ORF_ID e_value Gene_name EC_number CAZy COGs Description
LDCKNKGH_00001 1.5e-200 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LDCKNKGH_00002 3.8e-207 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
LDCKNKGH_00003 2.2e-34 yaaA S S4 domain protein YaaA
LDCKNKGH_00004 1.5e-203 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LDCKNKGH_00005 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LDCKNKGH_00006 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LDCKNKGH_00007 3.6e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
LDCKNKGH_00008 6.4e-91 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
LDCKNKGH_00009 2.1e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LDCKNKGH_00010 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
LDCKNKGH_00011 1.2e-74 rplI J Binds to the 23S rRNA
LDCKNKGH_00012 5.3e-243 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
LDCKNKGH_00013 9e-127 lmrP E Major Facilitator Superfamily
LDCKNKGH_00014 1.6e-66 lmrP E Major Facilitator Superfamily
LDCKNKGH_00015 1.8e-49
LDCKNKGH_00017 6.8e-130 K response regulator
LDCKNKGH_00018 0.0 vicK 2.7.13.3 T Histidine kinase
LDCKNKGH_00019 6.7e-240 yycH S YycH protein
LDCKNKGH_00020 8e-143 yycI S YycH protein
LDCKNKGH_00021 6e-154 vicX 3.1.26.11 S domain protein
LDCKNKGH_00022 3e-208 htrA 3.4.21.107 O serine protease
LDCKNKGH_00023 8.9e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LDCKNKGH_00024 9.7e-71 K Transcriptional regulator
LDCKNKGH_00025 4.1e-175 malR K Transcriptional regulator, LacI family
LDCKNKGH_00026 2.8e-249 malT G Major Facilitator
LDCKNKGH_00027 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
LDCKNKGH_00028 1.4e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
LDCKNKGH_00029 2.5e-110 ysdA CP transmembrane transport
LDCKNKGH_00030 6.2e-190 pacA 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
LDCKNKGH_00031 1.4e-183 D Alpha beta
LDCKNKGH_00032 3.5e-180 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LDCKNKGH_00033 6.5e-218 patA 2.6.1.1 E Aminotransferase
LDCKNKGH_00034 2.7e-35
LDCKNKGH_00035 0.0 clpL O associated with various cellular activities
LDCKNKGH_00036 8.8e-281 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LDCKNKGH_00037 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
LDCKNKGH_00038 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
LDCKNKGH_00039 2.6e-163 yvgN C Aldo keto reductase
LDCKNKGH_00040 5e-293 glpQ 3.1.4.46 C phosphodiesterase
LDCKNKGH_00041 1.7e-65 arsC 1.20.4.1 P Belongs to the ArsC family
LDCKNKGH_00042 1.6e-189 ybhR V ABC transporter
LDCKNKGH_00043 1.5e-127 ybhF_2 V AAA domain, putative AbiEii toxin, Type IV TA system
LDCKNKGH_00044 1.1e-93 K transcriptional regulator
LDCKNKGH_00045 2.4e-44 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
LDCKNKGH_00046 2.3e-96 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
LDCKNKGH_00047 1.2e-249 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LDCKNKGH_00048 1.5e-258 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
LDCKNKGH_00049 1.9e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
LDCKNKGH_00050 2.4e-130 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
LDCKNKGH_00051 3.2e-115 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LDCKNKGH_00052 1.8e-167 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
LDCKNKGH_00053 6.9e-47
LDCKNKGH_00054 1.9e-273 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
LDCKNKGH_00055 1.3e-260 tagE2 2.4.1.52 GT4 M Poly(Glycerol-phosphate) alpha-glucosyltransferase
LDCKNKGH_00056 2.7e-149 metQ1 P Belongs to the nlpA lipoprotein family
LDCKNKGH_00057 6.1e-191 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LDCKNKGH_00058 5.8e-97 metI P ABC transporter permease
LDCKNKGH_00059 4.1e-217 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
LDCKNKGH_00060 3.1e-246 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LDCKNKGH_00061 3.3e-45 L Transposase IS200 like
LDCKNKGH_00062 2.6e-227 L transposase, IS605 OrfB family
LDCKNKGH_00063 9.7e-65 iolS C Aldo keto reductase
LDCKNKGH_00064 2.3e-240 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
LDCKNKGH_00065 3.6e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LDCKNKGH_00066 9.7e-241 dltB M MBOAT, membrane-bound O-acyltransferase family
LDCKNKGH_00067 8.3e-298 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LDCKNKGH_00069 7.4e-219 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
LDCKNKGH_00070 0.0 sbcC L Putative exonuclease SbcCD, C subunit
LDCKNKGH_00071 2.8e-230 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LDCKNKGH_00073 3.2e-189 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
LDCKNKGH_00075 6.8e-225 glnP P ABC transporter
LDCKNKGH_00076 1.1e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
LDCKNKGH_00077 1.5e-250 cycA E Amino acid permease
LDCKNKGH_00078 4.2e-239 L transposase, IS605 OrfB family
LDCKNKGH_00079 1.1e-80 tlpA2 L Transposase IS200 like
LDCKNKGH_00080 6.4e-213 nupG F Nucleoside transporter
LDCKNKGH_00081 1.8e-23 rihC 3.2.2.1 F Nucleoside
LDCKNKGH_00082 1.1e-111 rihC 3.2.2.1 F Nucleoside
LDCKNKGH_00083 2e-132 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
LDCKNKGH_00084 9.6e-156 noc K Belongs to the ParB family
LDCKNKGH_00085 9.5e-147 spo0J K Belongs to the ParB family
LDCKNKGH_00086 2.3e-30 yyzM S Bacterial protein of unknown function (DUF951)
LDCKNKGH_00087 2e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
LDCKNKGH_00088 1.7e-134 XK27_01040 S Protein of unknown function (DUF1129)
LDCKNKGH_00089 4.5e-208 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
LDCKNKGH_00090 5.3e-206 L Transposase
LDCKNKGH_00091 1.2e-167 brpA K Cell envelope-like function transcriptional attenuator common domain protein
LDCKNKGH_00092 9.4e-133 epsB M biosynthesis protein
LDCKNKGH_00094 5.7e-138 ywqE 3.1.3.48 GM PHP domain protein
LDCKNKGH_00095 2.1e-227 tnp L MULE transposase domain
LDCKNKGH_00096 4.8e-93 S Cupin superfamily (DUF985)
LDCKNKGH_00097 9.4e-124 K response regulator
LDCKNKGH_00098 3.5e-208 hpk31 2.7.13.3 T Histidine kinase
LDCKNKGH_00099 3.4e-204 dacA 3.4.16.4 M Belongs to the peptidase S11 family
LDCKNKGH_00100 1.2e-60 azlD S branched-chain amino acid
LDCKNKGH_00101 3.1e-10 K transcriptional regulator
LDCKNKGH_00102 1.8e-163 K AI-2E family transporter
LDCKNKGH_00103 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
LDCKNKGH_00104 1.8e-81 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LDCKNKGH_00105 1.2e-216 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LDCKNKGH_00106 3.3e-255 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LDCKNKGH_00107 2e-170 hrpQ 4.6.1.1 T histone H2A K63-linked ubiquitination
LDCKNKGH_00108 3.7e-237 S response to antibiotic
LDCKNKGH_00109 2.5e-135 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
LDCKNKGH_00110 3e-37 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LDCKNKGH_00111 1.6e-128 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LDCKNKGH_00112 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LDCKNKGH_00113 5.7e-280 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LDCKNKGH_00114 9.5e-197 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
LDCKNKGH_00115 2.3e-107 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LDCKNKGH_00116 4.3e-294 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
LDCKNKGH_00117 1.7e-240 purD 6.3.4.13 F Belongs to the GARS family
LDCKNKGH_00118 9.2e-21 L transposase, IS605 OrfB family
LDCKNKGH_00119 1.7e-44 L Transposase IS200 like
LDCKNKGH_00120 1.6e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LDCKNKGH_00121 5.1e-223 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
LDCKNKGH_00122 7.3e-178
LDCKNKGH_00123 8.5e-47 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
LDCKNKGH_00124 5e-53 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
LDCKNKGH_00125 0.0 copA 3.6.3.54 P P-type ATPase
LDCKNKGH_00126 7.2e-29 EGP Major facilitator Superfamily
LDCKNKGH_00127 4.7e-90 2.4.2.6 F nucleoside 2-deoxyribosyltransferase
LDCKNKGH_00128 9.8e-77
LDCKNKGH_00130 7.8e-120 pnb C nitroreductase
LDCKNKGH_00131 1.2e-76 S Alpha/beta hydrolase family
LDCKNKGH_00132 1.1e-38 C Aldo keto reductase
LDCKNKGH_00136 3.1e-93 P Cadmium resistance transporter
LDCKNKGH_00137 3.9e-31 ydzE EG spore germination
LDCKNKGH_00138 1.5e-53 4.1.1.44 O Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LDCKNKGH_00139 1.3e-33 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
LDCKNKGH_00140 2.9e-45
LDCKNKGH_00141 4.2e-08 isdH M Iron Transport-associated domain
LDCKNKGH_00142 2.1e-118 isdH M Iron Transport-associated domain
LDCKNKGH_00143 1e-94 M Iron Transport-associated domain
LDCKNKGH_00144 2.8e-149 isdE P Periplasmic binding protein
LDCKNKGH_00145 4.9e-152 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LDCKNKGH_00146 5.4e-141 fhuC 3.6.3.34 HP ABC transporter, ATP-binding protein
LDCKNKGH_00147 2.9e-235 kgtP EGP Sugar (and other) transporter
LDCKNKGH_00149 4.9e-159 xth 3.1.11.2 L exodeoxyribonuclease III
LDCKNKGH_00150 1.7e-76
LDCKNKGH_00151 2.6e-180 1.1.1.26 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LDCKNKGH_00152 8.9e-27 pucG 2.6.1.112, 2.6.1.44, 2.6.1.45, 2.6.1.51 E Aminotransferase class-V
LDCKNKGH_00153 1.1e-37 pucG 2.6.1.112, 2.6.1.44, 2.6.1.45, 2.6.1.51 E Aminotransferase class-V
LDCKNKGH_00154 1.2e-21 pucG 2.6.1.112, 2.6.1.44, 2.6.1.45, 2.6.1.51 E Aminotransferase class-V
LDCKNKGH_00155 3.4e-64 pucR QT Purine catabolism regulatory protein-like family
LDCKNKGH_00156 3.7e-135 allB 3.5.2.5 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
LDCKNKGH_00157 4.8e-190 L Helix-turn-helix domain
LDCKNKGH_00158 4.4e-49 ylbA 3.5.3.26 S protein, possibly involved in glyoxylate utilization
LDCKNKGH_00159 1.8e-203 allD 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
LDCKNKGH_00160 2.4e-10 sucD 6.2.1.5 C CoA-ligase
LDCKNKGH_00161 1.7e-176 rihA 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
LDCKNKGH_00162 3e-124 C nitroreductase
LDCKNKGH_00163 4.6e-137 E GDSL-like Lipase/Acylhydrolase family
LDCKNKGH_00164 2.3e-53 S Mazg nucleotide pyrophosphohydrolase
LDCKNKGH_00165 8.1e-196 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
LDCKNKGH_00166 0.0 pepN 3.4.11.2 E aminopeptidase
LDCKNKGH_00167 1.9e-59 K Transcriptional regulator
LDCKNKGH_00168 6e-25 phaG GT1 I carboxylic ester hydrolase activity
LDCKNKGH_00169 1e-139 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
LDCKNKGH_00171 2.2e-81 tlpA2 L Transposase IS200 like
LDCKNKGH_00172 4.6e-238 L transposase, IS605 OrfB family
LDCKNKGH_00173 7.4e-155 metQ_4 P Belongs to the nlpA lipoprotein family
LDCKNKGH_00174 1.2e-203 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
LDCKNKGH_00175 0.0 helD 3.6.4.12 L DNA helicase
LDCKNKGH_00176 6.6e-173 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
LDCKNKGH_00177 1.5e-220 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
LDCKNKGH_00178 2.2e-187
LDCKNKGH_00179 9.8e-129 cobB K SIR2 family
LDCKNKGH_00180 7e-212 norA EGP Major facilitator Superfamily
LDCKNKGH_00181 9.5e-163 yunF F Protein of unknown function DUF72
LDCKNKGH_00182 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LDCKNKGH_00183 1.8e-147 tatD L hydrolase, TatD family
LDCKNKGH_00184 5.6e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LDCKNKGH_00185 2.5e-161 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
LDCKNKGH_00186 6.5e-159 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
LDCKNKGH_00187 1.2e-166 znuA P Belongs to the bacterial solute-binding protein 9 family
LDCKNKGH_00188 1.6e-94 fhuC P ABC transporter
LDCKNKGH_00189 3.2e-128 znuB U ABC 3 transport family
LDCKNKGH_00190 7.5e-152 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
LDCKNKGH_00191 7.3e-205 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LDCKNKGH_00192 6.1e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LDCKNKGH_00193 1.2e-31
LDCKNKGH_00194 4.8e-143 yxeH S hydrolase
LDCKNKGH_00195 5.7e-266 ywfO S HD domain protein
LDCKNKGH_00196 3.2e-74 ywiB S Domain of unknown function (DUF1934)
LDCKNKGH_00197 1.6e-47 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
LDCKNKGH_00198 1.1e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
LDCKNKGH_00199 2.3e-237 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LDCKNKGH_00200 6e-41 rpmE2 J Ribosomal protein L31
LDCKNKGH_00201 3.3e-29 mdtG EGP Major facilitator Superfamily
LDCKNKGH_00202 4.7e-123 srtA 3.4.22.70 M sortase family
LDCKNKGH_00203 2.5e-18 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LDCKNKGH_00204 8.7e-88 lemA S LemA family
LDCKNKGH_00205 4.9e-157 htpX O Belongs to the peptidase M48B family
LDCKNKGH_00206 6.2e-260 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
LDCKNKGH_00207 1.9e-254 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
LDCKNKGH_00208 2.9e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
LDCKNKGH_00209 2.8e-210 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LDCKNKGH_00210 5e-57 L Toxic component of a toxin-antitoxin (TA) module
LDCKNKGH_00211 8.1e-114 S (CBS) domain
LDCKNKGH_00212 9.6e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
LDCKNKGH_00213 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LDCKNKGH_00214 1.6e-39 yabO J S4 domain protein
LDCKNKGH_00215 1.5e-56 divIC D Septum formation initiator
LDCKNKGH_00216 3e-87 yabR J RNA binding
LDCKNKGH_00217 1.4e-256 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
LDCKNKGH_00218 4.1e-98 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
LDCKNKGH_00219 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LDCKNKGH_00220 2.6e-163 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
LDCKNKGH_00221 3.2e-189 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LDCKNKGH_00222 2.8e-290 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
LDCKNKGH_00225 9.8e-77
LDCKNKGH_00230 7.3e-08
LDCKNKGH_00231 4.8e-99 S D5 N terminal like
LDCKNKGH_00232 4.7e-146 L DNA replication protein
LDCKNKGH_00235 2.5e-07 S Helix-turn-helix domain
LDCKNKGH_00236 8.8e-160 K Helix-turn-helix XRE-family like proteins
LDCKNKGH_00237 2.2e-171 L transposase, IS605 OrfB family
LDCKNKGH_00238 2.7e-164 D nuclear chromosome segregation
LDCKNKGH_00239 3.4e-256 dtpT U amino acid peptide transporter
LDCKNKGH_00240 2.1e-165 yjjH S Calcineurin-like phosphoesterase
LDCKNKGH_00243 3.3e-115
LDCKNKGH_00244 4.3e-132 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
LDCKNKGH_00245 1.4e-127 gntR1 K UbiC transcription regulator-associated domain protein
LDCKNKGH_00246 1.1e-283 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LDCKNKGH_00247 8.8e-153 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
LDCKNKGH_00248 0.0 yhgF K Tex-like protein N-terminal domain protein
LDCKNKGH_00249 2.4e-83 ydcK S Belongs to the SprT family
LDCKNKGH_00251 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
LDCKNKGH_00252 1.8e-189 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
LDCKNKGH_00253 2.3e-168 mleP2 S Sodium Bile acid symporter family
LDCKNKGH_00254 1.2e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LDCKNKGH_00255 1.3e-167 I alpha/beta hydrolase fold
LDCKNKGH_00256 4e-264 pepC 3.4.22.40 E Peptidase C1-like family
LDCKNKGH_00257 5.3e-94 maa 2.3.1.18, 2.3.1.79 S Transferase hexapeptide repeat
LDCKNKGH_00258 9e-110 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LDCKNKGH_00259 1.4e-98 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
LDCKNKGH_00260 5.6e-253 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LDCKNKGH_00261 2.7e-205 yacL S domain protein
LDCKNKGH_00262 9.6e-291 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LDCKNKGH_00263 7.8e-100 ywlG S Belongs to the UPF0340 family
LDCKNKGH_00264 6.5e-273 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
LDCKNKGH_00265 5.5e-71 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
LDCKNKGH_00266 1.5e-135 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LDCKNKGH_00267 1.1e-104 sigH K Belongs to the sigma-70 factor family
LDCKNKGH_00268 3.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
LDCKNKGH_00269 2.4e-23 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
LDCKNKGH_00270 5.9e-97 nusG K Participates in transcription elongation, termination and antitermination
LDCKNKGH_00271 2.2e-51 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LDCKNKGH_00272 5.7e-121 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
LDCKNKGH_00273 1.7e-243 steT E amino acid
LDCKNKGH_00274 8.4e-82 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LDCKNKGH_00275 4.6e-53 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
LDCKNKGH_00276 1.5e-272 cydA 1.10.3.14 C ubiquinol oxidase
LDCKNKGH_00277 4.1e-176 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
LDCKNKGH_00278 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
LDCKNKGH_00279 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LDCKNKGH_00280 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
LDCKNKGH_00281 4.6e-247 brnQ U Component of the transport system for branched-chain amino acids
LDCKNKGH_00282 8.6e-195 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LDCKNKGH_00283 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LDCKNKGH_00284 2e-35 nrdH O Glutaredoxin
LDCKNKGH_00285 1.8e-79 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
LDCKNKGH_00287 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LDCKNKGH_00288 4.9e-40 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LDCKNKGH_00289 3e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LDCKNKGH_00290 2.4e-21 S Protein of unknown function (DUF2508)
LDCKNKGH_00291 6e-117 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LDCKNKGH_00292 1.2e-52 yaaQ S Cyclic-di-AMP receptor
LDCKNKGH_00293 4.9e-193 holB 2.7.7.7 L DNA polymerase III
LDCKNKGH_00294 7.6e-55 yabA L Involved in initiation control of chromosome replication
LDCKNKGH_00295 1.2e-157 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LDCKNKGH_00296 3.3e-146 fat 3.1.2.21 I Acyl-ACP thioesterase
LDCKNKGH_00297 1.1e-281 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
LDCKNKGH_00298 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LDCKNKGH_00299 2.3e-173 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
LDCKNKGH_00300 1e-192 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
LDCKNKGH_00301 6.7e-148 KT YcbB domain
LDCKNKGH_00302 6e-188 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LDCKNKGH_00303 1.4e-167 arcC 2.7.2.2 E Belongs to the carbamate kinase family
LDCKNKGH_00304 8.2e-240 arcA 3.5.3.6 E Arginine
LDCKNKGH_00305 1.4e-259 E Arginine ornithine antiporter
LDCKNKGH_00306 1.1e-219 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
LDCKNKGH_00307 6.4e-215 arcT 2.6.1.1 E Aminotransferase
LDCKNKGH_00308 5.8e-132 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
LDCKNKGH_00309 3.9e-110 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
LDCKNKGH_00310 1.2e-194 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LDCKNKGH_00312 2.7e-76 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
LDCKNKGH_00313 8.7e-75 marR K Transcriptional regulator, MarR family
LDCKNKGH_00314 2.2e-171 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LDCKNKGH_00315 4.2e-34 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
LDCKNKGH_00316 2.8e-171 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
LDCKNKGH_00317 1e-128 IQ reductase
LDCKNKGH_00318 6e-230 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
LDCKNKGH_00319 5.9e-63 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
LDCKNKGH_00320 1.3e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
LDCKNKGH_00321 4.6e-263 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
LDCKNKGH_00322 1.5e-160 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
LDCKNKGH_00323 1e-139 accA 2.1.3.15, 6.4.1.2 I alpha subunit
LDCKNKGH_00324 1e-134 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
LDCKNKGH_00325 9.7e-92 bioY S BioY family
LDCKNKGH_00326 5.6e-175 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
LDCKNKGH_00327 0.0 uup S ABC transporter, ATP-binding protein
LDCKNKGH_00328 4.4e-115 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
LDCKNKGH_00329 7.4e-43 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
LDCKNKGH_00330 4.7e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
LDCKNKGH_00331 0.0 ydaO E amino acid
LDCKNKGH_00332 1.9e-37
LDCKNKGH_00333 9e-113 yvyE 3.4.13.9 S YigZ family
LDCKNKGH_00334 2.9e-251 comFA L Helicase C-terminal domain protein
LDCKNKGH_00335 2.1e-128 comFC S Competence protein
LDCKNKGH_00336 6.5e-96 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LDCKNKGH_00337 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
LDCKNKGH_00338 4.5e-202 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
LDCKNKGH_00339 4.1e-53 KT PspC domain protein
LDCKNKGH_00340 1.2e-47 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
LDCKNKGH_00341 1.2e-177 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
LDCKNKGH_00342 6.2e-162 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LDCKNKGH_00343 9e-184 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
LDCKNKGH_00344 2.1e-171 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
LDCKNKGH_00345 2.3e-147 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
LDCKNKGH_00346 2.9e-226 mtnE 2.6.1.83 E Aminotransferase
LDCKNKGH_00347 1.7e-187 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LDCKNKGH_00348 1.5e-76 yphH S Cupin domain
LDCKNKGH_00349 2.1e-91 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
LDCKNKGH_00350 2.8e-20 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
LDCKNKGH_00351 1.3e-153 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
LDCKNKGH_00352 2.6e-169 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
LDCKNKGH_00353 1.2e-196 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
LDCKNKGH_00354 6.2e-171 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
LDCKNKGH_00355 3.1e-136 cof S haloacid dehalogenase-like hydrolase
LDCKNKGH_00356 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
LDCKNKGH_00357 6.8e-113 yfbR S HD containing hydrolase-like enzyme
LDCKNKGH_00359 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
LDCKNKGH_00360 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
LDCKNKGH_00361 2.2e-204
LDCKNKGH_00362 3.2e-161 rapZ S Displays ATPase and GTPase activities
LDCKNKGH_00363 1.7e-187 ybhK S Required for morphogenesis under gluconeogenic growth conditions
LDCKNKGH_00364 1.2e-166 whiA K May be required for sporulation
LDCKNKGH_00365 2e-103 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LDCKNKGH_00366 1.3e-102 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LDCKNKGH_00370 1e-15
LDCKNKGH_00371 4.5e-191 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
LDCKNKGH_00372 6.6e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
LDCKNKGH_00373 3.1e-144 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
LDCKNKGH_00374 1e-248 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
LDCKNKGH_00375 1.5e-253 yifK E Amino acid permease
LDCKNKGH_00376 6.4e-290 clcA P chloride
LDCKNKGH_00377 4.5e-33 secG U Preprotein translocase
LDCKNKGH_00378 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
LDCKNKGH_00379 2.9e-84 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
LDCKNKGH_00380 5.5e-109 yxjI
LDCKNKGH_00381 2.8e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LDCKNKGH_00382 2.4e-178 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
LDCKNKGH_00383 2.9e-81 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
LDCKNKGH_00384 3.3e-89 K Acetyltransferase (GNAT) domain
LDCKNKGH_00385 1.3e-101 dnaQ 2.7.7.7 L DNA polymerase III
LDCKNKGH_00386 5.7e-166 murB 1.3.1.98 M Cell wall formation
LDCKNKGH_00387 7.8e-149 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
LDCKNKGH_00388 9.1e-116 ybbR S YbbR-like protein
LDCKNKGH_00389 4.2e-253 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LDCKNKGH_00390 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
LDCKNKGH_00391 1.5e-52
LDCKNKGH_00392 4.6e-68 oatA I Acyltransferase
LDCKNKGH_00393 9.7e-118 oatA I Acyltransferase
LDCKNKGH_00394 1.6e-151 XK27_02985 S Sucrose-6F-phosphate phosphohydrolase
LDCKNKGH_00395 8.1e-76 lytE M Lysin motif
LDCKNKGH_00396 9.2e-160 MA20_14895 S Conserved hypothetical protein 698
LDCKNKGH_00397 3.6e-168 K LysR substrate binding domain
LDCKNKGH_00398 1.9e-130 manA 5.3.1.8 G mannose-6-phosphate isomerase
LDCKNKGH_00399 1.7e-148 yitS S EDD domain protein, DegV family
LDCKNKGH_00400 6.5e-90 racA K Domain of unknown function (DUF1836)
LDCKNKGH_00401 2.3e-181 yfeX P Peroxidase
LDCKNKGH_00402 5.3e-181 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
LDCKNKGH_00403 6e-122 manY G PTS system
LDCKNKGH_00404 3e-170 manN G system, mannose fructose sorbose family IID component
LDCKNKGH_00405 1.2e-57 S Domain of unknown function (DUF956)
LDCKNKGH_00406 1.1e-214 tnp L MULE transposase domain
LDCKNKGH_00407 1.1e-23 L Helix-turn-helix domain
LDCKNKGH_00408 1.1e-166 L PFAM Integrase catalytic region
LDCKNKGH_00410 2.8e-131 K response regulator
LDCKNKGH_00411 1.3e-250 yclK 2.7.13.3 T Histidine kinase
LDCKNKGH_00412 4.5e-21 glcU U sugar transport
LDCKNKGH_00413 4.4e-118 glcU U sugar transport
LDCKNKGH_00414 1.1e-166 L PFAM Integrase catalytic region
LDCKNKGH_00415 1.1e-23 L Helix-turn-helix domain
LDCKNKGH_00416 6.1e-105 ahpC 1.11.1.15 O Peroxiredoxin
LDCKNKGH_00417 0.0 trxB2 1.8.1.9 C Thioredoxin domain
LDCKNKGH_00418 1.2e-255 pgi 5.3.1.9 G Belongs to the GPI family
LDCKNKGH_00420 1.6e-85 K GNAT family
LDCKNKGH_00421 6.1e-123 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
LDCKNKGH_00422 4e-161 ytbE 1.1.1.346 S Aldo keto reductase
LDCKNKGH_00423 6.3e-145 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
LDCKNKGH_00424 7.4e-132 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
LDCKNKGH_00426 1e-56
LDCKNKGH_00429 1.8e-78 K Winged helix DNA-binding domain
LDCKNKGH_00430 0.0 lmrA V ABC transporter, ATP-binding protein
LDCKNKGH_00431 0.0 yfiC V ABC transporter
LDCKNKGH_00432 2.8e-193 ampC V Beta-lactamase
LDCKNKGH_00433 6.4e-287 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LDCKNKGH_00434 8.2e-48
LDCKNKGH_00435 3.4e-140 cobQ S CobB/CobQ-like glutamine amidotransferase domain
LDCKNKGH_00436 7.5e-263 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
LDCKNKGH_00437 3.2e-109 tdk 2.7.1.21 F thymidine kinase
LDCKNKGH_00438 4.2e-155 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LDCKNKGH_00439 6.5e-159 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
LDCKNKGH_00440 2.3e-195 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
LDCKNKGH_00441 1.7e-229 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
LDCKNKGH_00442 1.2e-114 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LDCKNKGH_00443 3.3e-187 yibE S overlaps another CDS with the same product name
LDCKNKGH_00444 1.5e-125 yibF S overlaps another CDS with the same product name
LDCKNKGH_00445 5.4e-218 pyrP F Permease
LDCKNKGH_00446 5.8e-129 atpB C it plays a direct role in the translocation of protons across the membrane
LDCKNKGH_00447 1.2e-16 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LDCKNKGH_00448 3.7e-53 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LDCKNKGH_00449 7.4e-92 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LDCKNKGH_00450 1.4e-284 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LDCKNKGH_00451 2.3e-165 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LDCKNKGH_00452 4.4e-253 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LDCKNKGH_00453 6.4e-67 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
LDCKNKGH_00454 2.8e-29 S Protein of unknown function (DUF1146)
LDCKNKGH_00455 1.8e-218 murA 2.5.1.7 M EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
LDCKNKGH_00456 2.6e-183 mbl D Cell shape determining protein MreB Mrl
LDCKNKGH_00457 7.9e-32 S Protein of unknown function (DUF2969)
LDCKNKGH_00458 5.8e-222 rodA D Belongs to the SEDS family
LDCKNKGH_00460 5.3e-181 S Protein of unknown function (DUF2785)
LDCKNKGH_00461 7.7e-216 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
LDCKNKGH_00462 2.9e-151 2.3.1.19 K Helix-turn-helix XRE-family like proteins
LDCKNKGH_00463 2.3e-81 usp6 T universal stress protein
LDCKNKGH_00465 4.9e-235 rarA L recombination factor protein RarA
LDCKNKGH_00466 4.5e-85 yueI S Protein of unknown function (DUF1694)
LDCKNKGH_00467 1.3e-75 4.4.1.5 E Glyoxalase
LDCKNKGH_00468 2.4e-133 S Membrane
LDCKNKGH_00469 4.6e-149 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
LDCKNKGH_00471 1.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LDCKNKGH_00472 9.8e-308 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
LDCKNKGH_00473 2.9e-215 iscS2 2.8.1.7 E Aminotransferase class V
LDCKNKGH_00474 2.5e-228 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LDCKNKGH_00475 6.1e-209 EG GntP family permease
LDCKNKGH_00476 1.2e-203 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
LDCKNKGH_00477 7.4e-129 tra L EVIDENCE BY HOMOLOGY BIO14.04 Transposon related functions. BELONGS TO THE IS30 FAMILY OF TRANSPOSASE. There are 15 such elements in the chromosome
LDCKNKGH_00478 2.8e-44 L Transposase IS200 like
LDCKNKGH_00479 5.8e-146 L transposase, IS605 OrfB family
LDCKNKGH_00482 4.5e-88 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
LDCKNKGH_00483 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
LDCKNKGH_00484 1.9e-250 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
LDCKNKGH_00485 2.5e-115 radC L DNA repair protein
LDCKNKGH_00486 1.9e-181 mreB D cell shape determining protein MreB
LDCKNKGH_00487 3.7e-146 mreC M Involved in formation and maintenance of cell shape
LDCKNKGH_00488 2.5e-92 mreD M rod shape-determining protein MreD
LDCKNKGH_00489 1.4e-108 glnP P ABC transporter permease
LDCKNKGH_00490 2.5e-115 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
LDCKNKGH_00491 2.4e-161 aatB ET ABC transporter substrate-binding protein
LDCKNKGH_00492 4.3e-231 ymfF S Peptidase M16 inactive domain protein
LDCKNKGH_00493 1.1e-250 ymfH S Peptidase M16
LDCKNKGH_00494 1.8e-96 ymfM S Helix-turn-helix domain
LDCKNKGH_00495 8.5e-102 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LDCKNKGH_00496 1.9e-231 cinA 3.5.1.42 S Belongs to the CinA family
LDCKNKGH_00497 1.1e-192 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LDCKNKGH_00498 8.4e-205 rny S Endoribonuclease that initiates mRNA decay
LDCKNKGH_00499 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LDCKNKGH_00500 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
LDCKNKGH_00501 1.9e-104 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
LDCKNKGH_00502 2.9e-190 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
LDCKNKGH_00503 1.1e-175 2.4.2.29 F queuine tRNA-ribosyltransferase activity
LDCKNKGH_00504 2.1e-41 yajC U Preprotein translocase
LDCKNKGH_00505 3.4e-180 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
LDCKNKGH_00506 7.1e-232 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
LDCKNKGH_00507 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LDCKNKGH_00508 1.2e-42 yrzL S Belongs to the UPF0297 family
LDCKNKGH_00509 9.6e-74 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LDCKNKGH_00510 5.7e-33 yrzB S Belongs to the UPF0473 family
LDCKNKGH_00511 1.6e-163 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LDCKNKGH_00512 4.7e-91 cvpA S Colicin V production protein
LDCKNKGH_00513 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
LDCKNKGH_00514 1e-53 trxA O Belongs to the thioredoxin family
LDCKNKGH_00515 4.1e-226 clcA_2 P Chloride transporter, ClC family
LDCKNKGH_00516 3e-93 yslB S Protein of unknown function (DUF2507)
LDCKNKGH_00517 4.1e-147 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
LDCKNKGH_00518 3.6e-108 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LDCKNKGH_00519 8.8e-95 S Phosphoesterase
LDCKNKGH_00520 1.7e-151 3.1.3.102, 3.1.3.104, 3.1.3.23 S haloacid dehalogenase-like hydrolase
LDCKNKGH_00521 2e-155 ykuT M mechanosensitive ion channel
LDCKNKGH_00522 9.2e-26 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
LDCKNKGH_00523 4.9e-70
LDCKNKGH_00524 4.1e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
LDCKNKGH_00525 2.2e-185 ccpA K catabolite control protein A
LDCKNKGH_00526 3.6e-85
LDCKNKGH_00527 3.7e-134 yebC K Transcriptional regulatory protein
LDCKNKGH_00528 1.9e-83 mltD CBM50 M PFAM NLP P60 protein
LDCKNKGH_00529 0.0 ykcB M Dolichyl-phosphate-mannose-protein mannosyltransferase
LDCKNKGH_00530 2.7e-177 comGA NU Type II IV secretion system protein
LDCKNKGH_00531 3.6e-156 comGB NU type II secretion system
LDCKNKGH_00532 3.5e-12 NU general secretion pathway protein
LDCKNKGH_00534 2.9e-14
LDCKNKGH_00536 3.9e-159 ytxK 2.1.1.72 L N-6 DNA Methylase
LDCKNKGH_00537 9.5e-225 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LDCKNKGH_00538 1e-108 S Calcineurin-like phosphoesterase
LDCKNKGH_00539 1.2e-97 yutD S Protein of unknown function (DUF1027)
LDCKNKGH_00540 6.6e-142 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
LDCKNKGH_00541 7.5e-25 S Protein of unknown function (DUF1461)
LDCKNKGH_00542 2.9e-103 dedA S SNARE-like domain protein
LDCKNKGH_00543 9.8e-77
LDCKNKGH_00563 3.5e-16 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
LDCKNKGH_00564 1.7e-69 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
LDCKNKGH_00565 4.5e-113 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
LDCKNKGH_00566 9.4e-205 coiA 3.6.4.12 S Competence protein
LDCKNKGH_00567 1.8e-113 yjbH Q Thioredoxin
LDCKNKGH_00568 6e-123 yjbM 2.7.6.5 S RelA SpoT domain protein
LDCKNKGH_00569 1e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LDCKNKGH_00570 7e-172 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
LDCKNKGH_00571 6.8e-195 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
LDCKNKGH_00572 5.7e-163 rrmA 2.1.1.187 H Methyltransferase
LDCKNKGH_00573 6.7e-95 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
LDCKNKGH_00574 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
LDCKNKGH_00575 1.2e-07 S Protein of unknown function (DUF4044)
LDCKNKGH_00576 5.8e-58
LDCKNKGH_00577 5.6e-79 mraZ K Belongs to the MraZ family
LDCKNKGH_00578 4.3e-172 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
LDCKNKGH_00579 3.5e-08 ftsL D Cell division protein FtsL
LDCKNKGH_00580 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
LDCKNKGH_00581 9.1e-178 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LDCKNKGH_00582 4.3e-261 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LDCKNKGH_00583 2.8e-202 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LDCKNKGH_00584 8.4e-151 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
LDCKNKGH_00585 3.2e-224 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
LDCKNKGH_00586 5.8e-220 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LDCKNKGH_00587 2.5e-75 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
LDCKNKGH_00588 6.8e-41 yggT S YGGT family
LDCKNKGH_00589 2.9e-145 ylmH S S4 domain protein
LDCKNKGH_00590 4.8e-112 divIVA D DivIVA domain protein
LDCKNKGH_00592 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LDCKNKGH_00593 1.2e-32 cspB K Cold shock protein
LDCKNKGH_00594 7.7e-97 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
LDCKNKGH_00596 1.3e-125 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LDCKNKGH_00597 2.2e-57 XK27_04120 S Putative amino acid metabolism
LDCKNKGH_00598 2.9e-223 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
LDCKNKGH_00599 1.3e-306 S amidohydrolase
LDCKNKGH_00600 4e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
LDCKNKGH_00601 1.6e-120 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
LDCKNKGH_00602 7.1e-124 S Repeat protein
LDCKNKGH_00603 0.0 recD 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
LDCKNKGH_00604 9.4e-178 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LDCKNKGH_00605 4.2e-74 spx4 1.20.4.1 P ArsC family
LDCKNKGH_00606 9e-189 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic
LDCKNKGH_00607 2.2e-31 ykzG S Belongs to the UPF0356 family
LDCKNKGH_00608 1.2e-74
LDCKNKGH_00609 7.5e-103 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LDCKNKGH_00610 2.4e-49 yktA S Belongs to the UPF0223 family
LDCKNKGH_00611 1.1e-136 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
LDCKNKGH_00612 0.0 typA T GTP-binding protein TypA
LDCKNKGH_00613 4.4e-214 ftsW D Belongs to the SEDS family
LDCKNKGH_00614 8.8e-47 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
LDCKNKGH_00615 1.3e-99 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
LDCKNKGH_00616 9.6e-89 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LDCKNKGH_00617 1.1e-197 ylbL T Belongs to the peptidase S16 family
LDCKNKGH_00618 3.8e-90 comEA L Competence protein ComEA
LDCKNKGH_00619 3.4e-88 comEB 3.5.4.12 F ComE operon protein 2
LDCKNKGH_00620 0.0 comEC S Competence protein ComEC
LDCKNKGH_00621 4.1e-184 holA 2.7.7.7 L DNA polymerase III delta subunit
LDCKNKGH_00622 7.8e-188 L PFAM Integrase, catalytic core
LDCKNKGH_00623 2.3e-35 rpsT J Binds directly to 16S ribosomal RNA
LDCKNKGH_00624 4.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LDCKNKGH_00625 6.5e-262 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
LDCKNKGH_00626 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LDCKNKGH_00627 7.8e-163 S Tetratricopeptide repeat
LDCKNKGH_00628 3.3e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LDCKNKGH_00629 5.7e-215 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
LDCKNKGH_00630 1.5e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LDCKNKGH_00631 2.3e-107 engB D Necessary for normal cell division and for the maintenance of normal septation
LDCKNKGH_00632 8.3e-53 MA20_27270 S mazG nucleotide pyrophosphohydrolase
LDCKNKGH_00634 1.3e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
LDCKNKGH_00635 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
LDCKNKGH_00636 6.7e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LDCKNKGH_00637 8.3e-176 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
LDCKNKGH_00638 7.3e-155 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
LDCKNKGH_00639 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
LDCKNKGH_00640 2.4e-95 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LDCKNKGH_00641 2.8e-35 S Domain of unknown function (DUF4440)
LDCKNKGH_00642 8.6e-187 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LDCKNKGH_00643 3.3e-152 tesE Q hydratase
LDCKNKGH_00644 2.2e-96 ywrO S Flavodoxin-like fold
LDCKNKGH_00645 2.3e-44 S Protein conserved in bacteria
LDCKNKGH_00646 5.2e-56 1.14.99.57 S Antibiotic biosynthesis monooxygenase
LDCKNKGH_00647 6.2e-51 S Sugar efflux transporter for intercellular exchange
LDCKNKGH_00648 2.2e-191 EGP Major facilitator Superfamily
LDCKNKGH_00649 0.0 asnB 6.3.5.4 E Aluminium induced protein
LDCKNKGH_00650 3.4e-82 tlpA2 L Transposase IS200 like
LDCKNKGH_00651 2.1e-238 L transposase, IS605 OrfB family
LDCKNKGH_00655 1.8e-16 hbd2 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
LDCKNKGH_00656 5e-14
LDCKNKGH_00657 2.6e-183 scrR3 K Transcriptional regulator, LacI family
LDCKNKGH_00658 1.3e-78 F Nucleoside 2-deoxyribosyltransferase
LDCKNKGH_00659 3e-89
LDCKNKGH_00661 1.5e-39 L Transposase
LDCKNKGH_00662 5.1e-39 tnp L MULE transposase domain
LDCKNKGH_00663 1.5e-149 L Transposase and inactivated derivatives, IS30 family
LDCKNKGH_00664 1.1e-214 tnp L MULE transposase domain
LDCKNKGH_00665 1.4e-223 L Transposase
LDCKNKGH_00666 3.8e-19 L Transposase and inactivated derivatives
LDCKNKGH_00667 1.4e-30 L Transposase
LDCKNKGH_00668 1.1e-214 tnp L MULE transposase domain
LDCKNKGH_00669 9.5e-46 L Transposase
LDCKNKGH_00670 1.1e-225 L Transposase
LDCKNKGH_00671 5.2e-107 tnp L MULE transposase domain
LDCKNKGH_00672 1e-215 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
LDCKNKGH_00673 4.2e-115 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LDCKNKGH_00674 9.2e-37 ynzC S UPF0291 protein
LDCKNKGH_00675 2.7e-27 yneF S Uncharacterised protein family (UPF0154)
LDCKNKGH_00676 3.3e-115 plsC 2.3.1.51 I Acyltransferase
LDCKNKGH_00677 2.3e-136 yabB 2.1.1.223 L Methyltransferase small domain
LDCKNKGH_00678 2.3e-47 yazA L GIY-YIG catalytic domain protein
LDCKNKGH_00679 5e-142 rpsB J Belongs to the universal ribosomal protein uS2 family
LDCKNKGH_00680 4.9e-154 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LDCKNKGH_00681 7e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
LDCKNKGH_00682 4.1e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
LDCKNKGH_00683 1.3e-142 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LDCKNKGH_00684 2.3e-134 cdsA 2.7.7.41 I Belongs to the CDS family
LDCKNKGH_00685 1e-232 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
LDCKNKGH_00686 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
LDCKNKGH_00687 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LDCKNKGH_00688 4.1e-217 argD 2.6.1.11, 2.6.1.17 E acetylornithine
LDCKNKGH_00689 2.7e-137 argB 2.7.2.8 F Belongs to the acetylglutamate kinase family. ArgB subfamily
LDCKNKGH_00690 1.6e-199 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
LDCKNKGH_00691 1.1e-197 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
LDCKNKGH_00692 1.4e-206 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
LDCKNKGH_00693 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
LDCKNKGH_00694 3.3e-83 rimP J Required for maturation of 30S ribosomal subunits
LDCKNKGH_00695 8.3e-224 nusA K Participates in both transcription termination and antitermination
LDCKNKGH_00696 2.4e-47 ylxR K Protein of unknown function (DUF448)
LDCKNKGH_00697 3.2e-50 ylxQ J ribosomal protein
LDCKNKGH_00698 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LDCKNKGH_00699 4.2e-59 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LDCKNKGH_00700 6.8e-167 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LDCKNKGH_00701 1.6e-182 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
LDCKNKGH_00702 3e-246 EGP Major facilitator Superfamily
LDCKNKGH_00703 1.6e-55 L Helix-turn-helix domain
LDCKNKGH_00704 3.2e-253 G Major Facilitator
LDCKNKGH_00705 0.0 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
LDCKNKGH_00706 9.4e-178 K Transcriptional regulator, LacI family
LDCKNKGH_00707 9.7e-70 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
LDCKNKGH_00708 4.6e-09
LDCKNKGH_00709 2.7e-224 dhaT 1.1.1.1, 1.1.1.202 C Dehydrogenase
LDCKNKGH_00710 3.8e-97 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
LDCKNKGH_00711 3e-189 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LDCKNKGH_00712 4.9e-52 ypaA S Protein of unknown function (DUF1304)
LDCKNKGH_00713 5.8e-63 D Alpha beta
LDCKNKGH_00714 1e-40 L Integrase core domain
LDCKNKGH_00715 5.4e-62
LDCKNKGH_00716 1.3e-190 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
LDCKNKGH_00717 6.4e-57 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LDCKNKGH_00718 0.0 dnaK O Heat shock 70 kDa protein
LDCKNKGH_00719 1.1e-177 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
LDCKNKGH_00720 1.6e-54 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LDCKNKGH_00721 7.8e-08 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
LDCKNKGH_00722 1.1e-98 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
LDCKNKGH_00723 4.2e-55 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LDCKNKGH_00724 9.9e-52 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
LDCKNKGH_00725 2.8e-199 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LDCKNKGH_00726 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
LDCKNKGH_00727 3.3e-09
LDCKNKGH_00728 1.9e-112 3.1.3.73 G phosphoglycerate mutase
LDCKNKGH_00729 3.5e-111 C aldo keto reductase
LDCKNKGH_00730 8.3e-204 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
LDCKNKGH_00731 4.1e-220 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LDCKNKGH_00732 1.8e-272 K COG COG0846 NAD-dependent protein deacetylases, SIR2 family
LDCKNKGH_00734 8.7e-78 K 2 iron, 2 sulfur cluster binding
LDCKNKGH_00735 1.9e-80 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
LDCKNKGH_00736 5.9e-227 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
LDCKNKGH_00737 9.1e-107 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
LDCKNKGH_00738 6.5e-201 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LDCKNKGH_00739 3.5e-59 L hmm pf00665
LDCKNKGH_00740 1.8e-58 L Helix-turn-helix domain
LDCKNKGH_00741 1.6e-55 L Helix-turn-helix domain
LDCKNKGH_00742 9.4e-12 L hmm pf00665
LDCKNKGH_00743 7.4e-191 L Helix-turn-helix domain
LDCKNKGH_00744 9e-220 iscS 2.8.1.7 E Aminotransferase class V
LDCKNKGH_00746 2.2e-81 tlpA2 L Transposase IS200 like
LDCKNKGH_00747 4.8e-100 P Cadmium resistance transporter
LDCKNKGH_00748 3.2e-116 S Protein of unknown function (DUF554)
LDCKNKGH_00749 1.2e-102 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LDCKNKGH_00750 2.7e-157 P Belongs to the nlpA lipoprotein family
LDCKNKGH_00751 3.9e-98 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LDCKNKGH_00752 3.8e-38 V CAAX protease self-immunity
LDCKNKGH_00753 1.6e-68 psiE S Phosphate-starvation-inducible E
LDCKNKGH_00754 1.5e-149 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
LDCKNKGH_00755 3.4e-112 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
LDCKNKGH_00756 1.6e-143 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
LDCKNKGH_00757 8.9e-139 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
LDCKNKGH_00758 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LDCKNKGH_00759 1.5e-172 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
LDCKNKGH_00761 1.2e-54
LDCKNKGH_00762 1.8e-181 prmA J Ribosomal protein L11 methyltransferase
LDCKNKGH_00763 5.2e-136 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
LDCKNKGH_00764 4.4e-58
LDCKNKGH_00765 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LDCKNKGH_00766 2.4e-77 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
LDCKNKGH_00767 1.3e-84 slyA K Transcriptional regulator
LDCKNKGH_00768 9.2e-220 metC1 2.5.1.48, 4.4.1.8 E cystathionine
LDCKNKGH_00769 3.3e-211 metB 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
LDCKNKGH_00771 4.2e-113 papP P ABC transporter, permease protein
LDCKNKGH_00772 2e-115 P ABC transporter permease
LDCKNKGH_00773 1.1e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
LDCKNKGH_00774 6.9e-153 cjaA ET ABC transporter substrate-binding protein
LDCKNKGH_00775 2.6e-135 IQ KR domain
LDCKNKGH_00776 1.4e-139 hom1 1.1.1.3 E Homoserine dehydrogenase
LDCKNKGH_00777 3.5e-45 hom1 1.1.1.3 E Homoserine dehydrogenase
LDCKNKGH_00778 2.9e-156 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
LDCKNKGH_00779 2e-245 mmuP E amino acid
LDCKNKGH_00780 1.5e-172 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
LDCKNKGH_00781 5.2e-169 yniA G Phosphotransferase enzyme family
LDCKNKGH_00782 3.7e-174 lytH 3.5.1.28 M Ami_3
LDCKNKGH_00783 6.1e-196 6.3.1.20 H Lipoate-protein ligase
LDCKNKGH_00784 1.7e-248 hisS 6.1.1.21 J histidyl-tRNA synthetase
LDCKNKGH_00785 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
LDCKNKGH_00786 5.1e-130 yfeJ 6.3.5.2 F glutamine amidotransferase
LDCKNKGH_00787 5.7e-23 rpsU J Belongs to the bacterial ribosomal protein bS21 family
LDCKNKGH_00788 4.6e-71 yqeY S YqeY-like protein
LDCKNKGH_00789 2.5e-178 phoH T phosphate starvation-inducible protein PhoH
LDCKNKGH_00790 1.5e-80 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LDCKNKGH_00791 1e-66 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
LDCKNKGH_00792 8.7e-170 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LDCKNKGH_00793 3.8e-156 recO L Involved in DNA repair and RecF pathway recombination
LDCKNKGH_00794 4.9e-187 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
LDCKNKGH_00795 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
LDCKNKGH_00796 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
LDCKNKGH_00797 3.2e-206 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
LDCKNKGH_00798 2.2e-86
LDCKNKGH_00799 3.1e-21 S Small integral membrane protein (DUF2273)
LDCKNKGH_00800 1e-69 S Asp23 family, cell envelope-related function
LDCKNKGH_00801 6e-12 S Transglycosylase associated protein
LDCKNKGH_00802 3.8e-16
LDCKNKGH_00803 1.1e-247 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
LDCKNKGH_00804 1.1e-169 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
LDCKNKGH_00805 1.1e-178 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
LDCKNKGH_00806 6.5e-262 lysC 2.7.2.4 E Belongs to the aspartokinase family
LDCKNKGH_00807 2.4e-253 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
LDCKNKGH_00808 2.9e-72 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
LDCKNKGH_00809 3.1e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
LDCKNKGH_00810 5.1e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LDCKNKGH_00811 2.8e-140 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
LDCKNKGH_00812 1.7e-218 patA 2.6.1.1 E Aminotransferase
LDCKNKGH_00813 1.5e-197 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LDCKNKGH_00814 3e-227 ktrB P Potassium uptake protein
LDCKNKGH_00815 7.5e-118 ktrA P domain protein
LDCKNKGH_00816 9.5e-124 trmK 2.1.1.217 S SAM-dependent methyltransferase
LDCKNKGH_00817 4.9e-156 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LDCKNKGH_00818 5.6e-236 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
LDCKNKGH_00820 0.0 dnaE 2.7.7.7 L DNA polymerase
LDCKNKGH_00821 8.3e-268 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
LDCKNKGH_00822 1.6e-168 cvfB S S1 domain
LDCKNKGH_00823 6e-160 xerD D recombinase XerD
LDCKNKGH_00824 7.6e-67 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LDCKNKGH_00825 1.3e-142 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
LDCKNKGH_00826 5e-102 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LDCKNKGH_00827 1.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
LDCKNKGH_00828 3.7e-81 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
LDCKNKGH_00829 2.3e-198 ypbB 5.1.3.1 S Helix-turn-helix domain
LDCKNKGH_00830 3.1e-278 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
LDCKNKGH_00831 9.7e-31 M Lysin motif
LDCKNKGH_00832 5.8e-118 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
LDCKNKGH_00833 5.8e-209 rpsA 1.17.7.4 J Ribosomal protein S1
LDCKNKGH_00834 1.7e-246 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
LDCKNKGH_00835 4.4e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
LDCKNKGH_00836 1.8e-234 S Tetratricopeptide repeat protein
LDCKNKGH_00837 4.7e-165 xerD L Phage integrase, N-terminal SAM-like domain
LDCKNKGH_00838 2.4e-223 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
LDCKNKGH_00839 0.0 yfmR S ABC transporter, ATP-binding protein
LDCKNKGH_00840 2.1e-190 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LDCKNKGH_00841 1.9e-94 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LDCKNKGH_00842 1.2e-109 hlyIII S protein, hemolysin III
LDCKNKGH_00843 2.4e-153 DegV S EDD domain protein, DegV family
LDCKNKGH_00844 2.9e-218 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase
LDCKNKGH_00845 3.2e-107 cat S Bacterial transferase hexapeptide (six repeats)
LDCKNKGH_00846 1.1e-167 ypmR E lipolytic protein G-D-S-L family
LDCKNKGH_00847 7.1e-104 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
LDCKNKGH_00848 3.1e-36 yozE S Belongs to the UPF0346 family
LDCKNKGH_00849 5.4e-161 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LDCKNKGH_00850 2e-138 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LDCKNKGH_00851 1.4e-164 dprA LU DNA protecting protein DprA
LDCKNKGH_00852 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LDCKNKGH_00853 2.8e-154 D DNA integration
LDCKNKGH_00854 4e-172 lacX 5.1.3.3 G Aldose 1-epimerase
LDCKNKGH_00855 2.8e-103 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
LDCKNKGH_00856 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LDCKNKGH_00857 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LDCKNKGH_00858 5.2e-95 S Protein of unknown function (DUF1440)
LDCKNKGH_00859 7.3e-172 ppaC 3.6.1.1 C inorganic pyrophosphatase
LDCKNKGH_00860 2.3e-71 yqkB S Belongs to the HesB IscA family
LDCKNKGH_00861 3.4e-76 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
LDCKNKGH_00862 5.7e-94 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
LDCKNKGH_00863 2.2e-81 yebR 1.8.4.14 T GAF domain-containing protein
LDCKNKGH_00864 4.7e-244 U Belongs to the purine-cytosine permease (2.A.39) family
LDCKNKGH_00865 4e-242 codA 3.5.4.1 F cytosine deaminase
LDCKNKGH_00866 0.0 oppD EP Psort location Cytoplasmic, score
LDCKNKGH_00868 9e-256 rarA L recombination factor protein RarA
LDCKNKGH_00869 1.5e-118 S Protein of unknown function (DUF554)
LDCKNKGH_00870 2.3e-243 yhjX P Major Facilitator Superfamily
LDCKNKGH_00872 6.5e-18 lmrB EGP Major facilitator Superfamily
LDCKNKGH_00873 4e-21 clcA P chloride
LDCKNKGH_00874 5.5e-11 clcA P chloride
LDCKNKGH_00875 4e-116 5.1.1.13 M racemase activity, acting on amino acids and derivatives
LDCKNKGH_00876 4.5e-199 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
LDCKNKGH_00877 7.3e-54 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
LDCKNKGH_00878 6.4e-74 yncA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
LDCKNKGH_00879 2.2e-93 S Fic/DOC family
LDCKNKGH_00880 4.6e-97 apt 2.4.2.22, 2.4.2.7 F Phosphoribosyl transferase domain
LDCKNKGH_00881 5.9e-247 EGP Sugar (and other) transporter
LDCKNKGH_00882 5e-185 1.4.1.1, 4.3.1.12 E Ornithine cyclodeaminase/mu-crystallin family
LDCKNKGH_00883 1.7e-215 2.6.1.1 E Aminotransferase
LDCKNKGH_00886 9.1e-127 S Phage minor capsid protein 2
LDCKNKGH_00887 1.1e-163 I alpha/beta hydrolase fold
LDCKNKGH_00888 1.4e-95 K Acetyltransferase (GNAT) domain
LDCKNKGH_00891 9.2e-159 S DUF218 domain
LDCKNKGH_00892 5.1e-167 1.1.1.346 C Aldo keto reductase
LDCKNKGH_00893 1.3e-79 hmpT S ECF-type riboflavin transporter, S component
LDCKNKGH_00894 1.7e-151 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
LDCKNKGH_00895 9.6e-236 icd 1.1.1.42 C Isocitrate/isopropylmalate dehydrogenase
LDCKNKGH_00896 3.1e-62 ywkB S Membrane transport protein
LDCKNKGH_00897 7.1e-203 xerS L Belongs to the 'phage' integrase family
LDCKNKGH_00898 3.2e-180 pva3 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
LDCKNKGH_00899 7.9e-224 4.4.1.8 E Aminotransferase, class I
LDCKNKGH_00900 6.3e-196 bdhA 1.1.1.303, 1.1.1.4 C Zinc-binding dehydrogenase
LDCKNKGH_00901 1.4e-181 C Zinc-binding dehydrogenase
LDCKNKGH_00902 3.1e-102 proW P ABC transporter, permease protein
LDCKNKGH_00903 3.6e-140 proV E ABC transporter, ATP-binding protein
LDCKNKGH_00904 1.8e-108 proWZ P ABC transporter permease
LDCKNKGH_00905 1.7e-162 proX M ABC transporter, substrate-binding protein, QAT family
LDCKNKGH_00906 4.6e-70 K Transcriptional regulator
LDCKNKGH_00907 4.2e-74 O OsmC-like protein
LDCKNKGH_00908 2e-73 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
LDCKNKGH_00909 5.3e-158 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
LDCKNKGH_00910 1.3e-276 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
LDCKNKGH_00911 1.7e-218 G Transporter, major facilitator family protein
LDCKNKGH_00912 4.7e-207 adh 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
LDCKNKGH_00913 1.5e-211 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
LDCKNKGH_00914 1.3e-168 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
LDCKNKGH_00915 2.5e-40 gcvR T Belongs to the UPF0237 family
LDCKNKGH_00916 6e-244 XK27_08635 S UPF0210 protein
LDCKNKGH_00917 2.8e-179 yobV1 K WYL domain
LDCKNKGH_00918 4.1e-68 S pyridoxamine 5-phosphate
LDCKNKGH_00919 1.1e-29
LDCKNKGH_00922 4.7e-20 tra L Transposase and inactivated derivatives, IS30 family
LDCKNKGH_00923 7.4e-191 L Helix-turn-helix domain
LDCKNKGH_00924 3.3e-64
LDCKNKGH_00925 1.3e-112 yicL EG EamA-like transporter family
LDCKNKGH_00926 2.6e-74 S Domain of unknown function (DUF4352)
LDCKNKGH_00927 0.0 1.3.5.4 C FAD binding domain
LDCKNKGH_00928 7.5e-169 K LysR substrate binding domain
LDCKNKGH_00929 5.9e-160 rssA S Phospholipase, patatin family
LDCKNKGH_00930 8.8e-215 phbA 2.3.1.9 I Belongs to the thiolase family
LDCKNKGH_00931 5.6e-179 S AI-2E family transporter
LDCKNKGH_00932 1.7e-123 S membrane transporter protein
LDCKNKGH_00933 1.4e-89 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
LDCKNKGH_00934 2.6e-194 V Beta-lactamase
LDCKNKGH_00935 9.2e-228
LDCKNKGH_00937 6.3e-154 S Alpha/beta hydrolase of unknown function (DUF915)
LDCKNKGH_00938 0.0 I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LDCKNKGH_00939 2.2e-165 fadB4 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
LDCKNKGH_00940 1.2e-163 endA F DNA RNA non-specific endonuclease
LDCKNKGH_00941 2.7e-268 pipD E Dipeptidase
LDCKNKGH_00943 7.4e-191 L Helix-turn-helix domain
LDCKNKGH_00944 2.3e-254 yifK E Amino acid permease
LDCKNKGH_00946 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LDCKNKGH_00947 1e-237 N Uncharacterized conserved protein (DUF2075)
LDCKNKGH_00948 1.3e-13 S SNARE associated Golgi protein
LDCKNKGH_00949 5.3e-25 S SNARE associated Golgi protein
LDCKNKGH_00950 4.5e-79 ndk 2.7.4.6 F Belongs to the NDK family
LDCKNKGH_00951 8.3e-99 padR K Virulence activator alpha C-term
LDCKNKGH_00953 7.5e-216 I transferase activity, transferring acyl groups other than amino-acyl groups
LDCKNKGH_00955 6.3e-143 ET Bacterial periplasmic substrate-binding proteins
LDCKNKGH_00956 2.2e-156 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
LDCKNKGH_00957 1.5e-225 aadAT EK Aminotransferase, class I
LDCKNKGH_00958 3.5e-260 guaD 3.5.4.3 F Amidohydrolase family
LDCKNKGH_00959 4.1e-217 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
LDCKNKGH_00961 7.8e-57 arsC 1.20.4.1 T Low molecular weight phosphotyrosine protein phosphatase
LDCKNKGH_00962 9.9e-110 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
LDCKNKGH_00963 2.8e-36 yrfB C NADH:flavin oxidoreductase / NADH oxidase family
LDCKNKGH_00964 1.1e-89 rmeB K transcriptional regulator, MerR family
LDCKNKGH_00965 2.5e-133 ybbM S Uncharacterised protein family (UPF0014)
LDCKNKGH_00966 4.9e-111 ybbL S ABC transporter, ATP-binding protein
LDCKNKGH_00967 1.6e-42 tnp L MULE transposase domain
LDCKNKGH_00968 5.4e-53 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LDCKNKGH_00969 2.2e-55 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LDCKNKGH_00970 4.9e-69 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LDCKNKGH_00971 1.1e-103 wecD3 K Acetyltransferase (GNAT) family
LDCKNKGH_00972 1.6e-305 ubiB S ABC1 family
LDCKNKGH_00973 2.3e-130 1.14.12.17 C Oxidoreductase NAD-binding domain
LDCKNKGH_00974 2.6e-169 GK ROK family
LDCKNKGH_00975 3.7e-39
LDCKNKGH_00976 2.3e-78 copY K Copper transport repressor CopY TcrY
LDCKNKGH_00978 1.7e-148 L Belongs to the 'phage' integrase family
LDCKNKGH_00979 2.8e-221 L Transposase
LDCKNKGH_00980 2.5e-32 L Transposase and inactivated derivatives, IS30 family
LDCKNKGH_00981 6.7e-96 L Transposase and inactivated derivatives, IS30 family
LDCKNKGH_00982 3.8e-173 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
LDCKNKGH_00983 1.6e-76 3.6.3.6 P ATPase, P-type transporting, HAD superfamily, subfamily IC
LDCKNKGH_00984 6.2e-171 mutR K Transcriptional activator, Rgg GadR MutR family
LDCKNKGH_00985 3.2e-286 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
LDCKNKGH_00986 3.2e-229 gntT EG Gluconate
LDCKNKGH_00987 1.4e-181 K Transcriptional regulator, LacI family
LDCKNKGH_00988 9.5e-61 yneR
LDCKNKGH_00989 4.4e-222 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
LDCKNKGH_00990 2.2e-96 V VanZ like family
LDCKNKGH_00991 1.9e-291 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
LDCKNKGH_00992 5.4e-49 ywnB S NAD(P)H-binding
LDCKNKGH_00993 8.2e-32 yjcE P Sodium proton antiporter
LDCKNKGH_00994 1.3e-75
LDCKNKGH_00995 1.3e-184
LDCKNKGH_00996 1.6e-128 narI 1.7.5.1 C Nitrate reductase
LDCKNKGH_00997 3.1e-102 narJ C Nitrate reductase delta subunit
LDCKNKGH_00998 0.0 narH 1.7.5.1 C Respiratory nitrate reductase beta C-terminal
LDCKNKGH_00999 0.0 narG 1.7.5.1 C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
LDCKNKGH_01000 7e-189 moeB 2.7.7.73, 2.7.7.80 H ThiF family
LDCKNKGH_01001 1.9e-86 moaB 2.7.7.75 H May be involved in the biosynthesis of molybdopterin
LDCKNKGH_01002 1.2e-230 moeA 2.10.1.1 H MoeA N-terminal region (domain I and II)
LDCKNKGH_01003 9.3e-85 moaC 4.6.1.17 H Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
LDCKNKGH_01004 1.1e-98 mobA 2.7.7.77 H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
LDCKNKGH_01005 4.2e-40
LDCKNKGH_01006 5.4e-77 nreA T GAF domain
LDCKNKGH_01007 1e-185 comP 2.7.13.3 F Sensor histidine kinase
LDCKNKGH_01008 4e-116 nreC K PFAM regulatory protein LuxR
LDCKNKGH_01009 1.2e-39
LDCKNKGH_01010 8.8e-184
LDCKNKGH_01011 9.7e-169 hepT 2.5.1.30, 2.5.1.90 H geranyltranstransferase activity
LDCKNKGH_01013 3.3e-132 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
LDCKNKGH_01014 2.9e-162 hipB K Helix-turn-helix
LDCKNKGH_01015 1.5e-58 yitW S Iron-sulfur cluster assembly protein
LDCKNKGH_01016 8.1e-216 narK P Major Facilitator Superfamily
LDCKNKGH_01017 2.3e-195 moaA 4.1.99.22 H Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LDCKNKGH_01018 6.4e-35 moaD 2.8.1.12 H ThiS family
LDCKNKGH_01019 2.2e-72 moaE 2.8.1.12 H MoaE protein
LDCKNKGH_01020 1.3e-57 S Flavodoxin
LDCKNKGH_01021 3.9e-171 fecD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LDCKNKGH_01022 1e-142 fecE 3.6.3.34 HP AAA domain, putative AbiEii toxin, Type IV TA system
LDCKNKGH_01023 2.6e-230 ndh 1.6.99.3 C NADH dehydrogenase
LDCKNKGH_01024 8.8e-53 yitW S Iron-sulfur cluster assembly protein
LDCKNKGH_01025 4.7e-19 M1-755 S Domain of unknown function (DUF1858)
LDCKNKGH_01026 1.8e-256 XK27_04775 S PAS domain
LDCKNKGH_01027 2.4e-142 EG EamA-like transporter family
LDCKNKGH_01028 1.2e-188 L PFAM Integrase, catalytic core
LDCKNKGH_01029 6.1e-183 fecB P Periplasmic binding protein
LDCKNKGH_01030 4.2e-272 sufB O assembly protein SufB
LDCKNKGH_01031 7.1e-83 nifU C SUF system FeS assembly protein, NifU family
LDCKNKGH_01032 5.2e-234 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LDCKNKGH_01033 2.9e-243 sufD O FeS assembly protein SufD
LDCKNKGH_01034 8.5e-145 sufC O FeS assembly ATPase SufC
LDCKNKGH_01035 1.4e-33 feoA P FeoA domain
LDCKNKGH_01036 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
LDCKNKGH_01037 6.7e-23 S Virus attachment protein p12 family
LDCKNKGH_01038 2.4e-156 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
LDCKNKGH_01039 2.5e-178 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
LDCKNKGH_01040 2.5e-183 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LDCKNKGH_01041 3.5e-216 aspB E DegT/DnrJ/EryC1/StrS aminotransferase family
LDCKNKGH_01042 8.7e-90 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LDCKNKGH_01043 4.5e-197 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
LDCKNKGH_01044 1.7e-235 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
LDCKNKGH_01045 3.2e-103
LDCKNKGH_01046 2.5e-214 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
LDCKNKGH_01047 7.6e-13 pheA 1.3.1.12, 2.3.1.79, 4.2.1.51, 5.4.99.5 E Chorismate mutase type II
LDCKNKGH_01048 6.4e-213 ydiN G Major Facilitator Superfamily
LDCKNKGH_01050 1.1e-243 dtpT U amino acid peptide transporter
LDCKNKGH_01053 2.5e-152 S Sucrose-6F-phosphate phosphohydrolase
LDCKNKGH_01054 2.1e-157 1.6.5.2 GM NAD(P)H-binding
LDCKNKGH_01055 5.5e-158 S Alpha beta hydrolase
LDCKNKGH_01056 2.7e-237 lmrB EGP Major facilitator Superfamily
LDCKNKGH_01058 0.0 S Bacterial membrane protein YfhO
LDCKNKGH_01059 6.6e-12
LDCKNKGH_01060 5.4e-50
LDCKNKGH_01061 0.0 kup P Transport of potassium into the cell
LDCKNKGH_01063 1.1e-283 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LDCKNKGH_01064 5.4e-26 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
LDCKNKGH_01065 0.0 yjbQ P TrkA C-terminal domain protein
LDCKNKGH_01066 1.1e-275 pipD E Dipeptidase
LDCKNKGH_01067 3.4e-158 S Alpha/beta hydrolase of unknown function (DUF915)
LDCKNKGH_01068 8.8e-240 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LDCKNKGH_01069 5.4e-43 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LDCKNKGH_01070 1.6e-168 T Calcineurin-like phosphoesterase superfamily domain
LDCKNKGH_01071 9.6e-121 EGP Major facilitator Superfamily
LDCKNKGH_01072 7.1e-22 EGP Major facilitator Superfamily
LDCKNKGH_01073 3.4e-201 mdtG EGP Major facilitator Superfamily
LDCKNKGH_01074 1.3e-249 yhdP S Transporter associated domain
LDCKNKGH_01075 1.7e-213 naiP EGP Major facilitator Superfamily
LDCKNKGH_01076 1.7e-15 K LysR substrate binding domain protein
LDCKNKGH_01077 5.6e-57 K Transcriptional regulator
LDCKNKGH_01078 2.6e-216 E GDSL-like Lipase/Acylhydrolase family
LDCKNKGH_01079 1.5e-194 lplA 6.3.1.20 H Lipoate-protein ligase
LDCKNKGH_01080 6.9e-259 lpdA 1.8.1.4 C Dehydrogenase
LDCKNKGH_01081 4.5e-204 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
LDCKNKGH_01082 8.4e-179 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
LDCKNKGH_01083 1.4e-182 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
LDCKNKGH_01084 1.1e-09 yphJ 4.1.1.44 S decarboxylase
LDCKNKGH_01085 1.6e-31 yphJ 4.1.1.44 S decarboxylase
LDCKNKGH_01086 2.8e-54 azlD E Branched-chain amino acid transport
LDCKNKGH_01087 9.8e-121 azlC E azaleucine resistance protein AzlC
LDCKNKGH_01088 3.2e-286 thrC 4.2.3.1 E Threonine synthase
LDCKNKGH_01089 3.5e-233 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
LDCKNKGH_01090 8e-157 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
LDCKNKGH_01091 3.5e-99 K Acetyltransferase (GNAT) domain
LDCKNKGH_01092 2.6e-112 ylbE GM NAD(P)H-binding
LDCKNKGH_01093 7.3e-118 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
LDCKNKGH_01094 1.2e-132 S Belongs to the UPF0246 family
LDCKNKGH_01095 4.6e-98
LDCKNKGH_01096 1.6e-160 degV S EDD domain protein, DegV family
LDCKNKGH_01097 1.6e-103 tnp L MULE transposase domain
LDCKNKGH_01098 3.4e-146 tra L Transposase and inactivated derivatives, IS30 family
LDCKNKGH_01099 4.4e-120 cah 4.2.1.1 P Eukaryotic-type carbonic anhydrase
LDCKNKGH_01100 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
LDCKNKGH_01101 1.4e-206 carA 6.3.5.5 F Belongs to the CarA family
LDCKNKGH_01102 3.4e-174 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LDCKNKGH_01103 5.1e-75 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LDCKNKGH_01104 1.7e-70 esbA S Family of unknown function (DUF5322)
LDCKNKGH_01105 2.2e-69 rnhA 3.1.26.4 L Ribonuclease HI
LDCKNKGH_01106 6.9e-107 XK27_02070 S Nitroreductase family
LDCKNKGH_01107 1.2e-118 yecS E ABC transporter permease
LDCKNKGH_01108 8.4e-22 M Glycosyltransferase like family 2
LDCKNKGH_01109 1.9e-46 L Transposase
LDCKNKGH_01110 5.1e-170 tnp L MULE transposase domain
LDCKNKGH_01111 2.4e-118 L Integrase core domain
LDCKNKGH_01113 4.4e-53 L Helix-turn-helix domain
LDCKNKGH_01114 2.7e-157 L hmm pf00665
LDCKNKGH_01115 1.2e-272 nylA 3.5.1.4 J Belongs to the amidase family
LDCKNKGH_01116 5.6e-128 arcD S C4-dicarboxylate anaerobic carrier
LDCKNKGH_01117 1.9e-214 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
LDCKNKGH_01118 8.9e-83 F Hydrolase, NUDIX family
LDCKNKGH_01119 1.4e-212 S Type IV secretion-system coupling protein DNA-binding domain
LDCKNKGH_01120 0.0 tetP J elongation factor G
LDCKNKGH_01121 4.6e-58 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
LDCKNKGH_01122 3.9e-110 ypsA S Belongs to the UPF0398 family
LDCKNKGH_01123 1e-116 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
LDCKNKGH_01124 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
LDCKNKGH_01125 3.7e-160 EG EamA-like transporter family
LDCKNKGH_01126 1.8e-192 C Aldo keto reductase family protein
LDCKNKGH_01127 1.3e-121 ypuA S Protein of unknown function (DUF1002)
LDCKNKGH_01128 4.7e-134 dnaD L DnaD domain protein
LDCKNKGH_01129 2.1e-257 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
LDCKNKGH_01130 1.6e-88 ypmB S Protein conserved in bacteria
LDCKNKGH_01131 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
LDCKNKGH_01132 2.2e-168 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
LDCKNKGH_01133 8.2e-182 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
LDCKNKGH_01134 1.5e-211 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
LDCKNKGH_01135 4.5e-205 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
LDCKNKGH_01136 1.8e-87 pstB 3.6.3.27 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
LDCKNKGH_01137 1.2e-224 L Transposase
LDCKNKGH_01138 3.5e-271 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
LDCKNKGH_01139 2.6e-166 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
LDCKNKGH_01140 1.7e-159 carB 6.3.5.5 F Carbamoyl-phosphate synthase
LDCKNKGH_01141 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
LDCKNKGH_01142 2.5e-208 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
LDCKNKGH_01143 8.9e-245 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
LDCKNKGH_01144 1.4e-181 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
LDCKNKGH_01145 9.5e-46 L Transposase
LDCKNKGH_01146 4.2e-169 L Integrase core domain
LDCKNKGH_01147 1.6e-48 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LDCKNKGH_01148 1.2e-194 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LDCKNKGH_01149 5.2e-124 cas4 3.1.12.1 L Domain of unknown function DUF83
LDCKNKGH_01150 2.5e-158 csd2 L CRISPR-associated protein Cas7
LDCKNKGH_01151 1.2e-263 csd1 3.5.1.28 M CRISPR-associated protein (Cas_Csd1)
LDCKNKGH_01152 1.8e-141 cas5d S CRISPR-associated protein (Cas_Cas5)
LDCKNKGH_01153 8.5e-229 tnp L MULE transposase domain
LDCKNKGH_01154 5.8e-117 L Integrase core domain
LDCKNKGH_01155 1.9e-46 L Transposase
LDCKNKGH_01156 5.5e-56 L Helix-turn-helix domain
LDCKNKGH_01157 2.1e-58 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
LDCKNKGH_01158 7.5e-261 yfnA E Amino Acid
LDCKNKGH_01159 2.9e-142 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
LDCKNKGH_01160 2.1e-88 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LDCKNKGH_01161 5.4e-40 ylqC S Belongs to the UPF0109 family
LDCKNKGH_01162 2.9e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
LDCKNKGH_01163 1.1e-122 phoU P Plays a role in the regulation of phosphate uptake
LDCKNKGH_01164 6.8e-136 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LDCKNKGH_01165 9.4e-153 pstA P Phosphate transport system permease protein PstA
LDCKNKGH_01166 3.3e-153 pstC P probably responsible for the translocation of the substrate across the membrane
LDCKNKGH_01167 5.1e-159 pstS P Phosphate
LDCKNKGH_01168 8.6e-125 K Transcriptional regulatory protein, C-terminal domain protein
LDCKNKGH_01169 7.6e-245 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LDCKNKGH_01170 3.7e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
LDCKNKGH_01171 2e-195 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
LDCKNKGH_01172 0.0 smc D Required for chromosome condensation and partitioning
LDCKNKGH_01173 5.2e-130 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
LDCKNKGH_01174 4.5e-36 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
LDCKNKGH_01175 2.8e-164 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
LDCKNKGH_01176 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LDCKNKGH_01177 4.4e-297 yloV S DAK2 domain fusion protein YloV
LDCKNKGH_01178 3.6e-58 asp S Asp23 family, cell envelope-related function
LDCKNKGH_01179 7.2e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
LDCKNKGH_01180 1.2e-123 thiN 2.7.6.2 H thiamine pyrophosphokinase
LDCKNKGH_01181 1.1e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
LDCKNKGH_01182 2.4e-164 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
LDCKNKGH_01183 0.0 KLT serine threonine protein kinase
LDCKNKGH_01184 2.2e-131 stp 3.1.3.16 T phosphatase
LDCKNKGH_01185 2e-247 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LDCKNKGH_01186 2.7e-174 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LDCKNKGH_01187 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LDCKNKGH_01188 1.1e-220 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LDCKNKGH_01189 3.2e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
LDCKNKGH_01190 3.9e-113 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
LDCKNKGH_01191 2.5e-15
LDCKNKGH_01192 1.3e-307 recN L May be involved in recombinational repair of damaged DNA
LDCKNKGH_01193 6.2e-76 argR K Regulates arginine biosynthesis genes
LDCKNKGH_01194 6.4e-148 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
LDCKNKGH_01195 6.2e-157 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
LDCKNKGH_01196 1e-18 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LDCKNKGH_01197 3e-257 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LDCKNKGH_01198 2.6e-160 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LDCKNKGH_01199 1.4e-69 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LDCKNKGH_01200 4.1e-72 yqhY S Asp23 family, cell envelope-related function
LDCKNKGH_01201 8.1e-207 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
LDCKNKGH_01202 7.1e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
LDCKNKGH_01203 9e-53 ysxB J Cysteine protease Prp
LDCKNKGH_01204 1.8e-50 rplU J This protein binds to 23S rRNA in the presence of protein L20
LDCKNKGH_01205 2.8e-114 K Transcriptional regulator
LDCKNKGH_01207 1.5e-92 dut S Protein conserved in bacteria
LDCKNKGH_01208 1.6e-177
LDCKNKGH_01209 7e-148
LDCKNKGH_01210 4.7e-13
LDCKNKGH_01211 2.6e-263 glnA 6.3.1.2 E glutamine synthetase
LDCKNKGH_01212 8.5e-173 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LDCKNKGH_01213 4.8e-24 WQ51_02665 S Protein of unknown function (DUF3042)
LDCKNKGH_01214 1.5e-71 yqhL P Rhodanese-like protein
LDCKNKGH_01215 1.2e-180 glk 2.7.1.2 G Glucokinase
LDCKNKGH_01216 9.6e-36 yqgQ S Bacterial protein of unknown function (DUF910)
LDCKNKGH_01217 2e-115 gluP 3.4.21.105 S Peptidase, S54 family
LDCKNKGH_01218 9.2e-98 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LDCKNKGH_01219 3.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
LDCKNKGH_01220 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
LDCKNKGH_01221 0.0 S membrane
LDCKNKGH_01222 2.2e-79 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LDCKNKGH_01223 1.4e-116 udk 2.7.1.48 F Cytidine monophosphokinase
LDCKNKGH_01224 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LDCKNKGH_01225 5.6e-197 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LDCKNKGH_01226 7.8e-60 yodB K Transcriptional regulator, HxlR family
LDCKNKGH_01227 7.8e-91 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
LDCKNKGH_01228 5.8e-141 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LDCKNKGH_01229 4.1e-46 acyP 3.6.1.7 C Belongs to the acylphosphatase family
LDCKNKGH_01230 3.3e-134 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LDCKNKGH_01231 3e-69 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
LDCKNKGH_01232 1.6e-233 V MatE
LDCKNKGH_01233 9e-281 arlS 2.7.13.3 T Histidine kinase
LDCKNKGH_01234 5.6e-121 K response regulator
LDCKNKGH_01235 7.2e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
LDCKNKGH_01236 2.3e-96 yceD S Uncharacterized ACR, COG1399
LDCKNKGH_01237 1.7e-215 ylbM S Belongs to the UPF0348 family
LDCKNKGH_01238 8.3e-142 yqeM Q Methyltransferase
LDCKNKGH_01239 6.1e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
LDCKNKGH_01240 7.3e-112 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
LDCKNKGH_01241 4.1e-94 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LDCKNKGH_01242 2.6e-49 yhbY J RNA-binding protein
LDCKNKGH_01243 7.6e-216 yqeH S Ribosome biogenesis GTPase YqeH
LDCKNKGH_01244 2.2e-96 yqeG S HAD phosphatase, family IIIA
LDCKNKGH_01245 2.7e-25 yoaK S Protein of unknown function (DUF1275)
LDCKNKGH_01246 5.5e-19 yoaK S Protein of unknown function (DUF1275)
LDCKNKGH_01247 6.6e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LDCKNKGH_01248 1.5e-26 rpmI J Belongs to the bacterial ribosomal protein bL35 family
LDCKNKGH_01249 1.7e-85 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LDCKNKGH_01250 2.5e-172 dnaI L Primosomal protein DnaI
LDCKNKGH_01251 3.6e-252 dnaB L replication initiation and membrane attachment
LDCKNKGH_01252 8.5e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LDCKNKGH_01253 1e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LDCKNKGH_01254 2.1e-162 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
LDCKNKGH_01255 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LDCKNKGH_01256 2.9e-139 aroD S Serine hydrolase (FSH1)
LDCKNKGH_01257 5.3e-114 ybhL S Belongs to the BI1 family
LDCKNKGH_01258 1.4e-250 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
LDCKNKGH_01259 2e-117 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LDCKNKGH_01260 6.5e-56 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
LDCKNKGH_01261 3.3e-58 ytzB S Small secreted protein
LDCKNKGH_01262 1.8e-124 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
LDCKNKGH_01263 2.9e-210 ecsB U ABC transporter
LDCKNKGH_01264 2.3e-133 ecsA V ABC transporter, ATP-binding protein
LDCKNKGH_01265 1.4e-77 hit FG histidine triad
LDCKNKGH_01267 3.1e-149 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
LDCKNKGH_01268 2.8e-179 yhaM S Metal dependent phosphohydrolases with conserved 'HD' motif.
LDCKNKGH_01269 9.8e-56 yheA S Belongs to the UPF0342 family
LDCKNKGH_01270 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
LDCKNKGH_01271 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
LDCKNKGH_01273 1.7e-36
LDCKNKGH_01275 2.4e-201 folP 2.5.1.15 H dihydropteroate synthase
LDCKNKGH_01276 2e-106 xtp 2.5.1.15, 3.6.1.66 F Ham1 family
LDCKNKGH_01277 3.7e-243 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
LDCKNKGH_01278 3.1e-104 folE 2.7.6.3, 3.5.4.16 F GTP cyclohydrolase 1
LDCKNKGH_01279 1.5e-94 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
LDCKNKGH_01280 2.5e-62 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LDCKNKGH_01281 1.1e-119 S CAAX protease self-immunity
LDCKNKGH_01282 9.9e-183 rbsR K Periplasmic binding proteins and sugar binding domain of LacI family
LDCKNKGH_01283 2.3e-110
LDCKNKGH_01284 8.6e-116 dck 2.7.1.74 F deoxynucleoside kinase
LDCKNKGH_01285 3.2e-166 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
LDCKNKGH_01286 5.4e-256 S Putative peptidoglycan binding domain
LDCKNKGH_01287 3.3e-86 uspA T Belongs to the universal stress protein A family
LDCKNKGH_01288 1.2e-274 pepV 3.5.1.18 E dipeptidase PepV
LDCKNKGH_01289 1.3e-154 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LDCKNKGH_01290 3.6e-61 3.2.1.23 S Domain of unknown function DUF302
LDCKNKGH_01291 3.6e-299 ytgP S Polysaccharide biosynthesis protein
LDCKNKGH_01292 2.6e-42
LDCKNKGH_01293 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
LDCKNKGH_01294 7.6e-121 3.1.3.2, 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I Acid phosphatase homologues
LDCKNKGH_01295 4.9e-224 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LDCKNKGH_01296 3.7e-140 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LDCKNKGH_01297 3e-210 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LDCKNKGH_01298 1.3e-51
LDCKNKGH_01299 3.4e-97 tag 3.2.2.20 L glycosylase
LDCKNKGH_01300 2e-253 EGP Major facilitator Superfamily
LDCKNKGH_01301 7.4e-85 perR P Belongs to the Fur family
LDCKNKGH_01302 1.8e-248 cycA E Amino acid permease
LDCKNKGH_01303 4e-22
LDCKNKGH_01306 2.7e-91 K Transcriptional regulator, TetR family
LDCKNKGH_01307 1.1e-77 hsp O Belongs to the small heat shock protein (HSP20) family
LDCKNKGH_01308 6.2e-85 ykhA 3.1.2.20 I Thioesterase superfamily
LDCKNKGH_01309 4.7e-66 lytE M LysM domain protein
LDCKNKGH_01310 8.2e-196 adh 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
LDCKNKGH_01311 1e-235 F Permease
LDCKNKGH_01312 5.4e-161 sufD O Uncharacterized protein family (UPF0051)
LDCKNKGH_01313 3.4e-111 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LDCKNKGH_01314 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
LDCKNKGH_01315 2e-110 XK27_05795 P ABC transporter permease
LDCKNKGH_01316 6.9e-142 ET Bacterial periplasmic substrate-binding proteins
LDCKNKGH_01317 6.5e-11 emrE P Membrane transporters of cations and cationic drugs
LDCKNKGH_01329 9.8e-77
LDCKNKGH_01332 9.7e-39 ykuJ S Protein of unknown function (DUF1797)
LDCKNKGH_01333 6.5e-182 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
LDCKNKGH_01334 1e-198 cpoA GT4 M Glycosyltransferase, group 1 family protein
LDCKNKGH_01335 5e-229 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
LDCKNKGH_01336 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LDCKNKGH_01337 4.7e-39 ptsH G phosphocarrier protein HPR
LDCKNKGH_01339 0.0 clpE O Belongs to the ClpA ClpB family
LDCKNKGH_01340 6.4e-128 3.6.1.13, 3.6.1.55 F NUDIX domain
LDCKNKGH_01341 3.7e-110 pncA Q Isochorismatase family
LDCKNKGH_01342 1.7e-265 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LDCKNKGH_01343 1.7e-97 S Pfam:DUF3816
LDCKNKGH_01344 1e-141 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G MucBP domain
LDCKNKGH_01345 1.3e-134 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LDCKNKGH_01346 6.5e-162 EG EamA-like transporter family
LDCKNKGH_01347 1.2e-246 yxbA 6.3.1.12 S ATP-grasp enzyme
LDCKNKGH_01349 1.2e-14
LDCKNKGH_01350 4.7e-157 V ABC transporter, ATP-binding protein
LDCKNKGH_01351 2.3e-63 gntR1 K Transcriptional regulator, GntR family
LDCKNKGH_01352 5e-173 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
LDCKNKGH_01353 7.9e-61 M repeat protein
LDCKNKGH_01354 8.9e-57 acmD 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
LDCKNKGH_01355 4.3e-46 L Transposase
LDCKNKGH_01356 6.8e-203 glf 5.4.99.9 M UDP-galactopyranose mutase
LDCKNKGH_01357 1.3e-28 L Transposase
LDCKNKGH_01358 3.6e-114 L PFAM Integrase catalytic region
LDCKNKGH_01359 1.1e-23 L Helix-turn-helix domain
LDCKNKGH_01360 4.4e-49 tnp L MULE transposase domain
LDCKNKGH_01361 1.9e-46 L Transposase
LDCKNKGH_01362 5e-119 rfbP M Bacterial sugar transferase
LDCKNKGH_01363 4.2e-147 recX 2.4.1.337 GT4 S Regulatory protein RecX
LDCKNKGH_01364 1.3e-07
LDCKNKGH_01365 3.8e-31 S Protein of unknown function (DUF2922)
LDCKNKGH_01366 2.7e-139 yihY S Belongs to the UPF0761 family
LDCKNKGH_01367 0.0 XK27_08315 M Sulfatase
LDCKNKGH_01368 1.7e-167 map 3.4.11.18 E Methionine Aminopeptidase
LDCKNKGH_01369 4.7e-76 fld C Flavodoxin
LDCKNKGH_01370 8.6e-75 gtcA S Teichoic acid glycosylation protein
LDCKNKGH_01372 8.9e-232 yfmL 3.6.4.13 L DEAD DEAH box helicase
LDCKNKGH_01373 6.4e-190 mocA S Oxidoreductase
LDCKNKGH_01374 4.9e-63 S Domain of unknown function (DUF4828)
LDCKNKGH_01375 1.4e-104 yvdD 3.2.2.10 S Belongs to the LOG family
LDCKNKGH_01376 4.3e-161 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
LDCKNKGH_01377 1.8e-289 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
LDCKNKGH_01378 1.4e-139 S NADPH-dependent FMN reductase
LDCKNKGH_01379 2.3e-33 yneR S Belongs to the HesB IscA family
LDCKNKGH_01380 1.3e-304 ybiT S ABC transporter, ATP-binding protein
LDCKNKGH_01381 2e-85 dps P Belongs to the Dps family
LDCKNKGH_01382 1.6e-105
LDCKNKGH_01383 3e-184 brpA K Cell envelope-like function transcriptional attenuator common domain protein
LDCKNKGH_01384 1.4e-101 K helix_turn_helix multiple antibiotic resistance protein
LDCKNKGH_01385 3.4e-49 fsr EGP Major Facilitator Superfamily
LDCKNKGH_01386 6.6e-81 fsr EGP Major Facilitator Superfamily
LDCKNKGH_01387 5.4e-100 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LDCKNKGH_01388 1.2e-103 S CAAX protease self-immunity
LDCKNKGH_01390 2.8e-120 Q Methyltransferase domain
LDCKNKGH_01391 8.6e-91 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
LDCKNKGH_01392 2.8e-51 K 2 iron, 2 sulfur cluster binding
LDCKNKGH_01393 0.0 mco Q Multicopper oxidase
LDCKNKGH_01394 1.4e-89 S Aminoacyl-tRNA editing domain
LDCKNKGH_01395 1.7e-47 ddaH 3.5.3.18 E dimethylargininase activity
LDCKNKGH_01396 4.1e-74 ddaH 3.5.3.18 E Amidinotransferase
LDCKNKGH_01398 1.4e-190 nhaC C Na H antiporter NhaC
LDCKNKGH_01399 3.9e-180 S Phosphotransferase system, EIIC
LDCKNKGH_01400 8.5e-229 tnp L MULE transposase domain
LDCKNKGH_01401 1.2e-263 npr 1.11.1.1 C NADH oxidase
LDCKNKGH_01402 4.7e-227 tnp L MULE transposase domain
LDCKNKGH_01403 2.9e-19 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
LDCKNKGH_01404 1.9e-46 L Transposase
LDCKNKGH_01405 9.9e-171 L Integrase core domain
LDCKNKGH_01406 1.6e-38 L Transposase
LDCKNKGH_01407 4.1e-113 flp 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
LDCKNKGH_01408 5.4e-46 D Di-iron-containing protein involved in the repair of iron-sulfur clusters
LDCKNKGH_01409 5.6e-33 copZ P Heavy-metal-associated domain
LDCKNKGH_01410 2.6e-41 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
LDCKNKGH_01411 8.9e-290 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
LDCKNKGH_01412 9.8e-82
LDCKNKGH_01413 8.5e-215 tra L Transposase and inactivated derivatives, IS30 family
LDCKNKGH_01414 1.3e-98 L Transposase
LDCKNKGH_01415 1.5e-39 L Transposase
LDCKNKGH_01416 7.4e-186 yegS 2.7.1.107 G Lipid kinase
LDCKNKGH_01417 5e-273 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LDCKNKGH_01418 6.7e-273 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
LDCKNKGH_01419 1e-48 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LDCKNKGH_01420 3.2e-166 camS S sex pheromone
LDCKNKGH_01421 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LDCKNKGH_01422 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
LDCKNKGH_01423 1.4e-220 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
LDCKNKGH_01424 3.2e-101 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
LDCKNKGH_01425 5.8e-109 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
LDCKNKGH_01426 1.2e-138 IQ reductase
LDCKNKGH_01427 4.1e-190 S interspecies interaction between organisms
LDCKNKGH_01428 1.5e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
LDCKNKGH_01429 2.6e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LDCKNKGH_01430 2.2e-145 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
LDCKNKGH_01431 1.1e-139 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LDCKNKGH_01432 2e-155 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LDCKNKGH_01433 1e-148 cbiO P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LDCKNKGH_01434 2.8e-61 rplQ J Ribosomal protein L17
LDCKNKGH_01435 2e-169 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LDCKNKGH_01436 1e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LDCKNKGH_01437 9.5e-59 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LDCKNKGH_01438 1.1e-13 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
LDCKNKGH_01439 1e-31 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LDCKNKGH_01440 6.4e-122 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
LDCKNKGH_01441 1.3e-235 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
LDCKNKGH_01442 2.1e-65 rplO J Binds to the 23S rRNA
LDCKNKGH_01443 2.5e-23 rpmD J Ribosomal protein L30
LDCKNKGH_01444 2.6e-86 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LDCKNKGH_01445 3.9e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LDCKNKGH_01446 5.1e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LDCKNKGH_01447 1e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LDCKNKGH_01448 5.2e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LDCKNKGH_01449 4.2e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LDCKNKGH_01450 5.2e-50 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LDCKNKGH_01451 6.6e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LDCKNKGH_01452 2.5e-40 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LDCKNKGH_01453 1.1e-27 rpmC J Belongs to the universal ribosomal protein uL29 family
LDCKNKGH_01454 6e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LDCKNKGH_01455 6.2e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LDCKNKGH_01456 2.2e-52 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LDCKNKGH_01457 8.4e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LDCKNKGH_01458 3.2e-150 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LDCKNKGH_01459 4.8e-45 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
LDCKNKGH_01460 2.7e-106 rplD J Forms part of the polypeptide exit tunnel
LDCKNKGH_01461 8.7e-119 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LDCKNKGH_01462 2.6e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
LDCKNKGH_01463 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LDCKNKGH_01464 7.1e-83 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
LDCKNKGH_01465 3.2e-71 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LDCKNKGH_01466 1.6e-32 pilD 3.4.23.43 NOU aspartic-type endopeptidase activity
LDCKNKGH_01467 7.4e-214 ykiI
LDCKNKGH_01468 5.6e-135 puuD S peptidase C26
LDCKNKGH_01469 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LDCKNKGH_01470 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LDCKNKGH_01471 5.8e-106 K Bacterial regulatory proteins, tetR family
LDCKNKGH_01472 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
LDCKNKGH_01473 4.8e-79 ctsR K Belongs to the CtsR family
LDCKNKGH_01474 2.8e-193 adhP 1.1.1.1 C alcohol dehydrogenase
LDCKNKGH_01475 1.3e-131 XK27_07210 6.1.1.6 S B3 4 domain
LDCKNKGH_01476 7.9e-120 J 2'-5' RNA ligase superfamily
LDCKNKGH_01477 2.8e-38 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
LDCKNKGH_01478 9.7e-40 rmeB K transcriptional regulator, MerR family
LDCKNKGH_01479 1.4e-75 thiW S Thiamine-precursor transporter protein (ThiW)
LDCKNKGH_01480 9.1e-40 S ABC-type cobalt transport system, permease component
LDCKNKGH_01481 1.2e-16 S ABC-type cobalt transport system, permease component
LDCKNKGH_01482 9.4e-147 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
LDCKNKGH_01483 2.7e-17 IQ reductase
LDCKNKGH_01484 2e-11 IQ Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LDCKNKGH_01490 7.9e-117 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
LDCKNKGH_01491 3.9e-268 lysP E amino acid
LDCKNKGH_01493 1.8e-155 I alpha/beta hydrolase fold
LDCKNKGH_01494 9.1e-116 lssY 3.6.1.27 I phosphatase
LDCKNKGH_01495 2.8e-82 S Threonine/Serine exporter, ThrE
LDCKNKGH_01496 3.2e-125 thrE S Putative threonine/serine exporter
LDCKNKGH_01497 1.3e-30 cspA K Cold shock protein
LDCKNKGH_01498 1.2e-123 sirR K iron dependent repressor
LDCKNKGH_01499 1.6e-163 czcD P cation diffusion facilitator family transporter
LDCKNKGH_01500 2e-113 S membrane
LDCKNKGH_01501 2.2e-109 S VIT family
LDCKNKGH_01502 4.5e-85 usp1 T Belongs to the universal stress protein A family
LDCKNKGH_01503 2.2e-14 elaA S GNAT family
LDCKNKGH_01505 8.2e-216 S CAAX protease self-immunity
LDCKNKGH_01506 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LDCKNKGH_01507 2e-58
LDCKNKGH_01508 1.9e-74 merR K MerR HTH family regulatory protein
LDCKNKGH_01509 1.4e-265 lmrB EGP Major facilitator Superfamily
LDCKNKGH_01510 2e-113 S Domain of unknown function (DUF4811)
LDCKNKGH_01511 5.5e-149 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
LDCKNKGH_01512 1.6e-154 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
LDCKNKGH_01514 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
LDCKNKGH_01515 6.1e-108 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
LDCKNKGH_01516 2.4e-189 I Alpha beta
LDCKNKGH_01517 5.5e-121 ung2 3.2.2.27 L Uracil-DNA glycosylase
LDCKNKGH_01518 4.6e-252 yjjP S Putative threonine/serine exporter
LDCKNKGH_01519 6.6e-162 mleR K LysR family transcriptional regulator
LDCKNKGH_01520 4.1e-21 L Transposase
LDCKNKGH_01521 1.6e-182 L PFAM Integrase catalytic region
LDCKNKGH_01522 1.7e-122 L hmm pf00665
LDCKNKGH_01523 3.4e-171 L Integrase core domain
LDCKNKGH_01524 1.8e-44 L Transposase
LDCKNKGH_01525 4.7e-20 tra L Transposase and inactivated derivatives, IS30 family
LDCKNKGH_01526 1.3e-48 tnp L MULE transposase domain
LDCKNKGH_01527 1.1e-121 L hmm pf00665
LDCKNKGH_01528 3.6e-108 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LDCKNKGH_01529 0.0 scrA 2.7.1.211, 5.3.1.1 G phosphotransferase system
LDCKNKGH_01530 1.8e-195 adhA 1.1.1.1 C Zinc-binding alcohol dehydrogenase family protein
LDCKNKGH_01531 4.5e-301 scrB 3.2.1.26 GH32 G invertase
LDCKNKGH_01532 1.9e-261 S Uncharacterized protein conserved in bacteria (DUF2252)
LDCKNKGH_01533 3.2e-164 K LysR substrate binding domain
LDCKNKGH_01534 2.6e-163 S Polyphosphate nucleotide phosphotransferase, PPK2 family
LDCKNKGH_01535 5.5e-112
LDCKNKGH_01537 9e-265 yjeM E Amino Acid
LDCKNKGH_01538 2e-169 ponA V Beta-lactamase enzyme family
LDCKNKGH_01539 1.7e-224 dacA 3.4.16.4 M Belongs to the peptidase S11 family
LDCKNKGH_01540 1.3e-96
LDCKNKGH_01541 3.8e-198 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
LDCKNKGH_01542 1.4e-107 lssY 3.6.1.27 I Acid phosphatase homologues
LDCKNKGH_01543 7.8e-54 S MazG-like family
LDCKNKGH_01544 0.0 L Helicase C-terminal domain protein
LDCKNKGH_01545 2.2e-72 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
LDCKNKGH_01546 8.5e-96 K transcriptional regulator
LDCKNKGH_01547 1.2e-253 lmrB EGP Major facilitator Superfamily
LDCKNKGH_01548 9.2e-16 S Domain of unknown function (DUF4811)
LDCKNKGH_01551 3.5e-38 S Cytochrome B5
LDCKNKGH_01552 3e-89 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
LDCKNKGH_01553 4.1e-214 2.1.1.14 E methionine synthase, vitamin-B12 independent
LDCKNKGH_01554 2.3e-195 asnA 6.3.1.1 F aspartate--ammonia ligase
LDCKNKGH_01555 6.4e-105 3.2.1.17 NU mannosyl-glycoprotein
LDCKNKGH_01556 1.1e-95 wecD K Acetyltransferase (GNAT) family
LDCKNKGH_01557 1e-284 dinB 2.7.7.7 L impB/mucB/samB family C-terminal domain
LDCKNKGH_01558 5.9e-82 S Psort location Cytoplasmic, score
LDCKNKGH_01559 8.7e-72 K helix_turn_helix, mercury resistance
LDCKNKGH_01560 2.7e-134 ybgJ 3.5.1.54 E Allophanate hydrolase subunit 1
LDCKNKGH_01561 1.7e-190 kipA 6.3.4.6 E Allophanate hydrolase subunit 2
LDCKNKGH_01562 1.8e-61 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
LDCKNKGH_01563 2.2e-257 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
LDCKNKGH_01564 2e-124 ycsF S LamB/YcsF family
LDCKNKGH_01565 1.1e-209 ycsG P Natural resistance-associated macrophage protein
LDCKNKGH_01566 1.6e-208 EGP Major facilitator Superfamily
LDCKNKGH_01567 1.2e-255 gor 1.8.1.7 C pyridine nucleotide-disulfide oxidoreductase
LDCKNKGH_01568 1.1e-52 trxA O Belongs to the thioredoxin family
LDCKNKGH_01569 5.3e-17 mleP3 S Membrane transport protein
LDCKNKGH_01571 2.9e-226 L transposase, IS605 OrfB family
LDCKNKGH_01572 1.8e-43 L Transposase IS200 like
LDCKNKGH_01573 7.4e-242 gabT 2.6.1.19 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LDCKNKGH_01574 1.5e-240 yfnA E amino acid
LDCKNKGH_01575 3.9e-69 S NADPH-dependent FMN reductase
LDCKNKGH_01577 2.2e-156 L Thioesterase-like superfamily
LDCKNKGH_01578 2.1e-260 argH 4.3.2.1 E argininosuccinate lyase
LDCKNKGH_01579 1.8e-237 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
LDCKNKGH_01580 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LDCKNKGH_01581 7.1e-101 K Transcriptional regulator
LDCKNKGH_01582 2.7e-23 XK27_06785 V ABC transporter
LDCKNKGH_01583 2.1e-167 M Membrane
LDCKNKGH_01584 2.2e-52 S FMN_bind
LDCKNKGH_01585 0.0 yhcA V ABC transporter, ATP-binding protein
LDCKNKGH_01586 6.1e-123 bm3R1 K Bacterial regulatory proteins, tetR family
LDCKNKGH_01587 3.7e-243 dxs 2.2.1.7 HI 1-deoxy-D-xylulose-5-phosphate synthase
LDCKNKGH_01588 1e-195 L transposase, IS605 OrfB family
LDCKNKGH_01589 3.3e-33 L transposase, IS605 OrfB family
LDCKNKGH_01590 6.9e-83 tlpA2 L Transposase IS200 like
LDCKNKGH_01591 2.2e-54 ybjQ S Belongs to the UPF0145 family
LDCKNKGH_01592 5.3e-30 rocF 3.5.3.1, 3.5.3.11 E Arginase family
LDCKNKGH_01593 1.5e-26 rocF 3.5.3.1, 3.5.3.11 E Arginase family
LDCKNKGH_01595 6.7e-173 1.3.1.9 S Nitronate monooxygenase
LDCKNKGH_01596 4.7e-54 K Helix-turn-helix domain
LDCKNKGH_01597 1.2e-105 S Domain of unknown function (DUF4767)
LDCKNKGH_01598 5.4e-82
LDCKNKGH_01599 0.0 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
LDCKNKGH_01600 0.0 norZ 1.7.2.5 P Cytochrome C and Quinol oxidase polypeptide I
LDCKNKGH_01601 3.2e-107 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
LDCKNKGH_01602 1.8e-136 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
LDCKNKGH_01603 9.2e-115 2.7.6.5 T Region found in RelA / SpoT proteins
LDCKNKGH_01604 8e-80 K response regulator
LDCKNKGH_01605 6.3e-34 sptS 2.7.13.3 T Histidine kinase
LDCKNKGH_01606 3.9e-226 tnp L MULE transposase domain
LDCKNKGH_01607 1e-86 sptS 2.7.13.3 T Histidine kinase
LDCKNKGH_01608 5.3e-175 coaA 2.7.1.33 F Pantothenic acid kinase
LDCKNKGH_01609 2.3e-104 2.3.1.128 K acetyltransferase
LDCKNKGH_01610 3.4e-135 IQ Dehydrogenase reductase
LDCKNKGH_01611 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
LDCKNKGH_01612 3.6e-160 EG EamA-like transporter family
LDCKNKGH_01613 0.0 helD 3.6.4.12 L DNA helicase
LDCKNKGH_01614 4.3e-118 dedA S SNARE associated Golgi protein
LDCKNKGH_01615 4e-121 pgm7 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
LDCKNKGH_01616 5e-232 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LDCKNKGH_01617 4.7e-210 menC 4.2.1.113 H Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)
LDCKNKGH_01618 2.3e-133 pnuC H nicotinamide mononucleotide transporter
LDCKNKGH_01619 6.6e-298 ybeC E amino acid
LDCKNKGH_01620 5.3e-207 V domain protein
LDCKNKGH_01621 1.9e-92 K Transcriptional regulator (TetR family)
LDCKNKGH_01622 8.1e-188 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
LDCKNKGH_01623 6.3e-168
LDCKNKGH_01625 4e-83 zur P Belongs to the Fur family
LDCKNKGH_01626 1.7e-105 gmk2 2.7.4.8 F Guanylate kinase
LDCKNKGH_01627 1.3e-72 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
LDCKNKGH_01628 1.2e-63 yfnA E Amino Acid
LDCKNKGH_01629 1.8e-136 yfnA E Amino Acid
LDCKNKGH_01630 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
LDCKNKGH_01631 3.1e-178 3.4.11.5 E Releases the N-terminal proline from various substrates
LDCKNKGH_01632 2.3e-116 gph 3.1.3.18 S HAD hydrolase, family IA, variant
LDCKNKGH_01633 5e-275 S Uncharacterized protein conserved in bacteria (DUF2325)
LDCKNKGH_01634 1.2e-182 1.17.4.1 F Ribonucleotide reductase, small chain
LDCKNKGH_01635 9.7e-169 nrdF 1.17.4.1 F Ribonucleotide reductase, small chain
LDCKNKGH_01636 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LDCKNKGH_01637 1.4e-83 nrdI F NrdI Flavodoxin like
LDCKNKGH_01638 5.1e-110 M ErfK YbiS YcfS YnhG
LDCKNKGH_01640 8.9e-206 nrnB S DHHA1 domain
LDCKNKGH_01641 2.2e-290 S ABC transporter, ATP-binding protein
LDCKNKGH_01642 7e-181 ABC-SBP S ABC transporter
LDCKNKGH_01643 6.6e-138 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
LDCKNKGH_01644 1.4e-133 XK27_08845 S ABC transporter, ATP-binding protein
LDCKNKGH_01646 9.7e-225 amtB P ammonium transporter
LDCKNKGH_01647 4.3e-234 mepA V MATE efflux family protein
LDCKNKGH_01648 8.4e-170 scrK 2.7.1.2, 2.7.1.4 GK ROK family
LDCKNKGH_01649 4.3e-258 pgi 5.3.1.9 G Belongs to the GPI family
LDCKNKGH_01650 8.8e-184 fruR3 K Transcriptional regulator, LacI family
LDCKNKGH_01651 5e-162 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
LDCKNKGH_01652 2.6e-166 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LDCKNKGH_01653 1e-56 trxA1 O Belongs to the thioredoxin family
LDCKNKGH_01654 5.2e-142 terC P membrane
LDCKNKGH_01655 9.3e-169 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LDCKNKGH_01656 1e-170 corA P CorA-like Mg2+ transporter protein
LDCKNKGH_01657 8.4e-230 pbuX F xanthine permease
LDCKNKGH_01658 1.9e-150 qorB 1.6.5.2 GM NmrA-like family
LDCKNKGH_01659 7.2e-126 pgm3 G phosphoglycerate mutase family
LDCKNKGH_01660 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
LDCKNKGH_01661 2e-85
LDCKNKGH_01662 1.8e-108 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
LDCKNKGH_01663 8.8e-101 dps P Belongs to the Dps family
LDCKNKGH_01664 2.8e-32 copZ P Heavy-metal-associated domain
LDCKNKGH_01665 0.0 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
LDCKNKGH_01666 4.4e-183 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
LDCKNKGH_01667 2e-180 iunH2 3.2.2.1 F nucleoside hydrolase
LDCKNKGH_01668 1.6e-100 S ABC-type cobalt transport system, permease component
LDCKNKGH_01669 1.9e-256 cbiO1 S ABC transporter, ATP-binding protein
LDCKNKGH_01670 1e-111 P Cobalt transport protein
LDCKNKGH_01671 1.2e-16 yvlA
LDCKNKGH_01672 0.0 yjcE P Sodium proton antiporter
LDCKNKGH_01673 1.1e-192 lplA2 6.3.1.20 H Bacterial lipoate protein ligase C-terminus
LDCKNKGH_01674 1.6e-73 O OsmC-like protein
LDCKNKGH_01675 1.8e-186 D Alpha beta
LDCKNKGH_01676 8.4e-75 K Transcriptional regulator
LDCKNKGH_01677 4.5e-160
LDCKNKGH_01678 6.6e-20
LDCKNKGH_01679 2.1e-59
LDCKNKGH_01680 3.1e-75 uspA T universal stress protein
LDCKNKGH_01682 9.7e-130 qmcA O prohibitin homologues
LDCKNKGH_01683 5.5e-245 glpT G Major Facilitator Superfamily
LDCKNKGH_01684 0.0 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LDCKNKGH_01685 6.7e-136 tal 2.2.1.2 H Transaldolase/Fructose-6-phosphate aldolase
LDCKNKGH_01686 1.1e-23 L Helix-turn-helix domain
LDCKNKGH_01687 1.1e-166 L PFAM Integrase catalytic region
LDCKNKGH_01688 1.7e-125 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LDCKNKGH_01689 5.3e-120 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LDCKNKGH_01690 6.2e-185 hoxN U High-affinity nickel-transport protein
LDCKNKGH_01691 1.7e-148 larE S NAD synthase
LDCKNKGH_01692 4.5e-129 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
LDCKNKGH_01693 2.4e-216 larC 4.99.1.12 S Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
LDCKNKGH_01694 1.7e-131 cpmA S AIR carboxylase
LDCKNKGH_01695 3.6e-241 larA 5.1.2.1 S Domain of unknown function (DUF2088)
LDCKNKGH_01696 7e-124 K Crp-like helix-turn-helix domain
LDCKNKGH_01697 6.4e-90 L Transposase
LDCKNKGH_01698 2.5e-66 L Transposase
LDCKNKGH_01699 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LDCKNKGH_01700 2.7e-244 fucP G Major Facilitator Superfamily
LDCKNKGH_01701 2.1e-67 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
LDCKNKGH_01702 2.5e-164 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LDCKNKGH_01703 1.2e-169 deoR K sugar-binding domain protein
LDCKNKGH_01704 9.8e-115 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
LDCKNKGH_01705 1.1e-200 S Domain of unknown function (DUF4432)
LDCKNKGH_01706 3.2e-175 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LDCKNKGH_01707 9.8e-261 G PTS system Galactitol-specific IIC component
LDCKNKGH_01708 1.7e-187 K helix_turn _helix lactose operon repressor
LDCKNKGH_01709 1.4e-281 yjeM E Amino Acid
LDCKNKGH_01711 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
LDCKNKGH_01712 1.1e-149 ybjI 3.1.3.102, 3.1.3.104, 3.1.3.23 S haloacid dehalogenase-like hydrolase
LDCKNKGH_01713 6.4e-131 gntR K UbiC transcription regulator-associated domain protein
LDCKNKGH_01714 7.1e-89 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LDCKNKGH_01715 3.2e-130
LDCKNKGH_01716 2.3e-265 pipD E Dipeptidase
LDCKNKGH_01717 2.6e-157 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
LDCKNKGH_01718 3.4e-86 M1-874 K Domain of unknown function (DUF1836)
LDCKNKGH_01719 8.8e-90 GM epimerase
LDCKNKGH_01720 3.6e-252 yhdP S Transporter associated domain
LDCKNKGH_01721 2.4e-83 nrdI F Belongs to the NrdI family
LDCKNKGH_01722 6.5e-75 S 3-demethylubiquinone-9 3-methyltransferase
LDCKNKGH_01723 1.1e-206 yeaN P Transporter, major facilitator family protein
LDCKNKGH_01724 7.5e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LDCKNKGH_01725 9.2e-275 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LDCKNKGH_01726 1.4e-81 uspA T universal stress protein
LDCKNKGH_01727 1.9e-77 K AsnC family
LDCKNKGH_01728 3.3e-138 IQ Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LDCKNKGH_01729 2.1e-177 K helix_turn _helix lactose operon repressor
LDCKNKGH_01730 0.0 pepF E oligoendopeptidase F
LDCKNKGH_01731 5.4e-234 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
LDCKNKGH_01732 7e-124 S Membrane
LDCKNKGH_01733 3.9e-147 L 4.5 Transposon and IS
LDCKNKGH_01734 3.2e-225 L Transposase
LDCKNKGH_01735 2.2e-22 L hmm pf00665
LDCKNKGH_01736 2.4e-121 ribA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LDCKNKGH_01737 3.6e-224 L Transposase
LDCKNKGH_01738 5.1e-170 tnp L MULE transposase domain
LDCKNKGH_01739 6.3e-168 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
LDCKNKGH_01740 6.4e-99 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
LDCKNKGH_01741 1e-170 tnp L MULE transposase domain
LDCKNKGH_01742 8.5e-102 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
LDCKNKGH_01743 9.1e-116 devA 3.6.3.25 V ABC transporter, ATP-binding protein
LDCKNKGH_01744 4.2e-160 hrtB V ABC transporter permease
LDCKNKGH_01745 1.1e-225 L Transposase
LDCKNKGH_01746 2.9e-73 crtB 2.5.1.32, 2.5.1.99 I Squalene/phytoene synthase
LDCKNKGH_01747 9.4e-56 L Helix-turn-helix domain
LDCKNKGH_01748 6e-157 L hmm pf00665
LDCKNKGH_01749 2.9e-182 galR K Transcriptional regulator
LDCKNKGH_01750 6.9e-286 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
LDCKNKGH_01751 7.9e-224 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
LDCKNKGH_01752 7.7e-185 celE 3.2.1.4 GH5,GH9 E GDSL-like Lipase/Acylhydrolase family
LDCKNKGH_01753 1.6e-143 ptp3 3.1.3.48 T Tyrosine phosphatase family
LDCKNKGH_01754 1e-95 yxkA S Phosphatidylethanolamine-binding protein
LDCKNKGH_01755 6.9e-36
LDCKNKGH_01756 2.5e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
LDCKNKGH_01757 5.3e-119 tcyB U Binding-protein-dependent transport system inner membrane component
LDCKNKGH_01758 5.7e-141 tcyA ET Belongs to the bacterial solute-binding protein 3 family
LDCKNKGH_01759 2e-52
LDCKNKGH_01760 2e-169 MA20_03535 1.1.1.399, 1.1.1.95 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LDCKNKGH_01761 1.7e-79 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LDCKNKGH_01762 3.4e-146 pnuC H nicotinamide mononucleotide transporter
LDCKNKGH_01763 1.1e-92 ymdB S Macro domain protein
LDCKNKGH_01764 0.0 pepO 3.4.24.71 O Peptidase family M13
LDCKNKGH_01765 1.8e-229 pbuG S permease
LDCKNKGH_01766 2.1e-45
LDCKNKGH_01767 2.1e-216 S Putative metallopeptidase domain
LDCKNKGH_01768 8e-205 3.1.3.1 S associated with various cellular activities
LDCKNKGH_01769 1.3e-116 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
LDCKNKGH_01770 6.8e-65 yeaO S Protein of unknown function, DUF488
LDCKNKGH_01772 4.8e-125 yrkL S Flavodoxin-like fold
LDCKNKGH_01773 1.5e-55
LDCKNKGH_01774 2.2e-108 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
LDCKNKGH_01775 1e-96 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LDCKNKGH_01776 3.2e-102
LDCKNKGH_01777 9.5e-26
LDCKNKGH_01778 1.3e-182 scrR K Transcriptional regulator, LacI family
LDCKNKGH_01779 9.2e-175 acm2 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
LDCKNKGH_01780 7.6e-46 czrA K Transcriptional regulator, ArsR family
LDCKNKGH_01781 1.8e-75 argR K Regulates arginine biosynthesis genes
LDCKNKGH_01782 6.7e-122 devA 3.6.3.25 V ABC transporter, ATP-binding protein
LDCKNKGH_01783 7.3e-157 hrtB V ABC transporter permease
LDCKNKGH_01784 1.1e-107 ygfC K Bacterial regulatory proteins, tetR family
LDCKNKGH_01785 7.9e-70 tdh 1.1.1.14 E Alcohol dehydrogenase GroES-like domain
LDCKNKGH_01786 1.4e-21
LDCKNKGH_01787 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LDCKNKGH_01788 5.3e-70 L nuclease
LDCKNKGH_01789 4.9e-162 F DNA/RNA non-specific endonuclease
LDCKNKGH_01790 1.9e-112 lepB 3.4.21.89 U Belongs to the peptidase S26 family
LDCKNKGH_01791 2.9e-290 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LDCKNKGH_01792 3e-292 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LDCKNKGH_01793 0.0 asnB 6.3.5.4 E Asparagine synthase
LDCKNKGH_01794 3.9e-102 lysP E amino acid
LDCKNKGH_01795 4e-95 lysP E amino acid
LDCKNKGH_01796 2.7e-48 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
LDCKNKGH_01797 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
LDCKNKGH_01798 2.1e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
LDCKNKGH_01799 4.8e-154 jag S R3H domain protein
LDCKNKGH_01800 3.4e-144 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LDCKNKGH_01801 1.4e-56 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
LDCKNKGH_01802 2.6e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)