_00257 1.3e-215 S G5
LDIBBJCO_00258 1.9e-167 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
LDIBBJCO_00259 1.5e-177 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
LDIBBJCO_00260 4.8e-111 S LytR cell envelope-related transcriptional attenuator
LDIBBJCO_00261 3.2e-283 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
LDIBBJCO_00262 2.8e-166 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
LDIBBJCO_00263 0.0
LDIBBJCO_00264 0.0 murJ KLT MviN-like protein
LDIBBJCO_00265 3.1e-176 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
LDIBBJCO_00266 2.3e-221 parB K Belongs to the ParB family
LDIBBJCO_00267 1.1e-173 parA D CobQ CobB MinD ParA nucleotide binding domain protein
LDIBBJCO_00268 1.5e-123 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
LDIBBJCO_00269 1.5e-92 jag S Putative single-stranded nucleic acids-binding domain
LDIBBJCO_00270 1.7e-182 yidC U Membrane protein insertase, YidC Oxa1 family
LDIBBJCO_00271 2.9e-57 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
LDIBBJCO_00272 2.6e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
LDIBBJCO_00273 3.3e-280 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LDIBBJCO_00274 1.9e-206 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
LDIBBJCO_00275 7.1e-201 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LDIBBJCO_00276 4.2e-83 S Protein of unknown function (DUF721)
LDIBBJCO_00277 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LDIBBJCO_00278 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LDIBBJCO_00279 3.2e-50 S Transmembrane domain of unknown function (DUF3566)
LDIBBJCO_00280 5.8e-183 lacR K Transcriptional regulator, LacI family
LDIBBJCO_00281 1.3e-15 lacS G Psort location CytoplasmicMembrane, score 10.00
LDIBBJCO_00282 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
LDIBBJCO_00283 7.8e-206 V VanZ like family
LDIBBJCO_00284 4.3e-258 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
LDIBBJCO_00285 7e-197 S Psort location CytoplasmicMembrane, score
LDIBBJCO_00288 1.3e-122 S Protein of unknown function DUF45
LDIBBJCO_00290 3.6e-257 S Domain of unknown function (DUF4143)
LDIBBJCO_00291 7.2e-117 L Transposase and inactivated derivatives IS30 family
LDIBBJCO_00292 1.1e-88 amyE G Bacterial extracellular solute-binding protein
LDIBBJCO_00293 1e-114 S Protein of unknown function, DUF624
LDIBBJCO_00294 3.8e-201 K Periplasmic binding protein domain
LDIBBJCO_00295 2.1e-292 3.2.1.26 GH32 G Glycosyl hydrolases family 32
LDIBBJCO_00296 5.9e-252 amyE G Bacterial extracellular solute-binding protein
LDIBBJCO_00297 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
LDIBBJCO_00298 3e-187 K Psort location Cytoplasmic, score
LDIBBJCO_00299 4.5e-213 L Transposase and inactivated derivatives IS30 family
LDIBBJCO_00300 1e-147 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
LDIBBJCO_00301 4.1e-52 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
LDIBBJCO_00302 7e-75 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
LDIBBJCO_00303 5.8e-152 rafG G ABC transporter permease
LDIBBJCO_00304 4.2e-150 malC G Binding-protein-dependent transport system inner membrane component
LDIBBJCO_00305 9e-11 K Psort location Cytoplasmic, score
LDIBBJCO_00306 1.5e-30 K Psort location Cytoplasmic, score
LDIBBJCO_00307 6.9e-72 K Psort location Cytoplasmic, score
LDIBBJCO_00308 2e-76 amyE G Bacterial extracellular solute-binding protein
LDIBBJCO_00309 4.8e-116 amyE G Bacterial extracellular solute-binding protein
LDIBBJCO_00311 5.9e-229 M Protein of unknown function (DUF2961)
LDIBBJCO_00312 3e-254 amyE G Bacterial extracellular solute-binding protein
LDIBBJCO_00313 8.9e-187 K Periplasmic binding protein-like domain
LDIBBJCO_00314 1.5e-266 amyE G Bacterial extracellular solute-binding protein
LDIBBJCO_00315 3.6e-82 dps P Belongs to the Dps family
LDIBBJCO_00316 2.9e-230 ytfL P Transporter associated domain
LDIBBJCO_00317 7.2e-206 S AAA ATPase domain
LDIBBJCO_00318 4e-119 cah 4.2.1.1 P Reversible hydration of carbon dioxide
LDIBBJCO_00319 1e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
LDIBBJCO_00320 0.0 trxB2 1.8.1.9 C Thioredoxin domain
LDIBBJCO_00321 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
LDIBBJCO_00322 1.4e-162
LDIBBJCO_00323 8.2e-103 S Uncharacterised protein conserved in bacteria (DUF2194)
LDIBBJCO_00324 1.1e-209 S Uncharacterised protein conserved in bacteria (DUF2194)
LDIBBJCO_00325 7.2e-280 pelF GT4 M Domain of unknown function (DUF3492)
LDIBBJCO_00326 9e-284 pelG S Putative exopolysaccharide Exporter (EPS-E)
LDIBBJCO_00327 0.0 cotH M CotH kinase protein
LDIBBJCO_00328 5e-156 P VTC domain
LDIBBJCO_00329 8.5e-111 S Domain of unknown function (DUF4956)
LDIBBJCO_00330 0.0 yliE T Putative diguanylate phosphodiesterase
LDIBBJCO_00331 3.8e-125 S AAA domain
LDIBBJCO_00332 2.3e-311 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
LDIBBJCO_00333 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
LDIBBJCO_00334 0.0 yjjP S Threonine/Serine exporter, ThrE
LDIBBJCO_00335 2.8e-299 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LDIBBJCO_00336 1.3e-166 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
LDIBBJCO_00337 4.3e-297 S Amidohydrolase family
LDIBBJCO_00338 5.5e-203 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
LDIBBJCO_00339 2.1e-40 S Protein of unknown function (DUF3073)
LDIBBJCO_00340 2.7e-112 K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
LDIBBJCO_00341 2.4e-209 2.7.13.3 T Histidine kinase
LDIBBJCO_00342 2.2e-220 EGP Major Facilitator Superfamily
LDIBBJCO_00343 1.1e-71 I Sterol carrier protein
LDIBBJCO_00344 5.8e-168 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
LDIBBJCO_00345 1.2e-13 EGP Transmembrane secretion effector
LDIBBJCO_00346 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
LDIBBJCO_00347 5.9e-12
LDIBBJCO_00348 1.7e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
LDIBBJCO_00349 7.4e-110 papP E Binding-protein-dependent transport system inner membrane component
LDIBBJCO_00350 1.2e-118 E Binding-protein-dependent transport system inner membrane component
LDIBBJCO_00351 7.6e-138 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
LDIBBJCO_00352 9.6e-155 cjaA ET Bacterial periplasmic substrate-binding proteins
LDIBBJCO_00353 1.2e-146 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LDIBBJCO_00354 4.1e-294 pip 3.4.11.5 S alpha/beta hydrolase fold
LDIBBJCO_00355 0.0 tcsS2 T Histidine kinase
LDIBBJCO_00356 4.5e-141 K helix_turn_helix, Lux Regulon
LDIBBJCO_00357 0.0 MV MacB-like periplasmic core domain
LDIBBJCO_00358 1.4e-170 V ABC transporter, ATP-binding protein
LDIBBJCO_00359 4.5e-252 metY 2.5.1.49 E Aminotransferase class-V
LDIBBJCO_00360 2.8e-165 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
LDIBBJCO_00361 1.6e-23 L Transposase and inactivated derivatives IS30 family
LDIBBJCO_00362 3.7e-75 yraN L Belongs to the UPF0102 family
LDIBBJCO_00363 1.6e-288 comM O Magnesium chelatase, subunit ChlI C-terminal
LDIBBJCO_00364 0.0 dprA 5.99.1.2 LU DNA recombination-mediator protein A
LDIBBJCO_00365 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
LDIBBJCO_00366 2.1e-182 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
LDIBBJCO_00367 3.8e-114 safC S O-methyltransferase
LDIBBJCO_00368 1.6e-168 fmt2 3.2.2.10 S Belongs to the LOG family
LDIBBJCO_00369 1.1e-237 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LDIBBJCO_00370 5.1e-242 patB 4.4.1.8 E Aminotransferase, class I II
LDIBBJCO_00373 2.1e-252 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LDIBBJCO_00374 1.1e-121 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LDIBBJCO_00375 6.5e-116 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LDIBBJCO_00376 2e-59
LDIBBJCO_00377 1.7e-244 clcA_2 P Voltage gated chloride channel
LDIBBJCO_00378 2.2e-233 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
LDIBBJCO_00379 4.5e-252 rnd 3.1.13.5 J 3'-5' exonuclease
LDIBBJCO_00380 8.3e-119 S Protein of unknown function (DUF3000)
LDIBBJCO_00381 8.7e-175 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LDIBBJCO_00382 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
LDIBBJCO_00383 2.6e-38
LDIBBJCO_00384 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LDIBBJCO_00385 1.1e-225 S Peptidase dimerisation domain
LDIBBJCO_00386 7.4e-113 metI P Binding-protein-dependent transport system inner membrane component
LDIBBJCO_00387 1.4e-220 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LDIBBJCO_00388 1.6e-177 metQ P NLPA lipoprotein
LDIBBJCO_00389 6.2e-157 S Sucrose-6F-phosphate phosphohydrolase
LDIBBJCO_00392 5.9e-134 3.1.3.85 G Phosphoglycerate mutase family
LDIBBJCO_00393 6.5e-66 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
LDIBBJCO_00394 1.7e-262 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LDIBBJCO_00395 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
LDIBBJCO_00396 1.3e-301 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
LDIBBJCO_00397 0.0 XK27_09800 I Psort location CytoplasmicMembrane, score 9.99
LDIBBJCO_00398 3.2e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LDIBBJCO_00400 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
LDIBBJCO_00401 1.7e-232 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LDIBBJCO_00402 1.5e-255 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
LDIBBJCO_00403 1.9e-214 ykiI
LDIBBJCO_00404 4.8e-108
LDIBBJCO_00405 6.6e-187 L Helix-turn-helix domain
LDIBBJCO_00406 3.1e-104 L Resolvase, N terminal domain
LDIBBJCO_00408 1e-160 L Phage integrase family
LDIBBJCO_00409 9e-62
LDIBBJCO_00410 1e-58
LDIBBJCO_00411 1.4e-78 S Protein of unknown function (DUF3644)
LDIBBJCO_00412 9.9e-12 K Helix-turn-helix XRE-family like proteins
LDIBBJCO_00413 9.3e-29 K Cro/C1-type HTH DNA-binding domain
LDIBBJCO_00418 2.4e-26
LDIBBJCO_00420 8.5e-08
LDIBBJCO_00423 7.3e-59 EGP Major Facilitator Superfamily
LDIBBJCO_00424 6.2e-307 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
LDIBBJCO_00425 1.2e-79 XK27_10430 S NAD(P)H-binding
LDIBBJCO_00426 9.8e-55 ydeP K HxlR-like helix-turn-helix
LDIBBJCO_00427 2.2e-135 yoaK S Protein of unknown function (DUF1275)
LDIBBJCO_00428 4.7e-69
LDIBBJCO_00431 2.9e-295 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LDIBBJCO_00433 2.4e-160 S Protein of unknown function (DUF805)
LDIBBJCO_00434 5e-234 3.1.1.31 G Lactonase, 7-bladed beta-propeller
LDIBBJCO_00435 2.2e-118
LDIBBJCO_00436 1.7e-122 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
LDIBBJCO_00437 9.7e-248 EGP Major facilitator Superfamily
LDIBBJCO_00438 8.4e-96 S GtrA-like protein
LDIBBJCO_00439 3.3e-61 S Macrophage migration inhibitory factor (MIF)
LDIBBJCO_00440 1.8e-289 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
LDIBBJCO_00441 0.0 pepD E Peptidase family C69
LDIBBJCO_00442 2.5e-106 S Phosphatidylethanolamine-binding protein
LDIBBJCO_00443 1.9e-18 D nuclear chromosome segregation
LDIBBJCO_00444 6.5e-31 3.4.17.14 M domain, Protein
LDIBBJCO_00445 3.2e-295 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LDIBBJCO_00447 3.3e-37 ptsH G PTS HPr component phosphorylation site
LDIBBJCO_00448 5.2e-105 K helix_turn _helix lactose operon repressor
LDIBBJCO_00449 3.9e-207 holB 2.7.7.7 L DNA polymerase III
LDIBBJCO_00450 1.6e-115 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LDIBBJCO_00451 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LDIBBJCO_00452 3.7e-170 3.6.1.27 I PAP2 superfamily
LDIBBJCO_00453 3.2e-68 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
LDIBBJCO_00454 4.7e-56 L IstB-like ATP binding protein
LDIBBJCO_00455 1.2e-08 L IstB-like ATP binding protein
LDIBBJCO_00456 6.9e-158 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
LDIBBJCO_00457 3.1e-181 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
LDIBBJCO_00458 5e-125 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LDIBBJCO_00459 3.4e-28
LDIBBJCO_00460 3.6e-218 MA20_36090 S Psort location Cytoplasmic, score 8.87
LDIBBJCO_00461 9.4e-172 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
LDIBBJCO_00462 9.4e-123 3.8.1.2 S Haloacid dehalogenase-like hydrolase
LDIBBJCO_00463 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LDIBBJCO_00464 1.1e-300 ybiT S ABC transporter
LDIBBJCO_00465 1.4e-130 S Enoyl-(Acyl carrier protein) reductase
LDIBBJCO_00466 5.2e-56 P ABC transporter
LDIBBJCO_00467 8.3e-59 P ABC transporter
LDIBBJCO_00468 3.6e-50 XK26_04485 P Cobalt transport protein
LDIBBJCO_00469 3.8e-32 XK26_04485 P Cobalt transport protein
LDIBBJCO_00470 5e-234 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
LDIBBJCO_00471 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
LDIBBJCO_00472 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
LDIBBJCO_00473 3.3e-191 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
LDIBBJCO_00474 2.6e-180 rapZ S Displays ATPase and GTPase activities
LDIBBJCO_00475 3.5e-169 whiA K May be required for sporulation
LDIBBJCO_00476 6e-219 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
LDIBBJCO_00477 3.5e-146 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
LDIBBJCO_00478 2.5e-34 secG U Preprotein translocase SecG subunit
LDIBBJCO_00479 1.7e-176 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
LDIBBJCO_00480 3.2e-158 S Sucrose-6F-phosphate phosphohydrolase
LDIBBJCO_00481 1.2e-299 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
LDIBBJCO_00482 3.2e-188
LDIBBJCO_00483 3.8e-238 brnQ U Component of the transport system for branched-chain amino acids
LDIBBJCO_00484 3.6e-202 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LDIBBJCO_00485 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
LDIBBJCO_00486 3.7e-191 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
LDIBBJCO_00487 6.8e-212 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
LDIBBJCO_00488 6.2e-156 G Fructosamine kinase
LDIBBJCO_00489 1.8e-156 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
LDIBBJCO_00490 8.8e-134 S PAC2 family
LDIBBJCO_00495 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LDIBBJCO_00496 7.7e-111 hit 2.7.7.53 FG HIT domain
LDIBBJCO_00497 2e-111 yebC K transcriptional regulatory protein
LDIBBJCO_00498 2.7e-100 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
LDIBBJCO_00499 3.2e-107 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
LDIBBJCO_00500 9.4e-200 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
LDIBBJCO_00501 1.2e-52 yajC U Preprotein translocase subunit
LDIBBJCO_00502 2.7e-100 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LDIBBJCO_00503 6.9e-223 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
LDIBBJCO_00504 1.4e-164 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LDIBBJCO_00505 1.2e-228
LDIBBJCO_00506 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
LDIBBJCO_00507 4.8e-32
LDIBBJCO_00508 2.9e-120 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
LDIBBJCO_00509 1.2e-143 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
LDIBBJCO_00510 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
LDIBBJCO_00512 3.9e-164 supH S Sucrose-6F-phosphate phosphohydrolase
LDIBBJCO_00513 4.8e-290 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
LDIBBJCO_00514 0.0 pafB K WYL domain
LDIBBJCO_00515 6.8e-53
LDIBBJCO_00516 0.0 helY L DEAD DEAH box helicase
LDIBBJCO_00517 5.1e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
LDIBBJCO_00518 5.7e-140 pgp 3.1.3.18 S HAD-hyrolase-like
LDIBBJCO_00519 4.7e-37
LDIBBJCO_00520 4.9e-64
LDIBBJCO_00521 3.2e-110 K helix_turn_helix, mercury resistance
LDIBBJCO_00522 6.7e-75 garA T Inner membrane component of T3SS, cytoplasmic domain
LDIBBJCO_00523 4.2e-139 S Bacterial protein of unknown function (DUF881)
LDIBBJCO_00524 3.9e-35 sbp S Protein of unknown function (DUF1290)
LDIBBJCO_00525 1.7e-171 S Bacterial protein of unknown function (DUF881)
LDIBBJCO_00526 1.2e-106 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LDIBBJCO_00527 7.9e-157 hisG 2.4.2.17 F ATP phosphoribosyltransferase
LDIBBJCO_00528 9.9e-42 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
LDIBBJCO_00529 9.4e-113 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
LDIBBJCO_00530 3.1e-186 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LDIBBJCO_00531 2.1e-160 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
LDIBBJCO_00532 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
LDIBBJCO_00533 1.2e-131 S SOS response associated peptidase (SRAP)
LDIBBJCO_00534 1.4e-156 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
LDIBBJCO_00535 1.1e-259 mmuP E amino acid
LDIBBJCO_00536 1.9e-50 EGP Major facilitator Superfamily
LDIBBJCO_00537 5.5e-189 V VanZ like family
LDIBBJCO_00538 1.8e-65 cefD 5.1.1.17 E Aminotransferase, class V
LDIBBJCO_00539 3.3e-100 S Acetyltransferase (GNAT) domain
LDIBBJCO_00540 1.5e-50
LDIBBJCO_00541 5.2e-121
LDIBBJCO_00544 2e-35 2.7.13.3 T Histidine kinase
LDIBBJCO_00545 1.1e-193 2.7.13.3 T Histidine kinase
LDIBBJCO_00546 5.3e-127 K helix_turn_helix, Lux Regulon
LDIBBJCO_00547 3e-95
LDIBBJCO_00548 2.8e-144 M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LDIBBJCO_00549 5.4e-92 lolD Q ATPases associated with a variety of cellular activities
LDIBBJCO_00550 1.5e-177 V MacB-like periplasmic core domain
LDIBBJCO_00551 3.2e-40 relB L RelB antitoxin
LDIBBJCO_00552 3.8e-50 S Bacterial toxin of type II toxin-antitoxin system, YafQ
LDIBBJCO_00553 8.4e-26 2.7.13.3 T Histidine kinase
LDIBBJCO_00554 7.8e-97 rpoE4 K Sigma-70 region 2
LDIBBJCO_00555 7.5e-19 S Psort location CytoplasmicMembrane, score
LDIBBJCO_00556 8.4e-42 EGP Major Facilitator Superfamily
LDIBBJCO_00557 0.0 1.3.3.6, 2.3.1.39 IQ [acyl-carrier-protein] S-malonyltransferase activity
LDIBBJCO_00558 1.6e-64 H Beta-ketoacyl synthase, C-terminal domain
LDIBBJCO_00559 7e-62 hemN H Involved in the biosynthesis of porphyrin-containing compound
LDIBBJCO_00561 1e-190 K helix_turn _helix lactose operon repressor
LDIBBJCO_00562 8.7e-24 K purine nucleotide biosynthetic process
LDIBBJCO_00563 1.6e-38 K helix_turn _helix lactose operon repressor
LDIBBJCO_00564 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
LDIBBJCO_00565 2.4e-305 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
LDIBBJCO_00567 2e-43
LDIBBJCO_00568 2e-61 K helix_turn_helix, Lux Regulon
LDIBBJCO_00569 3.4e-59 2.7.13.3 T Histidine kinase
LDIBBJCO_00571 0.0 E ABC transporter, substrate-binding protein, family 5
LDIBBJCO_00572 0.0 S Glycosyl hydrolases related to GH101 family, GH129
LDIBBJCO_00573 5.9e-82
LDIBBJCO_00574 1.5e-244 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
LDIBBJCO_00575 5.8e-160 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
LDIBBJCO_00576 6.9e-161 S Sucrose-6F-phosphate phosphohydrolase
LDIBBJCO_00577 8.2e-09 S Psort location Cytoplasmic, score 8.87
LDIBBJCO_00578 1.3e-80 L Phage integrase family
LDIBBJCO_00580 0.0 4.2.1.53 S MCRA family
LDIBBJCO_00581 8.7e-167 dkgA 1.1.1.346 C Aldo/keto reductase family
LDIBBJCO_00582 3.7e-38 yneG S Domain of unknown function (DUF4186)
LDIBBJCO_00583 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
LDIBBJCO_00584 3.8e-201 K WYL domain
LDIBBJCO_00585 9e-178 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
LDIBBJCO_00586 5.4e-90 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LDIBBJCO_00587 5.3e-22 tccB2 V DivIVA protein
LDIBBJCO_00588 4.9e-45 yggT S YGGT family
LDIBBJCO_00589 1.1e-67 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
LDIBBJCO_00590 1.2e-211 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LDIBBJCO_00591 5.7e-249 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LDIBBJCO_00592 6.7e-297 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
LDIBBJCO_00593 9.1e-154 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
LDIBBJCO_00594 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
LDIBBJCO_00595 7.6e-230 O AAA domain (Cdc48 subfamily)
LDIBBJCO_00596 4.6e-146 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
LDIBBJCO_00597 5.6e-62 S Thiamine-binding protein
LDIBBJCO_00598 7.1e-248 ydjK G Sugar (and other) transporter
LDIBBJCO_00599 1.5e-213 2.7.13.3 T Histidine kinase
LDIBBJCO_00600 3.9e-122 K helix_turn_helix, Lux Regulon
LDIBBJCO_00601 1.3e-190
LDIBBJCO_00602 8.4e-260 O SERine Proteinase INhibitors
LDIBBJCO_00603 1.8e-195 K helix_turn _helix lactose operon repressor
LDIBBJCO_00604 6.2e-241 lacY P LacY proton/sugar symporter
LDIBBJCO_00605 3e-303 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
LDIBBJCO_00606 3.2e-141 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
LDIBBJCO_00607 2.5e-149 C Putative TM nitroreductase
LDIBBJCO_00608 6.4e-198 S Glycosyltransferase, group 2 family protein
LDIBBJCO_00609 1.3e-93 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
LDIBBJCO_00610 0.0 ecfA GP ABC transporter, ATP-binding protein
LDIBBJCO_00611 3.1e-47 yhbY J CRS1_YhbY
LDIBBJCO_00612 1.9e-54 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
LDIBBJCO_00613 9e-52
LDIBBJCO_00614 3.8e-187 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
LDIBBJCO_00615 3.8e-252 EGP Major facilitator Superfamily
LDIBBJCO_00616 5e-20 mtrB 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
LDIBBJCO_00618 6.9e-110 rarA L Recombination factor protein RarA
LDIBBJCO_00619 0.0 helY L DEAD DEAH box helicase
LDIBBJCO_00620 8.1e-199 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
LDIBBJCO_00622 4.9e-287 ydfD EK Alanine-glyoxylate amino-transferase
LDIBBJCO_00623 8.7e-111 argO S LysE type translocator
LDIBBJCO_00624 3.4e-291 phoN I PAP2 superfamily
LDIBBJCO_00625 1.2e-194 gluD E Binding-protein-dependent transport system inner membrane component
LDIBBJCO_00626 1.2e-110 gluC E Binding-protein-dependent transport system inner membrane component
LDIBBJCO_00627 5.3e-147 gluB ET Belongs to the bacterial solute-binding protein 3 family
LDIBBJCO_00628 1.2e-152 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
LDIBBJCO_00629 2e-100 S Aminoacyl-tRNA editing domain
LDIBBJCO_00630 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
LDIBBJCO_00631 5.9e-261 hisS 6.1.1.21 J Histidyl-tRNA synthetase
LDIBBJCO_00632 1.3e-223 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
LDIBBJCO_00633 0.0 3.1.3.5 F 5'-nucleotidase, C-terminal domain
LDIBBJCO_00634 9.6e-59 lipA I Hydrolase, alpha beta domain protein
LDIBBJCO_00635 3e-132 xylE U Sugar (and other) transporter
LDIBBJCO_00636 3e-26 K helix_turn_helix, arabinose operon control protein
LDIBBJCO_00637 0.0 clpC O ATPase family associated with various cellular activities (AAA)
LDIBBJCO_00638 1.4e-178 uspA T Belongs to the universal stress protein A family
LDIBBJCO_00639 3.7e-180 S Protein of unknown function (DUF3027)
LDIBBJCO_00640 1.5e-65 cspB K 'Cold-shock' DNA-binding domain
LDIBBJCO_00641 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
LDIBBJCO_00642 2e-132 KT Response regulator receiver domain protein
LDIBBJCO_00643 5.1e-100
LDIBBJCO_00644 4.2e-33 S Proteins of 100 residues with WXG
LDIBBJCO_00645 2.7e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
LDIBBJCO_00646 6.1e-38 K 'Cold-shock' DNA-binding domain
LDIBBJCO_00647 2.6e-83 S LytR cell envelope-related transcriptional attenuator
LDIBBJCO_00648 3.8e-133 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LDIBBJCO_00649 1.4e-187 moxR S ATPase family associated with various cellular activities (AAA)
LDIBBJCO_00650 2.8e-163 S Protein of unknown function DUF58
LDIBBJCO_00651 3.9e-85
LDIBBJCO_00652 1.1e-189 S von Willebrand factor (vWF) type A domain
LDIBBJCO_00653 1e-153 S von Willebrand factor (vWF) type A domain
LDIBBJCO_00654 3.1e-56
LDIBBJCO_00655 1.2e-254 S PGAP1-like protein
LDIBBJCO_00656 1.3e-111 ykoE S ABC-type cobalt transport system, permease component
LDIBBJCO_00657 3.3e-280 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
LDIBBJCO_00658 0.0 S Lysylphosphatidylglycerol synthase TM region
LDIBBJCO_00659 8.1e-42 hup L Belongs to the bacterial histone-like protein family
LDIBBJCO_00660 3.5e-285 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
LDIBBJCO_00662 8.9e-175 hisN 3.1.3.25 G Inositol monophosphatase family
LDIBBJCO_00663 0.0 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
LDIBBJCO_00664 4.7e-128 alsE 5.1.3.1 G Ribulose-phosphate 3 epimerase family
LDIBBJCO_00665 7.4e-103 3.8.1.2 S Haloacid dehalogenase-like hydrolase
LDIBBJCO_00666 1.4e-287 arc O AAA ATPase forming ring-shaped complexes
LDIBBJCO_00667 2.2e-125 apl 3.1.3.1 S SNARE associated Golgi protein
LDIBBJCO_00668 1.5e-119 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
LDIBBJCO_00669 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LDIBBJCO_00670 8.6e-133 3.8.1.2 S Haloacid dehalogenase-like hydrolase
LDIBBJCO_00671 1.8e-184 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LDIBBJCO_00672 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
LDIBBJCO_00673 4.2e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
LDIBBJCO_00674 7.2e-228 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LDIBBJCO_00675 9.3e-166 G Fic/DOC family
LDIBBJCO_00677 4.6e-35
LDIBBJCO_00678 7e-106 S phage tail tape measure protein
LDIBBJCO_00679 5e-16
LDIBBJCO_00680 1.9e-50 2.7.1.2 GK ROK family
LDIBBJCO_00681 1.9e-147 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
LDIBBJCO_00682 2.8e-243 nagA 3.5.1.25 G Amidohydrolase family
LDIBBJCO_00683 8.8e-190 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
LDIBBJCO_00684 0.0 tetP J Elongation factor G, domain IV
LDIBBJCO_00685 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
LDIBBJCO_00686 2e-129 fhaA T Protein of unknown function (DUF2662)
LDIBBJCO_00687 3.9e-74 fhaB T Inner membrane component of T3SS, cytoplasmic domain
LDIBBJCO_00688 7.7e-270 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
LDIBBJCO_00689 6.9e-279 rodA D Belongs to the SEDS family
LDIBBJCO_00690 2.7e-261 pbpA M penicillin-binding protein
LDIBBJCO_00691 1e-173 T Protein tyrosine kinase
LDIBBJCO_00692 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
LDIBBJCO_00693 2e-120 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
LDIBBJCO_00694 3.2e-228 srtA 3.4.22.70 M Sortase family
LDIBBJCO_00695 1.8e-118 S Bacterial protein of unknown function (DUF881)
LDIBBJCO_00696 2.6e-69 crgA D Involved in cell division
LDIBBJCO_00697 9.4e-122 gluP 3.4.21.105 S Rhomboid family
LDIBBJCO_00698 2.6e-35
LDIBBJCO_00699 1.2e-157 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
LDIBBJCO_00700 2.9e-217 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
LDIBBJCO_00701 1.1e-188 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
LDIBBJCO_00702 1.6e-160 ET Bacterial periplasmic substrate-binding proteins
LDIBBJCO_00703 5.3e-170 corA P CorA-like Mg2+ transporter protein
LDIBBJCO_00704 5.4e-166 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
LDIBBJCO_00705 1.2e-233 L ribosomal rna small subunit methyltransferase
LDIBBJCO_00706 2e-70 pdxH S Pfam:Pyridox_oxidase
LDIBBJCO_00707 1.8e-170 EG EamA-like transporter family
LDIBBJCO_00708 2.1e-131 C Putative TM nitroreductase
LDIBBJCO_00709 3.8e-32
LDIBBJCO_00710 8.7e-256 S Metal-independent alpha-mannosidase (GH125)
LDIBBJCO_00711 1.9e-236 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
LDIBBJCO_00712 4.5e-208 K helix_turn _helix lactose operon repressor
LDIBBJCO_00713 0.0 3.2.1.96 G Glycosyl hydrolase family 85
LDIBBJCO_00714 5.9e-213 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
LDIBBJCO_00715 1.9e-243 L Resolvase, N terminal domain
LDIBBJCO_00716 3e-228 2.7.7.7 L Transposase and inactivated derivatives
LDIBBJCO_00717 1.8e-161 ksgA 2.1.1.182, 2.1.1.184 J Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family
LDIBBJCO_00718 3.3e-108
LDIBBJCO_00719 2.9e-96 S Antirestriction protein (ArdA)
LDIBBJCO_00720 5.2e-79 L Psort location Cytoplasmic, score
LDIBBJCO_00721 1.9e-121 insK L Psort location Cytoplasmic, score
LDIBBJCO_00722 7.8e-149
LDIBBJCO_00723 2e-19
LDIBBJCO_00724 4.8e-116 S D5 N terminal like
LDIBBJCO_00725 4e-07 S Helix-turn-helix domain
LDIBBJCO_00726 1.7e-297 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
LDIBBJCO_00727 1.9e-263 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
LDIBBJCO_00728 5.2e-156 lacG G Binding-protein-dependent transport system inner membrane component
LDIBBJCO_00729 2.1e-171 malC G Binding-protein-dependent transport system inner membrane component
LDIBBJCO_00730 3e-245 srrA1 G Bacterial extracellular solute-binding protein
LDIBBJCO_00731 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
LDIBBJCO_00732 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
LDIBBJCO_00733 1.3e-51 3.2.1.24 GH38 G Alpha mannosidase, middle domain
LDIBBJCO_00734 1.3e-41 3.2.1.24 GH38 G Alpha mannosidase, middle domain
LDIBBJCO_00735 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
LDIBBJCO_00736 9.8e-138 3.2.1.24 GH38 G Alpha mannosidase, middle domain
LDIBBJCO_00737 1e-15 L Phage integrase family
LDIBBJCO_00738 7e-39
LDIBBJCO_00739 1e-171 S Fic/DOC family
LDIBBJCO_00740 5.1e-256 S HipA-like C-terminal domain
LDIBBJCO_00742 2.3e-74
LDIBBJCO_00743 6e-102 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LDIBBJCO_00744 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LDIBBJCO_00745 1.7e-84 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
LDIBBJCO_00746 1.4e-47 S Domain of unknown function (DUF4193)
LDIBBJCO_00747 2.2e-148 S Protein of unknown function (DUF3071)
LDIBBJCO_00748 5e-232 S Type I phosphodiesterase / nucleotide pyrophosphatase
LDIBBJCO_00749 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
LDIBBJCO_00751 1.8e-43 K Psort location Cytoplasmic, score
LDIBBJCO_00752 1.2e-48 K Psort location Cytoplasmic, score
LDIBBJCO_00753 0.0 lhr L DEAD DEAH box helicase
LDIBBJCO_00754 9.8e-172 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LDIBBJCO_00755 4.5e-222 G Major Facilitator Superfamily
LDIBBJCO_00756 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
LDIBBJCO_00757 8.2e-191 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
LDIBBJCO_00758 8.1e-114
LDIBBJCO_00759 8.5e-196 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
LDIBBJCO_00760 0.0 pknL 2.7.11.1 KLT PASTA
LDIBBJCO_00761 6.2e-131 plsC2 2.3.1.51 I Phosphate acyltransferases
LDIBBJCO_00762 1.2e-118
LDIBBJCO_00763 1.7e-193 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LDIBBJCO_00764 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
LDIBBJCO_00765 1.3e-111 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LDIBBJCO_00766 1.9e-101 recX S Modulates RecA activity
LDIBBJCO_00767 1.1e-196 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LDIBBJCO_00768 1.2e-31 S Protein of unknown function (DUF3046)
LDIBBJCO_00769 2.6e-78 K Helix-turn-helix XRE-family like proteins
LDIBBJCO_00770 6e-97 cinA 3.5.1.42 S Belongs to the CinA family
LDIBBJCO_00771 2.1e-117 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LDIBBJCO_00772 0.0 ftsK D FtsK SpoIIIE family protein
LDIBBJCO_00773 2.7e-150 fic D Fic/DOC family
LDIBBJCO_00774 4.8e-182 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LDIBBJCO_00775 4e-278 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LDIBBJCO_00776 5.2e-150 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
LDIBBJCO_00777 2.9e-163 ydeD EG EamA-like transporter family
LDIBBJCO_00778 1.1e-136 ybhL S Belongs to the BI1 family
LDIBBJCO_00779 1.3e-109 K helix_turn_helix, Lux Regulon
LDIBBJCO_00780 6.8e-121 E Psort location Cytoplasmic, score 8.87
LDIBBJCO_00781 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LDIBBJCO_00782 0.0 ctpE P E1-E2 ATPase
LDIBBJCO_00783 2.8e-97
LDIBBJCO_00784 9e-242 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LDIBBJCO_00785 3.8e-134 S Protein of unknown function (DUF3159)
LDIBBJCO_00786 7.3e-155 S Protein of unknown function (DUF3710)
LDIBBJCO_00787 3.3e-171 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
LDIBBJCO_00788 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
LDIBBJCO_00789 1.1e-173 dppC EP N-terminal TM domain of oligopeptide transport permease C
LDIBBJCO_00790 8.9e-154 dppB EP Binding-protein-dependent transport system inner membrane component
LDIBBJCO_00791 0.0 E ABC transporter, substrate-binding protein, family 5
LDIBBJCO_00792 2.3e-187 xerC D Belongs to the 'phage' integrase family. XerC subfamily
LDIBBJCO_00793 4.9e-148 V ABC transporter, ATP-binding protein
LDIBBJCO_00794 0.0 MV MacB-like periplasmic core domain
LDIBBJCO_00795 4.5e-42
LDIBBJCO_00796 3.2e-189 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
LDIBBJCO_00797 2e-188 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
LDIBBJCO_00798 5.2e-78
LDIBBJCO_00799 0.0 typA T Elongation factor G C-terminus
LDIBBJCO_00800 2e-106 K Virulence activator alpha C-term
LDIBBJCO_00801 4.8e-137 V ATPases associated with a variety of cellular activities
LDIBBJCO_00802 0.0 V FtsX-like permease family
LDIBBJCO_00803 5.9e-19 naiP U Sugar (and other) transporter
LDIBBJCO_00804 3.9e-240 iscS1 2.8.1.7 E Aminotransferase class-V
LDIBBJCO_00805 4.2e-161 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, N-terminal domain
LDIBBJCO_00806 5.6e-297 nadB 1.3.5.4, 1.4.3.16, 2.4.2.19 H Catalyzes the oxidation of L-aspartate to iminoaspartate
LDIBBJCO_00807 1.6e-249 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
LDIBBJCO_00808 3.4e-160 nrtR 3.6.1.55 F NUDIX hydrolase
LDIBBJCO_00809 3.1e-116 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LDIBBJCO_00810 8.5e-151 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
LDIBBJCO_00811 1.5e-151 soj D CobQ CobB MinD ParA nucleotide binding domain protein
LDIBBJCO_00812 1.9e-159 xerD D recombinase XerD
LDIBBJCO_00813 3.8e-194 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
LDIBBJCO_00814 2.3e-163 EG GntP family permease
LDIBBJCO_00815 9.3e-92 cdaR KT Putative sugar diacid recognition
LDIBBJCO_00816 1.3e-61 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LDIBBJCO_00817 6.2e-25 rpmI J Ribosomal protein L35
LDIBBJCO_00818 1.7e-113 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LDIBBJCO_00819 7.2e-135 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
LDIBBJCO_00820 1.3e-196 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
LDIBBJCO_00821 4.2e-89 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LDIBBJCO_00822 7.5e-183 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
LDIBBJCO_00823 9.4e-191 galM 5.1.3.3 G Aldose 1-epimerase
LDIBBJCO_00824 1.1e-188 galM 5.1.3.3 G Aldose 1-epimerase
LDIBBJCO_00825 3.3e-52
LDIBBJCO_00826 1.8e-136 sigH K Belongs to the sigma-70 factor family. ECF subfamily
LDIBBJCO_00827 5.6e-294 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LDIBBJCO_00828 2.6e-191 V Acetyltransferase (GNAT) domain
LDIBBJCO_00829 7.3e-68 V Acetyltransferase (GNAT) domain
LDIBBJCO_00830 0.0 smc D Required for chromosome condensation and partitioning
LDIBBJCO_00831 8.1e-304 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
LDIBBJCO_00832 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
LDIBBJCO_00833 6.6e-98 3.6.1.55 F NUDIX domain
LDIBBJCO_00834 3.8e-248 nagA 3.5.1.25 G Amidohydrolase family
LDIBBJCO_00835 2.1e-151 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
LDIBBJCO_00836 8.1e-210 GK ROK family
LDIBBJCO_00837 2.2e-165 2.7.1.2 GK ROK family
LDIBBJCO_00838 2.3e-226 GK ROK family
LDIBBJCO_00839 5.6e-169 2.7.1.4 G pfkB family carbohydrate kinase
LDIBBJCO_00840 1e-97 G Major Facilitator Superfamily
LDIBBJCO_00841 1.5e-83 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
LDIBBJCO_00842 7e-15
LDIBBJCO_00843 2.5e-173 ftsQ 6.3.2.4 D Cell division protein FtsQ
LDIBBJCO_00844 6.8e-284 murC 6.3.2.8 M Belongs to the MurCDEF family
LDIBBJCO_00845 5.9e-219 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LDIBBJCO_00846 1.5e-225 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
LDIBBJCO_00847 5.1e-273 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LDIBBJCO_00848 1.2e-205 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LDIBBJCO_00849 2.7e-242 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
LDIBBJCO_00850 2e-155 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LDIBBJCO_00851 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
LDIBBJCO_00852 1.4e-67 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
LDIBBJCO_00853 5.7e-189 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
LDIBBJCO_00854 1.3e-93 mraZ K Belongs to the MraZ family
LDIBBJCO_00855 0.0 L DNA helicase
LDIBBJCO_00856 7.5e-230 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
LDIBBJCO_00857 8.4e-78 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LDIBBJCO_00858 3e-47 M Lysin motif
LDIBBJCO_00859 6.9e-130 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LDIBBJCO_00860 1.2e-161 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LDIBBJCO_00861 1.7e-176 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
LDIBBJCO_00862 1.2e-272 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LDIBBJCO_00863 3.4e-123 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
LDIBBJCO_00864 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
LDIBBJCO_00865 2.3e-218 EGP Major facilitator Superfamily
LDIBBJCO_00866 2.1e-265 glnA2 6.3.1.2 E glutamine synthetase
LDIBBJCO_00867 2.1e-279 S Uncharacterized protein conserved in bacteria (DUF2252)
LDIBBJCO_00868 1.3e-131 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
LDIBBJCO_00869 9.1e-121 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LDIBBJCO_00870 2.3e-99
LDIBBJCO_00871 2.7e-111 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
LDIBBJCO_00872 1.3e-218 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LDIBBJCO_00873 7.3e-253 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LDIBBJCO_00874 2.4e-53 acyP 3.6.1.7 C Acylphosphatase
LDIBBJCO_00875 7.7e-157 yvgN 1.1.1.346 S Aldo/keto reductase family
LDIBBJCO_00876 0.0 2.4.1.230, 3.2.1.51 GH65,GH95 G Glycosyl hydrolase family 65, N-terminal domain
LDIBBJCO_00877 1.4e-164 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
LDIBBJCO_00878 5.1e-153 S Amidohydrolase
LDIBBJCO_00879 2.2e-145 IQ KR domain
LDIBBJCO_00880 2e-166 4.2.1.68 M Enolase C-terminal domain-like
LDIBBJCO_00881 1e-123 L Phage integrase, N-terminal SAM-like domain
LDIBBJCO_00882 5.9e-193 L Phage integrase family
LDIBBJCO_00883 7.1e-228 xerC_1 L Belongs to the 'phage' integrase family
LDIBBJCO_00884 3e-62 L HTH-like domain
LDIBBJCO_00885 1.8e-25 L Transposase
LDIBBJCO_00887 5.9e-61 pin L Resolvase, N terminal domain
LDIBBJCO_00888 4.3e-210 G Bacterial extracellular solute-binding protein
LDIBBJCO_00889 9.6e-126 P Binding-protein-dependent transport system inner membrane component
LDIBBJCO_00890 2e-128 P Binding-protein-dependent transport systems inner membrane component
LDIBBJCO_00891 4.4e-258 M Protein of unknown function (DUF2961)
LDIBBJCO_00892 7.9e-237 bfrA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
LDIBBJCO_00893 3.2e-146 K helix_turn _helix lactose operon repressor
LDIBBJCO_00894 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LDIBBJCO_00895 1.4e-158 mhpC I Alpha/beta hydrolase family
LDIBBJCO_00896 2.3e-119 L Transposase
LDIBBJCO_00897 1.9e-37 pabC 2.6.1.42, 4.1.3.38 EH Amino-transferase class IV
LDIBBJCO_00899 1.5e-291 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
LDIBBJCO_00900 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
LDIBBJCO_00901 3.3e-52 S Protein of unknown function (DUF2469)
LDIBBJCO_00902 1.1e-195 2.3.1.57 J Acetyltransferase (GNAT) domain
LDIBBJCO_00903 8.1e-282 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LDIBBJCO_00904 9.5e-286 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
LDIBBJCO_00905 4.1e-51 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LDIBBJCO_00906 3.6e-134 K Psort location Cytoplasmic, score
LDIBBJCO_00907 3.7e-180
LDIBBJCO_00908 4.2e-167 V ABC transporter
LDIBBJCO_00909 5.3e-170 spoU 2.1.1.185 J RNA methyltransferase TrmH family
LDIBBJCO_00910 3.7e-111 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LDIBBJCO_00911 1.6e-210 rmuC S RmuC family
LDIBBJCO_00912 1.3e-42 csoR S Metal-sensitive transcriptional repressor
LDIBBJCO_00913 0.0 pacS 1.9.3.1, 3.6.3.54 P E1-E2 ATPase
LDIBBJCO_00914 1.5e-124 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
LDIBBJCO_00915 8e-278 ptsP 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LDIBBJCO_00916 2.3e-38 ptsH G phosphoenolpyruvate-dependent sugar phosphotransferase system
LDIBBJCO_00918 6.6e-70 rplI J Binds to the 23S rRNA
LDIBBJCO_00919 2.6e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LDIBBJCO_00920 3.2e-62 ssb1 L Single-stranded DNA-binding protein
LDIBBJCO_00921 4.6e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
LDIBBJCO_00922 2.6e-143 D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LDIBBJCO_00923 1.1e-189 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LDIBBJCO_00924 2e-141 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LDIBBJCO_00925 4.2e-228 sca1 3.2.1.187 GH121 DG Bacterial Ig-like domain (group 4)
LDIBBJCO_00926 1.9e-61 L Integrase core domain
LDIBBJCO_00927 5.3e-184 lacR K Transcriptional regulator, LacI family
LDIBBJCO_00928 1.4e-21 L Helix-turn-helix domain
LDIBBJCO_00929 4.2e-258 G Bacterial extracellular solute-binding protein
LDIBBJCO_00930 1.1e-220 GK ROK family
LDIBBJCO_00931 2.5e-15 U Binding-protein-dependent transport system inner membrane component
LDIBBJCO_00932 0.0 G Glycosyl hydrolase family 20, domain 2
LDIBBJCO_00933 1.2e-08 L HTH-like domain
LDIBBJCO_00934 8.1e-220 vex3 V ABC transporter permease
LDIBBJCO_00935 7.2e-212 vex1 V Efflux ABC transporter, permease protein
LDIBBJCO_00936 4.1e-110 vex2 V ABC transporter, ATP-binding protein
LDIBBJCO_00937 4.5e-97 ptpA 3.1.3.48 T low molecular weight
LDIBBJCO_00938 4.6e-128 folA 1.5.1.3 H dihydrofolate reductase
LDIBBJCO_00939 1e-167 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LDIBBJCO_00940 3.4e-73 attW O OsmC-like protein
LDIBBJCO_00941 1.5e-189 T Universal stress protein family
LDIBBJCO_00942 1.5e-103 M NlpC/P60 family
LDIBBJCO_00943 2.9e-99 M NlpC/P60 family
LDIBBJCO_00944 1.7e-168 usp 3.5.1.28 CBM50 S CHAP domain
LDIBBJCO_00945 1.1e-211 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
LDIBBJCO_00946 1.8e-32
LDIBBJCO_00947 6e-174 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
LDIBBJCO_00948 5.4e-116 phoU P Plays a role in the regulation of phosphate uptake
LDIBBJCO_00949 1.1e-138 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LDIBBJCO_00950 4.7e-174 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
LDIBBJCO_00951 2.3e-309 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
LDIBBJCO_00953 3.3e-217 araJ EGP Major facilitator Superfamily
LDIBBJCO_00954 0.0 S Domain of unknown function (DUF4037)
LDIBBJCO_00955 2.9e-116 S Protein of unknown function (DUF4125)
LDIBBJCO_00956 0.0 S alpha beta
LDIBBJCO_00957 8.1e-62
LDIBBJCO_00958 2e-289 pspC KT PspC domain
LDIBBJCO_00959 1.5e-236 tcsS3 KT PspC domain
LDIBBJCO_00960 2.9e-117 degU K helix_turn_helix, Lux Regulon
LDIBBJCO_00961 7.7e-167 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
LDIBBJCO_00962 2.6e-205 mdsC 2.7.1.162, 2.7.1.39 S Phosphotransferase enzyme family
LDIBBJCO_00963 3.2e-106 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
LDIBBJCO_00964 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
LDIBBJCO_00965 5.5e-192 K helix_turn _helix lactose operon repressor
LDIBBJCO_00966 0.0 ganB 3.2.1.89 G Glycosyl hydrolase family 53
LDIBBJCO_00967 7.8e-168 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
LDIBBJCO_00968 3.2e-141 L Protein of unknown function (DUF1524)
LDIBBJCO_00969 4.6e-236 mntH P H( )-stimulated, divalent metal cation uptake system
LDIBBJCO_00970 5.7e-121 EGP Major facilitator Superfamily
LDIBBJCO_00971 3.6e-147 EGP Major facilitator Superfamily
LDIBBJCO_00972 6.2e-308 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
LDIBBJCO_00973 6.5e-223 rfbP 2.7.8.6 M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
LDIBBJCO_00974 5.7e-109 3.1.3.48 T Low molecular weight phosphatase family
LDIBBJCO_00975 2.2e-29 L Transposase
LDIBBJCO_00976 5.1e-50 K helix_turn_helix, arabinose operon control protein
LDIBBJCO_00977 2.6e-154 araN G Bacterial extracellular solute-binding protein
LDIBBJCO_00978 1.1e-119 lacF P Binding-protein-dependent transport system inner membrane component
LDIBBJCO_00979 1.3e-114 araQ U Binding-protein-dependent transport system inner membrane component
LDIBBJCO_00980 1.4e-131 rafA 3.2.1.22 G alpha-galactosidase
LDIBBJCO_00981 2.9e-51 pabC 2.6.1.42, 4.1.3.38 EH Amino-transferase class IV
LDIBBJCO_00982 2.3e-63 tyrA 5.4.99.5 E Chorismate mutase type II
LDIBBJCO_00983 0.0 S domain protein
LDIBBJCO_00984 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
LDIBBJCO_00985 9.2e-281 E Bacterial extracellular solute-binding proteins, family 5 Middle
LDIBBJCO_00986 1.3e-127 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LDIBBJCO_00987 1.2e-132 KT Transcriptional regulatory protein, C terminal
LDIBBJCO_00988 1.5e-81
LDIBBJCO_00989 3.7e-97 mntP P Probably functions as a manganese efflux pump
LDIBBJCO_00990 4e-92 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
LDIBBJCO_00991 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
LDIBBJCO_00992 0.0 K RNA polymerase II activating transcription factor binding
LDIBBJCO_00993 1.5e-53 L Helix-turn-helix domain
LDIBBJCO_00994 3.1e-42 S Sulfite exporter TauE/SafE
LDIBBJCO_00996 9e-75 S KAP family P-loop domain
LDIBBJCO_00997 2.3e-162 S KAP family P-loop domain
LDIBBJCO_00999 5.5e-55 L Transposase
LDIBBJCO_01001 1.3e-159 I type I phosphodiesterase nucleotide pyrophosphatase
LDIBBJCO_01002 4.8e-202 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
LDIBBJCO_01003 5.8e-161 U Binding-protein-dependent transport system inner membrane component
LDIBBJCO_01004 2.4e-151 U Binding-protein-dependent transport system inner membrane component
LDIBBJCO_01005 1.3e-199 P Bacterial extracellular solute-binding protein
LDIBBJCO_01006 1.2e-28 L Transposase and inactivated derivatives IS30 family
LDIBBJCO_01007 1.6e-14
LDIBBJCO_01009 1.6e-167 K Periplasmic binding protein domain
LDIBBJCO_01010 0.0 ubiB S ABC1 family
LDIBBJCO_01011 2.7e-32 S granule-associated protein
LDIBBJCO_01012 2.4e-141 cobQ S CobB/CobQ-like glutamine amidotransferase domain
LDIBBJCO_01013 1.9e-264 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
LDIBBJCO_01014 3.3e-257 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
LDIBBJCO_01015 3e-238 dinF V MatE
LDIBBJCO_01016 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
LDIBBJCO_01017 1e-54 glnB K Nitrogen regulatory protein P-II
LDIBBJCO_01018 1e-227 amt U Ammonium Transporter Family
LDIBBJCO_01019 2.2e-171 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
LDIBBJCO_01020 1e-151 icaR K Bacterial regulatory proteins, tetR family
LDIBBJCO_01021 1.1e-197 XK27_01805 M Glycosyltransferase like family 2
LDIBBJCO_01022 1.1e-302 pepD E Peptidase family C69
LDIBBJCO_01024 2.8e-292 3.5.2.6 V Beta-lactamase enzyme family
LDIBBJCO_01025 2.9e-303 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LDIBBJCO_01026 3.7e-193 opcA G Glucose-6-phosphate dehydrogenase subunit
LDIBBJCO_01027 2e-136 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
LDIBBJCO_01028 1.5e-272 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LDIBBJCO_01029 6.1e-252 S Putative ABC-transporter type IV
LDIBBJCO_01030 0.0 pip S YhgE Pip domain protein
LDIBBJCO_01031 1.8e-306 pip S YhgE Pip domain protein
LDIBBJCO_01032 9.2e-101 K Psort location Cytoplasmic, score 8.87
LDIBBJCO_01033 1.7e-67 S FMN_bind
LDIBBJCO_01034 3.8e-145 macB V ABC transporter, ATP-binding protein
LDIBBJCO_01035 1.6e-199 Z012_06715 V FtsX-like permease family
LDIBBJCO_01036 1.7e-227 macB_2 V ABC transporter permease
LDIBBJCO_01037 1.9e-231 S Predicted membrane protein (DUF2318)
LDIBBJCO_01038 2.8e-99 tpd P Fe2+ transport protein
LDIBBJCO_01039 0.0 efeU_1 P Iron permease FTR1 family
LDIBBJCO_01041 4.1e-282 L Phage integrase, N-terminal SAM-like domain
LDIBBJCO_01042 1.8e-27
LDIBBJCO_01043 0.0 T AAA domain
LDIBBJCO_01044 9.3e-283 S FRG domain
LDIBBJCO_01045 6.7e-231 dcm 2.1.1.37 L Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
LDIBBJCO_01046 1.7e-173 S Domain of unknown function (DUF4928)
LDIBBJCO_01047 4.3e-136 tnp7109-21 L Integrase core domain
LDIBBJCO_01048 3.9e-117 S ABC-2 family transporter protein
LDIBBJCO_01050 5.4e-152 L HNH endonuclease
LDIBBJCO_01051 2e-166
LDIBBJCO_01052 2.6e-91
LDIBBJCO_01053 1.5e-19 2.3.1.1 K Psort location Cytoplasmic, score 8.87
LDIBBJCO_01054 8.9e-202 3.4.22.70 M Sortase family
LDIBBJCO_01055 4.8e-69 V Abi-like protein
LDIBBJCO_01056 3.6e-193 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
LDIBBJCO_01057 1.3e-134 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
LDIBBJCO_01058 9.4e-98 askB 1.1.1.3, 2.7.2.4 E ACT domain
LDIBBJCO_01059 9e-214 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LDIBBJCO_01060 9.6e-112
LDIBBJCO_01061 6e-19 L Helix-turn-helix domain
LDIBBJCO_01062 4.2e-112 I alpha/beta hydrolase fold
LDIBBJCO_01063 5e-254 Q D-alanine [D-alanyl carrier protein] ligase activity
LDIBBJCO_01064 7.1e-113 Q D-alanine [D-alanyl carrier protein] ligase activity
LDIBBJCO_01065 2.1e-143
LDIBBJCO_01068 2.4e-08 S Protein of unknown function (DUF4230)
LDIBBJCO_01069 6.8e-102 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
LDIBBJCO_01070 1.2e-13 C Aldo/keto reductase family
LDIBBJCO_01071 2.3e-31
LDIBBJCO_01072 2.7e-299 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
LDIBBJCO_01073 4.3e-291 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LDIBBJCO_01074 1.1e-184 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
LDIBBJCO_01075 3.7e-243 purD 6.3.4.13 F Belongs to the GARS family
LDIBBJCO_01076 4.5e-299 aldH 1.2.1.3, 1.2.1.5 C Aldehyde dehydrogenase family
LDIBBJCO_01077 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
LDIBBJCO_01078 7.3e-156 P Zinc-uptake complex component A periplasmic
LDIBBJCO_01079 1.5e-98 S cobalamin synthesis protein
LDIBBJCO_01080 3.9e-29 rpmB J Ribosomal L28 family
LDIBBJCO_01081 1.4e-20 rpmG J Ribosomal protein L33
LDIBBJCO_01082 2.5e-44 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LDIBBJCO_01083 4.4e-34 rpmE2 J Ribosomal protein L31
LDIBBJCO_01084 1.1e-14 rpmJ J Ribosomal protein L36
LDIBBJCO_01085 1.3e-18 J Ribosomal L32p protein family
LDIBBJCO_01086 2.3e-25 adcA P ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
LDIBBJCO_01087 1.4e-180 ycgR S Predicted permease
LDIBBJCO_01088 7.8e-140 S TIGRFAM TIGR03943 family protein
LDIBBJCO_01089 8.7e-27 zur P Ferric uptake regulator family
LDIBBJCO_01090 6.1e-35
LDIBBJCO_01091 2.5e-44 tetR K Transcriptional regulator C-terminal region
LDIBBJCO_01092 1.2e-68 XK27_06785 V ABC transporter
LDIBBJCO_01093 2.9e-27 ylbB V FtsX-like permease family
LDIBBJCO_01094 4.4e-84 ylbB V FtsX-like permease family
LDIBBJCO_01095 1.2e-68 zur P Belongs to the Fur family
LDIBBJCO_01096 1.6e-224 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LDIBBJCO_01097 4.3e-86 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LDIBBJCO_01098 9.8e-183 adh3 C Zinc-binding dehydrogenase
LDIBBJCO_01099 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LDIBBJCO_01100 3.3e-286 macB_8 V MacB-like periplasmic core domain
LDIBBJCO_01101 1.2e-188 M Conserved repeat domain
LDIBBJCO_01102 6.2e-135 V ATPases associated with a variety of cellular activities
LDIBBJCO_01103 5.5e-86 msrA 1.8.4.11, 1.8.4.12 O peptide-methionine (S)-S-oxide reductase activity
LDIBBJCO_01104 0.0 E ABC transporter, substrate-binding protein, family 5
LDIBBJCO_01105 3.6e-15 L Psort location Cytoplasmic, score 8.87
LDIBBJCO_01106 5.3e-239 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
LDIBBJCO_01107 9.9e-225 K helix_turn _helix lactose operon repressor
LDIBBJCO_01108 5.6e-258 G Bacterial extracellular solute-binding protein
LDIBBJCO_01111 1.9e-158 K Helix-turn-helix domain, rpiR family
LDIBBJCO_01112 7e-43 G Alpha-L-arabinofuranosidase C-terminal domain
LDIBBJCO_01113 3.3e-30
LDIBBJCO_01114 8.5e-210 ybiR P Citrate transporter
LDIBBJCO_01115 3.2e-294 EK Alanine-glyoxylate amino-transferase
LDIBBJCO_01116 1.1e-115 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
LDIBBJCO_01117 2e-155 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
LDIBBJCO_01118 5.1e-34
LDIBBJCO_01119 6.9e-69 S PIN domain
LDIBBJCO_01120 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
LDIBBJCO_01121 3.1e-245 dgt 3.1.5.1 F Phosphohydrolase-associated domain
LDIBBJCO_01122 3.4e-263 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LDIBBJCO_01123 4.7e-263 yhdG E aromatic amino acid transport protein AroP K03293
LDIBBJCO_01124 1.9e-64 K Periplasmic binding proteins and sugar binding domain of LacI family
LDIBBJCO_01125 2.5e-69 K Periplasmic binding proteins and sugar binding domain of LacI family
LDIBBJCO_01126 1.6e-46 FG bis(5'-adenosyl)-triphosphatase activity
LDIBBJCO_01127 4.5e-181 uxaC 5.3.1.12 G Glucuronate isomerase
LDIBBJCO_01128 1.6e-194 mtlD 1.1.1.17, 1.1.1.57 G Mannitol dehydrogenase C-terminal domain
LDIBBJCO_01129 1.6e-233 rspA 4.2.1.8 M mandelate racemase muconate lactonizing
LDIBBJCO_01130 4.8e-64 gntK 2.7.1.12 F Shikimate kinase
LDIBBJCO_01131 1e-233 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LDIBBJCO_01132 5.6e-172 G MFS/sugar transport protein
LDIBBJCO_01133 0.0 M Belongs to the glycosyl hydrolase 30 family
LDIBBJCO_01134 2e-46
LDIBBJCO_01135 4.6e-131 U Binding-protein-dependent transport system inner membrane component
LDIBBJCO_01136 1.1e-133 U Binding-protein-dependent transport system inner membrane component
LDIBBJCO_01137 4.9e-161 G Bacterial extracellular solute-binding protein
LDIBBJCO_01138 4.1e-260 3.2.1.45 GH30 G Glycosyl hydrolase family 30 TIM-barrel domain
LDIBBJCO_01139 2.5e-243 S Uncharacterized protein conserved in bacteria (DUF2264)
LDIBBJCO_01140 4.6e-183 3.2.1.40 G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
LDIBBJCO_01141 6e-117 K helix_turn_helix, Deoxyribose operon repressor
LDIBBJCO_01142 1.3e-101 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LDIBBJCO_01143 2.7e-93 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
LDIBBJCO_01144 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
LDIBBJCO_01145 8.3e-221 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
LDIBBJCO_01146 4.8e-193 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
LDIBBJCO_01147 1.3e-137 sapF E ATPases associated with a variety of cellular activities
LDIBBJCO_01148 1.9e-136 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
LDIBBJCO_01149 1e-147 EP Binding-protein-dependent transport system inner membrane component
LDIBBJCO_01150 1.9e-167 P Binding-protein-dependent transport system inner membrane component
LDIBBJCO_01151 6.1e-291 E ABC transporter, substrate-binding protein, family 5
LDIBBJCO_01152 1.5e-143 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
LDIBBJCO_01153 1.5e-277 G Bacterial extracellular solute-binding protein
LDIBBJCO_01154 1.7e-259 G Bacterial extracellular solute-binding protein
LDIBBJCO_01155 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
LDIBBJCO_01156 3.1e-220 GK ROK family
LDIBBJCO_01157 2e-79 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
LDIBBJCO_01158 7.5e-253 gtr U Sugar (and other) transporter
LDIBBJCO_01159 0.0 P Domain of unknown function (DUF4976)
LDIBBJCO_01160 2e-271 aslB C Iron-sulfur cluster-binding domain
LDIBBJCO_01161 2e-155 G Binding-protein-dependent transport system inner membrane component
LDIBBJCO_01162 2.3e-144 malC G Binding-protein-dependent transport system inner membrane component
LDIBBJCO_01163 2.3e-245 msmE7 G Bacterial extracellular solute-binding protein
LDIBBJCO_01164 1.2e-230 nagC GK ROK family
LDIBBJCO_01165 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
LDIBBJCO_01166 8.3e-78 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
LDIBBJCO_01167 0.0 yjcE P Sodium/hydrogen exchanger family
LDIBBJCO_01168 1.4e-126 S membrane transporter protein
LDIBBJCO_01169 2.1e-145 ypfH S Phospholipase/Carboxylesterase
LDIBBJCO_01170 4.9e-154
LDIBBJCO_01171 2.2e-110 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
LDIBBJCO_01172 2e-37
LDIBBJCO_01173 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
LDIBBJCO_01174 2e-16 K helix_turn _helix lactose operon repressor
LDIBBJCO_01175 7.5e-86 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
LDIBBJCO_01176 8.9e-248 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
LDIBBJCO_01177 3.5e-206 EGP Major facilitator Superfamily
LDIBBJCO_01178 1.2e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LDIBBJCO_01179 5.9e-168 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
LDIBBJCO_01180 4.2e-302 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
LDIBBJCO_01181 1.6e-271 KLT Domain of unknown function (DUF4032)
LDIBBJCO_01182 4.4e-155
LDIBBJCO_01183 7.6e-18 tnp7109-21 L Integrase core domain
LDIBBJCO_01184 1.1e-131 K helix_turn _helix lactose operon repressor
LDIBBJCO_01185 4.2e-146 G Periplasmic binding protein domain
LDIBBJCO_01186 8.7e-178 3.6.3.17 G ATPases associated with a variety of cellular activities
LDIBBJCO_01187 5e-142 U Branched-chain amino acid transport system / permease component
LDIBBJCO_01188 1e-185
LDIBBJCO_01189 1.9e-183 argH 4.3.2.1 E argininosuccinate lyase
LDIBBJCO_01190 2.4e-32 relB L RelB antitoxin
LDIBBJCO_01191 8.5e-44 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
LDIBBJCO_01192 1.7e-30 L PFAM Integrase catalytic
LDIBBJCO_01193 1.9e-236 S AAA domain
LDIBBJCO_01194 1.6e-177 P Binding-protein-dependent transport system inner membrane component
LDIBBJCO_01195 1.1e-164 malC P Binding-protein-dependent transport system inner membrane component
LDIBBJCO_01196 4.1e-264 G Bacterial extracellular solute-binding protein
LDIBBJCO_01197 1.4e-305 Z012_09690 P Domain of unknown function (DUF4976)
LDIBBJCO_01198 1.3e-193 K helix_turn _helix lactose operon repressor
LDIBBJCO_01199 8.1e-262 aslB C Iron-sulfur cluster-binding domain
LDIBBJCO_01200 4e-134 S Sulfite exporter TauE/SafE
LDIBBJCO_01201 1.7e-273 aspA 4.3.1.1 E Fumarase C C-terminus
LDIBBJCO_01202 7.6e-138 M Mechanosensitive ion channel
LDIBBJCO_01203 3.1e-187 S CAAX protease self-immunity
LDIBBJCO_01204 5.7e-239 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
LDIBBJCO_01205 8.4e-132 U Binding-protein-dependent transport system inner membrane component
LDIBBJCO_01206 2.2e-160 U Binding-protein-dependent transport system inner membrane component
LDIBBJCO_01207 4.9e-218 P Bacterial extracellular solute-binding protein
LDIBBJCO_01208 9.1e-228 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
LDIBBJCO_01209 2.7e-180 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
LDIBBJCO_01210 7.4e-188 plsC2 2.3.1.51 I Phosphate acyltransferases
LDIBBJCO_01211 3.6e-64 psp1 3.5.99.10 J Endoribonuclease L-PSP
LDIBBJCO_01214 6.9e-118 cyaA 4.6.1.1 S CYTH
LDIBBJCO_01215 1.7e-171 trxA2 O Tetratricopeptide repeat
LDIBBJCO_01216 1.9e-178
LDIBBJCO_01217 1.2e-182
LDIBBJCO_01218 9.4e-159 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
LDIBBJCO_01219 5.2e-130 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
LDIBBJCO_01220 9.4e-49 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
LDIBBJCO_01221 2.1e-282 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LDIBBJCO_01222 5.5e-164 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LDIBBJCO_01223 6.7e-226 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LDIBBJCO_01224 7.5e-144 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LDIBBJCO_01225 5.1e-58 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LDIBBJCO_01226 1.7e-29 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LDIBBJCO_01227 7.3e-144 atpB C it plays a direct role in the translocation of protons across the membrane
LDIBBJCO_01228 4.7e-207 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LDIBBJCO_01230 4.9e-11 K BetR domain
LDIBBJCO_01236 5.5e-27
LDIBBJCO_01238 2.5e-56 L HNH endonuclease
LDIBBJCO_01239 1.9e-15
LDIBBJCO_01240 3.1e-124 S Terminase
LDIBBJCO_01241 1.9e-92 S Phage portal protein
LDIBBJCO_01242 1.2e-131 S Caudovirus prohead serine protease
LDIBBJCO_01244 8e-17
LDIBBJCO_01245 1.9e-19
LDIBBJCO_01246 1.5e-58
LDIBBJCO_01247 1.3e-53
LDIBBJCO_01248 5.9e-18
LDIBBJCO_01249 1.9e-206 NT phage tail tape measure protein
LDIBBJCO_01250 1.6e-112
LDIBBJCO_01252 6.5e-11
LDIBBJCO_01254 2.2e-77 3.2.1.20, 3.5.1.28 GH31 V N-acetylmuramoyl-L-alanine amidase
LDIBBJCO_01255 2.7e-23
LDIBBJCO_01256 2.9e-15 MU outer membrane autotransporter barrel domain protein
LDIBBJCO_01257 1.6e-41 S Protein of unknown function (DUF3800)
LDIBBJCO_01258 3.5e-99 S enterobacterial common antigen metabolic process
LDIBBJCO_01259 2.3e-48 S enterobacterial common antigen metabolic process
LDIBBJCO_01261 2.7e-88 K Helix-turn-helix XRE-family like proteins
LDIBBJCO_01263 3e-50 S Bacteriophage abortive infection AbiH
LDIBBJCO_01264 0.0 C Domain of unknown function (DUF4365)
LDIBBJCO_01265 1.2e-49 L PFAM Integrase catalytic
LDIBBJCO_01266 3.8e-147 gtrB GT2 M Glycosyl transferase family 2
LDIBBJCO_01267 4e-292 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LDIBBJCO_01268 8.3e-199 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LDIBBJCO_01269 2.6e-220 G polysaccharide deacetylase
LDIBBJCO_01270 9.9e-230 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
LDIBBJCO_01272 5.6e-33 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
LDIBBJCO_01273 1.4e-110 nusG K Participates in transcription elongation, termination and antitermination
LDIBBJCO_01274 1e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LDIBBJCO_01275 2.7e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
LDIBBJCO_01276 1.4e-164 QT PucR C-terminal helix-turn-helix domain
LDIBBJCO_01277 0.0
LDIBBJCO_01278 5e-162 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
LDIBBJCO_01279 1.8e-91 bioY S BioY family
LDIBBJCO_01280 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
LDIBBJCO_01281 4.5e-294 pccB I Carboxyl transferase domain
LDIBBJCO_01282 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
LDIBBJCO_01283 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
LDIBBJCO_01284 4.5e-191 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
LDIBBJCO_01285 2.1e-35 K Psort location Cytoplasmic, score
LDIBBJCO_01288 1.7e-105 bcp 1.11.1.15 O Redoxin
LDIBBJCO_01289 9.1e-142
LDIBBJCO_01290 1.4e-24 L Transposase, Mutator family
LDIBBJCO_01291 6.8e-178 I alpha/beta hydrolase fold
LDIBBJCO_01292 7.7e-91 S Appr-1'-p processing enzyme
LDIBBJCO_01293 1.9e-146 S phosphoesterase or phosphohydrolase
LDIBBJCO_01294 2e-140 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LDIBBJCO_01296 1.5e-132 S Phospholipase/Carboxylesterase
LDIBBJCO_01297 1.1e-200 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
LDIBBJCO_01298 8.4e-99 sixA 3.6.1.55 T Phosphoglycerate mutase family
LDIBBJCO_01300 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LDIBBJCO_01301 5.7e-163 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
LDIBBJCO_01302 2.8e-187 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
LDIBBJCO_01303 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
LDIBBJCO_01304 3.2e-178 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
LDIBBJCO_01305 7e-74 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
LDIBBJCO_01306 3.3e-291 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
LDIBBJCO_01307 9.4e-175 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
LDIBBJCO_01308 1e-209 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
LDIBBJCO_01309 7.2e-231 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
LDIBBJCO_01310 4.9e-142 cobB2 K Sir2 family
LDIBBJCO_01311 9.2e-10
LDIBBJCO_01313 3.5e-45
LDIBBJCO_01315 2.8e-13 M Collagen triple helix repeat (20 copies)
LDIBBJCO_01316 3.5e-08 M Collagen triple helix repeat (20 copies)
LDIBBJCO_01317 4.9e-59
LDIBBJCO_01320 3.4e-81 S Psort location Cytoplasmic, score
LDIBBJCO_01322 1.4e-89 L DNA integration
LDIBBJCO_01324 2.9e-45 S SPP1 phage holin
LDIBBJCO_01325 1.5e-132 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
LDIBBJCO_01327 1.2e-20 tag 3.2.2.20 L Methyladenine glycosylase
LDIBBJCO_01329 1e-124 S GyrI-like small molecule binding domain
LDIBBJCO_01330 3.1e-89 K Putative zinc ribbon domain
LDIBBJCO_01331 1.4e-24 zntR K bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
LDIBBJCO_01332 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
LDIBBJCO_01333 4e-127 3.6.1.13 L NUDIX domain
LDIBBJCO_01334 1.5e-177 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
LDIBBJCO_01335 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LDIBBJCO_01336 2.8e-124 pdtaR T Response regulator receiver domain protein
LDIBBJCO_01338 4.3e-109 aspA 3.6.1.13 L NUDIX domain
LDIBBJCO_01339 1e-273 pyk 2.7.1.40 G Pyruvate kinase
LDIBBJCO_01340 1e-176 terC P Integral membrane protein, TerC family
LDIBBJCO_01341 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
LDIBBJCO_01342 3.4e-107 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LDIBBJCO_01343 3.2e-254 rpsA J Ribosomal protein S1
LDIBBJCO_01344 3.1e-164 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LDIBBJCO_01345 1.6e-184 P Zinc-uptake complex component A periplasmic
LDIBBJCO_01346 3.8e-162 znuC P ATPases associated with a variety of cellular activities
LDIBBJCO_01347 2.6e-136 znuB U ABC 3 transport family
LDIBBJCO_01348 6.2e-88 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
LDIBBJCO_01349 2.1e-100 carD K CarD-like/TRCF domain
LDIBBJCO_01350 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
LDIBBJCO_01351 1e-128 T Response regulator receiver domain protein
LDIBBJCO_01352 4.4e-197 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
LDIBBJCO_01353 2.2e-122 ctsW S Phosphoribosyl transferase domain
LDIBBJCO_01354 2.8e-148 cof 5.2.1.8 T Eukaryotic phosphomannomutase
LDIBBJCO_01355 1.8e-77 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
LDIBBJCO_01356 1.2e-259
LDIBBJCO_01357 0.0 S Glycosyl transferase, family 2
LDIBBJCO_01358 1.8e-55 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
LDIBBJCO_01359 1.3e-206 K Cell envelope-related transcriptional attenuator domain
LDIBBJCO_01360 0.0 D FtsK/SpoIIIE family
LDIBBJCO_01361 4.9e-47 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
LDIBBJCO_01362 2.2e-279 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
LDIBBJCO_01363 3.1e-146 yplQ S Haemolysin-III related
LDIBBJCO_01364 4.4e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LDIBBJCO_01365 1.4e-74 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
LDIBBJCO_01366 6.7e-281 sdaA 4.3.1.17 E Serine dehydratase alpha chain
LDIBBJCO_01367 5.4e-93
LDIBBJCO_01368 1.7e-07 int8 L Phage integrase family
LDIBBJCO_01369 1.9e-14 int8 L Phage integrase family
LDIBBJCO_01370 8.9e-64 int8 L Phage integrase family
LDIBBJCO_01371 4e-13
LDIBBJCO_01372 6.5e-10 S Predicted membrane protein (DUF2335)
LDIBBJCO_01373 1.3e-07
LDIBBJCO_01376 1.8e-33
LDIBBJCO_01377 2.3e-07
LDIBBJCO_01378 5.5e-122 XK27_00240 K Fic/DOC family
LDIBBJCO_01380 3.6e-135 L PFAM Integrase catalytic
LDIBBJCO_01381 5.8e-32 L Transposase
LDIBBJCO_01382 1.3e-35 L PFAM Integrase catalytic
LDIBBJCO_01384 5.1e-07 L Transposase
LDIBBJCO_01385 1.5e-186 K Periplasmic binding protein domain
LDIBBJCO_01386 1.8e-141 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
LDIBBJCO_01387 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
LDIBBJCO_01388 1.4e-150 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
LDIBBJCO_01389 6.1e-153 yecS E Binding-protein-dependent transport system inner membrane component
LDIBBJCO_01390 2.4e-167 pknD ET ABC transporter, substrate-binding protein, family 3
LDIBBJCO_01391 6.1e-142 pknD ET ABC transporter, substrate-binding protein, family 3
LDIBBJCO_01392 6.3e-79 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
LDIBBJCO_01393 4e-147 usp 3.5.1.28 CBM50 D CHAP domain protein
LDIBBJCO_01394 9.8e-161 ftsX D Part of the ABC transporter FtsEX involved in cellular division
LDIBBJCO_01395 1.3e-205 ftsE D Cell division ATP-binding protein FtsE
LDIBBJCO_01396 1.6e-205 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
LDIBBJCO_01397 3.8e-268 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
LDIBBJCO_01398 2.8e-122 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LDIBBJCO_01399 1.7e-257 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LDIBBJCO_01400 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
LDIBBJCO_01401 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LDIBBJCO_01402 1.7e-162 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LDIBBJCO_01403 2.1e-132 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
LDIBBJCO_01404 1.7e-235 G Major Facilitator Superfamily
LDIBBJCO_01405 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
LDIBBJCO_01406 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
LDIBBJCO_01407 3.6e-221 KLT Protein tyrosine kinase
LDIBBJCO_01408 0.0 S Fibronectin type 3 domain
LDIBBJCO_01409 2.5e-239 S Protein of unknown function DUF58
LDIBBJCO_01410 0.0 E Transglutaminase-like superfamily
LDIBBJCO_01411 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LDIBBJCO_01412 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LDIBBJCO_01413 2.3e-128
LDIBBJCO_01414 1.1e-186 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
LDIBBJCO_01415 7.6e-115 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
LDIBBJCO_01416 3.2e-253 S UPF0210 protein
LDIBBJCO_01417 6.4e-44 gcvR T Belongs to the UPF0237 family
LDIBBJCO_01418 5.3e-234 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
LDIBBJCO_01419 8.6e-253 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
LDIBBJCO_01420 2.8e-123 glpR K DeoR C terminal sensor domain
LDIBBJCO_01421 6.1e-229 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
LDIBBJCO_01422 6.3e-230 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
LDIBBJCO_01423 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
LDIBBJCO_01424 2.1e-134 glxR K helix_turn_helix, cAMP Regulatory protein
LDIBBJCO_01425 1.2e-216 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
LDIBBJCO_01426 5.4e-192 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
LDIBBJCO_01427 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
LDIBBJCO_01428 5.5e-225 S Uncharacterized conserved protein (DUF2183)
LDIBBJCO_01429 5.9e-70 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
LDIBBJCO_01430 3.7e-211 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
LDIBBJCO_01431 2.2e-72 hemN H Involved in the biosynthesis of porphyrin-containing compound
LDIBBJCO_01432 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
LDIBBJCO_01433 5.8e-34 rpsT J Binds directly to 16S ribosomal RNA
LDIBBJCO_01434 8.8e-139 S UPF0126 domain
LDIBBJCO_01435 3.9e-143 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
LDIBBJCO_01436 1.6e-226 ilvE 2.6.1.42 E Amino-transferase class IV
LDIBBJCO_01437 1.7e-103 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
LDIBBJCO_01438 1.4e-234 yhjX EGP Major facilitator Superfamily
LDIBBJCO_01439 5.6e-232 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
LDIBBJCO_01440 2.1e-43 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
LDIBBJCO_01441 1.1e-204 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
LDIBBJCO_01442 0.0 fadD 6.2.1.3 I AMP-binding enzyme
LDIBBJCO_01443 1.6e-185 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LDIBBJCO_01444 2.3e-249 corC S CBS domain
LDIBBJCO_01445 4.7e-102 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LDIBBJCO_01446 8.8e-215 phoH T PhoH-like protein
LDIBBJCO_01447 4.4e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
LDIBBJCO_01448 3e-134 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
LDIBBJCO_01450 3.3e-166 spoU 2.1.1.185 J SpoU rRNA Methylase family
LDIBBJCO_01451 8.1e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LDIBBJCO_01452 3.2e-109 yitW S Iron-sulfur cluster assembly protein
LDIBBJCO_01453 8.1e-102 iscU C SUF system FeS assembly protein, NifU family
LDIBBJCO_01454 1.2e-238 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LDIBBJCO_01455 7e-144 sufC O FeS assembly ATPase SufC
LDIBBJCO_01456 6.1e-235 sufD O FeS assembly protein SufD
LDIBBJCO_01457 3.3e-291 sufB O FeS assembly protein SufB
LDIBBJCO_01458 0.0 S L,D-transpeptidase catalytic domain
LDIBBJCO_01459 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
LDIBBJCO_01460 9.1e-80 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
LDIBBJCO_01461 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
LDIBBJCO_01462 1e-215 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
LDIBBJCO_01463 5.3e-70 3.4.23.43 S Type IV leader peptidase family
LDIBBJCO_01464 4.6e-195 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LDIBBJCO_01465 6e-71 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LDIBBJCO_01466 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LDIBBJCO_01467 1.6e-35
LDIBBJCO_01468 2.3e-55 WQ51_05790 S Bacterial protein of unknown function (DUF948)
LDIBBJCO_01469 1.9e-129 pgm3 G Phosphoglycerate mutase family
LDIBBJCO_01470 1.2e-48 relB L RelB antitoxin
LDIBBJCO_01471 3e-65 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
LDIBBJCO_01472 1.2e-111 E Transglutaminase-like superfamily
LDIBBJCO_01473 3.8e-44 sdpI S SdpI/YhfL protein family
LDIBBJCO_01474 1.1e-89 3.5.4.5 F cytidine deaminase activity
LDIBBJCO_01475 2e-151 S Peptidase C26
LDIBBJCO_01476 1.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LDIBBJCO_01477 4.6e-139 lolD V ABC transporter
LDIBBJCO_01478 8.2e-216 V FtsX-like permease family
LDIBBJCO_01479 9.9e-62 S Domain of unknown function (DUF4418)
LDIBBJCO_01480 0.0 pcrA 3.6.4.12 L DNA helicase
LDIBBJCO_01481 1.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
LDIBBJCO_01482 2.6e-242 pbuX F Permease family
LDIBBJCO_01483 2.8e-31 yozG K Cro/C1-type HTH DNA-binding domain
LDIBBJCO_01484 1.1e-40 S Protein of unknown function (DUF2975)
LDIBBJCO_01485 4e-158 I Serine aminopeptidase, S33
LDIBBJCO_01486 2.8e-163 M pfam nlp p60
LDIBBJCO_01487 3.5e-106 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
LDIBBJCO_01488 4.5e-109 3.4.13.21 E Peptidase family S51
LDIBBJCO_01489 2.8e-195
LDIBBJCO_01490 1.5e-39 E GDSL-like Lipase/Acylhydrolase family
LDIBBJCO_01491 2.5e-283 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
LDIBBJCO_01492 4.3e-248 V ABC-2 family transporter protein
LDIBBJCO_01493 7.5e-225 V ABC-2 family transporter protein
LDIBBJCO_01494 1.3e-187 V ATPases associated with a variety of cellular activities
LDIBBJCO_01495 1.3e-120 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
LDIBBJCO_01496 9.3e-245 T Histidine kinase
LDIBBJCO_01497 8.3e-114 K helix_turn_helix, Lux Regulon
LDIBBJCO_01498 2.1e-114 MA20_27875 P Protein of unknown function DUF47
LDIBBJCO_01499 1.8e-187 pit P Phosphate transporter family
LDIBBJCO_01500 1.6e-257 nplT G Alpha amylase, catalytic domain
LDIBBJCO_01501 0.0 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
LDIBBJCO_01502 3.2e-234 rutG F Permease family
LDIBBJCO_01503 1.1e-160 3.1.3.73 G Phosphoglycerate mutase family
LDIBBJCO_01504 8.7e-107 3.1.3.27 E haloacid dehalogenase-like hydrolase
LDIBBJCO_01505 2e-239 EGP Major facilitator Superfamily
LDIBBJCO_01507 1.7e-63 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LDIBBJCO_01508 3.8e-154 feoB P transporter of a GTP-driven Fe(2 ) uptake system
LDIBBJCO_01509 4.7e-60 L Integrase core domain
LDIBBJCO_01510 6.7e-50 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
LDIBBJCO_01511 1.7e-81 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
LDIBBJCO_01512 6.4e-307 comE S Competence protein
LDIBBJCO_01513 9e-173 holA 2.7.7.7 L DNA polymerase III delta subunit
LDIBBJCO_01514 3.4e-87 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
LDIBBJCO_01515 1.5e-158 yeaZ 2.3.1.234 O Glycoprotease family
LDIBBJCO_01516 1e-105 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
LDIBBJCO_01517 6.2e-196 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LDIBBJCO_01519 3.6e-120 K helix_turn_helix, Lux Regulon
LDIBBJCO_01520 3.3e-239 T Histidine kinase
LDIBBJCO_01522 3.6e-61
LDIBBJCO_01523 2.5e-39 L Transposase
LDIBBJCO_01524 1.8e-133 fhaB 2.4.1.129, 3.4.16.4 GT51 M Rib/alpha-like repeat
LDIBBJCO_01525 1.9e-127 fhaB 2.4.1.129, 3.4.16.4 GT51 M Rib/alpha-like repeat
LDIBBJCO_01526 3.9e-148 malC G Binding-protein-dependent transport system inner membrane component
LDIBBJCO_01527 1.4e-168 G ABC transporter permease
LDIBBJCO_01528 3.6e-24
LDIBBJCO_01529 4.6e-135
LDIBBJCO_01530 1.3e-162 yfiL V ATPases associated with a variety of cellular activities
LDIBBJCO_01531 4.5e-70
LDIBBJCO_01532 1.4e-62
LDIBBJCO_01533 4.5e-34 S EamA-like transporter family
LDIBBJCO_01534 1.6e-260 G Bacterial extracellular solute-binding protein
LDIBBJCO_01535 0.0 cydD V ABC transporter transmembrane region
LDIBBJCO_01536 5.9e-21 araE EGP Major facilitator Superfamily
LDIBBJCO_01537 7.2e-40 araE EGP Major facilitator Superfamily
LDIBBJCO_01538 0.0 fadD 6.2.1.3 I AMP-binding enzyme
LDIBBJCO_01539 3.6e-210 K helix_turn _helix lactose operon repressor
LDIBBJCO_01540 6.5e-159 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LDIBBJCO_01541 3.2e-164 lepB 3.4.21.89 U Belongs to the peptidase S26 family
LDIBBJCO_01542 8.6e-60 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
LDIBBJCO_01544 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
LDIBBJCO_01545 6.5e-265 abcT3 P ATPases associated with a variety of cellular activities
LDIBBJCO_01546 0.0 pgi 5.3.1.9 G Belongs to the GPI family
LDIBBJCO_01549 3.6e-177 S Auxin Efflux Carrier
LDIBBJCO_01550 1.7e-126 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LDIBBJCO_01551 1.1e-144 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
LDIBBJCO_01552 4.7e-249 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LDIBBJCO_01553 4.5e-117
LDIBBJCO_01554 6.3e-78 soxR K MerR, DNA binding
LDIBBJCO_01555 2.3e-195 yghZ C Aldo/keto reductase family
LDIBBJCO_01556 2.4e-49 S Protein of unknown function (DUF3039)
LDIBBJCO_01557 6e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LDIBBJCO_01558 7.9e-87
LDIBBJCO_01559 3.8e-116 yceD S Uncharacterized ACR, COG1399
LDIBBJCO_01560 9.3e-21 rpmF J Belongs to the bacterial ribosomal protein bL32 family
LDIBBJCO_01561 9.7e-135 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
LDIBBJCO_01562 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
LDIBBJCO_01563 9e-93 ilvN 2.2.1.6 E ACT domain
LDIBBJCO_01564 3.9e-44 stbC S Plasmid stability protein
LDIBBJCO_01565 3.9e-72 vapC S Toxic component of a toxin-antitoxin (TA) module. An RNase
LDIBBJCO_01566 0.0 yjjK S ABC transporter
LDIBBJCO_01567 9.5e-135 guaA1 6.3.5.2 F Peptidase C26
LDIBBJCO_01568 0.0 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
LDIBBJCO_01569 8.7e-162 P Cation efflux family
LDIBBJCO_01570 2.1e-270 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LDIBBJCO_01571 3.7e-90 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LDIBBJCO_01572 3.8e-254 MA20_36090 S Psort location Cytoplasmic, score 8.87
LDIBBJCO_01573 1.3e-106 K Bacterial regulatory proteins, tetR family
LDIBBJCO_01574 1.3e-125 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
LDIBBJCO_01575 1.6e-159 3.5.1.106 I carboxylic ester hydrolase activity
LDIBBJCO_01576 2.7e-304 E Bacterial extracellular solute-binding proteins, family 5 Middle
LDIBBJCO_01577 4.6e-153 oppB6 EP Binding-protein-dependent transport system inner membrane component
LDIBBJCO_01578 0.0 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
LDIBBJCO_01579 1.7e-148 oppF E ATPases associated with a variety of cellular activities
LDIBBJCO_01580 2e-180 nanL 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
LDIBBJCO_01581 3.7e-148 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
LDIBBJCO_01582 7.6e-261 EGP Major Facilitator Superfamily
LDIBBJCO_01583 6e-163 rbsK 2.7.1.15 G Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LDIBBJCO_01584 4.9e-229 bdhA C Iron-containing alcohol dehydrogenase
LDIBBJCO_01585 7.1e-132 3.1.3.18 S Haloacid dehalogenase-like hydrolase
LDIBBJCO_01586 2.8e-190 rihB 3.2.2.1, 3.2.2.8 F Inosine-uridine preferring nucleoside hydrolase
LDIBBJCO_01587 2.6e-180 ydjH 2.7.1.15 G pfkB family carbohydrate kinase
LDIBBJCO_01588 1.4e-118 trpF 5.3.1.24 E N-(5'phosphoribosyl)anthranilate (PRA) isomerase
LDIBBJCO_01589 2.1e-154 P ATPases associated with a variety of cellular activities
LDIBBJCO_01590 5.2e-153 P ATPases associated with a variety of cellular activities
LDIBBJCO_01591 6.4e-140 cbiQ P Cobalt transport protein
LDIBBJCO_01592 1.2e-99 2.7.7.65 T ECF transporter, substrate-specific component
LDIBBJCO_01593 0.0 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LDIBBJCO_01594 0.0 V ABC transporter transmembrane region
LDIBBJCO_01595 0.0 V ABC transporter, ATP-binding protein
LDIBBJCO_01596 5.2e-90 K MarR family
LDIBBJCO_01597 0.0 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
LDIBBJCO_01598 6.6e-86 K Bacterial regulatory proteins, tetR family
LDIBBJCO_01599 4.9e-211 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
LDIBBJCO_01600 2.6e-70 S Nucleotidyltransferase substrate binding protein like
LDIBBJCO_01601 3.3e-46 S Nucleotidyltransferase domain
LDIBBJCO_01602 6.7e-198 G Psort location CytoplasmicMembrane, score 10.00
LDIBBJCO_01603 8.1e-248 2.7.7.7 S Protein of unknown function (DUF4038)
LDIBBJCO_01604 4.8e-80 K Bacterial regulatory proteins, tetR family
LDIBBJCO_01605 7.3e-199 G Transporter major facilitator family protein
LDIBBJCO_01606 6.6e-52 K Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LDIBBJCO_01608 5.8e-20 yclK 2.7.13.3 T PhoQ Sensor
LDIBBJCO_01609 8.3e-70 mgtC S MgtC family
LDIBBJCO_01610 8.3e-23 K Antidote-toxin recognition MazE, bacterial antitoxin
LDIBBJCO_01611 3e-37 S PIN domain
LDIBBJCO_01612 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
LDIBBJCO_01613 4.6e-119 EP N-terminal TM domain of oligopeptide transport permease C
LDIBBJCO_01614 2.9e-147 EP Binding-protein-dependent transport system inner membrane component
LDIBBJCO_01615 3e-111 dppF E ABC transporter
LDIBBJCO_01616 1.9e-113 oppD EP ATPases associated with a variety of cellular activities
LDIBBJCO_01617 1.6e-190 E PFAM extracellular solute-binding protein, family 5
LDIBBJCO_01618 2.8e-58 K Bacterial regulatory proteins, tetR family
LDIBBJCO_01619 2.9e-27 K AraC-like ligand binding domain
LDIBBJCO_01620 6.9e-19 K AraC-like ligand binding domain
LDIBBJCO_01621 1.4e-203 3.2.1.31 G Belongs to the glycosyl hydrolase 2 family
LDIBBJCO_01622 3e-184 E PFAM extracellular solute-binding protein, family 5
LDIBBJCO_01623 2.3e-126 G Glycosyl hydrolases family 43
LDIBBJCO_01624 1.2e-254 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
LDIBBJCO_01625 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
LDIBBJCO_01626 6.5e-136 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LDIBBJCO_01627 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
LDIBBJCO_01628 1.8e-256 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LDIBBJCO_01629 2.4e-41 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LDIBBJCO_01630 5.1e-91 ywrO 1.6.5.2 S Flavodoxin-like fold
LDIBBJCO_01631 0.0 fadD 6.2.1.3 I AMP-binding enzyme
LDIBBJCO_01632 2.9e-61 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
LDIBBJCO_01633 3.7e-78 F Nucleoside 2-deoxyribosyltransferase
LDIBBJCO_01635 1.6e-200 S Endonuclease/Exonuclease/phosphatase family
LDIBBJCO_01636 1.7e-179 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
LDIBBJCO_01637 6e-235 aspB E Aminotransferase class-V
LDIBBJCO_01638 8.5e-201 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
LDIBBJCO_01639 7.4e-88 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
LDIBBJCO_01640 1.2e-100 XK27_03610 K Acetyltransferase (GNAT) domain
LDIBBJCO_01641 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
LDIBBJCO_01642 2.6e-146 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
LDIBBJCO_01643 2.4e-250 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
LDIBBJCO_01644 6e-151 map 3.4.11.18 E Methionine aminopeptidase
LDIBBJCO_01645 5.2e-143 S Short repeat of unknown function (DUF308)
LDIBBJCO_01646 0.0 pepO 3.4.24.71 O Peptidase family M13
LDIBBJCO_01647 7e-116 L Single-strand binding protein family
LDIBBJCO_01648 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
LDIBBJCO_01649 5.8e-155 pflA 1.97.1.4 O Radical SAM superfamily
LDIBBJCO_01650 1.1e-267 recD2 3.6.4.12 L PIF1-like helicase
LDIBBJCO_01651 4.8e-122 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
LDIBBJCO_01652 4.8e-293 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
LDIBBJCO_01653 3e-213 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
LDIBBJCO_01654 1.5e-118 ywlC 2.7.7.87 J Belongs to the SUA5 family
LDIBBJCO_01655 2.5e-124 livF E ATPases associated with a variety of cellular activities
LDIBBJCO_01656 6.3e-162 E Branched-chain amino acid ATP-binding cassette transporter
LDIBBJCO_01657 1e-188 livM U Belongs to the binding-protein-dependent transport system permease family
LDIBBJCO_01658 5.4e-111 U Belongs to the binding-protein-dependent transport system permease family
LDIBBJCO_01659 1.8e-207 livK E Receptor family ligand binding region
LDIBBJCO_01660 1.2e-163 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
LDIBBJCO_01661 3.7e-191 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LDIBBJCO_01662 1.3e-36 rpmE J Binds the 23S rRNA
LDIBBJCO_01664 1.1e-99 yebQ EGP Major facilitator Superfamily
LDIBBJCO_01665 2.4e-147
LDIBBJCO_01666 1.5e-68 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
LDIBBJCO_01667 8.7e-164 dkgB S Oxidoreductase, aldo keto reductase family protein
LDIBBJCO_01668 4.3e-16 EGP Major facilitator superfamily
LDIBBJCO_01669 1.2e-86 K Winged helix DNA-binding domain
LDIBBJCO_01670 5.3e-178 glkA 2.7.1.2 G ROK family
LDIBBJCO_01672 4.5e-308 EGP Major Facilitator Superfamily
LDIBBJCO_01673 0.0 yjjK S ATP-binding cassette protein, ChvD family
LDIBBJCO_01674 2.5e-169 tesB I Thioesterase-like superfamily
LDIBBJCO_01675 3.5e-86 S Protein of unknown function (DUF3180)
LDIBBJCO_01676 6.5e-226 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LDIBBJCO_01677 1.3e-162 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LDIBBJCO_01678 2.8e-117 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
LDIBBJCO_01679 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LDIBBJCO_01680 7.9e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
LDIBBJCO_01681 2.2e-210 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
LDIBBJCO_01682 1.9e-251 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
LDIBBJCO_01683 6.9e-298
LDIBBJCO_01684 1.5e-189 natA V ATPases associated with a variety of cellular activities
LDIBBJCO_01685 7.9e-235 epsG M Glycosyl transferase family 21
LDIBBJCO_01686 1.9e-281 S AI-2E family transporter
LDIBBJCO_01687 2.3e-178 3.4.14.13 M Glycosyltransferase like family 2
LDIBBJCO_01688 5.2e-204 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
LDIBBJCO_01689 1.6e-262 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
LDIBBJCO_01692 9.9e-161 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
LDIBBJCO_01694 9.4e-16 L Phage integrase family
LDIBBJCO_01695 1.9e-267 lacS G Psort location CytoplasmicMembrane, score 10.00
LDIBBJCO_01696 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
LDIBBJCO_01697 1.9e-112 L Domain of unknown function (DUF4862)
LDIBBJCO_01698 1.8e-121 S Calcineurin-like phosphoesterase
LDIBBJCO_01699 1e-151 K FCD
LDIBBJCO_01700 5.3e-242 P Domain of unknown function (DUF4143)
LDIBBJCO_01701 0.0 nanI 3.2.1.18 GH33 G BNR repeat-like domain
LDIBBJCO_01702 5.1e-13
LDIBBJCO_01704 4.5e-80 K ParB-like nuclease domain
LDIBBJCO_01706 9.7e-60 V HNH endonuclease
LDIBBJCO_01707 5.3e-44 A 3'-to-5' exoribonuclease specific for small oligoribonucleotides
LDIBBJCO_01710 6.5e-42 S Protein of unknwon function (DUF3310)
LDIBBJCO_01712 5.3e-35 A 3'-to-5' exoribonuclease specific for small oligoribonucleotides
LDIBBJCO_01717 4.5e-10
LDIBBJCO_01719 3.9e-91 J tRNA 5'-leader removal
LDIBBJCO_01721 1.3e-44 V HNH nucleases
LDIBBJCO_01722 7.5e-18
LDIBBJCO_01723 5.5e-182 S Terminase
LDIBBJCO_01724 1.1e-204 S Phage portal protein, SPP1 Gp6-like
LDIBBJCO_01725 3e-90
LDIBBJCO_01727 1.2e-54
LDIBBJCO_01728 5.2e-135 V Phage capsid family
LDIBBJCO_01730 8.7e-48 S Phage protein Gp19/Gp15/Gp42
LDIBBJCO_01731 8.7e-24
LDIBBJCO_01732 1.8e-24
LDIBBJCO_01733 8.1e-51
LDIBBJCO_01734 1.2e-28 thiS 2.8.1.10 H ThiS family
LDIBBJCO_01735 3.6e-157 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
LDIBBJCO_01736 6e-146 moeB 2.7.7.80 H ThiF family
LDIBBJCO_01737 3.3e-64 M1-798 P Rhodanese Homology Domain
LDIBBJCO_01738 4.6e-102 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
LDIBBJCO_01739 5.1e-131 S Putative ABC-transporter type IV
LDIBBJCO_01740 5e-221 S Protein of unknown function (DUF975)
LDIBBJCO_01741 1.7e-103 S Protein of unknown function (DUF975)
LDIBBJCO_01742 2.6e-255 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LDIBBJCO_01743 2.3e-144 L Tetratricopeptide repeat
LDIBBJCO_01744 5.4e-200 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
LDIBBJCO_01746 5.5e-141 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
LDIBBJCO_01747 1.3e-90
LDIBBJCO_01748 9e-69 trkA P TrkA-N domain
LDIBBJCO_01749 8.3e-12 trkB P Cation transport protein
LDIBBJCO_01750 4.3e-183 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LDIBBJCO_01751 0.0 recN L May be involved in recombinational repair of damaged DNA
LDIBBJCO_01752 9.4e-118 S Haloacid dehalogenase-like hydrolase
LDIBBJCO_01753 6e-13 J Acetyltransferase (GNAT) domain
LDIBBJCO_01754 6.1e-19 J Acetyltransferase (GNAT) domain
LDIBBJCO_01755 4.8e-58 K helix_turn_helix gluconate operon transcriptional repressor
LDIBBJCO_01756 8.5e-173 V ATPases associated with a variety of cellular activities
LDIBBJCO_01757 5.9e-110 S ABC-2 family transporter protein
LDIBBJCO_01758 8.5e-104
LDIBBJCO_01759 1e-39 S Psort location Cytoplasmic, score
LDIBBJCO_01760 4.3e-283 thrC 4.2.3.1 E Threonine synthase N terminus
LDIBBJCO_01761 3.1e-237 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LDIBBJCO_01762 1.9e-98
LDIBBJCO_01763 3.2e-138 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LDIBBJCO_01764 2.2e-91 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
LDIBBJCO_01765 1.4e-17 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
LDIBBJCO_01766 0.0 S Uncharacterised protein family (UPF0182)
LDIBBJCO_01767 1.5e-90 2.3.1.183 M Acetyltransferase (GNAT) domain
LDIBBJCO_01768 1.5e-114 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
LDIBBJCO_01769 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LDIBBJCO_01770 5.4e-180 1.1.1.65 C Aldo/keto reductase family
LDIBBJCO_01771 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
LDIBBJCO_01772 6.6e-70 divIC D Septum formation initiator
LDIBBJCO_01773 8.2e-102 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
LDIBBJCO_01774 5.8e-183 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
LDIBBJCO_01776 4.7e-41 L Phage integrase, N-terminal SAM-like domain
LDIBBJCO_01777 3.3e-30 V AAA domain, putative AbiEii toxin, Type IV TA system
LDIBBJCO_01778 2.2e-134 L PFAM Relaxase mobilization nuclease family protein
LDIBBJCO_01779 1.4e-144 S Fic/DOC family
LDIBBJCO_01781 1.9e-34 xerH L Phage integrase family
LDIBBJCO_01782 3.6e-87 M Peptidase family M23
LDIBBJCO_01783 1e-256 G ABC transporter substrate-binding protein
LDIBBJCO_01784 2.3e-242 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
LDIBBJCO_01785 1.5e-208 guaB 1.1.1.205 F IMP dehydrogenase family protein
LDIBBJCO_01786 7.4e-91
LDIBBJCO_01787 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
LDIBBJCO_01788 2.2e-87 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LDIBBJCO_01789 5.8e-144 rpsB J Belongs to the universal ribosomal protein uS2 family
LDIBBJCO_01790 1.4e-145 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LDIBBJCO_01791 2.8e-134 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
LDIBBJCO_01792 1.5e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
LDIBBJCO_01793 3.7e-174 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
LDIBBJCO_01794 2.7e-224 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
LDIBBJCO_01795 3.3e-71 3.5.1.124 S DJ-1/PfpI family
LDIBBJCO_01796 1.4e-139 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
LDIBBJCO_01797 5.3e-71 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LDIBBJCO_01798 9.9e-299 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LDIBBJCO_01799 1.1e-64 yijF S Domain of unknown function (DUF1287)
LDIBBJCO_01800 2.6e-170 3.6.4.12
LDIBBJCO_01801 1.3e-75
LDIBBJCO_01802 2.5e-64 yeaO K Protein of unknown function, DUF488
LDIBBJCO_01804 1.4e-295 mmuP E amino acid
LDIBBJCO_01805 6.3e-20 G Major facilitator Superfamily
LDIBBJCO_01806 1.7e-39 2.6.1.76 EGP Major Facilitator Superfamily
LDIBBJCO_01808 5e-49 hipA 2.7.11.1 S kinase activity
LDIBBJCO_01809 1.3e-45 K sequence-specific DNA binding
LDIBBJCO_01810 3.2e-110
LDIBBJCO_01811 4.1e-23
LDIBBJCO_01812 8.8e-16 fic D Fic/DOC family
LDIBBJCO_01813 2.2e-122 V ATPases associated with a variety of cellular activities
LDIBBJCO_01814 2.5e-127
LDIBBJCO_01815 1.4e-102
LDIBBJCO_01816 5.4e-133 L IstB-like ATP binding protein
LDIBBJCO_01817 2.6e-23 P ATPases associated with a variety of cellular activities
LDIBBJCO_01818 3.5e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
LDIBBJCO_01819 2.3e-82 argR K Regulates arginine biosynthesis genes
LDIBBJCO_01820 3.9e-184 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LDIBBJCO_01821 9.3e-250 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
LDIBBJCO_01822 8.2e-179 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
LDIBBJCO_01823 1.7e-213 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
LDIBBJCO_01824 1.1e-203 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
LDIBBJCO_01825 4.8e-93
LDIBBJCO_01826 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
LDIBBJCO_01827 7.7e-202 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LDIBBJCO_01828 6e-160 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LDIBBJCO_01829 1.2e-158 cbiQ P Cobalt transport protein
LDIBBJCO_01830 3.4e-280 ykoD P ATPases associated with a variety of cellular activities
LDIBBJCO_01831 6.2e-108 ykoE S ABC-type cobalt transport system, permease component
LDIBBJCO_01832 4e-259 argE E Peptidase dimerisation domain
LDIBBJCO_01833 6.9e-102 S Protein of unknown function (DUF3043)
LDIBBJCO_01834 1.3e-276 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LDIBBJCO_01835 2.1e-143 S Domain of unknown function (DUF4191)
LDIBBJCO_01836 4.3e-280 glnA 6.3.1.2 E glutamine synthetase
LDIBBJCO_01837 3e-204 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
LDIBBJCO_01838 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LDIBBJCO_01839 0.0 S Tetratricopeptide repeat
LDIBBJCO_01840 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LDIBBJCO_01842 4.8e-140 bioM P ATPases associated with a variety of cellular activities
LDIBBJCO_01843 6.9e-223 E Aminotransferase class I and II
LDIBBJCO_01844 5.2e-190 P NMT1/THI5 like
LDIBBJCO_01845 4.5e-135 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
LDIBBJCO_01846 3.1e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LDIBBJCO_01847 4.5e-129 recO L Involved in DNA repair and RecF pathway recombination
LDIBBJCO_01848 0.0 I acetylesterase activity
LDIBBJCO_01849 5.3e-231 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
LDIBBJCO_01850 1.8e-220 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
LDIBBJCO_01851 3.4e-209 2.7.11.1 NU Tfp pilus assembly protein FimV
LDIBBJCO_01853 1.6e-73 S Protein of unknown function (DUF3052)
LDIBBJCO_01854 1.5e-156 lon T Belongs to the peptidase S16 family
LDIBBJCO_01855 2.3e-296 S Zincin-like metallopeptidase
LDIBBJCO_01856 2.9e-290 uvrD2 3.6.4.12 L DNA helicase
LDIBBJCO_01857 5.5e-300 mphA S Aminoglycoside phosphotransferase
LDIBBJCO_01858 4.7e-32 S Protein of unknown function (DUF3107)
LDIBBJCO_01859 5.5e-169 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
LDIBBJCO_01860 4.2e-127 S Vitamin K epoxide reductase
LDIBBJCO_01861 2.3e-170 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
LDIBBJCO_01862 1.1e-147 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
LDIBBJCO_01863 2.9e-159 S Patatin-like phospholipase
LDIBBJCO_01864 1.9e-58 S Domain of unknown function (DUF4143)
LDIBBJCO_01865 7.2e-116 XK27_08050 O prohibitin homologues
LDIBBJCO_01866 2.7e-08 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
LDIBBJCO_01867 1.2e-41 XAC3035 O Glutaredoxin
LDIBBJCO_01868 1.2e-233 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
LDIBBJCO_01869 2.8e-125 ypfH S Phospholipase/Carboxylesterase
LDIBBJCO_01870 0.0 tetP J Elongation factor G, domain IV
LDIBBJCO_01872 8.3e-136 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
LDIBBJCO_01873 1.4e-104 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
LDIBBJCO_01874 6.7e-170 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
LDIBBJCO_01875 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
LDIBBJCO_01876 2e-241 carA 6.3.5.5 F Belongs to the CarA family
LDIBBJCO_01877 1.1e-92 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LDIBBJCO_01878 3.9e-104 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LDIBBJCO_01879 4.2e-127 ybbL V ATPases associated with a variety of cellular activities
LDIBBJCO_01880 7.1e-136 ybbM V Uncharacterised protein family (UPF0014)
LDIBBJCO_01881 0.0 T Diguanylate cyclase, GGDEF domain
LDIBBJCO_01882 3.1e-60 T Diguanylate cyclase, GGDEF domain
LDIBBJCO_01883 9.1e-253 3.2.1.14 GH18 S Carbohydrate binding domain
LDIBBJCO_01884 0.0 M probably involved in cell wall
LDIBBJCO_01886 6.2e-47 4.1.1.44 L Cupin 2, conserved barrel domain protein
LDIBBJCO_01887 1e-185 S Membrane transport protein
LDIBBJCO_01888 6.4e-41 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
LDIBBJCO_01889 5.7e-110 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
LDIBBJCO_01891 2.9e-125 magIII L endonuclease III
LDIBBJCO_01892 1.8e-240 vbsD V MatE
LDIBBJCO_01893 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LDIBBJCO_01894 8.4e-108 P Protein of unknown function DUF47
LDIBBJCO_01895 7.2e-214 S Domain of unknown function (DUF4143)
LDIBBJCO_01896 9.6e-29 S Domain of unknown function (DUF4143)
LDIBBJCO_01897 2.6e-194 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
LDIBBJCO_01898 3.8e-67 K MerR family regulatory protein
LDIBBJCO_01899 8.4e-88 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LDIBBJCO_01900 2.5e-59 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LDIBBJCO_01901 5.9e-31 S Psort location CytoplasmicMembrane, score
LDIBBJCO_01903 5e-185 MA20_14895 S Conserved hypothetical protein 698
LDIBBJCO_01904 7.1e-147 rlrG K Bacterial regulatory helix-turn-helix protein, lysR family
LDIBBJCO_01905 3e-128 tmp1 S Domain of unknown function (DUF4391)
LDIBBJCO_01906 6.2e-232 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LDIBBJCO_01907 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LDIBBJCO_01908 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
LDIBBJCO_01909 9.3e-62 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LDIBBJCO_01910 1.1e-192 yocS S SBF-like CPA transporter family (DUF4137)
LDIBBJCO_01912 6.1e-196 ltaE 4.1.2.48 E Beta-eliminating lyase
LDIBBJCO_01913 8.9e-220 M Glycosyl transferase 4-like domain
LDIBBJCO_01914 4.3e-228 mtnE 2.6.1.83 E Aminotransferase class I and II
LDIBBJCO_01915 3.7e-222 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
LDIBBJCO_01916 3.3e-138 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
LDIBBJCO_01917 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
LDIBBJCO_01919 6.9e-64 S Predicted membrane protein (DUF2142)
LDIBBJCO_01920 5.2e-90 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
LDIBBJCO_01921 7.9e-47 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
LDIBBJCO_01922 2.5e-22 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
LDIBBJCO_01923 5.9e-191 M Glycosyltransferase like family 2
LDIBBJCO_01924 9.4e-119
LDIBBJCO_01925 4.2e-77 xylR GK ROK family
LDIBBJCO_01926 8.6e-167 xylB 1.1.1.57, 2.7.1.17 G Belongs to the FGGY kinase family
LDIBBJCO_01927 1.3e-81 G ABC-type sugar transport system periplasmic component
LDIBBJCO_01928 6.3e-120 G ATPases associated with a variety of cellular activities
LDIBBJCO_01929 5e-73 P branched-chain amino acid ABC transporter, permease protein
LDIBBJCO_01930 7.5e-59 G Branched-chain amino acid transport system / permease component
LDIBBJCO_01931 4.2e-45 5.3.1.27 G sugar phosphate isomerase involved in capsule formation
LDIBBJCO_01932 7.8e-235 glf 5.4.99.9 M UDP-galactopyranose mutase
LDIBBJCO_01933 7.9e-163
LDIBBJCO_01934 1.5e-119 S Domain of unknown function (DUF4190)
LDIBBJCO_01935 4e-158 fahA Q Fumarylacetoacetate (FAA) hydrolase family
LDIBBJCO_01936 2.3e-162 S Auxin Efflux Carrier
LDIBBJCO_01937 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
LDIBBJCO_01939 2e-216 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
LDIBBJCO_01940 6.3e-215 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
LDIBBJCO_01941 2.8e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LDIBBJCO_01942 3.9e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LDIBBJCO_01943 1.6e-49 P Binding-protein-dependent transport system inner membrane component
LDIBBJCO_01944 0.0 G N-terminal domain of (some) glycogen debranching enzymes
LDIBBJCO_01945 1.2e-130
LDIBBJCO_01946 3e-233 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
LDIBBJCO_01947 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LDIBBJCO_01948 7.6e-263 S Calcineurin-like phosphoesterase
LDIBBJCO_01949 1.4e-139 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
LDIBBJCO_01950 1.3e-273 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LDIBBJCO_01951 3.2e-132 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LDIBBJCO_01952 2.1e-18 S Bacterial PH domain
LDIBBJCO_01953 2.8e-21 2.7.13.3 T Histidine kinase
LDIBBJCO_01954 1.8e-220 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
LDIBBJCO_01955 1e-131 yxeO 3.6.3.21 E ATPases associated with a variety of cellular activities
LDIBBJCO_01956 3e-104 S L-2-amino-thiazoline-4-carboxylic acid hydrolase
LDIBBJCO_01957 1.2e-138 P Binding-protein-dependent transport system inner membrane component
LDIBBJCO_01958 3.7e-120 ytmL P Binding-protein-dependent transport system inner membrane component
LDIBBJCO_01959 7.9e-157 ET Bacterial periplasmic substrate-binding proteins
LDIBBJCO_01960 8.7e-251 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
LDIBBJCO_01961 6.8e-256 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LDIBBJCO_01962 8e-222 G Transmembrane secretion effector
LDIBBJCO_01963 8.1e-131 K Bacterial regulatory proteins, tetR family
LDIBBJCO_01964 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
LDIBBJCO_01965 1.7e-301 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
LDIBBJCO_01966 3e-55 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
LDIBBJCO_01967 5.6e-54 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
LDIBBJCO_01968 2.8e-238 hom 1.1.1.3 E Homoserine dehydrogenase
LDIBBJCO_01969 3.4e-187 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
LDIBBJCO_01970 1.7e-276 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
LDIBBJCO_01971 2e-91 K Acetyltransferase (GNAT) family
LDIBBJCO_01972 1.6e-28 S Protein of unknown function (DUF1778)
LDIBBJCO_01973 1.7e-134 V ATPases associated with a variety of cellular activities
LDIBBJCO_01974 1.2e-253 V Efflux ABC transporter, permease protein
LDIBBJCO_01975 1.2e-191 K Bacterial regulatory proteins, lacI family
LDIBBJCO_01976 1.1e-250 4.2.1.68 M Enolase C-terminal domain-like
LDIBBJCO_01977 2.8e-148 IQ KR domain
LDIBBJCO_01978 2e-201 fucP G Major Facilitator Superfamily
LDIBBJCO_01979 4.2e-149 S Amidohydrolase
LDIBBJCO_01980 5.7e-166 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
LDIBBJCO_01981 1.9e-167 mdcF S Transporter, auxin efflux carrier (AEC) family protein
LDIBBJCO_01982 6.2e-232 dapE 3.5.1.18 E Peptidase dimerisation domain
LDIBBJCO_01983 0.0 rne 3.1.26.12 J Ribonuclease E/G family
LDIBBJCO_01984 1.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
LDIBBJCO_01985 5.8e-39 rpmA J Ribosomal L27 protein
LDIBBJCO_01986 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
LDIBBJCO_01987 3.6e-174 3.4.22.70 M Sortase family
LDIBBJCO_01988 0.0 M domain protein
LDIBBJCO_01989 0.0 M cell wall anchor domain protein
LDIBBJCO_01990 2.3e-187 K Psort location Cytoplasmic, score
LDIBBJCO_01991 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
LDIBBJCO_01992 1.9e-112 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LDIBBJCO_01993 2.4e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LDIBBJCO_01994 1.4e-251 yhjE EGP Sugar (and other) transporter
LDIBBJCO_01995 2.8e-180 K helix_turn _helix lactose operon repressor
LDIBBJCO_01996 1.7e-277 scrT G Transporter major facilitator family protein
LDIBBJCO_01997 4e-300 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
LDIBBJCO_01999 1.3e-199 K helix_turn _helix lactose operon repressor
LDIBBJCO_02000 1.9e-57 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LDIBBJCO_02001 1.9e-147 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LDIBBJCO_02002 4.1e-281 clcA P Voltage gated chloride channel
LDIBBJCO_02003 3.4e-252 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LDIBBJCO_02004 6.1e-199 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
LDIBBJCO_02005 2.3e-173 yicL EG EamA-like transporter family
LDIBBJCO_02007 3.4e-169 htpX O Belongs to the peptidase M48B family
LDIBBJCO_02008 2.6e-277 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
LDIBBJCO_02009 0.0 cadA P E1-E2 ATPase
LDIBBJCO_02010 8.4e-263 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
LDIBBJCO_02011 1.1e-258 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
LDIBBJCO_02013 1.7e-146 yplQ S Haemolysin-III related
LDIBBJCO_02014 1.7e-51 ybjQ S Putative heavy-metal-binding
LDIBBJCO_02015 2.4e-74 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
LDIBBJCO_02016 0.0 KL Domain of unknown function (DUF3427)
LDIBBJCO_02017 1.7e-164 M Glycosyltransferase like family 2
LDIBBJCO_02018 6.7e-198 S Fic/DOC family
LDIBBJCO_02019 6.3e-131 S Pyridoxamine 5'-phosphate oxidase
LDIBBJCO_02020 1.4e-200 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LDIBBJCO_02021 0.0 lysX S Uncharacterised conserved protein (DUF2156)
LDIBBJCO_02022 1.2e-255 S Putative esterase
LDIBBJCO_02023 1.1e-22
LDIBBJCO_02024 3.9e-176 yddG EG EamA-like transporter family
LDIBBJCO_02025 3.3e-86 hsp20 O Hsp20/alpha crystallin family
LDIBBJCO_02026 2.6e-94 pldB 3.1.1.5 I Serine aminopeptidase, S33
LDIBBJCO_02027 3.6e-148 L IstB-like ATP binding protein
LDIBBJCO_02028 9.8e-296 L PFAM Integrase catalytic
LDIBBJCO_02029 5.4e-172 1.1.1.339 GM NAD dependent epimerase/dehydratase family
LDIBBJCO_02030 1.9e-189 I Acyltransferase family
LDIBBJCO_02031 0.0 rgpF M Rhamnan synthesis protein F
LDIBBJCO_02032 1.7e-249 S Polysaccharide pyruvyl transferase
LDIBBJCO_02033 2.4e-271 S Glucosyl transferase GtrII
LDIBBJCO_02034 1e-229 rgpD 3.6.3.38, 3.6.3.40 GM ABC transporter, ATP-binding protein
LDIBBJCO_02035 2.7e-149 rgpC U Transport permease protein
LDIBBJCO_02036 7.9e-204 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
LDIBBJCO_02037 3.4e-261 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
LDIBBJCO_02038 1.1e-172 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LDIBBJCO_02039 6.4e-228 lytC 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
LDIBBJCO_02040 1.6e-16
LDIBBJCO_02041 6.4e-188 K Cell envelope-related transcriptional attenuator domain
LDIBBJCO_02042 1.7e-255 V ABC transporter permease
LDIBBJCO_02043 8.1e-184 V ABC transporter
LDIBBJCO_02044 3.4e-143 T HD domain
LDIBBJCO_02045 4.2e-161 S Glutamine amidotransferase domain
LDIBBJCO_02046 0.0 kup P Transport of potassium into the cell
LDIBBJCO_02047 5.3e-186 tatD L TatD related DNase
LDIBBJCO_02048 0.0 yknV V ABC transporter
LDIBBJCO_02049 0.0 mdlA2 V ABC transporter
LDIBBJCO_02050 2.3e-23 S ATPase domain predominantly from Archaea
LDIBBJCO_02051 1.1e-253 S Domain of unknown function (DUF4143)
LDIBBJCO_02052 1e-43 G Glycosyl hydrolases family 43
LDIBBJCO_02053 0.0 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
LDIBBJCO_02054 1.7e-177 E Belongs to the ABC transporter superfamily
LDIBBJCO_02055 3.2e-173 dppC EP N-terminal TM domain of oligopeptide transport permease C
LDIBBJCO_02056 1e-176 appB EP Binding-protein-dependent transport system inner membrane component
LDIBBJCO_02057 5.1e-276 pepC 3.4.22.40 E Peptidase C1-like family
LDIBBJCO_02058 6.7e-47
LDIBBJCO_02059 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LDIBBJCO_02060 9.4e-121
LDIBBJCO_02061 9.1e-184 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LDIBBJCO_02063 3.8e-257 G MFS/sugar transport protein
LDIBBJCO_02064 1.1e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
LDIBBJCO_02065 0.0 lmrA2 V ABC transporter transmembrane region
LDIBBJCO_02066 0.0 lmrA1 V ABC transporter, ATP-binding protein
LDIBBJCO_02067 7.9e-91 ydgJ K helix_turn_helix multiple antibiotic resistance protein
LDIBBJCO_02068 6.5e-09 ydcK 5.4.2.9 JM Carbohydrate binding module (family 6)
LDIBBJCO_02069 6.6e-10 ydcK 3.2.1.23, 5.4.2.9 JM Carbohydrate binding module (family 6)
LDIBBJCO_02070 3.8e-89 L Transposase
LDIBBJCO_02071 1.4e-28 L Transposase
LDIBBJCO_02072 1.5e-69 maa 2.3.1.18, 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
LDIBBJCO_02073 7.3e-13 maa 2.3.1.18, 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
LDIBBJCO_02074 2.6e-197 K helix_turn _helix lactose operon repressor
LDIBBJCO_02075 1.4e-144
LDIBBJCO_02076 0.0 3.2.1.23 G Glycosyl hydrolases family 35
LDIBBJCO_02077 2.7e-134 3.6.3.17 U Branched-chain amino acid transport system / permease component
LDIBBJCO_02078 4.9e-290 3.6.3.17 G ATPases associated with a variety of cellular activities
LDIBBJCO_02079 1.5e-201 G Periplasmic binding protein domain
LDIBBJCO_02080 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LDIBBJCO_02081 4.4e-167 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LDIBBJCO_02082 1.9e-68 rbsD 5.4.99.62 G RbsD / FucU transport protein family
LDIBBJCO_02083 1.8e-162 rbsB G Periplasmic binding protein domain
LDIBBJCO_02084 4.9e-158 rbsC U Branched-chain amino acid transport system / permease component
LDIBBJCO_02085 4.7e-277 rbsA 3.6.3.17 G ATPases associated with a variety of cellular activities
LDIBBJCO_02086 2.6e-186 rbsR K helix_turn _helix lactose operon repressor
LDIBBJCO_02087 1.4e-95 L Transposase
LDIBBJCO_02089 9.7e-24 L Transposase DDE domain

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)