ORF_ID e_value Gene_name EC_number CAZy COGs Description
CLDFGBKD_00001 9.6e-231 S Putative ABC-transporter type IV
CLDFGBKD_00002 0.0 pip S YhgE Pip domain protein
CLDFGBKD_00003 3e-309 pip S YhgE Pip domain protein
CLDFGBKD_00004 3.2e-104 K Psort location Cytoplasmic, score 8.87
CLDFGBKD_00005 2.8e-65 S FMN_bind
CLDFGBKD_00006 2.6e-146 macB V ABC transporter, ATP-binding protein
CLDFGBKD_00007 3.1e-215 Z012_06715 V FtsX-like permease family
CLDFGBKD_00008 1.4e-213 macB_2 V ABC transporter permease
CLDFGBKD_00009 9.1e-226 S Predicted membrane protein (DUF2318)
CLDFGBKD_00010 5.5e-108 tpd P Fe2+ transport protein
CLDFGBKD_00011 0.0 efeU_1 P Iron permease FTR1 family
CLDFGBKD_00012 2.3e-311
CLDFGBKD_00014 2.2e-96 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
CLDFGBKD_00015 2.2e-135 yoaK S Protein of unknown function (DUF1275)
CLDFGBKD_00016 1.8e-68
CLDFGBKD_00019 8.8e-292 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CLDFGBKD_00020 3.3e-55 V Abi-like protein
CLDFGBKD_00022 2.7e-144 S Protein of unknown function (DUF805)
CLDFGBKD_00023 3.6e-165 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
CLDFGBKD_00024 2.2e-157
CLDFGBKD_00025 9.9e-123 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
CLDFGBKD_00026 2.5e-259 EGP Major facilitator Superfamily
CLDFGBKD_00027 2.5e-203 rnr 3.6.4.12 K Putative DNA-binding domain
CLDFGBKD_00028 2.4e-95 S GtrA-like protein
CLDFGBKD_00029 5.1e-62 S Macrophage migration inhibitory factor (MIF)
CLDFGBKD_00030 5.7e-291 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
CLDFGBKD_00031 0.0 pepD E Peptidase family C69
CLDFGBKD_00032 2.1e-105 S Phosphatidylethanolamine-binding protein
CLDFGBKD_00033 4.7e-291 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CLDFGBKD_00035 3.3e-37 ptsH G PTS HPr component phosphorylation site
CLDFGBKD_00036 1.7e-100 K helix_turn _helix lactose operon repressor
CLDFGBKD_00037 4.9e-202 holB 2.7.7.7 L DNA polymerase III
CLDFGBKD_00038 4e-122 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CLDFGBKD_00039 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CLDFGBKD_00040 7.3e-167 3.6.1.27 I PAP2 superfamily
CLDFGBKD_00041 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
CLDFGBKD_00042 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CLDFGBKD_00043 7.4e-310 S Calcineurin-like phosphoesterase
CLDFGBKD_00044 3.9e-113
CLDFGBKD_00045 3.9e-209 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CLDFGBKD_00046 8e-97 askB 1.1.1.3, 2.7.2.4 E ACT domain
CLDFGBKD_00047 2.3e-131 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
CLDFGBKD_00048 2.8e-53 S Psort location Cytoplasmic, score
CLDFGBKD_00049 9.4e-198 3.4.22.70 M Sortase family
CLDFGBKD_00050 1.9e-109 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CLDFGBKD_00051 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
CLDFGBKD_00052 9e-99 K Bacterial regulatory proteins, tetR family
CLDFGBKD_00053 1.2e-213 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
CLDFGBKD_00054 1.5e-53 S TIGRFAM helicase secretion neighborhood TadE-like protein
CLDFGBKD_00055 4.6e-40 S Protein of unknown function (DUF4244)
CLDFGBKD_00056 4.8e-100 gspF NU Type II secretion system (T2SS), protein F
CLDFGBKD_00057 5.4e-105 U Type ii secretion system
CLDFGBKD_00058 3.6e-191 cpaF U Type II IV secretion system protein
CLDFGBKD_00059 2.9e-93 cpaE D bacterial-type flagellum organization
CLDFGBKD_00060 6.1e-134 dedA S SNARE associated Golgi protein
CLDFGBKD_00061 5.3e-124 S HAD hydrolase, family IA, variant 3
CLDFGBKD_00062 3.6e-140 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
CLDFGBKD_00063 2.7e-229 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
CLDFGBKD_00064 6.4e-207 luxE 6.2.1.19 H long-chain-fatty-acid--luciferin-component ligase, acyl-protein synthase
CLDFGBKD_00065 1.7e-214 F Psort location CytoplasmicMembrane, score 10.00
CLDFGBKD_00066 3.4e-98 hspR K transcriptional regulator, MerR family
CLDFGBKD_00067 1.3e-169 dnaJ1 O DnaJ molecular chaperone homology domain
CLDFGBKD_00068 3.1e-55 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CLDFGBKD_00069 0.0 dnaK O Heat shock 70 kDa protein
CLDFGBKD_00070 0.0 phoA 3.1.3.1, 3.1.3.39 P Alkaline phosphatase homologues
CLDFGBKD_00071 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
CLDFGBKD_00072 2.9e-185 K Psort location Cytoplasmic, score
CLDFGBKD_00073 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
CLDFGBKD_00074 1.9e-56 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CLDFGBKD_00075 2.2e-107 2.7.7.7 L Transposase, Mutator family
CLDFGBKD_00076 1.8e-65 S Glycosyltransferase like family 2
CLDFGBKD_00077 1.7e-32 MA20_17390 GT4 M Glycosyl transferases group 1
CLDFGBKD_00078 4.7e-261 epsK S polysaccharide biosynthetic process
CLDFGBKD_00079 2.6e-99 L Psort location Cytoplasmic, score 8.87
CLDFGBKD_00082 8.2e-84 2.7.11.1 S HipA-like C-terminal domain
CLDFGBKD_00084 1.7e-11 L Transposase and inactivated derivatives IS30 family
CLDFGBKD_00085 5.8e-96
CLDFGBKD_00087 0.0 XK27_00515 D Cell surface antigen C-terminus
CLDFGBKD_00088 0.0 trxB1 1.8.1.9 C Thioredoxin domain
CLDFGBKD_00089 9.5e-239 yhjX EGP Major facilitator Superfamily
CLDFGBKD_00090 2.2e-40 S Psort location Cytoplasmic, score
CLDFGBKD_00091 5.1e-193 G Bacterial extracellular solute-binding protein
CLDFGBKD_00092 1.6e-123 3.2.1.18, 3.2.1.51 GH29,GH33 G BNR repeat-like domain
CLDFGBKD_00093 3.5e-137 nanL 4.3.3.7 EM Dihydrodipicolinate synthetase family
CLDFGBKD_00094 3.5e-26 G Bacterial extracellular solute-binding protein
CLDFGBKD_00095 1e-103 V ATPases associated with a variety of cellular activities
CLDFGBKD_00096 8.1e-173
CLDFGBKD_00097 4.2e-25 V ABC-2 family transporter protein
CLDFGBKD_00099 4.4e-24 2.1.1.72 S Adenine-specific methyltransferase EcoRI
CLDFGBKD_00100 3.3e-94 L Psort location Cytoplasmic, score 8.87
CLDFGBKD_00101 3.4e-26 S Bacterial toxin of type II toxin-antitoxin system, YafQ
CLDFGBKD_00102 4.3e-50 EGP Transmembrane secretion effector
CLDFGBKD_00103 6e-35 K helix_turn_helix, Lux Regulon
CLDFGBKD_00104 5e-16 2.7.13.3 T Histidine kinase
CLDFGBKD_00105 3.3e-181 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CLDFGBKD_00106 1.2e-114
CLDFGBKD_00107 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CLDFGBKD_00108 2.8e-45
CLDFGBKD_00109 2.1e-160 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
CLDFGBKD_00110 5e-263 pepC 3.4.22.40 E Peptidase C1-like family
CLDFGBKD_00111 2e-175 appB EP Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00112 9.2e-173 dppC EP N-terminal TM domain of oligopeptide transport permease C
CLDFGBKD_00113 0.0 oppD P Belongs to the ABC transporter superfamily
CLDFGBKD_00114 0.0 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
CLDFGBKD_00115 1e-249 EGP Major Facilitator Superfamily
CLDFGBKD_00116 4.7e-268 S AAA domain
CLDFGBKD_00117 0.0 lacZ 3.2.1.23 G Beta-galactosidase trimerisation domain
CLDFGBKD_00118 6.2e-196 K helix_turn _helix lactose operon repressor
CLDFGBKD_00119 3.1e-242 G Bacterial extracellular solute-binding protein
CLDFGBKD_00120 3.3e-175 U Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00121 1.1e-153 U Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00122 1.5e-204 G Glycosyl hydrolases family 43
CLDFGBKD_00123 5e-251 S Domain of unknown function (DUF4143)
CLDFGBKD_00124 3.3e-269 S ATPase domain predominantly from Archaea
CLDFGBKD_00125 0.0 mdlA2 V ABC transporter
CLDFGBKD_00126 0.0 yknV V ABC transporter
CLDFGBKD_00127 1.9e-195 S Fic/DOC family
CLDFGBKD_00128 1.3e-17 L HTH-like domain
CLDFGBKD_00129 1.8e-106 XK27_00240 K Fic/DOC family
CLDFGBKD_00130 5.5e-28 K helix_turn_helix, arabinose operon control protein
CLDFGBKD_00131 4.4e-89 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
CLDFGBKD_00132 1e-62 2.7.1.2 GK ROK family
CLDFGBKD_00133 8.2e-114 xylE U Sugar (and other) transporter
CLDFGBKD_00134 5.4e-153 lipA I Hydrolase, alpha beta domain protein
CLDFGBKD_00136 2e-185 tatD L TatD related DNase
CLDFGBKD_00137 0.0 kup P Transport of potassium into the cell
CLDFGBKD_00138 5e-159 S Glutamine amidotransferase domain
CLDFGBKD_00139 2e-134 T HD domain
CLDFGBKD_00140 2.7e-181 V ABC transporter
CLDFGBKD_00141 2e-211 V ABC transporter permease
CLDFGBKD_00142 0.0 pflA S Protein of unknown function (DUF4012)
CLDFGBKD_00143 3.2e-199 I transferase activity, transferring acyl groups other than amino-acyl groups
CLDFGBKD_00144 2.9e-201 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
CLDFGBKD_00145 2.9e-232 1.1.1.22 M UDP binding domain
CLDFGBKD_00146 0.0 wbbM M Glycosyl transferase family 8
CLDFGBKD_00147 1.2e-133 rgpC U Transport permease protein
CLDFGBKD_00148 1.2e-169 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
CLDFGBKD_00149 0.0 wbbM M Glycosyl transferase family 8
CLDFGBKD_00150 1.1e-157
CLDFGBKD_00151 9.4e-263
CLDFGBKD_00152 3.6e-165 I Acyltransferase family
CLDFGBKD_00153 2.1e-171 rfbJ M Glycosyl transferase family 2
CLDFGBKD_00154 2.8e-174 srrA1 G Bacterial extracellular solute-binding protein
CLDFGBKD_00155 4.4e-122 G Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00156 2.7e-125 lacG G Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00157 3.3e-183 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
CLDFGBKD_00158 3.6e-224 glf 5.4.99.9 M UDP-galactopyranose mutase
CLDFGBKD_00159 4.5e-157 fahA Q Fumarylacetoacetate (FAA) hydrolase family
CLDFGBKD_00160 7.5e-74 2.3.1.57 K Acetyltransferase (GNAT) domain
CLDFGBKD_00161 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
CLDFGBKD_00162 4.7e-156 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
CLDFGBKD_00163 2.3e-158 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
CLDFGBKD_00164 1.3e-131 ugpA P Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00165 3.6e-128 ugpE G Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00166 3.4e-202 G Bacterial extracellular solute-binding protein
CLDFGBKD_00167 6.1e-93 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
CLDFGBKD_00170 2.2e-08 S Protein of unknown function (DUF2815)
CLDFGBKD_00171 5.3e-34 V Pfam HNH endonuclease
CLDFGBKD_00172 1.3e-09
CLDFGBKD_00175 5.5e-24 hutG 3.5.3.8 E N-formylglutamate amidohydrolase
CLDFGBKD_00177 4e-77 L endonuclease I
CLDFGBKD_00178 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
CLDFGBKD_00179 1.7e-21 S N-methyltransferase activity
CLDFGBKD_00182 1.7e-75 int L Phage integrase, N-terminal SAM-like domain
CLDFGBKD_00183 5.8e-19 int L Phage integrase, N-terminal SAM-like domain
CLDFGBKD_00184 5.3e-237 3.2.1.24 GH38 G Alpha mannosidase, middle domain
CLDFGBKD_00186 6.3e-51 3.2.1.24 GH38 G Alpha mannosidase, middle domain
CLDFGBKD_00187 1.8e-114
CLDFGBKD_00188 5.6e-103
CLDFGBKD_00191 8.9e-26 dexB 2.4.1.7, 3.2.1.20, 3.2.1.51, 3.2.1.70, 3.2.1.93, 3.2.1.97 GH101,GH13,GH29,GH31 G hydrolase activity, hydrolyzing O-glycosyl compounds
CLDFGBKD_00192 1.3e-96 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
CLDFGBKD_00193 7.1e-22 araE EGP Major facilitator Superfamily
CLDFGBKD_00194 0.0 fadD 6.2.1.3 I AMP-binding enzyme
CLDFGBKD_00195 3.6e-102 uhpT EGP Major facilitator Superfamily
CLDFGBKD_00196 5.6e-68 G beta-galactosidase
CLDFGBKD_00197 1.4e-20 G beta-galactosidase
CLDFGBKD_00198 2.1e-07 G beta-galactosidase
CLDFGBKD_00199 9.7e-17
CLDFGBKD_00202 2.1e-210 K helix_turn _helix lactose operon repressor
CLDFGBKD_00203 2.4e-145 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CLDFGBKD_00205 2.5e-139 lepB 3.4.21.89 U Belongs to the peptidase S26 family
CLDFGBKD_00206 1.1e-59 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
CLDFGBKD_00207 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00208 4.3e-256 abcT3 P ATPases associated with a variety of cellular activities
CLDFGBKD_00209 0.0 pgi 5.3.1.9 G Belongs to the GPI family
CLDFGBKD_00212 6.2e-169 S Auxin Efflux Carrier
CLDFGBKD_00213 1.5e-223 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
CLDFGBKD_00214 1e-240 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
CLDFGBKD_00215 2.3e-213 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
CLDFGBKD_00217 3.5e-132 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CLDFGBKD_00218 1.6e-143 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CLDFGBKD_00219 2.9e-159
CLDFGBKD_00220 4e-248 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CLDFGBKD_00221 7.2e-115
CLDFGBKD_00222 6.3e-70 soxR K MerR, DNA binding
CLDFGBKD_00223 5.8e-191 yghZ C Aldo/keto reductase family
CLDFGBKD_00224 2e-51 S Protein of unknown function (DUF3039)
CLDFGBKD_00225 4.6e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CLDFGBKD_00226 2e-118
CLDFGBKD_00227 1.4e-118 yceD S Uncharacterized ACR, COG1399
CLDFGBKD_00228 7.6e-31 rpmF J Belongs to the bacterial ribosomal protein bL32 family
CLDFGBKD_00229 4.9e-131 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
CLDFGBKD_00230 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
CLDFGBKD_00231 1.7e-91 ilvN 2.2.1.6 E ACT domain
CLDFGBKD_00232 2.1e-42 stbC S Plasmid stability protein
CLDFGBKD_00233 7.3e-63 vapC S Toxic component of a toxin-antitoxin (TA) module. An RNase
CLDFGBKD_00234 0.0 yjjK S ABC transporter
CLDFGBKD_00235 4.1e-137 guaA1 6.3.5.2 F Peptidase C26
CLDFGBKD_00236 9.1e-311 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
CLDFGBKD_00237 3.9e-162 P Cation efflux family
CLDFGBKD_00238 1.7e-259 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CLDFGBKD_00239 1.2e-165 S Endonuclease/Exonuclease/phosphatase family
CLDFGBKD_00240 2.5e-80 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
CLDFGBKD_00241 1.9e-236 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CLDFGBKD_00242 5.2e-113 ribE 2.5.1.9 H Lumazine binding domain
CLDFGBKD_00243 1.7e-212 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CLDFGBKD_00244 1.9e-269 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH chorismate binding enzyme
CLDFGBKD_00245 2.4e-139 pabC 2.6.1.42, 2.6.1.85, 4.1.3.38 E branched-chain-amino-acid transaminase activity
CLDFGBKD_00246 4.1e-59 rpsP J Belongs to the bacterial ribosomal protein bS16 family
CLDFGBKD_00247 6.1e-35 CP_0960 S Belongs to the UPF0109 family
CLDFGBKD_00248 6.8e-110 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CLDFGBKD_00249 2.8e-45 K Helix-turn-helix XRE-family like proteins
CLDFGBKD_00250 4.6e-166 2.7.11.1 S Pfam:HipA_N
CLDFGBKD_00251 1.8e-226
CLDFGBKD_00252 7.6e-112 U Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00253 1.6e-118 U Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00254 4.1e-141 G Bacterial extracellular solute-binding protein
CLDFGBKD_00255 5.6e-122 K helix_turn _helix lactose operon repressor
CLDFGBKD_00256 8.5e-193 iunH1 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
CLDFGBKD_00257 1.6e-168 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
CLDFGBKD_00258 7.9e-16
CLDFGBKD_00259 5.3e-53 S Predicted membrane protein (DUF2207)
CLDFGBKD_00260 3.4e-103 S Predicted membrane protein (DUF2207)
CLDFGBKD_00261 2.2e-12 S Predicted membrane protein (DUF2207)
CLDFGBKD_00262 0.0 S Predicted membrane protein (DUF2207)
CLDFGBKD_00263 6.7e-91 lemA S LemA family
CLDFGBKD_00264 1.2e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CLDFGBKD_00265 1.1e-168 pstA P Phosphate transport system permease
CLDFGBKD_00266 3.5e-153 pstC P probably responsible for the translocation of the substrate across the membrane
CLDFGBKD_00267 4e-180 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
CLDFGBKD_00268 1.8e-139 KT Transcriptional regulatory protein, C terminal
CLDFGBKD_00269 4.8e-204 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
CLDFGBKD_00270 2.8e-230 EGP Sugar (and other) transporter
CLDFGBKD_00271 4.8e-123 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CLDFGBKD_00272 4e-234 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CLDFGBKD_00273 9.4e-214 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CLDFGBKD_00274 3.3e-266 pepC 3.4.22.40 E Peptidase C1-like family
CLDFGBKD_00275 2e-57 D nuclear chromosome segregation
CLDFGBKD_00276 3.5e-123 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CLDFGBKD_00277 3.3e-158 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
CLDFGBKD_00278 3.3e-183 yfiH Q Multi-copper polyphenol oxidoreductase laccase
CLDFGBKD_00279 1.7e-293 yegQ O Peptidase family U32 C-terminal domain
CLDFGBKD_00280 2.1e-154 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
CLDFGBKD_00281 5.7e-98 rsmD 2.1.1.171 L Conserved hypothetical protein 95
CLDFGBKD_00282 1.5e-32 L Transposase DDE domain
CLDFGBKD_00283 6e-95
CLDFGBKD_00284 0.0 rfbP 2.7.8.6 M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
CLDFGBKD_00285 6.5e-171 P Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00286 3.1e-159 P Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00287 5.7e-137 int8 L Phage integrase family
CLDFGBKD_00288 1.8e-44 XK27_00240 K Fic/DOC family
CLDFGBKD_00290 4.4e-165 G Bacterial extracellular solute-binding protein
CLDFGBKD_00293 6.6e-200 K Transposase IS116 IS110 IS902
CLDFGBKD_00294 4.1e-121 V ATPases associated with a variety of cellular activities
CLDFGBKD_00295 1.6e-12 G Bacterial extracellular solute-binding protein
CLDFGBKD_00296 7e-111 G Bacterial extracellular solute-binding protein
CLDFGBKD_00297 1.6e-145 cobB2 K Sir2 family
CLDFGBKD_00298 1.5e-233 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
CLDFGBKD_00299 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
CLDFGBKD_00300 6.8e-09 L Transposase
CLDFGBKD_00301 2.9e-154 G Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00302 1.1e-143 malC G Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00303 1.3e-243 msmE7 G Bacterial extracellular solute-binding protein
CLDFGBKD_00304 3.5e-227 nagC GK ROK family
CLDFGBKD_00305 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
CLDFGBKD_00306 2.7e-82 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
CLDFGBKD_00307 0.0 yjcE P Sodium/hydrogen exchanger family
CLDFGBKD_00308 2.1e-148 ypfH S Phospholipase/Carboxylesterase
CLDFGBKD_00309 1.3e-127
CLDFGBKD_00310 3.4e-111 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
CLDFGBKD_00311 8.7e-80
CLDFGBKD_00312 3.2e-174 U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
CLDFGBKD_00313 1.7e-168 endOF2 3.2.1.14, 3.2.1.35, 3.2.1.52, 3.2.1.96 GH18,GH20 G Glycosyl hydrolase, family 20, catalytic domain
CLDFGBKD_00314 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
CLDFGBKD_00315 2e-16 K helix_turn _helix lactose operon repressor
CLDFGBKD_00316 4.1e-84 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
CLDFGBKD_00317 1.6e-288 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
CLDFGBKD_00318 1.1e-204 EGP Major facilitator Superfamily
CLDFGBKD_00319 2.4e-173 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CLDFGBKD_00320 1.2e-266 KLT Domain of unknown function (DUF4032)
CLDFGBKD_00321 1.8e-209 ugpC E Belongs to the ABC transporter superfamily
CLDFGBKD_00323 5.9e-219 2.4.1.166 GT2 M Glycosyltransferase like family 2
CLDFGBKD_00324 1.1e-189 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CLDFGBKD_00326 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CLDFGBKD_00327 7.8e-79 nrdI F Probably involved in ribonucleotide reductase function
CLDFGBKD_00328 4.1e-43 nrdH O Glutaredoxin
CLDFGBKD_00329 9.8e-276 KLT Protein tyrosine kinase
CLDFGBKD_00330 2.1e-121 O Thioredoxin
CLDFGBKD_00332 2.9e-210 S G5
CLDFGBKD_00333 4.5e-166 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
CLDFGBKD_00334 7.7e-177 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CLDFGBKD_00335 4.2e-107 S LytR cell envelope-related transcriptional attenuator
CLDFGBKD_00336 1.1e-275 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
CLDFGBKD_00337 1.3e-118 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
CLDFGBKD_00338 0.0
CLDFGBKD_00339 0.0 murJ KLT MviN-like protein
CLDFGBKD_00340 2.2e-185 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
CLDFGBKD_00341 2e-218 parB K Belongs to the ParB family
CLDFGBKD_00342 7.8e-177 parA D CobQ CobB MinD ParA nucleotide binding domain protein
CLDFGBKD_00343 4.2e-121 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
CLDFGBKD_00344 1.1e-92 jag S Putative single-stranded nucleic acids-binding domain
CLDFGBKD_00345 5.8e-175 yidC U Membrane protein insertase, YidC Oxa1 family
CLDFGBKD_00346 6.9e-33 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
CLDFGBKD_00347 2.6e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
CLDFGBKD_00348 4.6e-285 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CLDFGBKD_00349 2.9e-207 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
CLDFGBKD_00350 1.9e-223 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CLDFGBKD_00351 8.7e-81 S Protein of unknown function (DUF721)
CLDFGBKD_00352 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CLDFGBKD_00353 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CLDFGBKD_00354 1.2e-81 S Transmembrane domain of unknown function (DUF3566)
CLDFGBKD_00355 3.8e-273 S ATPase domain predominantly from Archaea
CLDFGBKD_00356 3.4e-14 K helix_turn _helix lactose operon repressor
CLDFGBKD_00357 1.9e-250 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
CLDFGBKD_00358 2.2e-26 S addiction module toxin, RelE StbE family
CLDFGBKD_00359 1.3e-28 relB L RelB antitoxin
CLDFGBKD_00360 1.1e-160 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
CLDFGBKD_00361 8.5e-10 V Type II restriction enzyme, methylase subunits
CLDFGBKD_00362 1.1e-145 G Bacterial extracellular solute-binding protein
CLDFGBKD_00363 4.7e-15 L Transposase and inactivated derivatives IS30 family
CLDFGBKD_00364 1.2e-56 L Transposase and inactivated derivatives IS30 family
CLDFGBKD_00365 2.2e-29 G Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00366 3.9e-152 G Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00368 8.7e-15 S VRR_NUC
CLDFGBKD_00371 1.3e-95 S Protein of unknown function, DUF624
CLDFGBKD_00373 4.5e-126 2.6.1.1 E Aminotransferase
CLDFGBKD_00374 5.4e-72
CLDFGBKD_00375 6.6e-155 F ATP-grasp domain
CLDFGBKD_00376 8.1e-78 G MFS/sugar transport protein
CLDFGBKD_00377 1.6e-94 F ATP-grasp domain
CLDFGBKD_00378 6.7e-88 6.3.5.5 HJ Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase)
CLDFGBKD_00379 4.6e-268 L PFAM Integrase catalytic
CLDFGBKD_00380 1.5e-241 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
CLDFGBKD_00381 5.5e-68 S Nucleotidyltransferase substrate binding protein like
CLDFGBKD_00382 3.6e-45 S Nucleotidyltransferase domain
CLDFGBKD_00383 1.9e-52 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
CLDFGBKD_00384 6.1e-254 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
CLDFGBKD_00385 2.5e-186 L Helix-turn-helix domain
CLDFGBKD_00386 2.1e-100 L Resolvase, N terminal domain
CLDFGBKD_00387 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
CLDFGBKD_00388 1.9e-143 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CLDFGBKD_00389 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
CLDFGBKD_00390 7.7e-255 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CLDFGBKD_00391 1.3e-42 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CLDFGBKD_00392 3.2e-233 S peptidyl-serine autophosphorylation
CLDFGBKD_00393 2.7e-91 ywrO 1.6.5.2 S Flavodoxin-like fold
CLDFGBKD_00394 0.0 fadD 6.2.1.3 I AMP-binding enzyme
CLDFGBKD_00395 1.3e-75 F Nucleoside 2-deoxyribosyltransferase
CLDFGBKD_00397 2.4e-185 S Endonuclease/Exonuclease/phosphatase family
CLDFGBKD_00398 3.1e-11 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
CLDFGBKD_00399 2.9e-08 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
CLDFGBKD_00400 3.3e-233 aspB E Aminotransferase class-V
CLDFGBKD_00401 1.9e-197 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
CLDFGBKD_00402 4.1e-84 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
CLDFGBKD_00403 2e-35 XK27_03610 K Acetyltransferase (GNAT) domain
CLDFGBKD_00404 1.1e-33
CLDFGBKD_00405 7.4e-80 S PFAM Uncharacterised protein family UPF0150
CLDFGBKD_00406 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
CLDFGBKD_00407 1.7e-212 K WYL domain
CLDFGBKD_00408 3.2e-144 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
CLDFGBKD_00409 1.7e-248 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
CLDFGBKD_00410 1.3e-151 map 3.4.11.18 E Methionine aminopeptidase
CLDFGBKD_00411 1.1e-98 S Short repeat of unknown function (DUF308)
CLDFGBKD_00412 0.0 pepO 3.4.24.71 O Peptidase family M13
CLDFGBKD_00413 1.3e-51 L Single-strand binding protein family
CLDFGBKD_00414 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
CLDFGBKD_00415 9e-29 GT87 NU Tfp pilus assembly protein FimV
CLDFGBKD_00416 1.6e-35 S AMMECR1
CLDFGBKD_00417 4.4e-269 recD2 3.6.4.12 L PIF1-like helicase
CLDFGBKD_00418 2.7e-117 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
CLDFGBKD_00419 4.9e-290 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
CLDFGBKD_00420 1.3e-203 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
CLDFGBKD_00421 1.5e-118 ywlC 2.7.7.87 J Belongs to the SUA5 family
CLDFGBKD_00422 1.5e-121 livF E ATPases associated with a variety of cellular activities
CLDFGBKD_00423 3.1e-153 E Branched-chain amino acid ATP-binding cassette transporter
CLDFGBKD_00424 7.2e-171 livM U Belongs to the binding-protein-dependent transport system permease family
CLDFGBKD_00425 1.2e-105 U Belongs to the binding-protein-dependent transport system permease family
CLDFGBKD_00426 3.6e-200 livK E Receptor family ligand binding region
CLDFGBKD_00427 8.5e-146 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
CLDFGBKD_00428 5.3e-190 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CLDFGBKD_00429 1.3e-36 rpmE J Binds the 23S rRNA
CLDFGBKD_00431 2.4e-68 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
CLDFGBKD_00432 4.1e-23 EGP Major Facilitator Superfamily
CLDFGBKD_00433 1.7e-21 EGP Major facilitator Superfamily
CLDFGBKD_00434 2.5e-144
CLDFGBKD_00435 8.9e-69 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
CLDFGBKD_00436 2.5e-163 dkgB S Oxidoreductase, aldo keto reductase family protein
CLDFGBKD_00437 9.5e-09 EGP Major facilitator superfamily
CLDFGBKD_00438 1.6e-36 EGP Major facilitator superfamily
CLDFGBKD_00439 1.9e-175 glkA 2.7.1.2 G ROK family
CLDFGBKD_00441 2.1e-292 EGP Major Facilitator Superfamily
CLDFGBKD_00442 8.9e-39 G Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00443 3.1e-75 2.7.7.49 L Transposase, Mutator family
CLDFGBKD_00445 9.9e-87 L PFAM Integrase catalytic
CLDFGBKD_00446 1.9e-59 G Bacterial extracellular solute-binding protein
CLDFGBKD_00447 5.6e-75 L IstB-like ATP binding protein
CLDFGBKD_00448 3.7e-21 G Bacterial extracellular solute-binding protein
CLDFGBKD_00449 2.6e-240 mloB K Putative DNA-binding domain
CLDFGBKD_00450 1.8e-18 L Transposase
CLDFGBKD_00451 6e-158 S AAA ATPase domain
CLDFGBKD_00452 0.0 yvnB 3.1.4.53 S Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CLDFGBKD_00453 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
CLDFGBKD_00454 1.2e-269 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
CLDFGBKD_00456 2.8e-168 hisN 3.1.3.25 G Inositol monophosphatase family
CLDFGBKD_00457 0.0 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
CLDFGBKD_00458 4.8e-285 arc O AAA ATPase forming ring-shaped complexes
CLDFGBKD_00459 1.7e-125 apl 3.1.3.1 S SNARE associated Golgi protein
CLDFGBKD_00460 1e-125 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
CLDFGBKD_00461 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CLDFGBKD_00462 1.2e-131 3.8.1.2 S Haloacid dehalogenase-like hydrolase
CLDFGBKD_00463 2.4e-181 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CLDFGBKD_00464 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
CLDFGBKD_00465 1.1e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
CLDFGBKD_00466 4.2e-228 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CLDFGBKD_00467 3.4e-218 vex3 V ABC transporter permease
CLDFGBKD_00468 3e-210 vex1 V Efflux ABC transporter, permease protein
CLDFGBKD_00469 3.2e-110 vex2 V ABC transporter, ATP-binding protein
CLDFGBKD_00470 1.1e-97 ptpA 3.1.3.48 T low molecular weight
CLDFGBKD_00471 2.8e-125 folA 1.5.1.3 H dihydrofolate reductase
CLDFGBKD_00473 1.1e-172 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CLDFGBKD_00474 6.9e-74 attW O OsmC-like protein
CLDFGBKD_00475 1.5e-189 T Universal stress protein family
CLDFGBKD_00476 9.7e-103 M NlpC/P60 family
CLDFGBKD_00477 1e-79 M NlpC/P60 family
CLDFGBKD_00478 1.8e-165 usp 3.5.1.28 CBM50 S CHAP domain
CLDFGBKD_00480 9.8e-211 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CLDFGBKD_00481 4.3e-37
CLDFGBKD_00482 1.1e-193 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
CLDFGBKD_00483 1.7e-114 phoU P Plays a role in the regulation of phosphate uptake
CLDFGBKD_00484 1.4e-138 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CLDFGBKD_00485 7.3e-18 pin L Resolvase, N terminal domain
CLDFGBKD_00486 7.9e-08 L Transposase, Mutator family
CLDFGBKD_00487 3.2e-17 C Cytochrome P450
CLDFGBKD_00488 1.6e-44 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
CLDFGBKD_00489 2.4e-33 2.7.7.73, 2.7.7.80 H ThiF family
CLDFGBKD_00491 7.1e-89 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
CLDFGBKD_00492 3.6e-54 yxaM EGP Major facilitator Superfamily
CLDFGBKD_00493 5.6e-127 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
CLDFGBKD_00494 0.0 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
CLDFGBKD_00496 9.8e-206 araJ EGP Major facilitator Superfamily
CLDFGBKD_00497 0.0 phoC 3.1.3.5 I PAP2 superfamily
CLDFGBKD_00498 9.5e-281 S Domain of unknown function (DUF4037)
CLDFGBKD_00499 4.4e-112 S Protein of unknown function (DUF4125)
CLDFGBKD_00500 2.5e-281 S alpha beta
CLDFGBKD_00501 1.9e-55
CLDFGBKD_00502 2.5e-168 pspC KT PspC domain
CLDFGBKD_00503 5.8e-225 tcsS3 KT PspC domain
CLDFGBKD_00504 2e-110 degU K helix_turn_helix, Lux Regulon
CLDFGBKD_00505 9.1e-184 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
CLDFGBKD_00506 1.2e-307 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
CLDFGBKD_00507 1.1e-187 mdsC 2.7.1.162, 2.7.1.39 S Phosphotransferase enzyme family
CLDFGBKD_00508 0.0 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
CLDFGBKD_00509 1.6e-150 G ABC transporter permease
CLDFGBKD_00510 1.9e-170 malC G Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00511 1.3e-246 G Bacterial extracellular solute-binding protein
CLDFGBKD_00513 3.3e-238 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CLDFGBKD_00514 2.7e-200 I Diacylglycerol kinase catalytic domain
CLDFGBKD_00515 2.4e-57 arbG K CAT RNA binding domain
CLDFGBKD_00516 1.8e-27 S Putative phage holin Dp-1
CLDFGBKD_00517 6e-141 rpsB J Belongs to the universal ribosomal protein uS2 family
CLDFGBKD_00518 1.7e-138 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CLDFGBKD_00519 1.9e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
CLDFGBKD_00520 5.4e-90 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
CLDFGBKD_00521 2.1e-169 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
CLDFGBKD_00522 1.5e-222 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
CLDFGBKD_00523 1.1e-74 3.5.1.124 S DJ-1/PfpI family
CLDFGBKD_00524 6.1e-140 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
CLDFGBKD_00525 2.1e-69 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CLDFGBKD_00526 7.4e-294 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CLDFGBKD_00527 9.7e-115 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CLDFGBKD_00528 1.5e-164 S Protein of unknown function (DUF979)
CLDFGBKD_00529 3.6e-118 S Protein of unknown function (DUF969)
CLDFGBKD_00530 1.6e-299 ybiT S ABC transporter
CLDFGBKD_00531 4.1e-127 yueD S Enoyl-(Acyl carrier protein) reductase
CLDFGBKD_00532 8.2e-162 2.1.1.72 S Protein conserved in bacteria
CLDFGBKD_00533 3.1e-32 S Zincin-like metallopeptidase
CLDFGBKD_00534 4.4e-32 G ATPases associated with a variety of cellular activities
CLDFGBKD_00535 6.1e-26 XK26_04485 P Cobalt transport protein
CLDFGBKD_00536 1.1e-17 XK27_08585 S Hypothetical bacterial integral membrane protein (Trep_Strep)
CLDFGBKD_00537 1.8e-41 M Putative peptidoglycan binding domain
CLDFGBKD_00538 3.9e-32 M Putative peptidoglycan binding domain
CLDFGBKD_00540 1.1e-81 macB V ATPases associated with a variety of cellular activities
CLDFGBKD_00541 3.1e-295 S Psort location Cytoplasmic, score 8.87
CLDFGBKD_00542 2.4e-113 S Domain of unknown function (DUF4194)
CLDFGBKD_00543 0.0 S Psort location Cytoplasmic, score 8.87
CLDFGBKD_00544 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
CLDFGBKD_00545 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
CLDFGBKD_00546 1.9e-186 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
CLDFGBKD_00547 1.4e-184 rapZ S Displays ATPase and GTPase activities
CLDFGBKD_00548 1.2e-169 whiA K May be required for sporulation
CLDFGBKD_00549 1.1e-220 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
CLDFGBKD_00550 1.6e-143 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
CLDFGBKD_00551 2.5e-34 secG U Preprotein translocase SecG subunit
CLDFGBKD_00552 1.1e-175 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
CLDFGBKD_00553 1.5e-160 S Sucrose-6F-phosphate phosphohydrolase
CLDFGBKD_00554 3.8e-247 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
CLDFGBKD_00555 1.1e-216 mepA_6 V MatE
CLDFGBKD_00556 4.1e-216 brnQ U Component of the transport system for branched-chain amino acids
CLDFGBKD_00557 5.7e-200 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CLDFGBKD_00558 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
CLDFGBKD_00559 6.7e-180 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
CLDFGBKD_00560 9.8e-211 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
CLDFGBKD_00561 8.4e-25 S Putative phage holin Dp-1
CLDFGBKD_00562 1.4e-71 M Glycosyl hydrolases family 25
CLDFGBKD_00563 6.4e-50
CLDFGBKD_00564 7.7e-19
CLDFGBKD_00565 1.1e-34 CP_0766 2.7.13.3 D nuclear chromosome segregation
CLDFGBKD_00566 1.1e-127
CLDFGBKD_00567 1.9e-52
CLDFGBKD_00568 4e-66
CLDFGBKD_00569 3.1e-204 S Phage-related minor tail protein
CLDFGBKD_00570 9.2e-36
CLDFGBKD_00571 3.9e-55
CLDFGBKD_00573 7.3e-84
CLDFGBKD_00574 3e-40
CLDFGBKD_00575 5.2e-34
CLDFGBKD_00576 4.2e-50
CLDFGBKD_00577 1.9e-15
CLDFGBKD_00579 3.2e-52 S Phage capsid family
CLDFGBKD_00581 4.8e-73
CLDFGBKD_00582 1.2e-96 S Phage portal protein, SPP1 Gp6-like
CLDFGBKD_00583 5e-269 S Terminase
CLDFGBKD_00584 4.5e-49
CLDFGBKD_00586 1.6e-13
CLDFGBKD_00587 3.1e-225 ilvE 2.6.1.42 E Amino-transferase class IV
CLDFGBKD_00588 1.2e-82 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CLDFGBKD_00589 9.8e-194 S alpha beta
CLDFGBKD_00590 4.6e-234 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
CLDFGBKD_00591 1e-42 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
CLDFGBKD_00592 5.5e-201 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
CLDFGBKD_00593 0.0 fadD 6.2.1.3 I AMP-binding enzyme
CLDFGBKD_00594 6.8e-182 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CLDFGBKD_00595 1.4e-254 corC S CBS domain
CLDFGBKD_00596 5.2e-101 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CLDFGBKD_00597 3.3e-214 phoH T PhoH-like protein
CLDFGBKD_00598 1.5e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
CLDFGBKD_00599 4.2e-144 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
CLDFGBKD_00601 1.4e-164 spoU 2.1.1.185 J SpoU rRNA Methylase family
CLDFGBKD_00602 1.4e-239 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CLDFGBKD_00603 1.6e-111 yitW S Iron-sulfur cluster assembly protein
CLDFGBKD_00604 1.5e-100 iscU C SUF system FeS assembly protein, NifU family
CLDFGBKD_00605 2.5e-239 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CLDFGBKD_00606 9.2e-144 sufC O FeS assembly ATPase SufC
CLDFGBKD_00607 7.3e-236 sufD O FeS assembly protein SufD
CLDFGBKD_00608 1.1e-291 sufB O FeS assembly protein SufB
CLDFGBKD_00609 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
CLDFGBKD_00610 7e-80 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
CLDFGBKD_00611 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CLDFGBKD_00612 3.8e-218 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CLDFGBKD_00613 2.6e-77 3.4.23.43 S Type IV leader peptidase family
CLDFGBKD_00614 6.1e-200 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CLDFGBKD_00615 5.1e-78 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CLDFGBKD_00616 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CLDFGBKD_00617 2.1e-35
CLDFGBKD_00618 2.6e-62 WQ51_05790 S Bacterial protein of unknown function (DUF948)
CLDFGBKD_00619 1.2e-128 pgm3 G Phosphoglycerate mutase family
CLDFGBKD_00620 1.2e-48 relB L RelB antitoxin
CLDFGBKD_00621 3e-65 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
CLDFGBKD_00622 1.6e-111 E Transglutaminase-like superfamily
CLDFGBKD_00623 3.8e-44 sdpI S SdpI/YhfL protein family
CLDFGBKD_00624 4e-80 3.5.4.5 F cytidine deaminase activity
CLDFGBKD_00625 1.4e-152 S Peptidase C26
CLDFGBKD_00626 4.5e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CLDFGBKD_00627 4.4e-135 lolD V ABC transporter
CLDFGBKD_00628 2.8e-216 V FtsX-like permease family
CLDFGBKD_00629 3.7e-64 S Domain of unknown function (DUF4418)
CLDFGBKD_00630 0.0 pcrA 3.6.4.12 L DNA helicase
CLDFGBKD_00631 4.8e-105 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
CLDFGBKD_00632 1.8e-240 pbuX F Permease family
CLDFGBKD_00633 2.4e-30 yozG K Cro/C1-type HTH DNA-binding domain
CLDFGBKD_00634 2.7e-166 M pfam nlp p60
CLDFGBKD_00635 1e-66 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CLDFGBKD_00636 1.6e-106 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
CLDFGBKD_00637 1.5e-109 3.4.13.21 E Peptidase family S51
CLDFGBKD_00638 1.9e-196
CLDFGBKD_00639 2.5e-49 E lipolytic protein G-D-S-L family
CLDFGBKD_00640 3.9e-29 E GDSL-like Lipase/Acylhydrolase family
CLDFGBKD_00641 1.8e-90 K Helix-turn-helix domain
CLDFGBKD_00642 2.7e-103 S PIN domain
CLDFGBKD_00643 1.1e-283 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
CLDFGBKD_00644 6.7e-249 V ABC-2 family transporter protein
CLDFGBKD_00645 1.7e-224 V ABC-2 family transporter protein
CLDFGBKD_00646 2.9e-187 V ATPases associated with a variety of cellular activities
CLDFGBKD_00647 1.2e-09 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
CLDFGBKD_00648 8.6e-214 T Histidine kinase
CLDFGBKD_00649 1.2e-101 K helix_turn_helix, Lux Regulon
CLDFGBKD_00650 2.1e-114 MA20_27875 P Protein of unknown function DUF47
CLDFGBKD_00651 3.1e-187 pit P Phosphate transporter family
CLDFGBKD_00652 9.9e-260 nplT G Alpha amylase, catalytic domain
CLDFGBKD_00653 2.1e-33 EGP Major Facilitator Superfamily
CLDFGBKD_00654 3.9e-29 EGP Major Facilitator Superfamily
CLDFGBKD_00655 0.0 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
CLDFGBKD_00656 0.0 S Glycosyl hydrolases related to GH101 family, GH129
CLDFGBKD_00657 1.1e-80
CLDFGBKD_00658 1.2e-241 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
CLDFGBKD_00659 7.1e-158 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
CLDFGBKD_00660 7.3e-155 S Sucrose-6F-phosphate phosphohydrolase
CLDFGBKD_00662 6.3e-49 L Transposase, Mutator family
CLDFGBKD_00663 4.3e-39 L Transposase, Mutator family
CLDFGBKD_00664 8.8e-93 bcp 1.11.1.15 O Redoxin
CLDFGBKD_00665 2.3e-129
CLDFGBKD_00666 2.9e-63 CP_1020 S zinc finger
CLDFGBKD_00667 2e-12 2.5.1.19 S Belongs to the short-chain dehydrogenases reductases (SDR) family
CLDFGBKD_00668 3.1e-31 mazG S MazG-like family
CLDFGBKD_00669 1.6e-206 L Uncharacterized conserved protein (DUF2075)
CLDFGBKD_00670 1.7e-30 S zinc finger
CLDFGBKD_00671 5.9e-36 rarD S EamA-like transporter family
CLDFGBKD_00672 2.3e-124 S Plasmid pRiA4b ORF-3-like protein
CLDFGBKD_00673 1.4e-177 CP_1020 S zinc ion binding
CLDFGBKD_00674 2.9e-168 I alpha/beta hydrolase fold
CLDFGBKD_00675 7.6e-12 ydhF S Aldo/keto reductase family
CLDFGBKD_00676 2.5e-23 ydhF S Aldo/keto reductase family
CLDFGBKD_00677 1.6e-109 S phosphoesterase or phosphohydrolase
CLDFGBKD_00678 1.1e-130 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CLDFGBKD_00680 1.3e-67 S Phospholipase/Carboxylesterase
CLDFGBKD_00681 2.7e-194 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
CLDFGBKD_00682 4.3e-95 sixA 3.6.1.55 T Phosphoglycerate mutase family
CLDFGBKD_00683 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CLDFGBKD_00684 7.4e-155 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
CLDFGBKD_00685 6.9e-186 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
CLDFGBKD_00686 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
CLDFGBKD_00687 5.9e-177 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
CLDFGBKD_00688 1e-72 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
CLDFGBKD_00689 6.9e-289 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
CLDFGBKD_00690 9.4e-175 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
CLDFGBKD_00691 4.5e-157 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
CLDFGBKD_00692 8.9e-181 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
CLDFGBKD_00693 1.6e-123 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CLDFGBKD_00694 5.1e-24
CLDFGBKD_00695 3.5e-205 MA20_36090 S Psort location Cytoplasmic, score 8.87
CLDFGBKD_00696 3e-170 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
CLDFGBKD_00697 3.3e-10 V ABC transporter transmembrane region
CLDFGBKD_00698 3.3e-120 3.8.1.2 S Haloacid dehalogenase-like hydrolase
CLDFGBKD_00699 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CLDFGBKD_00700 8.3e-229 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
CLDFGBKD_00701 2.9e-137 KL DEAD-like helicases superfamily
CLDFGBKD_00702 6.1e-45 yeaO K Protein of unknown function, DUF488
CLDFGBKD_00703 1.1e-11 IQ short chain dehydrogenase
CLDFGBKD_00704 3.5e-41 S Fic/DOC family
CLDFGBKD_00706 2.3e-16 yijF S Domain of unknown function (DUF1287)
CLDFGBKD_00707 6.5e-156 3.6.4.12
CLDFGBKD_00708 4.2e-19
CLDFGBKD_00709 1.2e-46
CLDFGBKD_00710 5.7e-64 yeaO K Protein of unknown function, DUF488
CLDFGBKD_00712 8.8e-287 mmuP E amino acid
CLDFGBKD_00713 1e-77 2.6.1.76 EGP Major Facilitator Superfamily
CLDFGBKD_00715 9.6e-94 yidC U Membrane protein insertase, YidC Oxa1 family
CLDFGBKD_00716 2.9e-116 XK27_07525 3.6.1.55 F Hydrolase of X-linked nucleoside diphosphate N terminal
CLDFGBKD_00717 1e-31 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
CLDFGBKD_00718 7.9e-109
CLDFGBKD_00719 5.5e-71 K Transcriptional regulator
CLDFGBKD_00720 5.3e-51
CLDFGBKD_00721 7.4e-49 S Protein of unknown function (DUF2089)
CLDFGBKD_00723 2.3e-162 V ABC transporter
CLDFGBKD_00724 9.2e-251 V Efflux ABC transporter, permease protein
CLDFGBKD_00725 2.8e-224 T Histidine kinase
CLDFGBKD_00726 2e-118 K Bacterial regulatory proteins, luxR family
CLDFGBKD_00727 2.2e-48 L Transposase and inactivated derivatives IS30 family
CLDFGBKD_00728 1.8e-98 cydD V ABC transporter transmembrane region
CLDFGBKD_00729 1.7e-124 cydD V ABC transporter transmembrane region
CLDFGBKD_00730 1.1e-247 araE EGP Major facilitator Superfamily
CLDFGBKD_00731 9.1e-101 2.7.13.3 T Histidine kinase
CLDFGBKD_00732 4.3e-41 K helix_turn_helix, Lux Regulon
CLDFGBKD_00733 2.2e-19 S Bacteriocin (Lactococcin_972)
CLDFGBKD_00734 1.3e-242 XK27_10205
CLDFGBKD_00735 4.7e-101 V ABC transporter
CLDFGBKD_00736 1.1e-26
CLDFGBKD_00737 2.3e-25 L Transposase
CLDFGBKD_00738 2.1e-19 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
CLDFGBKD_00739 5.6e-171 K helix_turn _helix lactose operon repressor
CLDFGBKD_00740 3e-80 ganB 3.2.1.89 G Glycosyl hydrolase family 53
CLDFGBKD_00741 7.9e-126 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
CLDFGBKD_00742 9.7e-135 L Protein of unknown function (DUF1524)
CLDFGBKD_00743 4.7e-204 mntH P H( )-stimulated, divalent metal cation uptake system
CLDFGBKD_00744 2.7e-259 EGP Major facilitator Superfamily
CLDFGBKD_00745 1.5e-13 S AAA ATPase domain
CLDFGBKD_00746 1.4e-106 S AAA ATPase domain
CLDFGBKD_00747 3e-173 S Psort location Cytoplasmic, score 7.50
CLDFGBKD_00748 2e-44 V efflux transmembrane transporter activity
CLDFGBKD_00749 3e-153 L Transposase and inactivated derivatives IS30 family
CLDFGBKD_00750 1.2e-89 L Phage integrase family
CLDFGBKD_00751 9.6e-22
CLDFGBKD_00752 2.2e-12 L Phage integrase family
CLDFGBKD_00754 1.2e-20
CLDFGBKD_00755 7.3e-78
CLDFGBKD_00756 3.8e-123
CLDFGBKD_00757 3.6e-20 S Protein of unknown function (DUF2599)
CLDFGBKD_00759 1.1e-247 L Phage integrase family
CLDFGBKD_00760 0.0 G Glycosyl hydrolase family 20, domain 2
CLDFGBKD_00761 3.5e-152 U Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00762 9.3e-141 U Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00763 9.1e-167 G Bacterial extracellular solute-binding protein
CLDFGBKD_00764 1.8e-95 K Bacterial regulatory proteins, luxR family
CLDFGBKD_00765 2.5e-196 T Histidine kinase
CLDFGBKD_00766 2.6e-40
CLDFGBKD_00767 6.1e-67
CLDFGBKD_00768 5.1e-225 V Efflux ABC transporter, permease protein
CLDFGBKD_00769 1.6e-138 V ABC transporter
CLDFGBKD_00770 2.4e-99 3.4.21.83 E Prolyl oligopeptidase family
CLDFGBKD_00772 3.4e-97 KLT Protein kinase domain
CLDFGBKD_00773 1.9e-74 K Bacterial regulatory proteins, luxR family
CLDFGBKD_00774 2.5e-51 T Histidine kinase
CLDFGBKD_00775 1.6e-77 V FtsX-like permease family
CLDFGBKD_00776 3.3e-79 V ABC transporter
CLDFGBKD_00777 2.2e-294 V ABC transporter transmembrane region
CLDFGBKD_00778 4.1e-69 S Transglutaminase-like superfamily
CLDFGBKD_00779 2.1e-34 E Asparagine synthase
CLDFGBKD_00780 2e-294 E Asparagine synthase
CLDFGBKD_00781 1.4e-17
CLDFGBKD_00782 2.5e-121 V ABC transporter
CLDFGBKD_00783 2.5e-124 K helix_turn_helix, Lux Regulon
CLDFGBKD_00784 3.1e-232 T Histidine kinase
CLDFGBKD_00785 3e-17 U Type IV secretory system Conjugative DNA transfer
CLDFGBKD_00788 8.3e-123 V ABC transporter
CLDFGBKD_00790 2e-157 yvgN 1.1.1.346 S Aldo/keto reductase family
CLDFGBKD_00791 1e-281 2.7.1.17 GH19 G FGGY family of carbohydrate kinases, N-terminal domain
CLDFGBKD_00792 1.4e-41 acyP 3.6.1.7 C Acylphosphatase
CLDFGBKD_00793 1.6e-255 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CLDFGBKD_00794 1.8e-220 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CLDFGBKD_00795 6e-111 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
CLDFGBKD_00796 5e-97
CLDFGBKD_00797 2e-120 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CLDFGBKD_00798 6.3e-131 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
CLDFGBKD_00799 1.5e-20 S Uncharacterized protein conserved in bacteria (DUF2252)
CLDFGBKD_00800 8.9e-264 glnA2 6.3.1.2 E glutamine synthetase
CLDFGBKD_00801 6.8e-186 EGP Major facilitator Superfamily
CLDFGBKD_00802 1.9e-132 appC EP Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00803 2.1e-177 EP Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00804 0.0 E Bacterial extracellular solute-binding proteins, family 5 Middle
CLDFGBKD_00805 5.1e-309 P Belongs to the ABC transporter superfamily
CLDFGBKD_00806 2.9e-171 M Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
CLDFGBKD_00807 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
CLDFGBKD_00808 4.9e-122 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
CLDFGBKD_00809 5.3e-273 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CLDFGBKD_00810 3e-176 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
CLDFGBKD_00811 6.7e-157 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CLDFGBKD_00812 1e-128 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CLDFGBKD_00813 1e-35 M Lysin motif
CLDFGBKD_00814 2.6e-49 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CLDFGBKD_00815 2.7e-227 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CLDFGBKD_00816 0.0 L DNA helicase
CLDFGBKD_00817 5.5e-92 mraZ K Belongs to the MraZ family
CLDFGBKD_00818 1.6e-194 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
CLDFGBKD_00819 3.7e-73 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
CLDFGBKD_00820 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
CLDFGBKD_00821 1.6e-152 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CLDFGBKD_00822 1.3e-247 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
CLDFGBKD_00823 8e-202 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CLDFGBKD_00824 2.1e-271 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CLDFGBKD_00825 6.3e-224 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
CLDFGBKD_00826 1.4e-220 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CLDFGBKD_00827 2.1e-285 murC 6.3.2.8 M Belongs to the MurCDEF family
CLDFGBKD_00828 2.3e-182 ftsQ 6.3.2.4 D Cell division protein FtsQ
CLDFGBKD_00829 4.1e-15
CLDFGBKD_00830 3.4e-43 tnp7109-21 L Integrase core domain
CLDFGBKD_00831 2.2e-109 V ATPases associated with a variety of cellular activities
CLDFGBKD_00832 1.2e-81 V ABC-2 family transporter protein
CLDFGBKD_00833 3.7e-76 L Transposase and inactivated derivatives IS30 family
CLDFGBKD_00834 3.9e-44 K Addiction module
CLDFGBKD_00835 1e-47
CLDFGBKD_00836 1.7e-87 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
CLDFGBKD_00837 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
CLDFGBKD_00838 4.4e-35 L PFAM Integrase catalytic
CLDFGBKD_00839 8.8e-234 S AAA domain
CLDFGBKD_00840 1.5e-308 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
CLDFGBKD_00841 3.8e-24 trxB1 1.8.1.9 C Thioredoxin domain
CLDFGBKD_00842 5.8e-191 oppA5 E family 5
CLDFGBKD_00843 1.9e-122 appB P PFAM binding-protein-dependent transport systems inner membrane component
CLDFGBKD_00844 2.5e-89 appC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLDFGBKD_00845 1.4e-153 P Belongs to the ABC transporter superfamily
CLDFGBKD_00846 5.6e-79 ybfG M Domain of unknown function (DUF1906)
CLDFGBKD_00848 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CLDFGBKD_00849 0.0 yjjP S Threonine/Serine exporter, ThrE
CLDFGBKD_00850 1.1e-300 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CLDFGBKD_00851 2.3e-184 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
CLDFGBKD_00852 1.7e-309 S Amidohydrolase family
CLDFGBKD_00853 1.2e-202 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
CLDFGBKD_00854 5.7e-38 S Protein of unknown function (DUF3073)
CLDFGBKD_00855 4.7e-106 K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
CLDFGBKD_00856 1.2e-208 2.7.13.3 T Histidine kinase
CLDFGBKD_00857 6.3e-236 EGP Major Facilitator Superfamily
CLDFGBKD_00858 7.5e-76 I Sterol carrier protein
CLDFGBKD_00859 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
CLDFGBKD_00860 1.7e-31
CLDFGBKD_00861 2.9e-125 gluP 3.4.21.105 S Rhomboid family
CLDFGBKD_00862 9.6e-80 crgA D Involved in cell division
CLDFGBKD_00863 2.9e-108 S Bacterial protein of unknown function (DUF881)
CLDFGBKD_00864 7.3e-236 srtA 3.4.22.70 M Sortase family
CLDFGBKD_00865 1.1e-118 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
CLDFGBKD_00866 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
CLDFGBKD_00867 1.3e-171 T Protein tyrosine kinase
CLDFGBKD_00868 2.9e-260 pbpA M penicillin-binding protein
CLDFGBKD_00869 2.7e-251 rodA D Belongs to the SEDS family
CLDFGBKD_00870 4.6e-241 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
CLDFGBKD_00871 8e-59 fhaB T Inner membrane component of T3SS, cytoplasmic domain
CLDFGBKD_00872 2.6e-129 fhaA T Protein of unknown function (DUF2662)
CLDFGBKD_00873 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
CLDFGBKD_00874 1.1e-206 pldB 3.1.1.5 I Serine aminopeptidase, S33
CLDFGBKD_00875 3.4e-148 yddG EG EamA-like transporter family
CLDFGBKD_00876 6.6e-230 S Putative esterase
CLDFGBKD_00877 0.0 lysX S Uncharacterised conserved protein (DUF2156)
CLDFGBKD_00878 4.5e-55 G Hypothetical glycosyl hydrolase 6
CLDFGBKD_00879 1e-202 L Phage integrase family
CLDFGBKD_00880 7e-71 pstIR 2.1.1.72, 3.1.21.4 L BsuBI/PstI restriction endonuclease C-terminus
CLDFGBKD_00881 8.5e-21 E Glyoxalase-like domain
CLDFGBKD_00882 9.5e-95 K Psort location Cytoplasmic, score 8.87
CLDFGBKD_00883 6.9e-17
CLDFGBKD_00884 4.6e-17 S Plasmid replication protein
CLDFGBKD_00885 9.1e-55 S Plasmid replication protein
CLDFGBKD_00886 5.9e-104 D ftsk spoiiie
CLDFGBKD_00887 1.1e-20
CLDFGBKD_00888 1.1e-09
CLDFGBKD_00889 8.6e-84
CLDFGBKD_00892 8.9e-12
CLDFGBKD_00893 8.5e-23 S Ribonuclease toxin, BrnT, of type II toxin-antitoxin system
CLDFGBKD_00894 4.2e-205 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CLDFGBKD_00895 1.7e-145 atpB C it plays a direct role in the translocation of protons across the membrane
CLDFGBKD_00896 1.5e-30 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CLDFGBKD_00897 2.7e-59 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CLDFGBKD_00898 1.2e-146 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CLDFGBKD_00899 3.7e-304 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CLDFGBKD_00900 4.1e-159 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CLDFGBKD_00901 1.5e-280 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CLDFGBKD_00902 1.6e-48 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
CLDFGBKD_00903 5e-134 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
CLDFGBKD_00904 9.2e-157 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
CLDFGBKD_00905 8.1e-183
CLDFGBKD_00906 1.2e-180
CLDFGBKD_00907 3.7e-166 trxA2 O Tetratricopeptide repeat
CLDFGBKD_00908 2.4e-118 cyaA 4.6.1.1 S CYTH
CLDFGBKD_00910 1e-63 psp1 3.5.99.10 J Endoribonuclease L-PSP
CLDFGBKD_00911 2.9e-179 plsC2 2.3.1.51 I Phosphate acyltransferases
CLDFGBKD_00912 3.2e-181 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
CLDFGBKD_00913 1.2e-227 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
CLDFGBKD_00914 1.2e-208 P Bacterial extracellular solute-binding protein
CLDFGBKD_00915 3.9e-157 U Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00916 3.2e-127 U Binding-protein-dependent transport system inner membrane component
CLDFGBKD_00917 1.9e-226 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
CLDFGBKD_00918 9.2e-176 S CAAX protease self-immunity
CLDFGBKD_00919 1.2e-127 M Mechanosensitive ion channel
CLDFGBKD_00920 2.3e-270 aspA 4.3.1.1 E Fumarase C C-terminus
CLDFGBKD_00921 4.8e-131 K Bacterial regulatory proteins, tetR family
CLDFGBKD_00922 2.1e-239 MA20_36090 S Psort location Cytoplasmic, score 8.87
CLDFGBKD_00923 2.2e-90 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CLDFGBKD_00924 5.8e-11 XK27_04590 S NADPH-dependent FMN reductase
CLDFGBKD_00929 3.5e-08 yxiO G Major facilitator Superfamily
CLDFGBKD_00930 9e-53 relB L RelB antitoxin
CLDFGBKD_00931 7.1e-21 T Toxic component of a toxin-antitoxin (TA) module
CLDFGBKD_00932 2.2e-131 K helix_turn_helix, mercury resistance
CLDFGBKD_00933 1e-232 yxiO S Vacuole effluxer Atg22 like
CLDFGBKD_00934 1.2e-196 yegV G pfkB family carbohydrate kinase
CLDFGBKD_00935 5.5e-29 rpmB J Ribosomal L28 family
CLDFGBKD_00936 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
CLDFGBKD_00937 2.7e-70 K Bacterial regulatory proteins, lacI family
CLDFGBKD_00938 6.1e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
CLDFGBKD_00939 1e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CLDFGBKD_00940 1.6e-112 nusG K Participates in transcription elongation, termination and antitermination
CLDFGBKD_00941 1.2e-32 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
CLDFGBKD_00943 2.9e-229 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
CLDFGBKD_00944 3.9e-204 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CLDFGBKD_00945 5e-304 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CLDFGBKD_00946 8.8e-40 rpmA J Ribosomal L27 protein
CLDFGBKD_00947 2.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
CLDFGBKD_00948 0.0 rne 3.1.26.12 J Ribonuclease E/G family
CLDFGBKD_00949 2e-228 dapE 3.5.1.18 E Peptidase dimerisation domain
CLDFGBKD_00950 5.5e-167 mdcF S Transporter, auxin efflux carrier (AEC) family protein
CLDFGBKD_00951 9.4e-77 fucU 5.1.3.29 G RbsD / FucU transport protein family
CLDFGBKD_00952 5.1e-147 S Amidohydrolase
CLDFGBKD_00953 1.4e-202 fucP G Major Facilitator Superfamily
CLDFGBKD_00954 5.6e-141 IQ KR domain
CLDFGBKD_00955 1.4e-245 4.2.1.68 M Enolase C-terminal domain-like
CLDFGBKD_00956 1.5e-181 K Bacterial regulatory proteins, lacI family
CLDFGBKD_00957 9e-254 V Efflux ABC transporter, permease protein
CLDFGBKD_00958 1.7e-133 V ATPases associated with a variety of cellular activities
CLDFGBKD_00960 2.2e-16 S Protein of unknown function (DUF1778)
CLDFGBKD_00961 6.9e-278 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
CLDFGBKD_00962 1.2e-205 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
CLDFGBKD_00963 1.4e-232 hom 1.1.1.3 E Homoserine dehydrogenase
CLDFGBKD_00964 3.2e-292 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
CLDFGBKD_00965 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
CLDFGBKD_00966 4.3e-172 K LysR substrate binding domain protein
CLDFGBKD_00967 5.1e-245 patB 4.4.1.8 E Aminotransferase, class I II
CLDFGBKD_00968 4.1e-253 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CLDFGBKD_00969 1.2e-252 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
CLDFGBKD_00970 4.1e-206 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
CLDFGBKD_00971 3.5e-131 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CLDFGBKD_00972 4.8e-268 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CLDFGBKD_00973 1.6e-138 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
CLDFGBKD_00974 9.7e-244 S Calcineurin-like phosphoesterase
CLDFGBKD_00975 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CLDFGBKD_00976 1.4e-212 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
CLDFGBKD_00977 8.8e-129
CLDFGBKD_00978 3.4e-259 lacS G Psort location CytoplasmicMembrane, score 10.00
CLDFGBKD_00979 1e-271 lacS G Psort location CytoplasmicMembrane, score 10.00
CLDFGBKD_00990 0.0 V Type II restriction enzyme, methylase subunits
CLDFGBKD_00991 3.1e-09 S Domain of unknown function (DUF3841)
CLDFGBKD_00994 1.4e-09 6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.5.5 HJ ligase activity
CLDFGBKD_00995 2.4e-102
CLDFGBKD_00999 5.3e-146 L Psort location Cytoplasmic, score 8.87
CLDFGBKD_01010 5e-130 L Psort location Cytoplasmic, score 8.87
CLDFGBKD_01011 1.6e-64 L Transposase IS200 like
CLDFGBKD_01015 7.5e-119 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
CLDFGBKD_01018 4.2e-26 yorS 3.1.3.5 S 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
CLDFGBKD_01021 1.4e-12
CLDFGBKD_01022 6.7e-71
CLDFGBKD_01032 4.9e-30 3.1.1.53 L Calcineurin-like phosphoesterase
CLDFGBKD_01035 6.2e-24
CLDFGBKD_01042 1.2e-61 M Sortase family
CLDFGBKD_01054 1.2e-16 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
CLDFGBKD_01060 3.2e-18 secG U Preprotein translocase SecG subunit
CLDFGBKD_01062 7.8e-13 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
CLDFGBKD_01083 6.2e-75 S Psort location Cytoplasmic, score 8.87
CLDFGBKD_01084 0.0 K RNA polymerase II activating transcription factor binding
CLDFGBKD_01085 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
CLDFGBKD_01086 2.8e-90 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CLDFGBKD_01087 1.6e-97 mntP P Probably functions as a manganese efflux pump
CLDFGBKD_01088 4e-82
CLDFGBKD_01089 3.7e-132 KT Transcriptional regulatory protein, C terminal
CLDFGBKD_01090 2.5e-129 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CLDFGBKD_01091 3.8e-279 E Bacterial extracellular solute-binding proteins, family 5 Middle
CLDFGBKD_01092 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
CLDFGBKD_01093 6e-296 S domain protein
CLDFGBKD_01094 2e-62 tyrA 5.4.99.5 E Chorismate mutase type II
CLDFGBKD_01095 4.9e-47 insK L Integrase core domain
CLDFGBKD_01096 1.8e-156 L Phage integrase, N-terminal SAM-like domain
CLDFGBKD_01097 7.2e-168 tnp7109-2 L PFAM Transposase, Mutator family
CLDFGBKD_01098 2.1e-61 L Transposase
CLDFGBKD_01099 0.0 uidA G Belongs to the glycosyl hydrolase 2 family
CLDFGBKD_01100 1.5e-245 gutA G Psort location CytoplasmicMembrane, score 10.00
CLDFGBKD_01101 3.1e-201 K helix_turn _helix lactose operon repressor
CLDFGBKD_01102 8.4e-245 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CLDFGBKD_01103 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
CLDFGBKD_01104 3.2e-283 S Histidine phosphatase superfamily (branch 2)
CLDFGBKD_01105 3.3e-52 S Protein of unknown function (DUF2469)
CLDFGBKD_01106 2e-197 2.3.1.57 J Acetyltransferase (GNAT) domain
CLDFGBKD_01107 1.2e-285 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CLDFGBKD_01108 8.6e-287 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
CLDFGBKD_01109 2e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CLDFGBKD_01110 3.5e-185 K Psort location Cytoplasmic, score
CLDFGBKD_01111 1.4e-158 spoU 2.1.1.185 J RNA methyltransferase TrmH family
CLDFGBKD_01112 4.7e-98 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CLDFGBKD_01113 9.4e-187 rmuC S RmuC family
CLDFGBKD_01114 1.6e-42 csoR S Metal-sensitive transcriptional repressor
CLDFGBKD_01115 0.0 pacS 1.9.3.1, 3.6.3.54 P E1-E2 ATPase
CLDFGBKD_01116 4e-125 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
CLDFGBKD_01118 6.5e-309 E ABC transporter, substrate-binding protein, family 5
CLDFGBKD_01119 1.7e-303 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
CLDFGBKD_01120 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
CLDFGBKD_01121 4.5e-178 K helix_turn _helix lactose operon repressor
CLDFGBKD_01124 7.4e-134 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
CLDFGBKD_01125 2.7e-179 hemN H Involved in the biosynthesis of porphyrin-containing compound
CLDFGBKD_01126 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
CLDFGBKD_01127 7.5e-34 rpsT J Binds directly to 16S ribosomal RNA
CLDFGBKD_01128 1.7e-126 S UPF0126 domain
CLDFGBKD_01129 5e-109 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
CLDFGBKD_01130 5e-108 int L Phage integrase family
CLDFGBKD_01131 4.6e-52 gepA S Protein of unknown function (DUF4065)
CLDFGBKD_01132 9.5e-17
CLDFGBKD_01135 4.1e-22
CLDFGBKD_01136 1.4e-17
CLDFGBKD_01141 1.6e-07 K BRO family, N-terminal domain
CLDFGBKD_01144 2.2e-66 L PDDEXK-like domain of unknown function (DUF3799)
CLDFGBKD_01148 1.8e-10 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
CLDFGBKD_01149 4e-30 V HNH endonuclease
CLDFGBKD_01152 2.1e-38
CLDFGBKD_01154 5.6e-11
CLDFGBKD_01157 2.2e-45
CLDFGBKD_01166 5.3e-23
CLDFGBKD_01171 5.1e-42
CLDFGBKD_01172 1.6e-24
CLDFGBKD_01173 3e-37
CLDFGBKD_01174 1.8e-19 K BRO family, N-terminal domain
CLDFGBKD_01175 2.5e-92 2.1.1.37 L C-5 cytosine-specific DNA methylase
CLDFGBKD_01177 4e-31 2.1.1.37 L DNA (cytosine-5-)-methyltransferase activity
CLDFGBKD_01178 2.3e-78 K BRO family, N-terminal domain
CLDFGBKD_01181 3.1e-10 L Belongs to the 'phage' integrase family
CLDFGBKD_01185 2e-23 comM O Magnesium chelatase, subunit ChlI C-terminal
CLDFGBKD_01188 2.4e-49 T Toxic component of a toxin-antitoxin (TA) module
CLDFGBKD_01189 5.7e-35 relB L RelB antitoxin
CLDFGBKD_01195 2.1e-52 ycgR S Predicted permease
CLDFGBKD_01196 5.5e-23 adcA P ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
CLDFGBKD_01197 2.6e-19 J Ribosomal L32p protein family
CLDFGBKD_01198 1.1e-14 rpmJ J Ribosomal protein L36
CLDFGBKD_01199 4.4e-34 rpmE2 J Ribosomal protein L31
CLDFGBKD_01200 2.5e-44 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CLDFGBKD_01201 1.4e-20 rpmG J Ribosomal protein L33
CLDFGBKD_01202 3.9e-29 rpmB J Ribosomal L28 family
CLDFGBKD_01203 1.4e-99 S cobalamin synthesis protein
CLDFGBKD_01204 2.5e-148 P Zinc-uptake complex component A periplasmic
CLDFGBKD_01205 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
CLDFGBKD_01206 4.2e-271 aldH 1.2.1.3, 1.2.1.5 C Aldehyde dehydrogenase family
CLDFGBKD_01207 8e-230 purD 6.3.4.13 F Belongs to the GARS family
CLDFGBKD_01208 1.2e-183 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
CLDFGBKD_01209 1.8e-289 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CLDFGBKD_01210 4.9e-121 glnQ 3.6.3.21 E AAA domain, putative AbiEii toxin, Type IV TA system
CLDFGBKD_01211 3.2e-122 E Binding-protein-dependent transport system inner membrane component
CLDFGBKD_01212 2.3e-127 ET Bacterial periplasmic substrate-binding proteins
CLDFGBKD_01213 3e-65 MA20_39615 S Cupin superfamily (DUF985)
CLDFGBKD_01214 2.1e-239 ssnA 3.5.4.40 F Amidohydrolase family
CLDFGBKD_01215 1.7e-191 3.3.1.1 H S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CLDFGBKD_01216 4.9e-272 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
CLDFGBKD_01217 2.3e-31
CLDFGBKD_01218 5.8e-47 C Aldo/keto reductase family
CLDFGBKD_01219 5.4e-10 C Aldo/keto reductase family
CLDFGBKD_01220 3.2e-169 hipA 2.7.11.1 S HipA N-terminal domain
CLDFGBKD_01221 1.3e-99 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
CLDFGBKD_01222 3.4e-107 Q D-alanine [D-alanyl carrier protein] ligase activity
CLDFGBKD_01223 3.5e-255 Q D-alanine [D-alanyl carrier protein] ligase activity
CLDFGBKD_01224 3.5e-157 I alpha/beta hydrolase fold
CLDFGBKD_01225 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
CLDFGBKD_01226 4.3e-138 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
CLDFGBKD_01227 1.6e-61 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CLDFGBKD_01228 1.6e-223 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
CLDFGBKD_01229 2.2e-189 mtnE 2.6.1.83 E Aminotransferase class I and II
CLDFGBKD_01230 9.3e-209 M Glycosyl transferase 4-like domain
CLDFGBKD_01231 1.1e-189 ltaE 4.1.2.48 E Beta-eliminating lyase
CLDFGBKD_01233 2.8e-180 yocS S SBF-like CPA transporter family (DUF4137)
CLDFGBKD_01234 3.2e-16 S ABC-2 family transporter protein
CLDFGBKD_01235 3.1e-51 V AAA domain, putative AbiEii toxin, Type IV TA system
CLDFGBKD_01236 3.7e-82 rpsI J Belongs to the universal ribosomal protein uS9 family
CLDFGBKD_01237 3.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CLDFGBKD_01238 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
CLDFGBKD_01239 1.1e-106
CLDFGBKD_01240 2.1e-109 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
CLDFGBKD_01241 1.5e-186 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CLDFGBKD_01244 9.6e-232 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CLDFGBKD_01245 1.7e-213 dapC E Aminotransferase class I and II
CLDFGBKD_01246 1.7e-59 fdxA C 4Fe-4S binding domain
CLDFGBKD_01247 4.4e-267 E aromatic amino acid transport protein AroP K03293
CLDFGBKD_01248 3e-218 murB 1.3.1.98 M Cell wall formation
CLDFGBKD_01249 4.1e-25 rpmG J Ribosomal protein L33
CLDFGBKD_01253 1.5e-40 megL 2.5.1.48, 4.4.1.1, 4.4.1.11, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
CLDFGBKD_01254 6.7e-47 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CLDFGBKD_01255 8.9e-177
CLDFGBKD_01256 6.7e-127 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
CLDFGBKD_01257 1.5e-119 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
CLDFGBKD_01258 2.8e-30 fmdB S Putative regulatory protein
CLDFGBKD_01259 1.6e-93 flgA NO SAF
CLDFGBKD_01260 6e-31
CLDFGBKD_01261 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
CLDFGBKD_01262 8.3e-188 T Forkhead associated domain
CLDFGBKD_01263 1.1e-33 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
CLDFGBKD_01264 3.1e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CLDFGBKD_01265 8.9e-137 3.2.1.8 S alpha beta
CLDFGBKD_01266 3.9e-246 pbuO S Permease family
CLDFGBKD_01268 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
CLDFGBKD_01269 1e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CLDFGBKD_01270 7.4e-169 lanT 3.6.3.27 V ABC transporter
CLDFGBKD_01271 1.2e-154 cbiO V ATPases associated with a variety of cellular activities
CLDFGBKD_01274 4.7e-27 2.7.13.3 T Histidine kinase
CLDFGBKD_01275 3.3e-52 K helix_turn_helix, Lux Regulon
CLDFGBKD_01276 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CLDFGBKD_01277 0.0 S Tetratricopeptide repeat
CLDFGBKD_01278 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CLDFGBKD_01279 7.2e-139 bioM P ATPases associated with a variety of cellular activities
CLDFGBKD_01280 1.9e-231 E Aminotransferase class I and II
CLDFGBKD_01281 3.6e-140 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
CLDFGBKD_01282 3.4e-199 S Glycosyltransferase, group 2 family protein
CLDFGBKD_01283 1.9e-102 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CLDFGBKD_01284 0.0 ecfA GP ABC transporter, ATP-binding protein
CLDFGBKD_01285 7.7e-46 yhbY J CRS1_YhbY
CLDFGBKD_01286 8.3e-55 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
CLDFGBKD_01287 1.1e-63 J TM2 domain
CLDFGBKD_01288 1.8e-184 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CLDFGBKD_01289 2e-248 EGP Major facilitator Superfamily
CLDFGBKD_01290 6.7e-246 rarA L Recombination factor protein RarA
CLDFGBKD_01291 0.0 L DEAD DEAH box helicase
CLDFGBKD_01292 1.4e-179 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
CLDFGBKD_01293 1.4e-281 phoN I PAP2 superfamily
CLDFGBKD_01294 7.5e-184 gluD E Binding-protein-dependent transport system inner membrane component
CLDFGBKD_01295 1.7e-106 gluC E Binding-protein-dependent transport system inner membrane component
CLDFGBKD_01296 4.4e-152 gluB ET Belongs to the bacterial solute-binding protein 3 family
CLDFGBKD_01297 1e-140 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
CLDFGBKD_01298 1.3e-21 2.7.13.3 T Histidine kinase
CLDFGBKD_01299 7.9e-182 gmk 1.1.1.23, 2.7.4.8 S Protein of unknown function (DUF559)
CLDFGBKD_01300 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CLDFGBKD_01301 3e-262 hisS 6.1.1.21 J Histidyl-tRNA synthetase
CLDFGBKD_01302 9.6e-208 purL 1.17.4.1, 6.3.5.3 L intein-mediated protein splicing
CLDFGBKD_01306 1.4e-27 flgJ S pathogenesis
CLDFGBKD_01308 1.5e-28 ydhQ 2.7.11.1 MU cell adhesion
CLDFGBKD_01309 9.1e-25 dnaN 2.7.7.7 L DNA-directed DNA polymerase activity
CLDFGBKD_01310 9.2e-163 S COG0433 Predicted ATPase
CLDFGBKD_01311 3.1e-50
CLDFGBKD_01313 1.5e-40 D protein tyrosine kinase activity
CLDFGBKD_01316 7.5e-71 addB 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
CLDFGBKD_01317 9.8e-14
CLDFGBKD_01319 2.9e-183 D ftsk spoiiie
CLDFGBKD_01320 2.1e-52 D nuclear chromosome segregation
CLDFGBKD_01321 1.7e-09 S Antitoxin component of a toxin-antitoxin (TA) module
CLDFGBKD_01322 1.6e-249 U Spy0128-like isopeptide containing domain
CLDFGBKD_01325 1.3e-58 S Bifunctional DNA primase/polymerase, N-terminal
CLDFGBKD_01326 1.5e-36 mutF V ABC transporter ATP-binding
CLDFGBKD_01327 1.3e-62 S ABC-2 family transporter protein
CLDFGBKD_01328 5.6e-58 spaG S Lantibiotic protection ABC transporter permease subunit, MutG family
CLDFGBKD_01329 3.9e-89
CLDFGBKD_01330 1.7e-98 T Transcriptional regulatory protein, C terminal
CLDFGBKD_01331 1.7e-118 T PhoQ Sensor
CLDFGBKD_01332 4.3e-88
CLDFGBKD_01333 1.7e-160 EG EamA-like transporter family
CLDFGBKD_01334 2.7e-70 pdxH S Pfam:Pyridox_oxidase
CLDFGBKD_01335 4.6e-241 L ribosomal rna small subunit methyltransferase
CLDFGBKD_01336 3.6e-162 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
CLDFGBKD_01337 6.3e-171 corA P CorA-like Mg2+ transporter protein
CLDFGBKD_01338 3.2e-150 ET Bacterial periplasmic substrate-binding proteins
CLDFGBKD_01339 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
CLDFGBKD_01340 7e-58 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
CLDFGBKD_01341 3.8e-246 comE S Competence protein
CLDFGBKD_01342 1.7e-176 holA 2.7.7.7 L DNA polymerase III delta subunit
CLDFGBKD_01343 4.8e-102 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
CLDFGBKD_01344 3.4e-149 yeaZ 2.3.1.234 O Glycoprotease family
CLDFGBKD_01345 1.9e-96 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
CLDFGBKD_01346 2.2e-193 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CLDFGBKD_01348 2.4e-119
CLDFGBKD_01350 1.9e-157 S Putative amidase domain
CLDFGBKD_01351 1.9e-139 L Transposase and inactivated derivatives IS30 family
CLDFGBKD_01352 5.6e-167 K Transposase IS116 IS110 IS902
CLDFGBKD_01353 1.3e-21 sdpI S SdpI/YhfL protein family
CLDFGBKD_01355 8.6e-28 S radical SAM domain protein
CLDFGBKD_01356 8.3e-45 2.1.1.255 AJ Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
CLDFGBKD_01357 1.4e-99 spaT V ATPases associated with a variety of cellular activities
CLDFGBKD_01358 3.2e-80 alfA 3.2.1.51 GH29 G Alpha-L-fucosidase
CLDFGBKD_01359 5.7e-22 alfA 3.2.1.51 GH29 G Alpha-L-fucosidase
CLDFGBKD_01360 1.6e-94 uhpT EGP Major facilitator Superfamily
CLDFGBKD_01361 9.7e-201 EGP Major Facilitator Superfamily
CLDFGBKD_01362 1.1e-201 2.7.13.3 T Histidine kinase
CLDFGBKD_01363 6.2e-107 K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
CLDFGBKD_01364 1.7e-75 V ATPases associated with a variety of cellular activities
CLDFGBKD_01365 3.8e-134 sagI S ABC-2 type transporter
CLDFGBKD_01366 4e-130 V ABC transporter
CLDFGBKD_01367 3.8e-117
CLDFGBKD_01368 4.1e-39 L Transposase
CLDFGBKD_01370 8.6e-70 rplI J Binds to the 23S rRNA
CLDFGBKD_01371 2.6e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CLDFGBKD_01372 9.7e-70 ssb1 L Single-stranded DNA-binding protein
CLDFGBKD_01373 4.6e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
CLDFGBKD_01374 7.6e-191 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CLDFGBKD_01375 1e-132 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CLDFGBKD_01376 0.0 ubiB S ABC1 family
CLDFGBKD_01377 1e-31 S granule-associated protein
CLDFGBKD_01378 8.3e-142 cobQ S CobB/CobQ-like glutamine amidotransferase domain
CLDFGBKD_01379 5.1e-260 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
CLDFGBKD_01380 2.1e-277 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
CLDFGBKD_01381 2.1e-250 dinF V MatE
CLDFGBKD_01382 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
CLDFGBKD_01383 1e-54 glnB K Nitrogen regulatory protein P-II
CLDFGBKD_01384 3.4e-228 amt U Ammonium Transporter Family
CLDFGBKD_01385 2.1e-169 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
CLDFGBKD_01386 1e-16
CLDFGBKD_01387 2.8e-45 S Protein of unknown function (DUF2089)
CLDFGBKD_01388 2.4e-122 icaR K Bacterial regulatory proteins, tetR family
CLDFGBKD_01389 3.4e-186 XK27_01805 M Glycosyltransferase like family 2
CLDFGBKD_01390 7e-260 pepD E Peptidase family C69
CLDFGBKD_01391 5.2e-12
CLDFGBKD_01392 2.9e-60 K Virulence activator alpha C-term
CLDFGBKD_01393 7.7e-263 V FtsX-like permease family
CLDFGBKD_01394 1.1e-94 V ATPases associated with a variety of cellular activities
CLDFGBKD_01395 4.7e-50
CLDFGBKD_01396 8.5e-08 L Transposase, Mutator family
CLDFGBKD_01398 1.5e-206 EGP Major facilitator Superfamily
CLDFGBKD_01399 1.4e-24 L Transposase, Mutator family
CLDFGBKD_01401 0.0 yjjK S ATP-binding cassette protein, ChvD family
CLDFGBKD_01402 3.3e-169 tesB I Thioesterase-like superfamily
CLDFGBKD_01403 9.4e-92 S Protein of unknown function (DUF3180)
CLDFGBKD_01404 2.4e-267 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CLDFGBKD_01405 4.8e-157 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CLDFGBKD_01406 5.1e-98 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
CLDFGBKD_01407 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CLDFGBKD_01408 1.2e-95 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
CLDFGBKD_01409 2.5e-214 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
CLDFGBKD_01410 1.2e-256 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
CLDFGBKD_01411 2.5e-300
CLDFGBKD_01412 6.1e-147 natA V ATPases associated with a variety of cellular activities
CLDFGBKD_01413 1.1e-231 epsG M Glycosyl transferase family 21
CLDFGBKD_01414 5.3e-266 S AI-2E family transporter
CLDFGBKD_01415 1e-178 3.4.14.13 M Glycosyltransferase like family 2
CLDFGBKD_01416 2.1e-200 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
CLDFGBKD_01417 4.2e-258 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
CLDFGBKD_01418 2.6e-12 L Integrase core domain
CLDFGBKD_01420 2.5e-218 S Psort location Cytoplasmic, score
CLDFGBKD_01421 5.2e-150 E Transglutaminase/protease-like homologues
CLDFGBKD_01422 0.0 gcs2 S A circularly permuted ATPgrasp
CLDFGBKD_01423 1.4e-167 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
CLDFGBKD_01424 7.7e-62 rplQ J Ribosomal protein L17
CLDFGBKD_01425 2e-183 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CLDFGBKD_01426 1.5e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CLDFGBKD_01427 4.7e-61 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CLDFGBKD_01428 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
CLDFGBKD_01429 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CLDFGBKD_01430 6.5e-99 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
CLDFGBKD_01431 7.6e-247 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
CLDFGBKD_01432 1.1e-75 rplO J binds to the 23S rRNA
CLDFGBKD_01433 9.2e-26 rpmD J Ribosomal protein L30p/L7e
CLDFGBKD_01434 1.5e-95 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CLDFGBKD_01435 2.1e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CLDFGBKD_01436 1.6e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CLDFGBKD_01437 5.5e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CLDFGBKD_01438 9.2e-18 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CLDFGBKD_01439 4.4e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CLDFGBKD_01440 1.8e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CLDFGBKD_01441 6.6e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CLDFGBKD_01442 6.4e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CLDFGBKD_01443 4.1e-37 rpmC J Belongs to the universal ribosomal protein uL29 family
CLDFGBKD_01444 1.7e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CLDFGBKD_01445 5.2e-102 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CLDFGBKD_01446 4.3e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CLDFGBKD_01447 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CLDFGBKD_01448 8e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CLDFGBKD_01449 3.4e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
CLDFGBKD_01450 1.2e-115 rplD J Forms part of the polypeptide exit tunnel
CLDFGBKD_01451 4.3e-115 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CLDFGBKD_01452 4e-50 rpsJ J Involved in the binding of tRNA to the ribosomes
CLDFGBKD_01453 1.5e-143 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
CLDFGBKD_01454 2.2e-38 ywiC S YwiC-like protein
CLDFGBKD_01455 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
CLDFGBKD_01456 2.6e-222 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
CLDFGBKD_01457 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
CLDFGBKD_01458 4.6e-51 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CLDFGBKD_01459 1.5e-58 bioY S BioY family
CLDFGBKD_01460 1.5e-71 cbiO P ATPases associated with a variety of cellular activities
CLDFGBKD_01461 1.8e-51 bioN P Cobalt transport protein
CLDFGBKD_01462 3.4e-202 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CLDFGBKD_01463 5.5e-253 yhjE EGP Sugar (and other) transporter
CLDFGBKD_01464 5.4e-271 scrT G Transporter major facilitator family protein
CLDFGBKD_01465 1.3e-298 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
CLDFGBKD_01466 2.1e-202 K helix_turn _helix lactose operon repressor
CLDFGBKD_01467 3.8e-53 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CLDFGBKD_01468 8.3e-116 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CLDFGBKD_01469 7.7e-280 clcA P Voltage gated chloride channel
CLDFGBKD_01470 2e-252 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CLDFGBKD_01472 3.3e-11 S AAA ATPase domain
CLDFGBKD_01473 1.4e-206 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
CLDFGBKD_01474 8.4e-119 mug 3.2.2.28, 6.3.3.2 L Uracil DNA glycosylase superfamily
CLDFGBKD_01475 4.8e-205 EGP Major Facilitator Superfamily
CLDFGBKD_01477 1.8e-157 htpX O Belongs to the peptidase M48B family
CLDFGBKD_01478 5.2e-266 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
CLDFGBKD_01479 1.8e-92 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
CLDFGBKD_01480 3.2e-99 ureG KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
CLDFGBKD_01481 6.8e-81 ureF J Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
CLDFGBKD_01482 5.5e-86 ureE O Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
CLDFGBKD_01483 1.7e-304 ureC 3.5.1.5 E Urease alpha-subunit, N-terminal domain
CLDFGBKD_01484 3.2e-95 ureB 3.5.1.5 E Urease, gamma subunit
CLDFGBKD_01485 3.9e-110 hoxN S rRNA processing
CLDFGBKD_01486 8.2e-99 urtE E ABC transporter
CLDFGBKD_01487 1.7e-112 urtD S Branched-chain amino acid ATP-binding cassette transporter
CLDFGBKD_01488 2.6e-160 urtC U Branched-chain amino acid transport system / permease component
CLDFGBKD_01489 2.5e-129 urtB U Branched-chain amino acid transport system / permease component
CLDFGBKD_01491 8.6e-195 urtA E Receptor family ligand binding region
CLDFGBKD_01492 0.0 cadA P E1-E2 ATPase
CLDFGBKD_01493 3.1e-247 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
CLDFGBKD_01494 1.2e-257 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
CLDFGBKD_01496 1e-25 L Transposase DDE domain
CLDFGBKD_01499 4.4e-32 T Toxic component of a toxin-antitoxin (TA) module
CLDFGBKD_01501 3.8e-60 yoaZ S PfpI family
CLDFGBKD_01502 5.1e-64 hsp20 O Hsp20/alpha crystallin family
CLDFGBKD_01503 4.5e-128 yplQ S Haemolysin-III related
CLDFGBKD_01504 6.6e-51 ybjQ S Putative heavy-metal-binding
CLDFGBKD_01505 4.4e-166 dcm 2.1.1.37 L Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
CLDFGBKD_01506 3.3e-119 S Domain of unknown function (DUF4928)
CLDFGBKD_01507 3e-110 S Pyridoxamine 5'-phosphate oxidase
CLDFGBKD_01508 2.1e-190 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CLDFGBKD_01509 1.8e-67 K Periplasmic binding proteins and sugar binding domain of LacI family
CLDFGBKD_01510 6.7e-62 K Periplasmic binding proteins and sugar binding domain of LacI family
CLDFGBKD_01511 1.2e-47 G MFS/sugar transport protein
CLDFGBKD_01512 1.1e-16 G MFS/sugar transport protein
CLDFGBKD_01513 3.7e-22 G MFS/sugar transport protein
CLDFGBKD_01514 2.8e-19 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CLDFGBKD_01515 1.9e-166 uxuT G MFS/sugar transport protein
CLDFGBKD_01516 9.1e-12 L Helix-turn-helix domain
CLDFGBKD_01517 1.1e-57 L PFAM Integrase catalytic
CLDFGBKD_01518 2e-46 L Transposase, Mutator family
CLDFGBKD_01519 7.7e-157 I type I phosphodiesterase nucleotide pyrophosphatase
CLDFGBKD_01520 7.9e-197 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
CLDFGBKD_01521 1.8e-154 U Binding-protein-dependent transport system inner membrane component
CLDFGBKD_01522 5.4e-51 U Binding-protein-dependent transport system inner membrane component
CLDFGBKD_01523 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CLDFGBKD_01524 3.3e-241 malY 4.4.1.8 E Aminotransferase, class I II
CLDFGBKD_01525 3e-160 nanL 4.3.3.7 EM Dihydrodipicolinate synthetase family
CLDFGBKD_01526 8.5e-143 oppF E ATPases associated with a variety of cellular activities
CLDFGBKD_01527 0.0 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
CLDFGBKD_01528 7.2e-167 oppB6 EP Binding-protein-dependent transport system inner membrane component
CLDFGBKD_01529 2.3e-271 E Bacterial extracellular solute-binding proteins, family 5 Middle
CLDFGBKD_01530 0.0 nanI 3.2.1.18 GH33 G BNR repeat-like domain
CLDFGBKD_01531 6e-115 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
CLDFGBKD_01532 2.9e-120 2.7.1.2 GK ROK family
CLDFGBKD_01533 9.1e-143 L Domain of unknown function (DUF4862)
CLDFGBKD_01534 6e-108 K FCD
CLDFGBKD_01535 4.9e-174 lacR K Transcriptional regulator, LacI family
CLDFGBKD_01536 1.4e-166 S Type I restriction enzyme R protein N terminus (HSDR_N)
CLDFGBKD_01537 1.8e-28 S IrrE N-terminal-like domain
CLDFGBKD_01538 6.8e-16
CLDFGBKD_01539 2.5e-21
CLDFGBKD_01546 1.9e-48 ssb1 L Single-stranded DNA-binding protein
CLDFGBKD_01547 3.8e-87 K ParB-like nuclease domain
CLDFGBKD_01549 4e-42 K Transcriptional regulator
CLDFGBKD_01550 2.7e-18
CLDFGBKD_01551 1.4e-32 A 3'-to-5' exoribonuclease specific for small oligoribonucleotides
CLDFGBKD_01552 1.1e-49 V HNH endonuclease
CLDFGBKD_01561 2.8e-10
CLDFGBKD_01566 7.3e-85
CLDFGBKD_01571 2.9e-28 L HNH endonuclease
CLDFGBKD_01572 4.4e-28
CLDFGBKD_01573 1.4e-182 S Terminase
CLDFGBKD_01574 5.4e-177 S Phage portal protein, SPP1 Gp6-like
CLDFGBKD_01575 3.2e-60
CLDFGBKD_01577 3e-33
CLDFGBKD_01578 2.1e-163 S Phage capsid family
CLDFGBKD_01579 1.2e-57
CLDFGBKD_01580 2.4e-42 S Phage protein Gp19/Gp15/Gp42
CLDFGBKD_01581 3.7e-44
CLDFGBKD_01582 1e-20
CLDFGBKD_01583 8.9e-36
CLDFGBKD_01584 7.2e-64 eae N domain, Protein
CLDFGBKD_01585 8.1e-18
CLDFGBKD_01587 5.3e-96 NT phage tail tape measure protein
CLDFGBKD_01589 3.4e-15 ebh 2.1.1.80, 3.1.1.61 S cellulase activity
CLDFGBKD_01590 6e-60 ebh 2.1.1.80, 3.1.1.61 S cellulase activity
CLDFGBKD_01592 1.1e-31 L HTH-like domain
CLDFGBKD_01593 2.1e-12 L HTH-like domain
CLDFGBKD_01594 6.2e-42 hup L Belongs to the bacterial histone-like protein family
CLDFGBKD_01595 0.0 S Lysylphosphatidylglycerol synthase TM region
CLDFGBKD_01596 9.5e-280 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
CLDFGBKD_01597 3.8e-290 S PGAP1-like protein
CLDFGBKD_01598 4.7e-47
CLDFGBKD_01599 1e-44
CLDFGBKD_01600 6.8e-163 S von Willebrand factor (vWF) type A domain
CLDFGBKD_01601 1.1e-184 S von Willebrand factor (vWF) type A domain
CLDFGBKD_01602 5.4e-90
CLDFGBKD_01603 4.1e-170 S Protein of unknown function DUF58
CLDFGBKD_01604 9.6e-192 moxR S ATPase family associated with various cellular activities (AAA)
CLDFGBKD_01605 3.2e-132 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CLDFGBKD_01606 5.7e-73 S LytR cell envelope-related transcriptional attenuator
CLDFGBKD_01607 1.4e-37 K 'Cold-shock' DNA-binding domain
CLDFGBKD_01608 4.7e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
CLDFGBKD_01609 1.7e-34 S Proteins of 100 residues with WXG
CLDFGBKD_01610 8.6e-66
CLDFGBKD_01611 5.6e-133 KT Response regulator receiver domain protein
CLDFGBKD_01612 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
CLDFGBKD_01613 6.5e-66 cspB K 'Cold-shock' DNA-binding domain
CLDFGBKD_01614 1.3e-162 S Protein of unknown function (DUF3027)
CLDFGBKD_01615 2.8e-174 uspA T Belongs to the universal stress protein A family
CLDFGBKD_01616 0.0 clpC O ATPase family associated with various cellular activities (AAA)
CLDFGBKD_01617 0.0 3.1.3.5 F 5'-nucleotidase, C-terminal domain
CLDFGBKD_01618 6.5e-270 pip S YhgE Pip domain protein
CLDFGBKD_01619 0.0 pip S YhgE Pip domain protein
CLDFGBKD_01620 5.5e-141 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
CLDFGBKD_01621 9.8e-59 S Protein of unknown function (DUF4235)
CLDFGBKD_01622 4.2e-135 G Phosphoglycerate mutase family
CLDFGBKD_01623 1.1e-247 amyE G Bacterial extracellular solute-binding protein
CLDFGBKD_01624 1.1e-181 K Psort location Cytoplasmic, score
CLDFGBKD_01625 2.6e-147 msmF G Binding-protein-dependent transport system inner membrane component
CLDFGBKD_01626 4.4e-152 rafG G ABC transporter permease
CLDFGBKD_01627 2.1e-101 S Protein of unknown function, DUF624
CLDFGBKD_01628 1.8e-255 aroP E aromatic amino acid transport protein AroP K03293
CLDFGBKD_01629 6.1e-123 V ABC transporter
CLDFGBKD_01630 0.0 V FtsX-like permease family
CLDFGBKD_01631 2.6e-267 cycA E Amino acid permease
CLDFGBKD_01632 7.8e-78 ydgJ K helix_turn_helix multiple antibiotic resistance protein
CLDFGBKD_01633 0.0 lmrA1 V ABC transporter, ATP-binding protein
CLDFGBKD_01634 0.0 lmrA2 V ABC transporter transmembrane region
CLDFGBKD_01635 1.4e-128 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
CLDFGBKD_01639 8e-178 ebh 2.1.1.80, 3.1.1.61 S cellulase activity
CLDFGBKD_01641 5.3e-133 MA20_18055 DNT domain protein
CLDFGBKD_01644 6.8e-70
CLDFGBKD_01647 1.6e-60
CLDFGBKD_01648 6.8e-40
CLDFGBKD_01649 4.8e-119 S Phage major capsid protein E
CLDFGBKD_01650 1.6e-55
CLDFGBKD_01652 1e-92
CLDFGBKD_01653 2.8e-211
CLDFGBKD_01654 0.0 S Terminase
CLDFGBKD_01657 3.9e-22 V HNH endonuclease
CLDFGBKD_01662 1.6e-11 K Helix-turn-helix domain
CLDFGBKD_01665 1.9e-85 K Bacterial regulatory proteins, tetR family
CLDFGBKD_01666 0.0 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
CLDFGBKD_01667 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
CLDFGBKD_01668 2.3e-162
CLDFGBKD_01669 0.0 S Uncharacterised protein conserved in bacteria (DUF2194)
CLDFGBKD_01670 1.8e-278 pelF GT4 M Domain of unknown function (DUF3492)
CLDFGBKD_01671 5.2e-268 pelG S Putative exopolysaccharide Exporter (EPS-E)
CLDFGBKD_01672 7.5e-306 cotH M CotH kinase protein
CLDFGBKD_01673 1e-156 P VTC domain
CLDFGBKD_01674 2.3e-111 S Domain of unknown function (DUF4956)
CLDFGBKD_01675 0.0 yliE T Putative diguanylate phosphodiesterase
CLDFGBKD_01676 0.0 V ABC transporter, ATP-binding protein
CLDFGBKD_01677 0.0 V ABC transporter transmembrane region
CLDFGBKD_01678 2.9e-137 rbsR K helix_turn _helix lactose operon repressor
CLDFGBKD_01679 1.9e-164 rihB 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
CLDFGBKD_01680 1.3e-183 EGP Major facilitator Superfamily
CLDFGBKD_01681 6.2e-244 G Bacterial extracellular solute-binding protein
CLDFGBKD_01682 1.5e-124
CLDFGBKD_01683 4.3e-184 nusA K Participates in both transcription termination and antitermination
CLDFGBKD_01684 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CLDFGBKD_01685 1.4e-78 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CLDFGBKD_01686 2.4e-212 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CLDFGBKD_01687 3.1e-217 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
CLDFGBKD_01688 2.4e-276 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CLDFGBKD_01689 3.9e-92
CLDFGBKD_01691 1.5e-124 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CLDFGBKD_01692 8.7e-124 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CLDFGBKD_01694 1.7e-272 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CLDFGBKD_01695 1.5e-68 K Transcriptional regulator
CLDFGBKD_01696 6.9e-187 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
CLDFGBKD_01697 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CLDFGBKD_01698 0.0 crr 2.7.1.193 G pts system, glucose-specific IIABC component
CLDFGBKD_01699 3.9e-52 ycgR S Predicted permease
CLDFGBKD_01700 8.9e-136 S TIGRFAM TIGR03943 family protein
CLDFGBKD_01701 5.2e-84 zur P Ferric uptake regulator family
CLDFGBKD_01702 2.1e-63
CLDFGBKD_01703 1.3e-47 tetR K Transcriptional regulator C-terminal region
CLDFGBKD_01704 2e-84 ylbB V FtsX-like permease family
CLDFGBKD_01705 9.1e-69 zur P Belongs to the Fur family
CLDFGBKD_01706 2.7e-224 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CLDFGBKD_01707 7.3e-86 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CLDFGBKD_01708 2.8e-177 adh3 C Zinc-binding dehydrogenase
CLDFGBKD_01709 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CLDFGBKD_01710 6.5e-202 macB_8 V MacB-like periplasmic core domain
CLDFGBKD_01711 2.8e-120 M Conserved repeat domain
CLDFGBKD_01712 2.3e-123 V ATPases associated with a variety of cellular activities
CLDFGBKD_01714 3.7e-216 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
CLDFGBKD_01715 6.8e-156 K Helix-turn-helix domain, rpiR family
CLDFGBKD_01716 0.0 G Alpha-L-arabinofuranosidase C-terminal domain
CLDFGBKD_01717 2.6e-28
CLDFGBKD_01718 2.6e-33 iaaA 3.4.19.5, 3.5.1.1 E Asparaginase
CLDFGBKD_01719 7e-273 EK Alanine-glyoxylate amino-transferase
CLDFGBKD_01720 4e-113 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
CLDFGBKD_01721 3.1e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
CLDFGBKD_01722 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
CLDFGBKD_01723 3.9e-248 dgt 3.1.5.1 F Phosphohydrolase-associated domain
CLDFGBKD_01724 1.8e-248 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CLDFGBKD_01725 6.3e-271 yhdG E aromatic amino acid transport protein AroP K03293
CLDFGBKD_01726 2.7e-102 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CLDFGBKD_01727 6.8e-92 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
CLDFGBKD_01728 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
CLDFGBKD_01729 5.5e-295 enhA_2 S L,D-transpeptidase catalytic domain
CLDFGBKD_01730 1.5e-132 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
CLDFGBKD_01731 7.1e-94 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
CLDFGBKD_01733 1.6e-170 EGP Major Facilitator Superfamily
CLDFGBKD_01734 1.6e-150 iunH2 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
CLDFGBKD_01735 9.3e-09 sapF E ATPases associated with a variety of cellular activities
CLDFGBKD_01736 1.4e-121 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
CLDFGBKD_01737 8.8e-125 EP Binding-protein-dependent transport system inner membrane component
CLDFGBKD_01738 7.1e-162 P Binding-protein-dependent transport system inner membrane component
CLDFGBKD_01739 2.4e-282 E ABC transporter, substrate-binding protein, family 5
CLDFGBKD_01740 4.5e-244 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CLDFGBKD_01741 9.3e-141 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
CLDFGBKD_01742 7.1e-264 G Bacterial extracellular solute-binding protein
CLDFGBKD_01744 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
CLDFGBKD_01745 3e-112 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
CLDFGBKD_01746 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
CLDFGBKD_01747 5e-148 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
CLDFGBKD_01748 1.3e-150 yecS E Binding-protein-dependent transport system inner membrane component
CLDFGBKD_01749 5.5e-167 pknD ET ABC transporter, substrate-binding protein, family 3
CLDFGBKD_01750 1.7e-144 pknD ET ABC transporter, substrate-binding protein, family 3
CLDFGBKD_01751 1.8e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
CLDFGBKD_01752 1.1e-155 usp 3.5.1.28 CBM50 D CHAP domain protein
CLDFGBKD_01753 5.4e-159 ftsX D Part of the ABC transporter FtsEX involved in cellular division
CLDFGBKD_01754 1.6e-176 ftsE D Cell division ATP-binding protein FtsE
CLDFGBKD_01755 2.4e-206 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CLDFGBKD_01756 1.2e-252 S Domain of unknown function (DUF4143)
CLDFGBKD_01757 2.2e-271 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
CLDFGBKD_01758 1.2e-123 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
CLDFGBKD_01759 3.2e-257 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CLDFGBKD_01760 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
CLDFGBKD_01761 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CLDFGBKD_01762 1e-165 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CLDFGBKD_01763 4.3e-130 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
CLDFGBKD_01764 2.5e-226 G Major Facilitator Superfamily
CLDFGBKD_01765 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
CLDFGBKD_01766 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
CLDFGBKD_01767 4.9e-260 KLT Protein tyrosine kinase
CLDFGBKD_01768 6.1e-154 S Fibronectin type 3 domain
CLDFGBKD_01769 0.0 S Fibronectin type 3 domain
CLDFGBKD_01770 4e-176 S ATPase family associated with various cellular activities (AAA)
CLDFGBKD_01771 1e-221 S Protein of unknown function DUF58
CLDFGBKD_01772 0.0 E Transglutaminase-like superfamily
CLDFGBKD_01773 6.1e-25 3.1.3.16 T Sigma factor PP2C-like phosphatases
CLDFGBKD_01774 4e-70 B Belongs to the OprB family
CLDFGBKD_01775 1.7e-87 T Forkhead associated domain
CLDFGBKD_01776 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CLDFGBKD_01777 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CLDFGBKD_01778 5.8e-108
CLDFGBKD_01779 2.5e-183 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
CLDFGBKD_01780 2.9e-114 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
CLDFGBKD_01781 1.2e-252 S UPF0210 protein
CLDFGBKD_01782 8.4e-44 gcvR T Belongs to the UPF0237 family
CLDFGBKD_01783 0.0 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
CLDFGBKD_01784 8.5e-188 K helix_turn _helix lactose operon repressor
CLDFGBKD_01785 1.4e-100 S Protein of unknown function, DUF624
CLDFGBKD_01786 7.6e-169 G Binding-protein-dependent transport system inner membrane component
CLDFGBKD_01787 6.1e-171 G Binding-protein-dependent transport system inner membrane component
CLDFGBKD_01788 0.0 G Bacterial extracellular solute-binding protein
CLDFGBKD_01792 1.1e-161 S PAC2 family
CLDFGBKD_01793 1.4e-153 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
CLDFGBKD_01794 2.8e-156 G Fructosamine kinase
CLDFGBKD_01795 9.3e-116 L Phage integrase family
CLDFGBKD_01797 2.4e-11 S Predicted membrane protein (DUF2335)
CLDFGBKD_01798 4.8e-71
CLDFGBKD_01800 2.6e-222 L Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CLDFGBKD_01801 4.4e-149 dcm 2.1.1.37 H Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
CLDFGBKD_01802 2.3e-16
CLDFGBKD_01803 1.5e-17
CLDFGBKD_01806 7.3e-43 S P22_AR N-terminal domain
CLDFGBKD_01811 1.4e-49 rusA 3.1.22.4 L Endodeoxyribonuclease RusA
CLDFGBKD_01814 7e-20
CLDFGBKD_01816 2.1e-164
CLDFGBKD_01817 5.1e-40 L single-stranded DNA binding
CLDFGBKD_01819 0.0 T Bifunctional DNA primase/polymerase, N-terminal
CLDFGBKD_01824 1.6e-07
CLDFGBKD_01825 1.7e-37
CLDFGBKD_01826 6.7e-86 J tRNA 5'-leader removal
CLDFGBKD_01828 1.9e-44 ytrE_1 3.6.3.21 V ABC transporter
CLDFGBKD_01829 9.4e-23 V efflux transmembrane transporter activity
CLDFGBKD_01830 5.6e-56
CLDFGBKD_01831 5.8e-112 K helix_turn_helix, mercury resistance
CLDFGBKD_01832 1.1e-74 garA T Inner membrane component of T3SS, cytoplasmic domain
CLDFGBKD_01833 5e-140 S Bacterial protein of unknown function (DUF881)
CLDFGBKD_01834 1.2e-28 sbp S Protein of unknown function (DUF1290)
CLDFGBKD_01835 1.6e-124 S Bacterial protein of unknown function (DUF881)
CLDFGBKD_01836 6e-106 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CLDFGBKD_01837 1e-156 hisG 2.4.2.17 F ATP phosphoribosyltransferase
CLDFGBKD_01838 9.9e-42 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
CLDFGBKD_01839 7.7e-99 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
CLDFGBKD_01840 3.4e-185 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CLDFGBKD_01841 6.2e-157 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
CLDFGBKD_01842 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
CLDFGBKD_01843 1.4e-132 S SOS response associated peptidase (SRAP)
CLDFGBKD_01844 4.8e-154 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
CLDFGBKD_01845 1.9e-253 mmuP E amino acid
CLDFGBKD_01846 7.3e-88 EGP Major facilitator Superfamily
CLDFGBKD_01847 6e-188 V VanZ like family
CLDFGBKD_01848 2.2e-50 cefD 5.1.1.17 E Aminotransferase, class V
CLDFGBKD_01849 1.3e-90 MA20_25245 K FR47-like protein
CLDFGBKD_01850 8.4e-27 S Uncharacterized protein conserved in bacteria (DUF2316)
CLDFGBKD_01851 8e-99 S Acetyltransferase (GNAT) domain
CLDFGBKD_01856 1.2e-189 L Psort location Cytoplasmic, score 8.87
CLDFGBKD_01857 1.8e-08
CLDFGBKD_01858 3.4e-125 KL Superfamily II DNA RNA helicases, SNF2 family
CLDFGBKD_01860 6.3e-09
CLDFGBKD_01861 5e-136 pgp 3.1.3.18 S HAD-hyrolase-like
CLDFGBKD_01862 1.1e-61 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
CLDFGBKD_01863 0.0 helY L DEAD DEAH box helicase
CLDFGBKD_01864 1.5e-47
CLDFGBKD_01865 0.0 pafB K WYL domain
CLDFGBKD_01866 3.8e-295 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
CLDFGBKD_01867 8.6e-206 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
CLDFGBKD_01869 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
CLDFGBKD_01870 7.7e-143 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
CLDFGBKD_01871 4.6e-161 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
CLDFGBKD_01872 2.6e-30
CLDFGBKD_01873 3.8e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
CLDFGBKD_01874 1.6e-120 cah 4.2.1.1 P Reversible hydration of carbon dioxide
CLDFGBKD_01875 3.5e-72 V Forkhead associated domain
CLDFGBKD_01876 2.8e-202 S AAA ATPase domain
CLDFGBKD_01877 1e-235 ytfL P Transporter associated domain
CLDFGBKD_01878 1.6e-82 dps P Belongs to the Dps family
CLDFGBKD_01879 1.4e-256 S Domain of unknown function (DUF4143)
CLDFGBKD_01881 3.3e-145 S Protein of unknown function DUF45
CLDFGBKD_01882 1.9e-202 S Domain of unknown function (DUF4143)
CLDFGBKD_01883 4.8e-30 S phosphoglycolate phosphatase activity
CLDFGBKD_01884 3.2e-36 K Helix-turn-helix domain, rpiR family
CLDFGBKD_01885 1.8e-114 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
CLDFGBKD_01886 5.7e-82 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
CLDFGBKD_01887 1.7e-76 phnE 3.6.1.63 U Binding-protein-dependent transport system inner membrane component
CLDFGBKD_01888 1.7e-81 3.6.1.63 U Binding-protein-dependent transport system inner membrane component
CLDFGBKD_01889 6.4e-70 cpdB 3.1.3.6, 3.1.4.16 F Calcineurin-like phosphoesterase
CLDFGBKD_01892 1.7e-07 L Phage integrase family
CLDFGBKD_01894 5.6e-38
CLDFGBKD_01895 1.2e-32 tnpA L Transposase
CLDFGBKD_01896 1.2e-39 L PFAM Integrase catalytic
CLDFGBKD_01897 3e-153 K Bacterial transcriptional regulator
CLDFGBKD_01898 2.7e-132 hmgR K Sugar-specific transcriptional regulator TrmB
CLDFGBKD_01899 4.4e-139 QT PucR C-terminal helix-turn-helix domain
CLDFGBKD_01900 0.0
CLDFGBKD_01901 5.5e-140 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
CLDFGBKD_01902 1e-13 bioY S BioY family
CLDFGBKD_01903 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
CLDFGBKD_01904 1.4e-292 pccB I Carboxyl transferase domain
CLDFGBKD_01905 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
CLDFGBKD_01907 5.8e-63 S N-methyltransferase activity
CLDFGBKD_01912 1.5e-29 purL 1.17.4.1, 2.1.1.37, 6.3.5.3 L C-5 cytosine-specific DNA methylase
CLDFGBKD_01913 5.5e-100 ydiP 2.1.1.37 H Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
CLDFGBKD_01917 2.3e-61 L Resolvase, N terminal domain
CLDFGBKD_01918 9.3e-189 L Helix-turn-helix domain
CLDFGBKD_01919 7.5e-29 K RNA polymerase II activating transcription factor binding
CLDFGBKD_01920 4e-50 int L Phage integrase, N-terminal SAM-like domain
CLDFGBKD_01921 3.7e-108 dprA LU DNA recombination-mediator protein A
CLDFGBKD_01922 5.1e-73 comF S competence protein
CLDFGBKD_01924 1.5e-258 S Domain of unknown function (DUF4143)
CLDFGBKD_01925 0.0 V FtsX-like permease family
CLDFGBKD_01926 1.2e-123 V ABC transporter
CLDFGBKD_01927 1e-108 K Bacterial regulatory proteins, tetR family
CLDFGBKD_01928 2e-159 tnp3512a L Transposase
CLDFGBKD_01929 4.6e-191 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
CLDFGBKD_01930 3e-16 K MerR family regulatory protein
CLDFGBKD_01931 3.8e-10 K MerR family regulatory protein
CLDFGBKD_01932 2.4e-87 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CLDFGBKD_01933 6.8e-57 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CLDFGBKD_01934 7e-33 S Psort location CytoplasmicMembrane, score
CLDFGBKD_01935 2.7e-186 MA20_14895 S Conserved hypothetical protein 698
CLDFGBKD_01936 2.7e-82 rlrG K Bacterial regulatory helix-turn-helix protein, lysR family
CLDFGBKD_01937 6.8e-231 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CLDFGBKD_01938 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CLDFGBKD_01939 1.6e-79 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
CLDFGBKD_01940 2.1e-61 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CLDFGBKD_01941 8.1e-17 L Transposase and inactivated derivatives IS30 family
CLDFGBKD_01942 3e-18 L Helix-turn-helix domain
CLDFGBKD_01943 1.4e-87 V Abi-like protein
CLDFGBKD_01944 2.1e-183 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
CLDFGBKD_01945 3.7e-61 KT Peptidase S24-like
CLDFGBKD_01946 3.5e-57 ctsW S Phosphoribosyl transferase domain
CLDFGBKD_01947 6.3e-148 cof 5.2.1.8 T Eukaryotic phosphomannomutase
CLDFGBKD_01948 3.3e-64 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
CLDFGBKD_01949 9.9e-267
CLDFGBKD_01950 0.0 S Glycosyl transferase, family 2
CLDFGBKD_01951 4.7e-56 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
CLDFGBKD_01952 1.1e-163 K Cell envelope-related transcriptional attenuator domain
CLDFGBKD_01953 0.0 D FtsK/SpoIIIE family
CLDFGBKD_01954 1.9e-46 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
CLDFGBKD_01956 2e-132 yplQ S Haemolysin-III related
CLDFGBKD_01957 5.7e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CLDFGBKD_01958 8.9e-74 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
CLDFGBKD_01959 1.2e-277 sdaA 4.3.1.17 E Serine dehydratase alpha chain
CLDFGBKD_01960 8.3e-94
CLDFGBKD_01961 3.2e-158 S Fic/DOC family
CLDFGBKD_01962 3.5e-244 S HipA-like C-terminal domain
CLDFGBKD_01964 1.5e-73
CLDFGBKD_01965 1.3e-93 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CLDFGBKD_01966 1.3e-203 3.2.1.24 GH38 G Alpha mannosidase, middle domain
CLDFGBKD_01967 2.4e-255 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
CLDFGBKD_01968 2.5e-171 dppB EP Binding-protein-dependent transport system inner membrane component
CLDFGBKD_01969 6.8e-175 dppC EP Binding-protein-dependent transport system inner membrane component
CLDFGBKD_01970 5.8e-300 P Belongs to the ABC transporter superfamily
CLDFGBKD_01971 3.6e-165 K helix_turn _helix lactose operon repressor
CLDFGBKD_01972 1.8e-234 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
CLDFGBKD_01973 2.6e-252 S Metal-independent alpha-mannosidase (GH125)
CLDFGBKD_01974 8e-168 2.7.1.4 G pfkB family carbohydrate kinase
CLDFGBKD_01975 9.4e-220 GK ROK family
CLDFGBKD_01976 8.8e-162 2.7.1.2 GK ROK family
CLDFGBKD_01977 3.7e-202 GK ROK family
CLDFGBKD_01978 8.1e-151 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
CLDFGBKD_01979 2.9e-235 nagA 3.5.1.25 G Amidohydrolase family
CLDFGBKD_01980 7.4e-194 G Bacterial extracellular solute-binding protein
CLDFGBKD_01981 1.2e-105 U Binding-protein-dependent transport system inner membrane component
CLDFGBKD_01982 7.9e-126 G Binding-protein-dependent transport systems inner membrane component
CLDFGBKD_01984 2.7e-75 3.6.1.55 F NUDIX domain
CLDFGBKD_01985 3.4e-302 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
CLDFGBKD_01986 4.4e-159 K Psort location Cytoplasmic, score
CLDFGBKD_01987 2.6e-286 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
CLDFGBKD_01988 0.0 smc D Required for chromosome condensation and partitioning
CLDFGBKD_01989 2.8e-190 V Acetyltransferase (GNAT) domain
CLDFGBKD_01990 4.6e-296 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CLDFGBKD_01991 1.2e-132 sigH K Belongs to the sigma-70 factor family. ECF subfamily
CLDFGBKD_01992 1.6e-54
CLDFGBKD_01993 1.3e-187 galM 5.1.3.3 G Aldose 1-epimerase
CLDFGBKD_01994 1.1e-191 galM 5.1.3.3 G Aldose 1-epimerase
CLDFGBKD_01995 3.3e-178 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CLDFGBKD_01996 4.2e-89 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CLDFGBKD_01997 4.4e-197 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
CLDFGBKD_01998 2.5e-135 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
CLDFGBKD_01999 2e-80 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CLDFGBKD_02000 4.3e-26 rpmI J Ribosomal protein L35
CLDFGBKD_02001 1.3e-61 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CLDFGBKD_02002 1.5e-169 xerD D recombinase XerD
CLDFGBKD_02003 8.1e-150 soj D CobQ CobB MinD ParA nucleotide binding domain protein
CLDFGBKD_02004 1.9e-156 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CLDFGBKD_02005 1.8e-114 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CLDFGBKD_02006 4.7e-154 nrtR 3.6.1.55 F NUDIX hydrolase
CLDFGBKD_02007 4.1e-250 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
CLDFGBKD_02008 5.3e-303 nadB 1.3.5.4, 1.4.3.16, 2.4.2.19 H Catalyzes the oxidation of L-aspartate to iminoaspartate
CLDFGBKD_02009 7.7e-163 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, N-terminal domain
CLDFGBKD_02010 1.1e-215 iscS1 2.8.1.7 E Aminotransferase class-V
CLDFGBKD_02011 0.0 typA T Elongation factor G C-terminus
CLDFGBKD_02012 1.7e-11 EGP Major facilitator Superfamily
CLDFGBKD_02013 2.9e-38 L PFAM Integrase catalytic
CLDFGBKD_02014 5.7e-74
CLDFGBKD_02015 4.3e-191 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
CLDFGBKD_02016 3.8e-193 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
CLDFGBKD_02017 2e-42
CLDFGBKD_02018 3.5e-178 xerC D Belongs to the 'phage' integrase family. XerC subfamily
CLDFGBKD_02019 1e-309 E ABC transporter, substrate-binding protein, family 5
CLDFGBKD_02020 2.2e-152 dppB EP Binding-protein-dependent transport system inner membrane component
CLDFGBKD_02021 8.7e-171 dppC EP N-terminal TM domain of oligopeptide transport permease C
CLDFGBKD_02022 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
CLDFGBKD_02023 6.3e-170 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
CLDFGBKD_02024 5.1e-148 S Protein of unknown function (DUF3710)
CLDFGBKD_02025 7.3e-133 S Protein of unknown function (DUF3159)
CLDFGBKD_02026 1.6e-241 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CLDFGBKD_02027 2.2e-104
CLDFGBKD_02028 0.0 ctpE P E1-E2 ATPase
CLDFGBKD_02029 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CLDFGBKD_02030 3e-57 relB L RelB antitoxin
CLDFGBKD_02031 7.9e-85 S PIN domain
CLDFGBKD_02032 0.0 S Protein of unknown function DUF262
CLDFGBKD_02033 2.5e-118 E Psort location Cytoplasmic, score 8.87
CLDFGBKD_02034 1.1e-124 ybhL S Belongs to the BI1 family
CLDFGBKD_02035 9.1e-176 ydeD EG EamA-like transporter family
CLDFGBKD_02036 3.8e-135 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
CLDFGBKD_02037 4e-278 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CLDFGBKD_02038 5.7e-183 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CLDFGBKD_02039 3.5e-137 fic D Fic/DOC family
CLDFGBKD_02040 0.0 ftsK D FtsK SpoIIIE family protein
CLDFGBKD_02041 6.5e-119 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CLDFGBKD_02042 3.1e-90 cinA 3.5.1.42 S Belongs to the CinA family
CLDFGBKD_02043 1.1e-81 K Helix-turn-helix XRE-family like proteins
CLDFGBKD_02044 2e-38 S Protein of unknown function (DUF3046)
CLDFGBKD_02045 2.6e-198 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CLDFGBKD_02046 2.1e-100 recX S Modulates RecA activity
CLDFGBKD_02047 4.2e-113 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CLDFGBKD_02048 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
CLDFGBKD_02049 3.1e-65 E GDSL-like Lipase/Acylhydrolase family
CLDFGBKD_02050 2.1e-175 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CLDFGBKD_02051 5.5e-73
CLDFGBKD_02052 1.7e-128 plsC2 2.3.1.51 I Phosphate acyltransferases
CLDFGBKD_02053 0.0 pknL 2.7.11.1 KLT PASTA
CLDFGBKD_02054 1.2e-189 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
CLDFGBKD_02055 7.6e-123
CLDFGBKD_02056 5.8e-189 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
CLDFGBKD_02057 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
CLDFGBKD_02058 1.9e-199 G Major Facilitator Superfamily
CLDFGBKD_02059 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CLDFGBKD_02060 6.1e-82 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
CLDFGBKD_02061 5.1e-47 S Domain of unknown function (DUF4193)
CLDFGBKD_02062 3.6e-178 S Protein of unknown function (DUF3071)
CLDFGBKD_02063 8.1e-235 S Type I phosphodiesterase / nucleotide pyrophosphatase
CLDFGBKD_02064 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
CLDFGBKD_02065 6.9e-123 KT RESPONSE REGULATOR receiver
CLDFGBKD_02066 0.0 lhr L DEAD DEAH box helicase
CLDFGBKD_02067 1.4e-16 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CLDFGBKD_02068 7.6e-10 L Transposase DDE domain
CLDFGBKD_02069 1.2e-46
CLDFGBKD_02070 5.2e-121
CLDFGBKD_02073 5.8e-35 2.7.13.3 T Histidine kinase
CLDFGBKD_02074 2.5e-162 2.7.13.3 T Histidine kinase
CLDFGBKD_02075 1.1e-47 K helix_turn_helix, Lux Regulon
CLDFGBKD_02076 3e-95
CLDFGBKD_02077 4e-143 M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLDFGBKD_02078 1.4e-124 lolD Q ATPases associated with a variety of cellular activities
CLDFGBKD_02079 1e-175 V MacB-like periplasmic core domain
CLDFGBKD_02080 2.7e-39 relB L RelB antitoxin
CLDFGBKD_02081 3.8e-50 S Bacterial toxin of type II toxin-antitoxin system, YafQ
CLDFGBKD_02082 1.5e-34 2.7.13.3 T Histidine kinase
CLDFGBKD_02083 8e-94 rpoE4 K Sigma-70 region 2
CLDFGBKD_02084 9.1e-17 S Psort location CytoplasmicMembrane, score
CLDFGBKD_02085 4.8e-95
CLDFGBKD_02086 2.5e-125
CLDFGBKD_02087 3.8e-162 yfiL V ATPases associated with a variety of cellular activities
CLDFGBKD_02088 2e-70
CLDFGBKD_02089 9.1e-62
CLDFGBKD_02090 4.5e-147 S EamA-like transporter family
CLDFGBKD_02091 1.9e-99
CLDFGBKD_02092 9e-234 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
CLDFGBKD_02093 7.3e-252 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
CLDFGBKD_02094 6.9e-122 glpR K DeoR C terminal sensor domain
CLDFGBKD_02095 1.3e-226 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
CLDFGBKD_02096 5.8e-234 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
CLDFGBKD_02097 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
CLDFGBKD_02098 6.3e-132 glxR K helix_turn_helix, cAMP Regulatory protein
CLDFGBKD_02099 6.9e-198 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
CLDFGBKD_02100 2.4e-192 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
CLDFGBKD_02101 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
CLDFGBKD_02102 3.3e-250 S Uncharacterized conserved protein (DUF2183)
CLDFGBKD_02103 7.4e-200 V AAA domain, putative AbiEii toxin, Type IV TA system
CLDFGBKD_02104 1.9e-142 S ABC-2 family transporter protein
CLDFGBKD_02105 6.3e-138
CLDFGBKD_02106 2e-59
CLDFGBKD_02108 3.6e-238 T Histidine kinase
CLDFGBKD_02109 1.2e-120 K helix_turn_helix, Lux Regulon
CLDFGBKD_02112 1.1e-103 M Peptidase family M23
CLDFGBKD_02113 4.9e-256 G ABC transporter substrate-binding protein
CLDFGBKD_02114 8.7e-242 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
CLDFGBKD_02115 5.3e-209 guaB 1.1.1.205 F IMP dehydrogenase family protein
CLDFGBKD_02116 1.5e-70
CLDFGBKD_02117 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
CLDFGBKD_02118 1.3e-87 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
CLDFGBKD_02119 1.2e-70 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
CLDFGBKD_02120 4e-229 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
CLDFGBKD_02121 1.1e-158 mhpC I Alpha/beta hydrolase family
CLDFGBKD_02122 7.3e-126 F Domain of unknown function (DUF4916)
CLDFGBKD_02123 1.9e-59 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
CLDFGBKD_02124 1.7e-171 S G5
CLDFGBKD_02125 1.1e-18 hipB K Helix-turn-helix XRE-family like proteins
CLDFGBKD_02126 3.3e-133 2.7.11.1 S HipA-like C-terminal domain
CLDFGBKD_02127 1.1e-142
CLDFGBKD_02128 8.9e-238 wcoI DM Psort location CytoplasmicMembrane, score
CLDFGBKD_02129 8.7e-262 S Psort location CytoplasmicMembrane, score 9.99
CLDFGBKD_02130 1e-64 S Abi-like protein
CLDFGBKD_02131 6.4e-34 L Transposase and inactivated derivatives IS30 family
CLDFGBKD_02132 1.9e-15 V Abi-like protein
CLDFGBKD_02133 5.9e-185 V Abi-like protein
CLDFGBKD_02134 9.9e-263 L Phage integrase family
CLDFGBKD_02135 7.4e-146 fic D Fic/DOC family
CLDFGBKD_02136 3.3e-26
CLDFGBKD_02138 8.6e-11 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
CLDFGBKD_02139 1.3e-202 L Transposase, Mutator family
CLDFGBKD_02140 1.4e-33 D Filamentation induced by cAMP protein fic
CLDFGBKD_02141 3.9e-240 EGP Major facilitator Superfamily
CLDFGBKD_02142 2.6e-115 L PFAM Integrase catalytic
CLDFGBKD_02143 7.5e-40 L HTH-like domain
CLDFGBKD_02144 1.1e-53 L transposase activity
CLDFGBKD_02145 0.0 sprF 4.6.1.1 M Cell surface antigen C-terminus
CLDFGBKD_02147 7.8e-126 K Helix-turn-helix domain protein
CLDFGBKD_02148 5.2e-27
CLDFGBKD_02149 8.1e-65
CLDFGBKD_02150 1.7e-35
CLDFGBKD_02151 3.5e-103 parA D AAA domain
CLDFGBKD_02152 8e-83 S Transcription factor WhiB
CLDFGBKD_02153 8.7e-234 S Helix-turn-helix domain
CLDFGBKD_02154 2.2e-21
CLDFGBKD_02155 3.5e-13
CLDFGBKD_02157 3.2e-158 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
CLDFGBKD_02158 4e-200 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
CLDFGBKD_02161 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CLDFGBKD_02162 7.7e-111 hit 2.7.7.53 FG HIT domain
CLDFGBKD_02163 2e-111 yebC K transcriptional regulatory protein
CLDFGBKD_02164 1.1e-96 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
CLDFGBKD_02165 3.4e-88 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
CLDFGBKD_02166 2.6e-189 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
CLDFGBKD_02167 4.3e-37 yajC U Preprotein translocase subunit
CLDFGBKD_02168 1.8e-88 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CLDFGBKD_02169 5.4e-212 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
CLDFGBKD_02170 5.9e-158 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CLDFGBKD_02171 2.8e-236
CLDFGBKD_02172 7.3e-52 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
CLDFGBKD_02173 1.9e-141 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
CLDFGBKD_02174 1.7e-72 XK27_00240 K Fic/DOC family
CLDFGBKD_02175 6.3e-25 XK27_00240 K Fic/DOC family
CLDFGBKD_02176 1.2e-59 yccF S Inner membrane component domain
CLDFGBKD_02177 1.3e-159 ksgA 2.1.1.182 J Methyltransferase domain
CLDFGBKD_02178 2.5e-67 S Cupin 2, conserved barrel domain protein
CLDFGBKD_02179 2.9e-51 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
CLDFGBKD_02180 1.1e-37 L RelB antitoxin
CLDFGBKD_02181 3.3e-244 S HipA-like C-terminal domain
CLDFGBKD_02182 2e-217 G Transmembrane secretion effector
CLDFGBKD_02183 1.2e-118 K Bacterial regulatory proteins, tetR family
CLDFGBKD_02184 1.1e-77 int L Phage integrase, N-terminal SAM-like domain
CLDFGBKD_02185 6.2e-278 L PFAM Integrase catalytic
CLDFGBKD_02186 8.6e-31 S PrgI family protein
CLDFGBKD_02187 0.0 4.2.1.53 S MCRA family
CLDFGBKD_02188 1.2e-74 yneG S Domain of unknown function (DUF4186)
CLDFGBKD_02189 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
CLDFGBKD_02190 9.9e-50 L Transposase
CLDFGBKD_02191 1.3e-49
CLDFGBKD_02192 8.9e-200 S Protein of unknown function DUF262
CLDFGBKD_02193 5.4e-286 S Protein of unknown function DUF262
CLDFGBKD_02196 1.1e-10 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CLDFGBKD_02197 6.7e-278 recB 3.1.11.5, 3.1.12.1, 3.6.4.12 L PD-(D/E)XK nuclease superfamily
CLDFGBKD_02198 1.1e-166 addB 3.6.4.12 L PD-(D/E)XK nuclease superfamily
CLDFGBKD_02199 7.7e-163 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
CLDFGBKD_02200 1.1e-160 K WYL domain
CLDFGBKD_02201 4.8e-125 S Virulence factor BrkB
CLDFGBKD_02202 1.3e-179 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
CLDFGBKD_02203 8.3e-91 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CLDFGBKD_02204 3.2e-38 3.1.21.3 V DivIVA protein
CLDFGBKD_02205 5.5e-44 yggT S YGGT family
CLDFGBKD_02206 1.7e-79 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
CLDFGBKD_02207 3e-186 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CLDFGBKD_02208 5.1e-237 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CLDFGBKD_02209 8.2e-295 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
CLDFGBKD_02210 1.6e-166 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
CLDFGBKD_02211 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
CLDFGBKD_02212 1.5e-230 O AAA domain (Cdc48 subfamily)
CLDFGBKD_02213 3e-145 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
CLDFGBKD_02214 3.6e-61 S Thiamine-binding protein
CLDFGBKD_02215 4.4e-63 2.7.13.3 T Histidine kinase
CLDFGBKD_02216 6.2e-247 O SERine Proteinase INhibitors
CLDFGBKD_02217 1e-190 K helix_turn _helix lactose operon repressor
CLDFGBKD_02218 6.2e-241 lacY P LacY proton/sugar symporter
CLDFGBKD_02219 5.6e-302 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
CLDFGBKD_02220 5.8e-138 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
CLDFGBKD_02221 7.8e-202 P NMT1/THI5 like
CLDFGBKD_02222 1.5e-206 iunH1 3.2.2.1 F nucleoside hydrolase
CLDFGBKD_02223 5.8e-154 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CLDFGBKD_02224 1.3e-112 recO L Involved in DNA repair and RecF pathway recombination
CLDFGBKD_02225 5.8e-284 I acetylesterase activity
CLDFGBKD_02226 4.8e-232 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CLDFGBKD_02227 2.6e-214 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
CLDFGBKD_02228 2e-228 2.7.11.1 NU Tfp pilus assembly protein FimV
CLDFGBKD_02230 2e-44 S Protein of unknown function (DUF3052)
CLDFGBKD_02231 1.1e-158 lon T Belongs to the peptidase S16 family
CLDFGBKD_02232 0.0 S Zincin-like metallopeptidase
CLDFGBKD_02233 1.8e-287 uvrD2 3.6.4.12 L DNA helicase
CLDFGBKD_02234 1.7e-288 mphA S Aminoglycoside phosphotransferase
CLDFGBKD_02235 1.2e-32 S Protein of unknown function (DUF3107)
CLDFGBKD_02236 1.2e-168 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
CLDFGBKD_02237 4.8e-126 S Vitamin K epoxide reductase
CLDFGBKD_02238 2e-163 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
CLDFGBKD_02239 7.2e-144 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
CLDFGBKD_02240 4.8e-154 S Patatin-like phospholipase
CLDFGBKD_02242 1.7e-63 V ABC transporter
CLDFGBKD_02243 4.6e-90 L Transposase and inactivated derivatives IS30 family
CLDFGBKD_02244 3.5e-110 XK27_08050 O prohibitin homologues
CLDFGBKD_02245 4.3e-110 E Binding-protein-dependent transport system inner membrane component
CLDFGBKD_02246 4.8e-135 tcyA ET Bacterial periplasmic substrate-binding proteins
CLDFGBKD_02247 1.9e-138 3.6.3.21 E ATPases associated with a variety of cellular activities
CLDFGBKD_02248 1.4e-34 XAC3035 O Glutaredoxin
CLDFGBKD_02249 1.1e-239 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
CLDFGBKD_02250 3.2e-228 S Peptidase dimerisation domain
CLDFGBKD_02251 0.0 E ATPases associated with a variety of cellular activities
CLDFGBKD_02252 0.0 E Branched-chain amino acid transport system / permease component
CLDFGBKD_02253 7.6e-219 E Receptor family ligand binding region
CLDFGBKD_02254 1.9e-200 4.1.1.37 H Uroporphyrinogen decarboxylase (URO-D)
CLDFGBKD_02255 5e-145 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CLDFGBKD_02256 3.1e-155 E Glyoxalase-like domain
CLDFGBKD_02257 2.5e-42 XAC3035 O Glutaredoxin
CLDFGBKD_02258 4.9e-224 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
CLDFGBKD_02259 3.8e-125 cjaA ET Bacterial periplasmic substrate-binding proteins
CLDFGBKD_02260 4.1e-115 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
CLDFGBKD_02261 6.8e-111 glnP E Binding-protein-dependent transport system inner membrane component
CLDFGBKD_02262 6.4e-98 papP E Binding-protein-dependent transport system inner membrane component
CLDFGBKD_02263 1.2e-117 ypfH S Phospholipase/Carboxylesterase
CLDFGBKD_02264 0.0 tetP J Elongation factor G, domain IV
CLDFGBKD_02265 4.3e-132 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
CLDFGBKD_02267 1.7e-102 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
CLDFGBKD_02268 5.3e-167 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
CLDFGBKD_02269 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CLDFGBKD_02270 1e-238 carA 6.3.5.5 F Belongs to the CarA family
CLDFGBKD_02271 2.7e-76 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CLDFGBKD_02272 4e-104 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CLDFGBKD_02273 1.8e-112 ybbL V ATPases associated with a variety of cellular activities
CLDFGBKD_02274 3.9e-126 ybbM V Uncharacterised protein family (UPF0014)
CLDFGBKD_02275 0.0 G Glycosyl hydrolase family 20, domain 2
CLDFGBKD_02276 4e-201 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
CLDFGBKD_02277 2.2e-11
CLDFGBKD_02278 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
CLDFGBKD_02279 1.1e-34 feoA P FeoA
CLDFGBKD_02281 2.9e-17
CLDFGBKD_02282 1.5e-131 S Sulfite exporter TauE/SafE
CLDFGBKD_02283 2.2e-60 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CLDFGBKD_02285 3.4e-234 EGP Major facilitator Superfamily
CLDFGBKD_02286 1.3e-105 3.1.3.27 E haloacid dehalogenase-like hydrolase
CLDFGBKD_02287 3e-161 3.1.3.73 G Phosphoglycerate mutase family
CLDFGBKD_02288 1.9e-231 rutG F Permease family
CLDFGBKD_02289 1.8e-204 G Glycosyl hydrolase family 20, domain 2
CLDFGBKD_02290 1.5e-31 3.1.3.18 S phosphoglycolate phosphatase activity
CLDFGBKD_02291 8.6e-139 G Extracellular solute-binding protein
CLDFGBKD_02292 2.5e-117 YSH1 S Metallo-beta-lactamase superfamily
CLDFGBKD_02293 2.2e-100 gtsC P Binding-protein-dependent transport system inner membrane component
CLDFGBKD_02294 1.2e-102 gtsB G PFAM Binding-protein-dependent transport system inner membrane component
CLDFGBKD_02295 3.5e-128 malK P Belongs to the ABC transporter superfamily
CLDFGBKD_02296 9.9e-94 M1-431 S Protein of unknown function (DUF1706)
CLDFGBKD_02297 1.3e-114 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CLDFGBKD_02298 8.6e-76 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CLDFGBKD_02299 1.8e-169 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CLDFGBKD_02300 5.1e-14 gntK 2.7.1.12 F Shikimate kinase
CLDFGBKD_02301 2e-233 rspA 4.2.1.8 M mandelate racemase muconate lactonizing
CLDFGBKD_02302 9.2e-195 mtlD 1.1.1.17, 1.1.1.57 G Mannitol dehydrogenase C-terminal domain
CLDFGBKD_02303 1.8e-177 uxaC 5.3.1.12 G Glucuronate isomerase
CLDFGBKD_02304 3.5e-52 FG bis(5'-adenosyl)-triphosphatase activity
CLDFGBKD_02305 3.5e-40 L Psort location Cytoplasmic, score 8.87
CLDFGBKD_02306 3.9e-94 L Integrase core domain
CLDFGBKD_02307 4.5e-35 L PFAM Integrase catalytic
CLDFGBKD_02308 2.2e-87 L PFAM Integrase catalytic
CLDFGBKD_02309 2.2e-121 L IstB-like ATP binding protein
CLDFGBKD_02310 4.6e-68 L Transposase, Mutator family
CLDFGBKD_02311 5.7e-280 M probably involved in cell wall
CLDFGBKD_02312 1.3e-185 K helix_turn _helix lactose operon repressor
CLDFGBKD_02313 3.7e-254 G Bacterial extracellular solute-binding protein
CLDFGBKD_02314 1.6e-158 G Binding-protein-dependent transport system inner membrane component
CLDFGBKD_02315 1.1e-150 P Binding-protein-dependent transport system inner membrane component
CLDFGBKD_02316 2.3e-228 M Protein of unknown function (DUF2961)
CLDFGBKD_02317 4.9e-143 I alpha/beta hydrolase fold
CLDFGBKD_02318 3e-119 V ATPases associated with a variety of cellular activities
CLDFGBKD_02319 2.7e-97 lacR K Transcriptional regulator, LacI family
CLDFGBKD_02320 1.6e-194
CLDFGBKD_02321 1e-133 ytrE V ABC transporter
CLDFGBKD_02322 2.2e-188 V Putative peptidoglycan binding domain
CLDFGBKD_02323 1.1e-119
CLDFGBKD_02324 2.9e-48
CLDFGBKD_02325 4.6e-120 K Transcriptional regulatory protein, C terminal
CLDFGBKD_02326 3.9e-232 qseC 2.7.13.3 T GHKL domain
CLDFGBKD_02327 3.5e-97 K transcriptional regulator
CLDFGBKD_02328 6.4e-37
CLDFGBKD_02329 1.8e-107 3.1.3.48 T Low molecular weight phosphatase family
CLDFGBKD_02330 1.8e-57 L Helix-turn-helix domain
CLDFGBKD_02331 9.2e-86 cps1D M Domain of unknown function (DUF4422)
CLDFGBKD_02332 4.3e-30 lgtD M Glycosyltransferase like family 2
CLDFGBKD_02333 3.9e-13 wzy S EpsG family
CLDFGBKD_02334 5.6e-94 M Psort location Cytoplasmic, score 8.87
CLDFGBKD_02335 1.1e-43 M Glycosyltransferase like family 2
CLDFGBKD_02336 2.2e-35 MA20_43635 M Capsular polysaccharide synthesis protein
CLDFGBKD_02337 1.1e-89 H Core-2/I-Branching enzyme
CLDFGBKD_02338 5.4e-42 L Transposase
CLDFGBKD_02339 0.0 C Domain of unknown function (DUF4365)
CLDFGBKD_02340 1.9e-17 S Bacteriophage abortive infection AbiH
CLDFGBKD_02342 5.9e-88 K Helix-turn-helix XRE-family like proteins
CLDFGBKD_02344 2.1e-157 S enterobacterial common antigen metabolic process
CLDFGBKD_02345 5e-128 T Response regulator receiver domain protein
CLDFGBKD_02346 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CLDFGBKD_02347 1.6e-100 carD K CarD-like/TRCF domain
CLDFGBKD_02348 5.1e-90 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
CLDFGBKD_02349 3.1e-137 znuB U ABC 3 transport family
CLDFGBKD_02350 1.2e-163 znuC P ATPases associated with a variety of cellular activities
CLDFGBKD_02351 7.1e-172 P Zinc-uptake complex component A periplasmic
CLDFGBKD_02352 4.8e-157 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CLDFGBKD_02353 2.3e-252 rpsA J Ribosomal protein S1
CLDFGBKD_02354 1e-73 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CLDFGBKD_02355 2.4e-73 V ABC transporter
CLDFGBKD_02356 6.1e-144 XK27_10205
CLDFGBKD_02358 4e-63 K helix_turn_helix, Lux Regulon
CLDFGBKD_02359 5.7e-55 2.1.1.80, 3.1.1.61 T Histidine kinase
CLDFGBKD_02360 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
CLDFGBKD_02361 3.1e-165 terC P Integral membrane protein, TerC family
CLDFGBKD_02362 2.7e-274 pyk 2.7.1.40 G Pyruvate kinase
CLDFGBKD_02364 2.9e-121 pdtaR T Response regulator receiver domain protein
CLDFGBKD_02365 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CLDFGBKD_02366 2.3e-178 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
CLDFGBKD_02367 7.5e-126 3.6.1.13 L NUDIX domain
CLDFGBKD_02368 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
CLDFGBKD_02370 2.6e-55 L Phage integrase family
CLDFGBKD_02371 9e-71 XK26_04895
CLDFGBKD_02373 4.4e-198 ykiI
CLDFGBKD_02374 2.6e-247 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
CLDFGBKD_02375 7.2e-228 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CLDFGBKD_02376 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
CLDFGBKD_02379 1.7e-128 3.1.3.85 G Phosphoglycerate mutase family
CLDFGBKD_02380 3e-69 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
CLDFGBKD_02381 4.9e-257 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CLDFGBKD_02383 1.2e-191 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CLDFGBKD_02384 2e-269 XK27_09800 I Psort location CytoplasmicMembrane, score 9.99
CLDFGBKD_02385 6.5e-34 XK27_07020 S Domain of unknown function (DUF1846)
CLDFGBKD_02386 7.4e-302 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
CLDFGBKD_02387 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
CLDFGBKD_02388 1.4e-168 metQ P NLPA lipoprotein
CLDFGBKD_02389 8.8e-218 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CLDFGBKD_02390 2.8e-112 metI P Binding-protein-dependent transport system inner membrane component
CLDFGBKD_02391 1.4e-225 S Peptidase dimerisation domain
CLDFGBKD_02392 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CLDFGBKD_02393 8.5e-34
CLDFGBKD_02394 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
CLDFGBKD_02395 3.1e-172 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CLDFGBKD_02396 8.9e-121 S Protein of unknown function (DUF3000)
CLDFGBKD_02397 6e-249 rnd 3.1.13.5 J 3'-5' exonuclease
CLDFGBKD_02398 2.9e-233 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
CLDFGBKD_02399 4.9e-231 clcA_2 P Voltage gated chloride channel
CLDFGBKD_02400 4e-52
CLDFGBKD_02401 2.5e-115 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
CLDFGBKD_02402 6.1e-123 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
CLDFGBKD_02403 7.3e-237 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CLDFGBKD_02406 1.5e-213 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CLDFGBKD_02407 7.2e-151 fmt2 3.2.2.10 S Belongs to the LOG family
CLDFGBKD_02408 1.3e-109 safC S O-methyltransferase
CLDFGBKD_02409 5.6e-175 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
CLDFGBKD_02410 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
CLDFGBKD_02411 1.2e-305 dprA 5.99.1.2 LU DNA recombination-mediator protein A
CLDFGBKD_02412 2e-291 comM O Magnesium chelatase, subunit ChlI C-terminal
CLDFGBKD_02413 4.3e-94 yraN L Belongs to the UPF0102 family
CLDFGBKD_02414 1.4e-164 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
CLDFGBKD_02415 6.1e-249 metY 2.5.1.49 E Aminotransferase class-V
CLDFGBKD_02416 3.3e-145 V ABC transporter, ATP-binding protein
CLDFGBKD_02417 0.0 MV MacB-like periplasmic core domain
CLDFGBKD_02418 2.4e-132 K helix_turn_helix, Lux Regulon
CLDFGBKD_02419 0.0 tcsS2 T Histidine kinase
CLDFGBKD_02420 8e-282 pip 3.4.11.5 S alpha/beta hydrolase fold
CLDFGBKD_02421 1.8e-142 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CLDFGBKD_02422 1.2e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
CLDFGBKD_02423 8.4e-15
CLDFGBKD_02426 2.2e-38 V HNH nucleases
CLDFGBKD_02427 1.8e-07
CLDFGBKD_02428 2.1e-26 S Terminase
CLDFGBKD_02430 3.1e-14
CLDFGBKD_02432 4.6e-104 M Glycosyl hydrolases family 25
CLDFGBKD_02433 1.2e-11 S Putative phage holin Dp-1
CLDFGBKD_02434 0.0 sprF 4.6.1.1 M Cell surface antigen C-terminus
CLDFGBKD_02435 1.6e-43 V ABC-2 type transporter
CLDFGBKD_02436 9.6e-41 V ATPase activity
CLDFGBKD_02437 3.2e-18 V Lanthionine synthetase C-like protein
CLDFGBKD_02439 6.8e-81
CLDFGBKD_02440 0.0 3.2.1.51 GH95 G Glycosyl hydrolase family 65, N-terminal domain
CLDFGBKD_02441 3.3e-256 fucA 3.2.1.51 GH29 G Alpha-L-fucosidase
CLDFGBKD_02442 4.2e-69 fucU 5.1.3.29 G RbsD / FucU transport protein family
CLDFGBKD_02443 4.7e-152 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
CLDFGBKD_02444 3.9e-142 IQ KR domain
CLDFGBKD_02445 7.3e-97 4.2.1.68 M Enolase C-terminal domain-like
CLDFGBKD_02446 4.1e-61
CLDFGBKD_02447 8.6e-63 S PrgI family protein
CLDFGBKD_02448 2.3e-69 trsE U type IV secretory pathway VirB4
CLDFGBKD_02449 6.3e-61 K helix_turn_helix, Lux Regulon
CLDFGBKD_02450 1.7e-56 2.7.13.3 T Histidine kinase
CLDFGBKD_02451 1.7e-171 L Phage integrase family
CLDFGBKD_02452 1.4e-164 K Arac family
CLDFGBKD_02453 1.2e-28 S rRNA binding
CLDFGBKD_02455 1.2e-242 V MatE
CLDFGBKD_02456 0.0 drrC L ABC transporter
CLDFGBKD_02457 1.4e-26 2.7.7.7 L Transposase, Mutator family
CLDFGBKD_02458 2e-80 XK27_00240 K Fic/DOC family
CLDFGBKD_02463 1e-29 K Helix-turn-helix domain
CLDFGBKD_02464 6.4e-38 VY92_07350 S Phage derived protein Gp49-like (DUF891)
CLDFGBKD_02469 2.9e-07
CLDFGBKD_02472 3.4e-91 S N-methyltransferase activity
CLDFGBKD_02475 7.1e-42 usp 3.5.1.28 CBM50 S CHAP domain
CLDFGBKD_02476 2e-45
CLDFGBKD_02482 2.8e-22 NU Tfp pilus assembly protein FimV
CLDFGBKD_02483 0.0 XK27_00515 D Cell surface antigen C-terminus
CLDFGBKD_02484 1.3e-119 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
CLDFGBKD_02485 3.4e-94 K FR47-like protein
CLDFGBKD_02486 4.1e-281 S ATPases associated with a variety of cellular activities
CLDFGBKD_02488 1.9e-181 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
CLDFGBKD_02489 1.2e-100 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
CLDFGBKD_02490 4.8e-76 divIC D Septum formation initiator
CLDFGBKD_02491 3.4e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CLDFGBKD_02492 1.1e-180 1.1.1.65 C Aldo/keto reductase family
CLDFGBKD_02493 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CLDFGBKD_02494 2e-114 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
CLDFGBKD_02495 2e-76 S PIN domain
CLDFGBKD_02496 1.2e-88 2.3.1.183 M Acetyltransferase (GNAT) domain
CLDFGBKD_02497 0.0 S Uncharacterised protein family (UPF0182)
CLDFGBKD_02498 2e-206 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
CLDFGBKD_02499 2.9e-137 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CLDFGBKD_02500 2.1e-100
CLDFGBKD_02501 1.1e-231 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CLDFGBKD_02502 5e-251 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CLDFGBKD_02503 1.4e-281 thrC 4.2.3.1 E Threonine synthase N terminus
CLDFGBKD_02504 3.2e-201 S Protein of unknown function (DUF1648)
CLDFGBKD_02505 7.8e-71 K helix_turn_helix gluconate operon transcriptional repressor
CLDFGBKD_02506 8.8e-25 pacL2 3.6.3.8 P ATPase, P-type transporting, HAD superfamily, subfamily IC
CLDFGBKD_02507 5.2e-70 S ABC-2 family transporter protein
CLDFGBKD_02508 3.6e-118 S ABC-2 family transporter protein
CLDFGBKD_02509 1.4e-170 V ATPases associated with a variety of cellular activities
CLDFGBKD_02510 1.4e-57 K helix_turn_helix gluconate operon transcriptional repressor
CLDFGBKD_02511 1.4e-36 K helix_turn_helix, Lux Regulon
CLDFGBKD_02512 1.2e-31 2.7.13.3 T Histidine kinase
CLDFGBKD_02513 2e-52 EGP Major facilitator Superfamily
CLDFGBKD_02514 1.1e-66 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
CLDFGBKD_02515 4.2e-110 S Haloacid dehalogenase-like hydrolase
CLDFGBKD_02516 2.1e-300 recN L May be involved in recombinational repair of damaged DNA
CLDFGBKD_02517 4.3e-178 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CLDFGBKD_02518 7.6e-94
CLDFGBKD_02519 7.5e-138 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
CLDFGBKD_02521 8.1e-196 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
CLDFGBKD_02522 7.2e-135 L Tetratricopeptide repeat
CLDFGBKD_02523 7.5e-255 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CLDFGBKD_02524 1.4e-136 S Putative ABC-transporter type IV
CLDFGBKD_02525 2.6e-97 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
CLDFGBKD_02526 7.3e-56 M1-798 P Rhodanese Homology Domain
CLDFGBKD_02527 6e-146 moeB 2.7.7.80 H ThiF family
CLDFGBKD_02528 2.3e-156 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
CLDFGBKD_02529 2.1e-28 thiS 2.8.1.10 H ThiS family
CLDFGBKD_02530 2.3e-281 argH 4.3.2.1 E argininosuccinate lyase
CLDFGBKD_02531 4.6e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
CLDFGBKD_02532 5.9e-83 argR K Regulates arginine biosynthesis genes
CLDFGBKD_02533 8.6e-184 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CLDFGBKD_02534 1.5e-247 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
CLDFGBKD_02535 6.5e-176 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
CLDFGBKD_02536 3.7e-213 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
CLDFGBKD_02537 1.4e-201 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CLDFGBKD_02538 6.5e-93
CLDFGBKD_02539 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
CLDFGBKD_02540 5.5e-200 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CLDFGBKD_02541 4.3e-158 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CLDFGBKD_02542 9.4e-147 cbiQ P Cobalt transport protein
CLDFGBKD_02543 1.4e-273 ykoD P ATPases associated with a variety of cellular activities
CLDFGBKD_02544 3.1e-107 ykoE S ABC-type cobalt transport system, permease component
CLDFGBKD_02545 9e-15 argE E Peptidase dimerisation domain
CLDFGBKD_02546 5.7e-258 argE E Peptidase dimerisation domain
CLDFGBKD_02547 1.2e-106 S Protein of unknown function (DUF3043)
CLDFGBKD_02548 8.4e-279 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CLDFGBKD_02549 4.7e-140 S Domain of unknown function (DUF4191)
CLDFGBKD_02550 1.3e-281 glnA 6.3.1.2 E glutamine synthetase
CLDFGBKD_02551 3.6e-34 uidA 3.2.1.31 G Glycosyl hydrolases family 2, TIM barrel domain
CLDFGBKD_02552 1.2e-173 S Membrane transport protein
CLDFGBKD_02553 1.1e-42 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
CLDFGBKD_02554 1.2e-16 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
CLDFGBKD_02555 1.1e-84 laaE K Transcriptional regulator PadR-like family
CLDFGBKD_02556 1.5e-116 magIII L endonuclease III
CLDFGBKD_02557 9.7e-242 vbsD V MatE
CLDFGBKD_02558 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CLDFGBKD_02559 0.0 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
CLDFGBKD_02560 1.3e-59 K LysR substrate binding domain
CLDFGBKD_02561 1.1e-15 lacA 2.3.1.18, 2.3.1.79 S maltose O-acetyltransferase
CLDFGBKD_02562 2.2e-211 bglA 3.2.1.21 G Glycosyl hydrolase family 1
CLDFGBKD_02563 1.6e-146 E GDSL-like Lipase/Acylhydrolase family
CLDFGBKD_02564 6e-173 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
CLDFGBKD_02565 5.7e-116 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLDFGBKD_02566 0.0 E Sodium:solute symporter family
CLDFGBKD_02567 6.8e-43
CLDFGBKD_02568 2.8e-89 G transmembrane transporter activity
CLDFGBKD_02569 2.5e-32 truD 5.4.99.27 J tRNA pseudouridine synthase D (TruD)
CLDFGBKD_02570 1.6e-207 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CLDFGBKD_02571 1e-132 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
CLDFGBKD_02572 8.5e-182 opcA G Glucose-6-phosphate dehydrogenase subunit
CLDFGBKD_02573 3e-300 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CLDFGBKD_02575 2.6e-39
CLDFGBKD_02576 1.5e-64
CLDFGBKD_02579 1.1e-26 yopT S Fic/DOC family
CLDFGBKD_02580 5e-111 D ftsk spoiiie
CLDFGBKD_02583 1.7e-76 L A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CLDFGBKD_02585 1.9e-18 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
CLDFGBKD_02590 6.6e-21 xerH L Phage integrase family
CLDFGBKD_02591 4.8e-11 2.7.11.1 S HipA-like C-terminal domain
CLDFGBKD_02594 9.3e-56 S Fic/DOC family
CLDFGBKD_02596 1.4e-20
CLDFGBKD_02598 1e-69
CLDFGBKD_02599 1.4e-174 L Transposase and inactivated derivatives IS30 family
CLDFGBKD_02600 1.6e-09
CLDFGBKD_02601 2.3e-43 yxaM EGP Major Facilitator Superfamily
CLDFGBKD_02602 2.6e-31 L Transposase
CLDFGBKD_02604 5.1e-75 S Psort location Cytoplasmic, score
CLDFGBKD_02605 2.2e-24 D COG COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
CLDFGBKD_02607 1.3e-31 S Unextendable partial coding region

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)