ORF_ID e_value Gene_name EC_number CAZy COGs Description
GDDOIJFM_00001 1.1e-44 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
GDDOIJFM_00002 8.8e-244 hsdM 2.1.1.72 V HsdM N-terminal domain
GDDOIJFM_00003 0.0 hsdR 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
GDDOIJFM_00005 1.4e-158 I type I phosphodiesterase nucleotide pyrophosphatase
GDDOIJFM_00006 1.1e-201 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
GDDOIJFM_00007 2.2e-160 U Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00008 4.4e-150 U Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00009 1.3e-199 P Bacterial extracellular solute-binding protein
GDDOIJFM_00010 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GDDOIJFM_00011 1.3e-152 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GDDOIJFM_00012 2.3e-161 dcuD C C4-dicarboxylate anaerobic carrier
GDDOIJFM_00013 2.6e-105 rihB 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
GDDOIJFM_00014 2.4e-43 K acetyltransferase
GDDOIJFM_00015 7.9e-127 rbsR K helix_turn _helix lactose operon repressor
GDDOIJFM_00016 0.0 V ABC transporter transmembrane region
GDDOIJFM_00017 0.0 V ABC transporter, ATP-binding protein
GDDOIJFM_00018 5.2e-90 K MarR family
GDDOIJFM_00019 0.0 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
GDDOIJFM_00020 1.5e-85 K Bacterial regulatory proteins, tetR family
GDDOIJFM_00021 4.9e-211 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
GDDOIJFM_00022 2.6e-70 S Nucleotidyltransferase substrate binding protein like
GDDOIJFM_00023 1.2e-45 S Nucleotidyltransferase domain
GDDOIJFM_00025 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
GDDOIJFM_00026 2.1e-142 K Bacterial regulatory proteins, tetR family
GDDOIJFM_00027 5.5e-255 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
GDDOIJFM_00028 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
GDDOIJFM_00029 6.5e-136 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GDDOIJFM_00030 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
GDDOIJFM_00031 6.3e-257 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GDDOIJFM_00032 2.4e-41 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GDDOIJFM_00033 1.5e-90 ywrO 1.6.5.2 S Flavodoxin-like fold
GDDOIJFM_00034 0.0 fadD 6.2.1.3 I AMP-binding enzyme
GDDOIJFM_00035 3.2e-65 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GDDOIJFM_00036 3.7e-78 F Nucleoside 2-deoxyribosyltransferase
GDDOIJFM_00038 1.6e-192 S Endonuclease/Exonuclease/phosphatase family
GDDOIJFM_00039 2.9e-179 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
GDDOIJFM_00040 3e-234 aspB E Aminotransferase class-V
GDDOIJFM_00041 2.2e-201 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
GDDOIJFM_00042 2.2e-87 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
GDDOIJFM_00043 1.2e-100 XK27_03610 K Acetyltransferase (GNAT) domain
GDDOIJFM_00044 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
GDDOIJFM_00045 4e-147 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
GDDOIJFM_00046 9.2e-250 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
GDDOIJFM_00047 6e-151 map 3.4.11.18 E Methionine aminopeptidase
GDDOIJFM_00048 1.1e-140 S Short repeat of unknown function (DUF308)
GDDOIJFM_00049 0.0 pepO 3.4.24.71 O Peptidase family M13
GDDOIJFM_00050 5.9e-115 L Single-strand binding protein family
GDDOIJFM_00051 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
GDDOIJFM_00052 1.7e-156 pflA 1.97.1.4 O Radical SAM superfamily
GDDOIJFM_00053 1.3e-268 recD2 3.6.4.12 L PIF1-like helicase
GDDOIJFM_00054 4.8e-122 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
GDDOIJFM_00055 4.8e-293 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
GDDOIJFM_00056 3e-213 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
GDDOIJFM_00057 1.5e-118 ywlC 2.7.7.87 J Belongs to the SUA5 family
GDDOIJFM_00058 6.6e-125 livF E ATPases associated with a variety of cellular activities
GDDOIJFM_00059 1.4e-161 E Branched-chain amino acid ATP-binding cassette transporter
GDDOIJFM_00060 7.7e-189 livM U Belongs to the binding-protein-dependent transport system permease family
GDDOIJFM_00061 5.4e-111 U Belongs to the binding-protein-dependent transport system permease family
GDDOIJFM_00062 1.8e-207 livK E Receptor family ligand binding region
GDDOIJFM_00063 8.2e-165 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
GDDOIJFM_00064 3.7e-191 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GDDOIJFM_00065 1.3e-36 rpmE J Binds the 23S rRNA
GDDOIJFM_00067 4.4e-101 yebQ EGP Major facilitator Superfamily
GDDOIJFM_00068 7.1e-152
GDDOIJFM_00069 3.5e-73 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
GDDOIJFM_00070 1.4e-166 dkgB S Oxidoreductase, aldo keto reductase family protein
GDDOIJFM_00071 1.5e-18 lmrB U Major Facilitator Superfamily
GDDOIJFM_00072 4.8e-88 K Winged helix DNA-binding domain
GDDOIJFM_00073 1.1e-175 glkA 2.7.1.2 G ROK family
GDDOIJFM_00075 7.7e-308 EGP Major Facilitator Superfamily
GDDOIJFM_00076 0.0 yjjK S ATP-binding cassette protein, ChvD family
GDDOIJFM_00077 2.5e-169 tesB I Thioesterase-like superfamily
GDDOIJFM_00078 3.5e-86 S Protein of unknown function (DUF3180)
GDDOIJFM_00079 6.5e-226 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
GDDOIJFM_00080 4.2e-161 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
GDDOIJFM_00081 2.8e-117 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
GDDOIJFM_00082 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GDDOIJFM_00083 2.7e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
GDDOIJFM_00084 1.5e-211 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
GDDOIJFM_00085 2.4e-249 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
GDDOIJFM_00086 4.8e-299
GDDOIJFM_00087 4.5e-189 natA V ATPases associated with a variety of cellular activities
GDDOIJFM_00088 4.7e-235 epsG M Glycosyl transferase family 21
GDDOIJFM_00089 7.3e-281 S AI-2E family transporter
GDDOIJFM_00090 2.3e-178 3.4.14.13 M Glycosyltransferase like family 2
GDDOIJFM_00091 5.2e-204 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
GDDOIJFM_00092 4e-261 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
GDDOIJFM_00095 2.9e-160 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
GDDOIJFM_00097 1.2e-15 L Phage integrase family
GDDOIJFM_00098 4.3e-267 lacS G Psort location CytoplasmicMembrane, score 10.00
GDDOIJFM_00099 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GDDOIJFM_00100 4.8e-185 lacR K Transcriptional regulator, LacI family
GDDOIJFM_00101 1.4e-21 L Helix-turn-helix domain
GDDOIJFM_00102 4e-248 G Bacterial extracellular solute-binding protein
GDDOIJFM_00103 4.5e-219 GK ROK family
GDDOIJFM_00104 2.5e-15 U Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00105 0.0 G Glycosyl hydrolase family 20, domain 2
GDDOIJFM_00106 6.7e-08 L HTH-like domain
GDDOIJFM_00107 2.3e-219 vex3 V ABC transporter permease
GDDOIJFM_00108 2.5e-212 vex1 V Efflux ABC transporter, permease protein
GDDOIJFM_00109 6.4e-111 vex2 V ABC transporter, ATP-binding protein
GDDOIJFM_00110 1.4e-11 azlC E AzlC protein
GDDOIJFM_00111 1.5e-97 ptpA 3.1.3.48 T low molecular weight
GDDOIJFM_00112 4.6e-128 folA 1.5.1.3 H dihydrofolate reductase
GDDOIJFM_00113 1e-167 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GDDOIJFM_00114 3.4e-73 attW O OsmC-like protein
GDDOIJFM_00115 3.5e-07 attW O OsmC-like protein
GDDOIJFM_00116 5.6e-189 T Universal stress protein family
GDDOIJFM_00117 3.1e-101 M NlpC/P60 family
GDDOIJFM_00118 2.9e-99 M NlpC/P60 family
GDDOIJFM_00119 1.7e-168 usp 3.5.1.28 CBM50 S CHAP domain
GDDOIJFM_00120 5e-215 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
GDDOIJFM_00121 1.8e-32
GDDOIJFM_00122 5.1e-173 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GDDOIJFM_00123 5.4e-116 phoU P Plays a role in the regulation of phosphate uptake
GDDOIJFM_00124 4.4e-138 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GDDOIJFM_00125 9.5e-175 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
GDDOIJFM_00126 2.3e-311 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
GDDOIJFM_00128 1.3e-218 araJ EGP Major facilitator Superfamily
GDDOIJFM_00129 0.0 S Domain of unknown function (DUF4037)
GDDOIJFM_00130 1.5e-115 S Protein of unknown function (DUF4125)
GDDOIJFM_00131 0.0 S alpha beta
GDDOIJFM_00132 9.9e-68
GDDOIJFM_00133 1.1e-290 pspC KT PspC domain
GDDOIJFM_00134 1.2e-236 tcsS3 KT PspC domain
GDDOIJFM_00135 2.9e-117 degU K helix_turn_helix, Lux Regulon
GDDOIJFM_00136 4.1e-168 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
GDDOIJFM_00137 8.3e-204 mdsC 2.7.1.162, 2.7.1.39 S Phosphotransferase enzyme family
GDDOIJFM_00138 0.0 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
GDDOIJFM_00139 2.5e-167 G ABC transporter permease
GDDOIJFM_00140 6.9e-173 malC G Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00141 3e-248 G Bacterial extracellular solute-binding protein
GDDOIJFM_00143 1.1e-242 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GDDOIJFM_00144 7.5e-182 I Diacylglycerol kinase catalytic domain
GDDOIJFM_00145 1.3e-162 arbG K CAT RNA binding domain
GDDOIJFM_00146 0.0 crr 2.7.1.193 G pts system, glucose-specific IIABC component
GDDOIJFM_00147 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
GDDOIJFM_00148 1.4e-198 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
GDDOIJFM_00149 3.6e-73 K Transcriptional regulator
GDDOIJFM_00150 2.7e-277 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GDDOIJFM_00151 1.1e-166 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GDDOIJFM_00152 9.1e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GDDOIJFM_00154 1.6e-98
GDDOIJFM_00155 1.9e-262 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GDDOIJFM_00156 4.3e-219 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
GDDOIJFM_00157 1.9e-214 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GDDOIJFM_00158 4.8e-82 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GDDOIJFM_00159 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GDDOIJFM_00160 7.7e-186 nusA K Participates in both transcription termination and antitermination
GDDOIJFM_00161 1.8e-125
GDDOIJFM_00162 2.9e-100 K helix_turn _helix lactose operon repressor
GDDOIJFM_00164 3.6e-151 E Transglutaminase/protease-like homologues
GDDOIJFM_00165 0.0 gcs2 S A circularly permuted ATPgrasp
GDDOIJFM_00166 8.7e-170 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
GDDOIJFM_00167 4.4e-57 rplQ J Ribosomal protein L17
GDDOIJFM_00168 3.4e-183 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GDDOIJFM_00169 1.5e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GDDOIJFM_00170 9.5e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GDDOIJFM_00171 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
GDDOIJFM_00172 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GDDOIJFM_00173 2.2e-99 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
GDDOIJFM_00174 1.7e-246 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
GDDOIJFM_00175 8.1e-76 rplO J binds to the 23S rRNA
GDDOIJFM_00176 7e-26 rpmD J Ribosomal protein L30p/L7e
GDDOIJFM_00177 6.7e-96 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GDDOIJFM_00178 2.4e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GDDOIJFM_00179 5.4e-95 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GDDOIJFM_00180 5.5e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GDDOIJFM_00181 9.2e-18 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GDDOIJFM_00182 4.4e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GDDOIJFM_00183 1.3e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GDDOIJFM_00184 6.6e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GDDOIJFM_00185 6.4e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GDDOIJFM_00186 4.1e-37 rpmC J Belongs to the universal ribosomal protein uL29 family
GDDOIJFM_00187 2.2e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GDDOIJFM_00188 1.7e-100 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GDDOIJFM_00189 5.7e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GDDOIJFM_00190 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GDDOIJFM_00191 1.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GDDOIJFM_00192 7.5e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
GDDOIJFM_00193 3.1e-116 rplD J Forms part of the polypeptide exit tunnel
GDDOIJFM_00194 8.7e-116 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GDDOIJFM_00195 8e-51 rpsJ J Involved in the binding of tRNA to the ribosomes
GDDOIJFM_00196 8.2e-137 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
GDDOIJFM_00197 3.9e-146 ywiC S YwiC-like protein
GDDOIJFM_00198 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
GDDOIJFM_00199 4.1e-170 rhaR_1 K helix_turn_helix, arabinose operon control protein
GDDOIJFM_00200 1.5e-194 Z012_01000 1.1.1.14, 1.1.1.9 C Zinc-binding dehydrogenase
GDDOIJFM_00201 2.7e-196 EGP Major facilitator Superfamily
GDDOIJFM_00202 6.6e-215 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
GDDOIJFM_00203 6e-75 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GDDOIJFM_00204 2.2e-233 EGP Major facilitator Superfamily
GDDOIJFM_00205 2.3e-179 tdh 1.1.1.14 C Zinc-binding dehydrogenase
GDDOIJFM_00206 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
GDDOIJFM_00207 3.7e-82 rpsI J Belongs to the universal ribosomal protein uS9 family
GDDOIJFM_00208 3.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GDDOIJFM_00209 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
GDDOIJFM_00210 8.4e-117
GDDOIJFM_00211 3.4e-112 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
GDDOIJFM_00212 2.8e-185 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GDDOIJFM_00213 1.8e-117 M Bacterial capsule synthesis protein PGA_cap
GDDOIJFM_00214 6.3e-245 bglA 3.2.1.21 G Glycosyl hydrolase family 1
GDDOIJFM_00215 6.1e-160 U Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00216 5.5e-164 malC U Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00217 1.3e-243 malE G Bacterial extracellular solute-binding protein
GDDOIJFM_00218 1.4e-217 rbsR K helix_turn _helix lactose operon repressor
GDDOIJFM_00219 5.2e-22
GDDOIJFM_00221 1.1e-61 S EamA-like transporter family
GDDOIJFM_00222 1.5e-186 L Helix-turn-helix domain
GDDOIJFM_00223 3.5e-103 L Resolvase, N terminal domain
GDDOIJFM_00224 8.7e-21 S EamA-like transporter family
GDDOIJFM_00225 3.7e-238 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GDDOIJFM_00226 1.8e-223 dapC E Aminotransferase class I and II
GDDOIJFM_00227 2.9e-59 fdxA C 4Fe-4S binding domain
GDDOIJFM_00228 1.2e-269 E aromatic amino acid transport protein AroP K03293
GDDOIJFM_00229 7.2e-220 murB 1.3.1.98 M Cell wall formation
GDDOIJFM_00230 4.1e-25 rpmG J Ribosomal protein L33
GDDOIJFM_00234 1.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GDDOIJFM_00235 1.1e-135
GDDOIJFM_00236 2.2e-114 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
GDDOIJFM_00237 4.1e-55 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
GDDOIJFM_00238 4.3e-31 fmdB S Putative regulatory protein
GDDOIJFM_00239 6.2e-106 flgA NO SAF
GDDOIJFM_00240 4.8e-28 L Superfamily I DNA and RNA helicases and helicase subunits
GDDOIJFM_00241 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
GDDOIJFM_00242 7.8e-188 T Forkhead associated domain
GDDOIJFM_00243 9.3e-49 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
GDDOIJFM_00244 2.4e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GDDOIJFM_00245 2e-146 3.2.1.8 S alpha beta
GDDOIJFM_00246 4e-251 pbuO S Permease family
GDDOIJFM_00247 2.1e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GDDOIJFM_00248 1.3e-171 pstA P Phosphate transport system permease
GDDOIJFM_00249 1.2e-156 pstC P probably responsible for the translocation of the substrate across the membrane
GDDOIJFM_00250 1.3e-202 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
GDDOIJFM_00251 3.8e-142 KT Transcriptional regulatory protein, C terminal
GDDOIJFM_00252 1e-208 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
GDDOIJFM_00253 4.6e-241 EGP Sugar (and other) transporter
GDDOIJFM_00254 5.7e-124 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GDDOIJFM_00255 1.9e-236 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GDDOIJFM_00256 4.8e-218 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GDDOIJFM_00257 2.3e-267 pepC 3.4.22.40 E Peptidase C1-like family
GDDOIJFM_00258 5.2e-44 D nuclear chromosome segregation
GDDOIJFM_00259 1.7e-125 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GDDOIJFM_00260 2.4e-150 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
GDDOIJFM_00261 8e-199 yfiH Q Multi-copper polyphenol oxidoreductase laccase
GDDOIJFM_00262 6.6e-303 yegQ O Peptidase family U32 C-terminal domain
GDDOIJFM_00263 6.3e-179 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
GDDOIJFM_00264 5e-102 rsmD 2.1.1.171 L Conserved hypothetical protein 95
GDDOIJFM_00265 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
GDDOIJFM_00266 2.5e-29 rpmB J Ribosomal L28 family
GDDOIJFM_00267 3.2e-197 yegV G pfkB family carbohydrate kinase
GDDOIJFM_00268 1.1e-239 yxiO S Vacuole effluxer Atg22 like
GDDOIJFM_00269 7.9e-129 K helix_turn_helix, mercury resistance
GDDOIJFM_00270 6.3e-63 T Toxic component of a toxin-antitoxin (TA) module
GDDOIJFM_00271 2.4e-53 relB L RelB antitoxin
GDDOIJFM_00272 6.1e-25 yxiO G Major facilitator Superfamily
GDDOIJFM_00273 8.9e-182 K Helix-turn-helix XRE-family like proteins
GDDOIJFM_00274 8.9e-21
GDDOIJFM_00275 9.5e-115 S Alpha/beta hydrolase family
GDDOIJFM_00279 1.9e-17 EGP Major facilitator Superfamily
GDDOIJFM_00280 5e-24 XK27_04590 S NADPH-dependent FMN reductase
GDDOIJFM_00281 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
GDDOIJFM_00282 2.5e-300 pccB I Carboxyl transferase domain
GDDOIJFM_00283 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
GDDOIJFM_00284 2.6e-90 bioY S BioY family
GDDOIJFM_00285 6.5e-162 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
GDDOIJFM_00286 0.0
GDDOIJFM_00287 1.4e-164 QT PucR C-terminal helix-turn-helix domain
GDDOIJFM_00288 2.7e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
GDDOIJFM_00289 1e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GDDOIJFM_00290 9.6e-146 K Psort location Cytoplasmic, score
GDDOIJFM_00291 7e-110 nusG K Participates in transcription elongation, termination and antitermination
GDDOIJFM_00292 1.8e-31 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
GDDOIJFM_00294 1.3e-229 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
GDDOIJFM_00295 3e-221 G polysaccharide deacetylase
GDDOIJFM_00296 8.3e-199 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
GDDOIJFM_00297 2.3e-311 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GDDOIJFM_00298 5.8e-39 rpmA J Ribosomal L27 protein
GDDOIJFM_00299 1.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
GDDOIJFM_00300 0.0 rne 3.1.26.12 J Ribonuclease E/G family
GDDOIJFM_00301 3.6e-232 dapE 3.5.1.18 E Peptidase dimerisation domain
GDDOIJFM_00302 1.9e-167 mdcF S Transporter, auxin efflux carrier (AEC) family protein
GDDOIJFM_00303 5.7e-166 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
GDDOIJFM_00304 3.2e-149 S Amidohydrolase
GDDOIJFM_00305 5.4e-202 fucP G Major Facilitator Superfamily
GDDOIJFM_00306 2.8e-148 IQ KR domain
GDDOIJFM_00307 1.1e-250 4.2.1.68 M Enolase C-terminal domain-like
GDDOIJFM_00308 4.1e-192 K Bacterial regulatory proteins, lacI family
GDDOIJFM_00309 9e-254 V Efflux ABC transporter, permease protein
GDDOIJFM_00310 5.2e-139 V ATPases associated with a variety of cellular activities
GDDOIJFM_00311 1.6e-28 S Protein of unknown function (DUF1778)
GDDOIJFM_00312 2e-91 K Acetyltransferase (GNAT) family
GDDOIJFM_00313 9.3e-283 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
GDDOIJFM_00314 1.7e-207 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
GDDOIJFM_00315 2.8e-238 hom 1.1.1.3 E Homoserine dehydrogenase
GDDOIJFM_00316 5.6e-54 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
GDDOIJFM_00317 3e-55 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GDDOIJFM_00318 2.4e-303 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
GDDOIJFM_00319 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
GDDOIJFM_00320 8.1e-131 K Bacterial regulatory proteins, tetR family
GDDOIJFM_00321 8e-222 G Transmembrane secretion effector
GDDOIJFM_00322 6.8e-256 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GDDOIJFM_00323 5.3e-256 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
GDDOIJFM_00324 2.3e-156 ET Bacterial periplasmic substrate-binding proteins
GDDOIJFM_00325 3.7e-120 ytmL P Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00326 1.2e-138 P Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00327 3.5e-105 S L-2-amino-thiazoline-4-carboxylic acid hydrolase
GDDOIJFM_00328 1.3e-131 yxeO 3.6.3.21 E ATPases associated with a variety of cellular activities
GDDOIJFM_00329 5.3e-220 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
GDDOIJFM_00330 3.7e-21 2.7.13.3 T Histidine kinase
GDDOIJFM_00331 8.4e-20 S Bacterial PH domain
GDDOIJFM_00332 3.2e-132 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
GDDOIJFM_00333 6.5e-273 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
GDDOIJFM_00334 4.1e-139 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
GDDOIJFM_00335 7.6e-263 S Calcineurin-like phosphoesterase
GDDOIJFM_00336 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
GDDOIJFM_00337 5e-233 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
GDDOIJFM_00338 8.5e-132
GDDOIJFM_00339 0.0 G N-terminal domain of (some) glycogen debranching enzymes
GDDOIJFM_00340 9.1e-140 P Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00341 4.4e-209 U Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00342 1.9e-207 G Bacterial extracellular solute-binding protein
GDDOIJFM_00343 7.2e-128 K helix_turn _helix lactose operon repressor
GDDOIJFM_00344 3.9e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GDDOIJFM_00345 2.8e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GDDOIJFM_00346 1.7e-215 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
GDDOIJFM_00347 1e-217 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
GDDOIJFM_00349 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GDDOIJFM_00350 2.3e-162 S Auxin Efflux Carrier
GDDOIJFM_00351 5.8e-157 fahA Q Fumarylacetoacetate (FAA) hydrolase family
GDDOIJFM_00352 1.2e-116 S Domain of unknown function (DUF4190)
GDDOIJFM_00353 7.9e-163
GDDOIJFM_00354 1.6e-235 glf 5.4.99.9 M UDP-galactopyranose mutase
GDDOIJFM_00355 4.8e-64 K Helix-turn-helix domain
GDDOIJFM_00357 4.2e-45 5.3.1.27 G sugar phosphate isomerase involved in capsule formation
GDDOIJFM_00358 2e-59 G Branched-chain amino acid transport system / permease component
GDDOIJFM_00359 2.9e-73 P branched-chain amino acid ABC transporter, permease protein
GDDOIJFM_00360 6.3e-120 G ATPases associated with a variety of cellular activities
GDDOIJFM_00361 1.3e-81 G ABC-type sugar transport system periplasmic component
GDDOIJFM_00362 8.6e-167 xylB 1.1.1.57, 2.7.1.17 G Belongs to the FGGY kinase family
GDDOIJFM_00363 2.3e-75 xylR GK ROK family
GDDOIJFM_00364 8.7e-37
GDDOIJFM_00365 3.8e-201 M Glycosyltransferase like family 2
GDDOIJFM_00366 7.8e-183 S Predicted membrane protein (DUF2142)
GDDOIJFM_00367 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
GDDOIJFM_00368 0.0 GT2,GT4 M Glycosyl transferase family 2
GDDOIJFM_00369 1.1e-164 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
GDDOIJFM_00370 1.4e-118 rgpC U Transport permease protein
GDDOIJFM_00371 7.2e-169 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
GDDOIJFM_00372 2.4e-286 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
GDDOIJFM_00373 5.5e-205 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
GDDOIJFM_00374 0.0
GDDOIJFM_00375 3.3e-167 rfbJ M Glycosyl transferase family 2
GDDOIJFM_00376 4.8e-22 M nuclease
GDDOIJFM_00377 2.9e-67 M L,D-transpeptidase catalytic domain
GDDOIJFM_00378 6.7e-166 lytC 3.1.4.46, 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
GDDOIJFM_00379 3.8e-225 K Cell envelope-related transcriptional attenuator domain
GDDOIJFM_00380 7.5e-256 V ABC transporter permease
GDDOIJFM_00381 8.1e-184 V ABC transporter
GDDOIJFM_00382 9.9e-143 T HD domain
GDDOIJFM_00383 5.5e-161 S Glutamine amidotransferase domain
GDDOIJFM_00384 0.0 kup P Transport of potassium into the cell
GDDOIJFM_00385 9.1e-186 tatD L TatD related DNase
GDDOIJFM_00386 0.0 yknV V ABC transporter
GDDOIJFM_00387 0.0 mdlA2 V ABC transporter
GDDOIJFM_00388 2.3e-23 S ATPase domain predominantly from Archaea
GDDOIJFM_00389 2e-252 S Domain of unknown function (DUF4143)
GDDOIJFM_00390 1.1e-42 G Glycosyl hydrolases family 43
GDDOIJFM_00391 2.3e-69 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
GDDOIJFM_00392 2.5e-65 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
GDDOIJFM_00393 2.5e-85 pepC 3.4.22.40 E Peptidase C1-like family
GDDOIJFM_00394 1.5e-46
GDDOIJFM_00395 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GDDOIJFM_00396 2.3e-119
GDDOIJFM_00397 3.1e-184 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GDDOIJFM_00399 2.3e-257 G MFS/sugar transport protein
GDDOIJFM_00400 2.3e-181 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GDDOIJFM_00401 0.0 lmrA2 V ABC transporter transmembrane region
GDDOIJFM_00402 0.0 lmrA1 V ABC transporter, ATP-binding protein
GDDOIJFM_00403 3.9e-90 ydgJ K helix_turn_helix multiple antibiotic resistance protein
GDDOIJFM_00404 2.2e-279 cycA E Amino acid permease
GDDOIJFM_00405 0.0 V FtsX-like permease family
GDDOIJFM_00406 7.5e-129 V ABC transporter
GDDOIJFM_00407 2.3e-268 aroP E aromatic amino acid transport protein AroP K03293
GDDOIJFM_00408 1.7e-105 S Protein of unknown function, DUF624
GDDOIJFM_00409 6.8e-153 rafG G ABC transporter permease
GDDOIJFM_00410 4.4e-147 malC G Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00411 1.4e-184 K Psort location Cytoplasmic, score
GDDOIJFM_00412 4.5e-252 amyE G Bacterial extracellular solute-binding protein
GDDOIJFM_00413 3.6e-102 G Phosphoglycerate mutase family
GDDOIJFM_00414 4.4e-59 S Protein of unknown function (DUF4235)
GDDOIJFM_00415 4.2e-141 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
GDDOIJFM_00416 0.0 pip S YhgE Pip domain protein
GDDOIJFM_00417 7e-280 pip S YhgE Pip domain protein
GDDOIJFM_00418 1.8e-40
GDDOIJFM_00419 2.6e-36 L Integrase core domain
GDDOIJFM_00420 5.1e-79 L IstB-like ATP binding protein
GDDOIJFM_00421 2.2e-284 L PFAM Integrase catalytic
GDDOIJFM_00422 5.4e-97
GDDOIJFM_00423 2.9e-101
GDDOIJFM_00424 9.6e-95
GDDOIJFM_00425 1.1e-82 U Relaxase/Mobilisation nuclease domain
GDDOIJFM_00426 1.1e-63 K Helix-turn-helix XRE-family like proteins
GDDOIJFM_00427 1.3e-301 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
GDDOIJFM_00428 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
GDDOIJFM_00429 3e-262 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GDDOIJFM_00430 2.5e-65 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
GDDOIJFM_00431 2.7e-134 3.1.3.85 G Phosphoglycerate mutase family
GDDOIJFM_00435 1.3e-154 S Sucrose-6F-phosphate phosphohydrolase
GDDOIJFM_00436 1.8e-176 metQ P NLPA lipoprotein
GDDOIJFM_00437 1.4e-220 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GDDOIJFM_00438 9.6e-113 metI P Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00439 3.7e-226 S Peptidase dimerisation domain
GDDOIJFM_00440 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GDDOIJFM_00441 2.6e-38
GDDOIJFM_00442 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
GDDOIJFM_00443 8.7e-175 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GDDOIJFM_00444 3.7e-119 S Protein of unknown function (DUF3000)
GDDOIJFM_00445 2.6e-252 rnd 3.1.13.5 J 3'-5' exonuclease
GDDOIJFM_00446 4.4e-234 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
GDDOIJFM_00447 6.3e-244 clcA_2 P Voltage gated chloride channel
GDDOIJFM_00448 2e-59
GDDOIJFM_00449 6.5e-116 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GDDOIJFM_00450 7.3e-121 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GDDOIJFM_00451 3.3e-250 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GDDOIJFM_00454 1.3e-242 patB 4.4.1.8 E Aminotransferase, class I II
GDDOIJFM_00455 1.1e-237 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
GDDOIJFM_00456 1.6e-168 fmt2 3.2.2.10 S Belongs to the LOG family
GDDOIJFM_00457 1.9e-113 safC S O-methyltransferase
GDDOIJFM_00458 4.2e-183 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
GDDOIJFM_00459 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
GDDOIJFM_00460 0.0 dprA 5.99.1.2 LU DNA recombination-mediator protein A
GDDOIJFM_00461 6.8e-292 comM O Magnesium chelatase, subunit ChlI C-terminal
GDDOIJFM_00462 2.2e-75 yraN L Belongs to the UPF0102 family
GDDOIJFM_00463 1.6e-23 L Transposase and inactivated derivatives IS30 family
GDDOIJFM_00464 2.8e-165 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
GDDOIJFM_00465 1.7e-251 metY 2.5.1.49 E Aminotransferase class-V
GDDOIJFM_00466 1.7e-165 V ABC transporter, ATP-binding protein
GDDOIJFM_00467 0.0 MV MacB-like periplasmic core domain
GDDOIJFM_00468 3.2e-139 K helix_turn_helix, Lux Regulon
GDDOIJFM_00469 0.0 tcsS2 T Histidine kinase
GDDOIJFM_00470 4.1e-294 pip 3.4.11.5 S alpha/beta hydrolase fold
GDDOIJFM_00471 1.4e-147 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GDDOIJFM_00472 8.1e-154 cjaA ET Bacterial periplasmic substrate-binding proteins
GDDOIJFM_00473 2.6e-138 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
GDDOIJFM_00474 1.2e-118 E Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00475 6.7e-111 papP E Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00476 2.4e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
GDDOIJFM_00477 1.4e-164 K Arac family
GDDOIJFM_00478 2.7e-28 S rRNA binding
GDDOIJFM_00480 2.7e-247 V MatE
GDDOIJFM_00481 0.0 drrC L ABC transporter
GDDOIJFM_00482 1.6e-14 2.7.7.7 L Transposase, Mutator family
GDDOIJFM_00483 2.4e-234 XK27_00240 K Fic/DOC family
GDDOIJFM_00484 9.1e-60 yccF S Inner membrane component domain
GDDOIJFM_00485 1.3e-159 ksgA 2.1.1.182 J Methyltransferase domain
GDDOIJFM_00486 2.5e-67 S Cupin 2, conserved barrel domain protein
GDDOIJFM_00487 1.5e-52 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
GDDOIJFM_00488 1.1e-37 L RelB antitoxin
GDDOIJFM_00489 3.3e-244 S HipA-like C-terminal domain
GDDOIJFM_00490 1.1e-32 K addiction module antidote protein HigA
GDDOIJFM_00491 8.9e-221 G Transmembrane secretion effector
GDDOIJFM_00492 3.5e-118 K Bacterial regulatory proteins, tetR family
GDDOIJFM_00493 2.2e-11
GDDOIJFM_00494 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
GDDOIJFM_00495 1.2e-13 EGP Transmembrane secretion effector
GDDOIJFM_00496 4e-09 K helix_turn_helix, Lux Regulon
GDDOIJFM_00497 4.5e-20 2.7.13.3 T Histidine kinase
GDDOIJFM_00498 1.1e-193 2.7.13.3 T Histidine kinase
GDDOIJFM_00499 5.3e-127 K helix_turn_helix, Lux Regulon
GDDOIJFM_00500 3e-95
GDDOIJFM_00501 1.4e-143 M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GDDOIJFM_00502 1.4e-124 lolD Q ATPases associated with a variety of cellular activities
GDDOIJFM_00503 2.7e-176 V MacB-like periplasmic core domain
GDDOIJFM_00504 3.2e-40 relB L RelB antitoxin
GDDOIJFM_00505 3.2e-49 S Bacterial toxin of type II toxin-antitoxin system, YafQ
GDDOIJFM_00506 2.3e-93 rpoE4 K Sigma-70 region 2
GDDOIJFM_00507 9.4e-22 S Psort location CytoplasmicMembrane, score
GDDOIJFM_00508 2.1e-106
GDDOIJFM_00509 3.6e-132
GDDOIJFM_00510 3.8e-162 yfiL V ATPases associated with a variety of cellular activities
GDDOIJFM_00511 2e-70
GDDOIJFM_00512 9.1e-62
GDDOIJFM_00513 4.5e-147 S EamA-like transporter family
GDDOIJFM_00514 1.4e-99
GDDOIJFM_00515 5e-128
GDDOIJFM_00516 4.1e-121 V ATPases associated with a variety of cellular activities
GDDOIJFM_00517 2e-109 L Transposase and inactivated derivatives IS30 family
GDDOIJFM_00518 7.2e-89 L Transposase and inactivated derivatives IS30 family
GDDOIJFM_00519 8.8e-119 K Bacterial regulatory proteins, luxR family
GDDOIJFM_00520 2.8e-224 T Histidine kinase
GDDOIJFM_00521 3.2e-251 V Efflux ABC transporter, permease protein
GDDOIJFM_00522 2.3e-162 V ABC transporter
GDDOIJFM_00524 7.4e-49 S Protein of unknown function (DUF2089)
GDDOIJFM_00525 1.3e-52
GDDOIJFM_00526 5.5e-71 K Transcriptional regulator
GDDOIJFM_00527 3.2e-110
GDDOIJFM_00528 3.7e-45 K sequence-specific DNA binding
GDDOIJFM_00529 8.3e-34 hipA 2.7.11.1 S kinase activity
GDDOIJFM_00530 4.4e-42 2.6.1.76 EGP Major Facilitator Superfamily
GDDOIJFM_00531 6.3e-20 G Major facilitator Superfamily
GDDOIJFM_00532 1.4e-295 mmuP E amino acid
GDDOIJFM_00534 1e-62 yeaO K Protein of unknown function, DUF488
GDDOIJFM_00535 5e-75
GDDOIJFM_00536 5e-174 3.6.4.12
GDDOIJFM_00537 2.2e-92 yijF S Domain of unknown function (DUF1287)
GDDOIJFM_00538 5.4e-297 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
GDDOIJFM_00539 5.3e-71 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
GDDOIJFM_00540 6.1e-140 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
GDDOIJFM_00541 3.6e-76 3.5.1.124 S DJ-1/PfpI family
GDDOIJFM_00542 2.7e-224 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
GDDOIJFM_00543 3.7e-174 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
GDDOIJFM_00544 2.6e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
GDDOIJFM_00545 2.8e-134 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
GDDOIJFM_00546 3.1e-145 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GDDOIJFM_00547 5.8e-144 rpsB J Belongs to the universal ribosomal protein uS2 family
GDDOIJFM_00548 2.2e-87 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GDDOIJFM_00549 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
GDDOIJFM_00550 3.3e-91
GDDOIJFM_00551 1.5e-208 guaB 1.1.1.205 F IMP dehydrogenase family protein
GDDOIJFM_00552 2.3e-242 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
GDDOIJFM_00553 2e-257 G ABC transporter substrate-binding protein
GDDOIJFM_00554 4e-86 M Peptidase family M23
GDDOIJFM_00556 5.4e-34 xerH L Phage integrase family
GDDOIJFM_00557 3.4e-20 2.7.11.1 S HipA-like C-terminal domain
GDDOIJFM_00558 3.7e-145 S Fic/DOC family
GDDOIJFM_00559 1.7e-56 L PFAM Relaxase mobilization nuclease family protein
GDDOIJFM_00560 7.4e-200 V AAA domain, putative AbiEii toxin, Type IV TA system
GDDOIJFM_00561 1.9e-142 S ABC-2 family transporter protein
GDDOIJFM_00562 8.9e-140
GDDOIJFM_00563 6.7e-60
GDDOIJFM_00565 3.3e-239 T Histidine kinase
GDDOIJFM_00566 3.6e-120 K helix_turn_helix, Lux Regulon
GDDOIJFM_00568 1.2e-194 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GDDOIJFM_00569 3.8e-105 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
GDDOIJFM_00570 1e-159 yeaZ 2.3.1.234 O Glycoprotease family
GDDOIJFM_00571 3.4e-87 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
GDDOIJFM_00572 9e-173 holA 2.7.7.7 L DNA polymerase III delta subunit
GDDOIJFM_00573 1.7e-307 comE S Competence protein
GDDOIJFM_00574 1.6e-44 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
GDDOIJFM_00575 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
GDDOIJFM_00576 1.6e-160 ET Bacterial periplasmic substrate-binding proteins
GDDOIJFM_00577 5.3e-170 corA P CorA-like Mg2+ transporter protein
GDDOIJFM_00578 5.4e-166 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
GDDOIJFM_00579 2.7e-233 L ribosomal rna small subunit methyltransferase
GDDOIJFM_00580 2e-70 pdxH S Pfam:Pyridox_oxidase
GDDOIJFM_00581 1.8e-170 EG EamA-like transporter family
GDDOIJFM_00582 2.1e-131 C Putative TM nitroreductase
GDDOIJFM_00583 8.5e-32
GDDOIJFM_00585 3.3e-255 S Metal-independent alpha-mannosidase (GH125)
GDDOIJFM_00586 2e-238 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
GDDOIJFM_00589 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GDDOIJFM_00590 6.9e-112 hit 2.7.7.53 FG HIT domain
GDDOIJFM_00591 2e-111 yebC K transcriptional regulatory protein
GDDOIJFM_00592 2.7e-100 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
GDDOIJFM_00593 3e-105 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
GDDOIJFM_00594 4.7e-199 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
GDDOIJFM_00595 3.6e-52 yajC U Preprotein translocase subunit
GDDOIJFM_00596 1e-99 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GDDOIJFM_00597 1.2e-222 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
GDDOIJFM_00598 9.3e-164 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
GDDOIJFM_00599 2.1e-233
GDDOIJFM_00600 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
GDDOIJFM_00601 1.3e-32
GDDOIJFM_00602 2.9e-120 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GDDOIJFM_00603 1e-142 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GDDOIJFM_00604 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
GDDOIJFM_00606 2.5e-163 supH S Sucrose-6F-phosphate phosphohydrolase
GDDOIJFM_00607 2.5e-291 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
GDDOIJFM_00608 0.0 pafB K WYL domain
GDDOIJFM_00609 6.8e-53
GDDOIJFM_00610 0.0 helY L DEAD DEAH box helicase
GDDOIJFM_00611 5.1e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
GDDOIJFM_00612 5.7e-140 pgp 3.1.3.18 S HAD-hyrolase-like
GDDOIJFM_00613 2e-35
GDDOIJFM_00614 2.4e-63
GDDOIJFM_00615 2.6e-112 K helix_turn_helix, mercury resistance
GDDOIJFM_00616 6.7e-75 garA T Inner membrane component of T3SS, cytoplasmic domain
GDDOIJFM_00617 5.9e-141 S Bacterial protein of unknown function (DUF881)
GDDOIJFM_00618 3.9e-35 sbp S Protein of unknown function (DUF1290)
GDDOIJFM_00619 1.7e-171 S Bacterial protein of unknown function (DUF881)
GDDOIJFM_00620 3e-105 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GDDOIJFM_00621 8.7e-156 hisG 2.4.2.17 F ATP phosphoribosyltransferase
GDDOIJFM_00622 9.9e-42 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
GDDOIJFM_00623 7.9e-112 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
GDDOIJFM_00624 9.1e-186 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GDDOIJFM_00625 3.2e-161 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
GDDOIJFM_00626 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
GDDOIJFM_00627 1.6e-131 S SOS response associated peptidase (SRAP)
GDDOIJFM_00628 1.4e-156 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
GDDOIJFM_00629 1.8e-259 mmuP E amino acid
GDDOIJFM_00630 6e-188 V VanZ like family
GDDOIJFM_00631 1.6e-66 cefD 5.1.1.17 E Aminotransferase, class V
GDDOIJFM_00632 3.3e-100 S Acetyltransferase (GNAT) domain
GDDOIJFM_00633 1.5e-50
GDDOIJFM_00634 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GDDOIJFM_00635 8.8e-190 K helix_turn _helix lactose operon repressor
GDDOIJFM_00636 3.8e-88 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
GDDOIJFM_00637 4.9e-142 L Protein of unknown function (DUF1524)
GDDOIJFM_00638 4.6e-236 mntH P H( )-stimulated, divalent metal cation uptake system
GDDOIJFM_00639 2.7e-283 EGP Major facilitator Superfamily
GDDOIJFM_00640 7.7e-311 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
GDDOIJFM_00641 5.1e-235 rfbP 2.7.8.6 M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
GDDOIJFM_00642 6.3e-108 3.1.3.48 T Low molecular weight phosphatase family
GDDOIJFM_00643 4.6e-114 S Psort location CytoplasmicMembrane, score 9.99
GDDOIJFM_00645 9.5e-187 L Transposase and inactivated derivatives IS30 family
GDDOIJFM_00646 2e-139 M Psort location Cytoplasmic, score 8.87
GDDOIJFM_00647 1.7e-52 GT4 M Psort location Cytoplasmic, score 8.87
GDDOIJFM_00648 1.2e-07
GDDOIJFM_00649 8.9e-63 C Polysaccharide pyruvyl transferase
GDDOIJFM_00650 2.9e-119 S Psort location CytoplasmicMembrane, score 9.99
GDDOIJFM_00651 1.3e-46 M Glycosyltransferase like family 2
GDDOIJFM_00652 1.2e-178 menD 2.2.1.9 H Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
GDDOIJFM_00653 1e-51 S Appr-1'-p processing enzyme
GDDOIJFM_00654 6e-74 S von Willebrand factor (vWF) type A domain
GDDOIJFM_00655 6e-85 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GDDOIJFM_00656 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
GDDOIJFM_00657 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
GDDOIJFM_00658 1.4e-175 srrA1 G Bacterial extracellular solute-binding protein
GDDOIJFM_00659 1.3e-123 G Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00660 5.9e-125 lacG G Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00661 1.8e-221 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
GDDOIJFM_00662 4.2e-139 K helix_turn _helix lactose operon repressor
GDDOIJFM_00663 9.2e-10
GDDOIJFM_00664 4.9e-142 cobB2 K Sir2 family
GDDOIJFM_00665 5.5e-231 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
GDDOIJFM_00666 1.6e-214 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
GDDOIJFM_00667 4e-93 pptA 6.3.2.14 Q 4'-phosphopantetheinyl transferase superfamily
GDDOIJFM_00668 1.9e-115 K WHG domain
GDDOIJFM_00669 2.4e-49 H Beta-ketoacyl synthase, C-terminal domain
GDDOIJFM_00670 4.5e-267 EGP Major Facilitator Superfamily
GDDOIJFM_00671 7.9e-260 G Bacterial extracellular solute-binding protein
GDDOIJFM_00672 0.0 cydD V ABC transporter transmembrane region
GDDOIJFM_00674 1.7e-20 araE EGP Major facilitator Superfamily
GDDOIJFM_00675 4.5e-39 araE EGP Major facilitator Superfamily
GDDOIJFM_00676 0.0 fadD 6.2.1.3 I AMP-binding enzyme
GDDOIJFM_00677 2.7e-12 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
GDDOIJFM_00678 1.9e-211 K helix_turn _helix lactose operon repressor
GDDOIJFM_00679 2.5e-158 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GDDOIJFM_00680 1.5e-164 lepB 3.4.21.89 U Belongs to the peptidase S26 family
GDDOIJFM_00681 8.1e-60 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
GDDOIJFM_00683 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00684 1.3e-265 abcT3 P ATPases associated with a variety of cellular activities
GDDOIJFM_00685 0.0 pgi 5.3.1.9 G Belongs to the GPI family
GDDOIJFM_00688 1.2e-175 S Auxin Efflux Carrier
GDDOIJFM_00689 5.9e-127 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GDDOIJFM_00690 1.1e-144 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
GDDOIJFM_00691 3.2e-250 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GDDOIJFM_00692 8.2e-119
GDDOIJFM_00693 1.1e-77 soxR K MerR, DNA binding
GDDOIJFM_00694 1.6e-196 yghZ C Aldo/keto reductase family
GDDOIJFM_00695 2.4e-49 S Protein of unknown function (DUF3039)
GDDOIJFM_00696 6e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GDDOIJFM_00697 5.7e-77
GDDOIJFM_00698 1.5e-115 yceD S Uncharacterized ACR, COG1399
GDDOIJFM_00699 9.3e-21 rpmF J Belongs to the bacterial ribosomal protein bL32 family
GDDOIJFM_00700 9.7e-135 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
GDDOIJFM_00701 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
GDDOIJFM_00702 9e-93 ilvN 2.2.1.6 E ACT domain
GDDOIJFM_00703 3.9e-44 stbC S Plasmid stability protein
GDDOIJFM_00704 3.9e-72 vapC S Toxic component of a toxin-antitoxin (TA) module. An RNase
GDDOIJFM_00705 0.0 yjjK S ABC transporter
GDDOIJFM_00706 6.4e-103 dam 2.1.1.72 H D12 class N6 adenine-specific DNA methyltransferase
GDDOIJFM_00707 1.8e-112
GDDOIJFM_00709 2e-136 guaA1 6.3.5.2 F Peptidase C26
GDDOIJFM_00710 0.0 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
GDDOIJFM_00711 2.3e-162 P Cation efflux family
GDDOIJFM_00712 7.9e-270 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GDDOIJFM_00713 8.4e-206 S Endonuclease/Exonuclease/phosphatase family
GDDOIJFM_00714 7e-62 rpsP J Belongs to the bacterial ribosomal protein bS16 family
GDDOIJFM_00715 1e-34 CP_0960 S Belongs to the UPF0109 family
GDDOIJFM_00716 2.2e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GDDOIJFM_00717 2.5e-200 iunH1 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
GDDOIJFM_00718 2.4e-169 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
GDDOIJFM_00719 2.5e-13
GDDOIJFM_00720 1.1e-222 S Predicted membrane protein (DUF2207)
GDDOIJFM_00721 2.1e-09 S Predicted membrane protein (DUF2207)
GDDOIJFM_00722 0.0 S Predicted membrane protein (DUF2207)
GDDOIJFM_00723 2.4e-88 lemA S LemA family
GDDOIJFM_00724 2e-33 macB_7 V FtsX-like permease family
GDDOIJFM_00725 2.2e-120 V ABC transporter, ATP-binding protein
GDDOIJFM_00726 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
GDDOIJFM_00727 1e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GDDOIJFM_00728 1.7e-109
GDDOIJFM_00729 3.8e-18
GDDOIJFM_00730 9.5e-51
GDDOIJFM_00732 4.3e-278 M LPXTG cell wall anchor motif
GDDOIJFM_00733 0.0 Q von Willebrand factor (vWF) type A domain
GDDOIJFM_00734 1e-80
GDDOIJFM_00736 4.4e-17 P Sodium/hydrogen exchanger family
GDDOIJFM_00737 1.3e-70 ams 2.4.1.4, 3.2.1.1, 5.4.99.16 GH13 G Alpha amylase, catalytic domain
GDDOIJFM_00738 2e-80 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
GDDOIJFM_00739 1.2e-85 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
GDDOIJFM_00740 1.9e-258 MA20_36090 S Psort location Cytoplasmic, score 8.87
GDDOIJFM_00741 1.3e-106 K Bacterial regulatory proteins, tetR family
GDDOIJFM_00742 3e-41 L Transposase, Mutator family
GDDOIJFM_00743 2.2e-237 S AAA domain
GDDOIJFM_00744 1.6e-177 P Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00745 2.9e-165 malC P Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00746 1.4e-264 G Bacterial extracellular solute-binding protein
GDDOIJFM_00747 4.7e-306 Z012_09690 P Domain of unknown function (DUF4976)
GDDOIJFM_00748 3.5e-194 K helix_turn _helix lactose operon repressor
GDDOIJFM_00749 1.1e-261 aslB C Iron-sulfur cluster-binding domain
GDDOIJFM_00750 5.7e-133 S Sulfite exporter TauE/SafE
GDDOIJFM_00751 9.3e-11 L Transposase DDE domain
GDDOIJFM_00752 2.5e-272 aspA 4.3.1.1 E Fumarase C C-terminus
GDDOIJFM_00753 3.5e-135 M Mechanosensitive ion channel
GDDOIJFM_00754 3.7e-185 S CAAX protease self-immunity
GDDOIJFM_00755 5.7e-239 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
GDDOIJFM_00756 2.4e-151 U Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00757 9.9e-161 U Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00758 2.9e-218 P Bacterial extracellular solute-binding protein
GDDOIJFM_00759 5.4e-228 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
GDDOIJFM_00760 1.3e-179 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
GDDOIJFM_00761 2.5e-188 plsC2 2.3.1.51 I Phosphate acyltransferases
GDDOIJFM_00762 3.6e-64 psp1 3.5.99.10 J Endoribonuclease L-PSP
GDDOIJFM_00765 3.4e-117 cyaA 4.6.1.1 S CYTH
GDDOIJFM_00766 1.7e-171 trxA2 O Tetratricopeptide repeat
GDDOIJFM_00767 1.9e-178
GDDOIJFM_00768 6e-182
GDDOIJFM_00769 3.6e-158 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
GDDOIJFM_00770 1.4e-130 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
GDDOIJFM_00771 3.6e-48 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
GDDOIJFM_00772 6.1e-282 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GDDOIJFM_00773 5.5e-164 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GDDOIJFM_00774 1.3e-309 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GDDOIJFM_00775 2.4e-150 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GDDOIJFM_00776 2.9e-61 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GDDOIJFM_00777 1.7e-29 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GDDOIJFM_00778 6.4e-148 atpB C it plays a direct role in the translocation of protons across the membrane
GDDOIJFM_00779 1.6e-207 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
GDDOIJFM_00781 0.0 K RNA polymerase II activating transcription factor binding
GDDOIJFM_00782 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
GDDOIJFM_00783 2.8e-90 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
GDDOIJFM_00784 4.8e-97 mntP P Probably functions as a manganese efflux pump
GDDOIJFM_00785 1.4e-79
GDDOIJFM_00786 1.2e-132 KT Transcriptional regulatory protein, C terminal
GDDOIJFM_00787 1.3e-127 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GDDOIJFM_00788 2.3e-287 E Bacterial extracellular solute-binding proteins, family 5 Middle
GDDOIJFM_00789 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
GDDOIJFM_00790 0.0 S domain protein
GDDOIJFM_00791 6.8e-63 tyrA 5.4.99.5 E Chorismate mutase type II
GDDOIJFM_00792 1.4e-131 rafA 3.2.1.22 G alpha-galactosidase
GDDOIJFM_00793 1.3e-114 araQ U Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00794 9.5e-121 lacF P Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00795 2.6e-154 araN G Bacterial extracellular solute-binding protein
GDDOIJFM_00796 5.1e-50 K helix_turn_helix, arabinose operon control protein
GDDOIJFM_00797 8.3e-171 L Transposase
GDDOIJFM_00798 1.6e-25 pabC 2.6.1.42, 4.1.3.38 EH Amino-transferase class IV
GDDOIJFM_00800 2.7e-293 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
GDDOIJFM_00801 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
GDDOIJFM_00802 3.3e-52 S Protein of unknown function (DUF2469)
GDDOIJFM_00803 1.1e-195 2.3.1.57 J Acetyltransferase (GNAT) domain
GDDOIJFM_00804 2.1e-282 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GDDOIJFM_00805 2.7e-288 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
GDDOIJFM_00806 2.7e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GDDOIJFM_00807 8.7e-161 K Psort location Cytoplasmic, score
GDDOIJFM_00808 1.7e-178
GDDOIJFM_00809 2.4e-170 spoU 2.1.1.185 J RNA methyltransferase TrmH family
GDDOIJFM_00810 3.7e-111 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GDDOIJFM_00811 1.6e-210 rmuC S RmuC family
GDDOIJFM_00812 1.3e-42 csoR S Metal-sensitive transcriptional repressor
GDDOIJFM_00813 0.0 pacS 1.9.3.1, 3.6.3.54 P E1-E2 ATPase
GDDOIJFM_00814 1e-128 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
GDDOIJFM_00815 9.5e-129 xerH L Belongs to the 'phage' integrase family
GDDOIJFM_00816 8.6e-60
GDDOIJFM_00817 6.2e-43
GDDOIJFM_00818 1.3e-202 EGP Major Facilitator Superfamily
GDDOIJFM_00819 6.5e-210 2.7.13.3 T Histidine kinase
GDDOIJFM_00820 1.3e-111 K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
GDDOIJFM_00821 4e-130 V ABC transporter
GDDOIJFM_00822 3.8e-117
GDDOIJFM_00823 4.1e-39 L Transposase
GDDOIJFM_00824 9.8e-158 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
GDDOIJFM_00827 2.7e-71 rplI J Binds to the 23S rRNA
GDDOIJFM_00828 2e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GDDOIJFM_00829 4e-76 ssb1 L Single-stranded DNA-binding protein
GDDOIJFM_00830 4.6e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
GDDOIJFM_00831 1.3e-187 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GDDOIJFM_00832 1.8e-143 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
GDDOIJFM_00833 3.1e-307 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
GDDOIJFM_00834 3.2e-07 K Periplasmic binding protein domain
GDDOIJFM_00835 0.0 ubiB S ABC1 family
GDDOIJFM_00836 4.6e-37 S granule-associated protein
GDDOIJFM_00837 3.7e-142 cobQ S CobB/CobQ-like glutamine amidotransferase domain
GDDOIJFM_00838 8.6e-257 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
GDDOIJFM_00839 3.3e-257 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
GDDOIJFM_00840 1.9e-240 dinF V MatE
GDDOIJFM_00841 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
GDDOIJFM_00842 1e-54 glnB K Nitrogen regulatory protein P-II
GDDOIJFM_00843 1e-227 amt U Ammonium Transporter Family
GDDOIJFM_00844 4.9e-171 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
GDDOIJFM_00845 1e-151 icaR K Bacterial regulatory proteins, tetR family
GDDOIJFM_00846 1.1e-197 XK27_01805 M Glycosyltransferase like family 2
GDDOIJFM_00847 1.2e-301 pepD E Peptidase family C69
GDDOIJFM_00849 1.7e-289 3.5.2.6 V Beta-lactamase enzyme family
GDDOIJFM_00850 2.3e-303 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GDDOIJFM_00851 3.7e-193 opcA G Glucose-6-phosphate dehydrogenase subunit
GDDOIJFM_00852 1.3e-140 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
GDDOIJFM_00853 1.5e-272 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GDDOIJFM_00854 2.5e-253 S Putative ABC-transporter type IV
GDDOIJFM_00855 0.0 pip S YhgE Pip domain protein
GDDOIJFM_00856 1.8e-306 pip S YhgE Pip domain protein
GDDOIJFM_00857 3.2e-101 K Psort location Cytoplasmic, score 8.87
GDDOIJFM_00858 1.7e-67 S FMN_bind
GDDOIJFM_00859 1.7e-145 macB V ABC transporter, ATP-binding protein
GDDOIJFM_00860 6.1e-199 Z012_06715 V FtsX-like permease family
GDDOIJFM_00861 7e-221 macB_2 V ABC transporter permease
GDDOIJFM_00862 5e-232 S Predicted membrane protein (DUF2318)
GDDOIJFM_00863 2.8e-99 tpd P Fe2+ transport protein
GDDOIJFM_00864 9.7e-296 efeU_1 P Iron permease FTR1 family
GDDOIJFM_00866 3.3e-65 L Phage integrase, N-terminal SAM-like domain
GDDOIJFM_00869 4.4e-291 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GDDOIJFM_00871 9.5e-149 S Protein of unknown function (DUF805)
GDDOIJFM_00872 1.2e-227 3.1.1.31 G Lactonase, 7-bladed beta-propeller
GDDOIJFM_00873 2.4e-117
GDDOIJFM_00874 7.5e-123 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
GDDOIJFM_00875 9.7e-248 EGP Major facilitator Superfamily
GDDOIJFM_00876 1.4e-95 S GtrA-like protein
GDDOIJFM_00877 3.3e-61 S Macrophage migration inhibitory factor (MIF)
GDDOIJFM_00878 8.4e-107 L Belongs to the 'phage' integrase family
GDDOIJFM_00881 5.2e-121
GDDOIJFM_00882 5.7e-21 G ABC transporter permease
GDDOIJFM_00883 8.5e-57 G ABC transporter permease
GDDOIJFM_00884 7.8e-149 malC G Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00885 6.6e-133 L PFAM Integrase catalytic
GDDOIJFM_00886 3.1e-289 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
GDDOIJFM_00887 2e-310 pepD E Peptidase family C69
GDDOIJFM_00888 9.6e-106 S Phosphatidylethanolamine-binding protein
GDDOIJFM_00889 7.1e-21 D nuclear chromosome segregation
GDDOIJFM_00890 4.2e-30 3.4.17.14 M domain, Protein
GDDOIJFM_00891 7.8e-294 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GDDOIJFM_00893 3.3e-37 ptsH G PTS HPr component phosphorylation site
GDDOIJFM_00894 1.2e-104 K helix_turn _helix lactose operon repressor
GDDOIJFM_00895 1.9e-206 holB 2.7.7.7 L DNA polymerase III
GDDOIJFM_00896 1.6e-115 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GDDOIJFM_00897 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GDDOIJFM_00898 1.6e-168 3.6.1.27 I PAP2 superfamily
GDDOIJFM_00899 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
GDDOIJFM_00900 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GDDOIJFM_00901 9.1e-270 S Calcineurin-like phosphoesterase
GDDOIJFM_00902 3.4e-152 K FCD
GDDOIJFM_00903 2.6e-244 P Domain of unknown function (DUF4143)
GDDOIJFM_00904 0.0 nanI 3.2.1.18 GH33 G BNR repeat-like domain
GDDOIJFM_00906 3.2e-147 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GDDOIJFM_00907 2e-180 nanL 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
GDDOIJFM_00908 1.7e-148 oppF E ATPases associated with a variety of cellular activities
GDDOIJFM_00909 0.0 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
GDDOIJFM_00910 4.6e-153 oppB6 EP Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00911 1.3e-303 E Bacterial extracellular solute-binding proteins, family 5 Middle
GDDOIJFM_00912 9.8e-160 3.5.1.106 I carboxylic ester hydrolase activity
GDDOIJFM_00913 1.3e-125 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
GDDOIJFM_00914 6.3e-169 2.7.1.2 GK ROK family
GDDOIJFM_00915 1.7e-170 L Domain of unknown function (DUF4862)
GDDOIJFM_00916 9.6e-112
GDDOIJFM_00917 2.6e-213 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GDDOIJFM_00918 9.4e-98 askB 1.1.1.3, 2.7.2.4 E ACT domain
GDDOIJFM_00919 1.3e-134 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
GDDOIJFM_00920 3.6e-193 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
GDDOIJFM_00921 4.8e-69 V Abi-like protein
GDDOIJFM_00922 3.3e-196 3.4.22.70 M Sortase family
GDDOIJFM_00923 8.7e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GDDOIJFM_00924 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
GDDOIJFM_00925 6.5e-97 K Bacterial regulatory proteins, tetR family
GDDOIJFM_00926 4.5e-216 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
GDDOIJFM_00927 6.5e-54 S TIGRFAM helicase secretion neighborhood TadE-like protein
GDDOIJFM_00928 1.4e-57 U TadE-like protein
GDDOIJFM_00929 1.1e-41 S Protein of unknown function (DUF4244)
GDDOIJFM_00930 3.1e-116 gspF NU Type II secretion system (T2SS), protein F
GDDOIJFM_00931 1.2e-74 U Type ii secretion system
GDDOIJFM_00932 9.1e-192 cpaF U Type II IV secretion system protein
GDDOIJFM_00933 2.4e-123 cpaE D bacterial-type flagellum organization
GDDOIJFM_00934 1.6e-134 dedA S SNARE associated Golgi protein
GDDOIJFM_00935 8.8e-127 S HAD hydrolase, family IA, variant 3
GDDOIJFM_00936 2.1e-140 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
GDDOIJFM_00937 3.9e-115 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
GDDOIJFM_00938 3.1e-17 F Psort location CytoplasmicMembrane, score 10.00
GDDOIJFM_00939 1.2e-103 hspR K transcriptional regulator, MerR family
GDDOIJFM_00940 9.4e-157 dnaJ1 O DnaJ molecular chaperone homology domain
GDDOIJFM_00941 1e-58 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GDDOIJFM_00942 0.0 dnaK O Heat shock 70 kDa protein
GDDOIJFM_00943 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 M Aamy_C
GDDOIJFM_00944 1.1e-194 K Psort location Cytoplasmic, score
GDDOIJFM_00945 1.9e-144 traX S TraX protein
GDDOIJFM_00946 8.5e-165 malG G Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00947 1.3e-252 malF G Binding-protein-dependent transport system inner membrane component
GDDOIJFM_00948 2.3e-234 malE G Bacterial extracellular solute-binding protein
GDDOIJFM_00949 0.0 malL 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
GDDOIJFM_00950 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
GDDOIJFM_00951 3.6e-174 3.4.22.70 M Sortase family
GDDOIJFM_00952 0.0 M domain protein
GDDOIJFM_00953 0.0 M cell wall anchor domain protein
GDDOIJFM_00954 1.2e-186 K Psort location Cytoplasmic, score
GDDOIJFM_00955 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
GDDOIJFM_00956 2.4e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
GDDOIJFM_00957 2.4e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
GDDOIJFM_00958 1.4e-251 yhjE EGP Sugar (and other) transporter
GDDOIJFM_00959 2.8e-180 K helix_turn _helix lactose operon repressor
GDDOIJFM_00960 1.2e-278 scrT G Transporter major facilitator family protein
GDDOIJFM_00961 6.1e-301 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
GDDOIJFM_00963 1e-201 K helix_turn _helix lactose operon repressor
GDDOIJFM_00964 8.7e-58 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GDDOIJFM_00965 2.4e-147 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GDDOIJFM_00966 4.1e-281 clcA P Voltage gated chloride channel
GDDOIJFM_00967 1.5e-244 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GDDOIJFM_00968 6.1e-199 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
GDDOIJFM_00969 1.4e-148 yicL EG EamA-like transporter family
GDDOIJFM_00971 1.5e-172 htpX O Belongs to the peptidase M48B family
GDDOIJFM_00972 1.8e-278 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
GDDOIJFM_00973 0.0 cadA P E1-E2 ATPase
GDDOIJFM_00974 1.5e-262 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
GDDOIJFM_00975 1.4e-258 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
GDDOIJFM_00977 5.3e-145 yplQ S Haemolysin-III related
GDDOIJFM_00978 1.2e-52 ybjQ S Putative heavy-metal-binding
GDDOIJFM_00979 4.1e-74 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
GDDOIJFM_00980 0.0 KL Domain of unknown function (DUF3427)
GDDOIJFM_00981 1.5e-160 M Glycosyltransferase like family 2
GDDOIJFM_00982 1.4e-198 S Fic/DOC family
GDDOIJFM_00983 4.4e-132 S Pyridoxamine 5'-phosphate oxidase
GDDOIJFM_00984 4.8e-201 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GDDOIJFM_00985 0.0 lysX S Uncharacterised conserved protein (DUF2156)
GDDOIJFM_00986 5.7e-250 S Putative esterase
GDDOIJFM_00987 1.3e-23
GDDOIJFM_00988 1.2e-177 yddG EG EamA-like transporter family
GDDOIJFM_00989 3.4e-91 hsp20 O Hsp20/alpha crystallin family
GDDOIJFM_00990 7.5e-213 pldB 3.1.1.5 I Serine aminopeptidase, S33
GDDOIJFM_00991 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
GDDOIJFM_00992 2e-129 fhaA T Protein of unknown function (DUF2662)
GDDOIJFM_00993 1e-74 fhaB T Inner membrane component of T3SS, cytoplasmic domain
GDDOIJFM_00994 3.7e-272 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
GDDOIJFM_00995 2e-278 rodA D Belongs to the SEDS family
GDDOIJFM_00996 6.3e-263 pbpA M penicillin-binding protein
GDDOIJFM_00997 1e-173 T Protein tyrosine kinase
GDDOIJFM_00998 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
GDDOIJFM_00999 2e-120 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
GDDOIJFM_01000 9.3e-228 srtA 3.4.22.70 M Sortase family
GDDOIJFM_01001 1.8e-118 S Bacterial protein of unknown function (DUF881)
GDDOIJFM_01002 2.6e-69 crgA D Involved in cell division
GDDOIJFM_01003 3.9e-120 gluP 3.4.21.105 S Rhomboid family
GDDOIJFM_01004 2.6e-35
GDDOIJFM_01005 5.3e-36 2.1.1.72, 3.1.21.4 L restriction endonuclease
GDDOIJFM_01006 0.0 KL Type III restriction enzyme res subunit
GDDOIJFM_01007 4.7e-25 KL Type III restriction enzyme res subunit
GDDOIJFM_01009 2.6e-33
GDDOIJFM_01010 0.0 XK27_09800 I Psort location CytoplasmicMembrane, score 9.99
GDDOIJFM_01011 4.1e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GDDOIJFM_01013 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
GDDOIJFM_01014 1.7e-232 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GDDOIJFM_01015 3.5e-252 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
GDDOIJFM_01016 1.7e-213 ykiI
GDDOIJFM_01017 1.3e-122
GDDOIJFM_01019 2.1e-20 tag 3.2.2.20 L Methyladenine glycosylase
GDDOIJFM_01021 2.1e-125 S GyrI-like small molecule binding domain
GDDOIJFM_01022 1.1e-89 K Putative zinc ribbon domain
GDDOIJFM_01023 3.8e-25 zntR K bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
GDDOIJFM_01024 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
GDDOIJFM_01025 1.2e-126 3.6.1.13 L NUDIX domain
GDDOIJFM_01026 5.1e-178 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
GDDOIJFM_01027 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GDDOIJFM_01028 2.8e-124 pdtaR T Response regulator receiver domain protein
GDDOIJFM_01030 1.1e-109 aspA 3.6.1.13 L NUDIX domain
GDDOIJFM_01031 2.7e-274 pyk 2.7.1.40 G Pyruvate kinase
GDDOIJFM_01032 2.1e-177 terC P Integral membrane protein, TerC family
GDDOIJFM_01033 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
GDDOIJFM_01034 1.6e-115 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GDDOIJFM_01035 3.2e-254 rpsA J Ribosomal protein S1
GDDOIJFM_01036 1.5e-163 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GDDOIJFM_01037 4.4e-182 P Zinc-uptake complex component A periplasmic
GDDOIJFM_01038 3.8e-162 znuC P ATPases associated with a variety of cellular activities
GDDOIJFM_01039 7.5e-136 znuB U ABC 3 transport family
GDDOIJFM_01040 6.2e-88 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
GDDOIJFM_01041 2.1e-100 carD K CarD-like/TRCF domain
GDDOIJFM_01042 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
GDDOIJFM_01043 2.9e-128 T Response regulator receiver domain protein
GDDOIJFM_01044 4.9e-196 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GDDOIJFM_01045 1.4e-121 ctsW S Phosphoribosyl transferase domain
GDDOIJFM_01046 7e-147 cof 5.2.1.8 T Eukaryotic phosphomannomutase
GDDOIJFM_01047 6.3e-78 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
GDDOIJFM_01048 1.6e-261
GDDOIJFM_01049 0.0 S Glycosyl transferase, family 2
GDDOIJFM_01050 1.8e-55 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
GDDOIJFM_01051 3.8e-206 K Cell envelope-related transcriptional attenuator domain
GDDOIJFM_01052 0.0 D FtsK/SpoIIIE family
GDDOIJFM_01053 4.9e-47 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
GDDOIJFM_01054 4.6e-277 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GDDOIJFM_01055 4.8e-147 yplQ S Haemolysin-III related
GDDOIJFM_01056 9.8e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GDDOIJFM_01057 1.4e-74 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
GDDOIJFM_01058 1.2e-282 sdaA 4.3.1.17 E Serine dehydratase alpha chain
GDDOIJFM_01059 8.3e-94
GDDOIJFM_01061 1.4e-181 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
GDDOIJFM_01062 8.2e-102 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
GDDOIJFM_01063 9.5e-69 divIC D Septum formation initiator
GDDOIJFM_01064 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GDDOIJFM_01065 2.7e-179 1.1.1.65 C Aldo/keto reductase family
GDDOIJFM_01066 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GDDOIJFM_01067 1.5e-114 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
GDDOIJFM_01068 1.6e-92 2.3.1.183 M Acetyltransferase (GNAT) domain
GDDOIJFM_01069 0.0 S Uncharacterised protein family (UPF0182)
GDDOIJFM_01070 3.8e-22 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
GDDOIJFM_01071 9.7e-92 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
GDDOIJFM_01072 9.2e-138 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GDDOIJFM_01073 3e-96
GDDOIJFM_01074 3.1e-237 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
GDDOIJFM_01075 2.1e-282 thrC 4.2.3.1 E Threonine synthase N terminus
GDDOIJFM_01076 1.2e-40 S Psort location Cytoplasmic, score
GDDOIJFM_01077 3.7e-107
GDDOIJFM_01078 2.9e-120 S ABC-2 family transporter protein
GDDOIJFM_01079 8.5e-173 V ATPases associated with a variety of cellular activities
GDDOIJFM_01080 4.8e-58 K helix_turn_helix gluconate operon transcriptional repressor
GDDOIJFM_01081 4.8e-56 J Acetyltransferase (GNAT) domain
GDDOIJFM_01082 7.2e-118 S Haloacid dehalogenase-like hydrolase
GDDOIJFM_01083 0.0 recN L May be involved in recombinational repair of damaged DNA
GDDOIJFM_01084 1.9e-183 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GDDOIJFM_01085 1.9e-41 trkB P Cation transport protein
GDDOIJFM_01086 1.3e-49 trkA P TrkA-N domain
GDDOIJFM_01087 2.9e-93
GDDOIJFM_01088 6.7e-139 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
GDDOIJFM_01090 5.1e-198 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
GDDOIJFM_01091 1.8e-162 L Tetratricopeptide repeat
GDDOIJFM_01092 2.2e-254 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GDDOIJFM_01093 9.1e-82 S Protein of unknown function (DUF975)
GDDOIJFM_01094 7.4e-138 S Putative ABC-transporter type IV
GDDOIJFM_01095 4.6e-102 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
GDDOIJFM_01096 3.1e-71 M1-798 P Rhodanese Homology Domain
GDDOIJFM_01097 6e-146 moeB 2.7.7.80 H ThiF family
GDDOIJFM_01098 3.6e-157 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
GDDOIJFM_01099 1.2e-28 thiS 2.8.1.10 H ThiS family
GDDOIJFM_01100 4.4e-280 argH 4.3.2.1 E argininosuccinate lyase
GDDOIJFM_01101 2.4e-32 relB L RelB antitoxin
GDDOIJFM_01102 8.5e-44 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
GDDOIJFM_01103 7.4e-30 L PFAM Integrase catalytic
GDDOIJFM_01104 2.7e-56 L PFAM Integrase catalytic
GDDOIJFM_01105 1.2e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
GDDOIJFM_01106 5.9e-83 argR K Regulates arginine biosynthesis genes
GDDOIJFM_01107 3.9e-184 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GDDOIJFM_01108 3.2e-250 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
GDDOIJFM_01109 2.2e-179 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
GDDOIJFM_01110 2.4e-212 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
GDDOIJFM_01111 9.4e-203 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
GDDOIJFM_01112 1.9e-89
GDDOIJFM_01113 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
GDDOIJFM_01114 7.7e-202 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GDDOIJFM_01115 6e-160 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GDDOIJFM_01116 2.1e-163 cbiQ P Cobalt transport protein
GDDOIJFM_01117 6.5e-276 ykoD P ATPases associated with a variety of cellular activities
GDDOIJFM_01118 6.2e-108 ykoE S ABC-type cobalt transport system, permease component
GDDOIJFM_01119 2.1e-260 argE E Peptidase dimerisation domain
GDDOIJFM_01120 6.9e-102 S Protein of unknown function (DUF3043)
GDDOIJFM_01121 9.3e-278 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GDDOIJFM_01122 9.2e-144 S Domain of unknown function (DUF4191)
GDDOIJFM_01123 2.3e-281 glnA 6.3.1.2 E glutamine synthetase
GDDOIJFM_01124 3.9e-204 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
GDDOIJFM_01125 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GDDOIJFM_01126 0.0 S Tetratricopeptide repeat
GDDOIJFM_01127 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
GDDOIJFM_01129 3.9e-142 bioM P ATPases associated with a variety of cellular activities
GDDOIJFM_01130 9.6e-225 E Aminotransferase class I and II
GDDOIJFM_01131 1.5e-189 P NMT1/THI5 like
GDDOIJFM_01132 2.3e-134 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
GDDOIJFM_01133 3.1e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GDDOIJFM_01134 4.5e-129 recO L Involved in DNA repair and RecF pathway recombination
GDDOIJFM_01135 0.0 I acetylesterase activity
GDDOIJFM_01136 5.3e-231 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
GDDOIJFM_01137 2.9e-221 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
GDDOIJFM_01138 1.7e-208 2.7.11.1 NU Tfp pilus assembly protein FimV
GDDOIJFM_01140 1.6e-73 S Protein of unknown function (DUF3052)
GDDOIJFM_01141 1.5e-156 lon T Belongs to the peptidase S16 family
GDDOIJFM_01142 1.9e-295 S Zincin-like metallopeptidase
GDDOIJFM_01143 8.9e-292 uvrD2 3.6.4.12 L DNA helicase
GDDOIJFM_01144 1.3e-301 mphA S Aminoglycoside phosphotransferase
GDDOIJFM_01145 7.2e-33 S Protein of unknown function (DUF3107)
GDDOIJFM_01146 4.2e-169 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
GDDOIJFM_01147 3.2e-127 S Vitamin K epoxide reductase
GDDOIJFM_01148 2.7e-171 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
GDDOIJFM_01149 5.7e-149 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
GDDOIJFM_01150 1.2e-157 S Patatin-like phospholipase
GDDOIJFM_01151 1.1e-58 S Domain of unknown function (DUF4143)
GDDOIJFM_01152 7.2e-116 XK27_08050 O prohibitin homologues
GDDOIJFM_01153 2.7e-08 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
GDDOIJFM_01154 4.6e-176 S Domain of unknown function (DUF4143)
GDDOIJFM_01155 2.5e-42 XAC3035 O Glutaredoxin
GDDOIJFM_01156 4e-234 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
GDDOIJFM_01157 1.9e-126 ypfH S Phospholipase/Carboxylesterase
GDDOIJFM_01158 0.0 tetP J Elongation factor G, domain IV
GDDOIJFM_01160 8.3e-136 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
GDDOIJFM_01161 1.4e-104 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
GDDOIJFM_01162 6.7e-170 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
GDDOIJFM_01163 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
GDDOIJFM_01164 2e-241 carA 6.3.5.5 F Belongs to the CarA family
GDDOIJFM_01165 1.1e-92 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GDDOIJFM_01166 3.9e-104 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GDDOIJFM_01167 4.2e-127 ybbL V ATPases associated with a variety of cellular activities
GDDOIJFM_01168 4.5e-130 ybbM V Uncharacterised protein family (UPF0014)
GDDOIJFM_01169 4.5e-81 M L,D-transpeptidase catalytic domain
GDDOIJFM_01170 7.1e-53
GDDOIJFM_01171 8.8e-16
GDDOIJFM_01172 1.3e-49 tnp3512a L Transposase
GDDOIJFM_01173 3.9e-07 K Bacterial regulatory proteins, tetR family
GDDOIJFM_01174 1e-134 tam 2.1.1.144, 2.1.1.197 S Methyltransferase domain
GDDOIJFM_01175 1.5e-156 hbd2 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
GDDOIJFM_01176 4.5e-73 4.1.1.44 S Cupin domain
GDDOIJFM_01177 1.4e-128 4.1.1.44 S Carboxymuconolactone decarboxylase family
GDDOIJFM_01178 1.1e-184 S Membrane transport protein
GDDOIJFM_01179 1.3e-41 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
GDDOIJFM_01180 9.7e-110 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
GDDOIJFM_01181 9.2e-124 magIII L endonuclease III
GDDOIJFM_01182 3.1e-240 vbsD V MatE
GDDOIJFM_01183 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
GDDOIJFM_01184 1.7e-101 K LysR substrate binding domain
GDDOIJFM_01185 1.5e-144 K LysR substrate binding domain
GDDOIJFM_01186 1.3e-190 K helix_turn _helix lactose operon repressor
GDDOIJFM_01187 1.5e-140 P Phosphate transporter family
GDDOIJFM_01188 3.5e-164 ugpA P Binding-protein-dependent transport system inner membrane component
GDDOIJFM_01189 4e-142 ugpE G Binding-protein-dependent transport system inner membrane component
GDDOIJFM_01190 2.6e-239 ugpB G Bacterial extracellular solute-binding protein
GDDOIJFM_01191 6.4e-170 ugpQ 3.1.4.46 C Domain of unknown function
GDDOIJFM_01192 3.4e-109 P Protein of unknown function DUF47
GDDOIJFM_01193 2.3e-259 S Domain of unknown function (DUF4143)
GDDOIJFM_01194 5.6e-197 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
GDDOIJFM_01195 6.4e-67 K MerR family regulatory protein
GDDOIJFM_01196 1.7e-85 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GDDOIJFM_01197 1.3e-60 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GDDOIJFM_01198 1.2e-28 S polysaccharide biosynthetic process
GDDOIJFM_01199 8.2e-21 S Psort location CytoplasmicMembrane, score
GDDOIJFM_01200 2.7e-186 MA20_14895 S Conserved hypothetical protein 698
GDDOIJFM_01201 7.1e-147 rlrG K Bacterial regulatory helix-turn-helix protein, lysR family
GDDOIJFM_01202 1.3e-35 tmp1 S Domain of unknown function (DUF4391)
GDDOIJFM_01203 3.4e-80 tmp1 S Domain of unknown function (DUF4391)
GDDOIJFM_01204 6.2e-232 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GDDOIJFM_01205 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GDDOIJFM_01206 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
GDDOIJFM_01207 9.3e-62 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GDDOIJFM_01208 6.6e-111 yocS S SBF-like CPA transporter family (DUF4137)
GDDOIJFM_01210 4.2e-197 ltaE 4.1.2.48 E Beta-eliminating lyase
GDDOIJFM_01211 5.2e-220 M Glycosyl transferase 4-like domain
GDDOIJFM_01212 2.1e-230 mtnE 2.6.1.83 E Aminotransferase class I and II
GDDOIJFM_01213 2.2e-222 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
GDDOIJFM_01214 3.3e-138 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
GDDOIJFM_01215 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
GDDOIJFM_01216 4.8e-222 I alpha/beta hydrolase fold
GDDOIJFM_01217 9.1e-256 Q D-alanine [D-alanyl carrier protein] ligase activity
GDDOIJFM_01218 6.6e-111 Q D-alanine [D-alanyl carrier protein] ligase activity
GDDOIJFM_01219 1.9e-144
GDDOIJFM_01220 1.5e-29 S Protein of unknown function (DUF4230)
GDDOIJFM_01223 2.4e-08 S Protein of unknown function (DUF4230)
GDDOIJFM_01224 1.1e-102 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
GDDOIJFM_01225 3.7e-12 C Aldo/keto reductase family
GDDOIJFM_01226 3.8e-31
GDDOIJFM_01227 2.3e-298 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
GDDOIJFM_01228 3.5e-293 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
GDDOIJFM_01229 9.2e-184 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
GDDOIJFM_01230 2.2e-243 purD 6.3.4.13 F Belongs to the GARS family
GDDOIJFM_01231 3.2e-297 aldH 1.2.1.3, 1.2.1.5 C Aldehyde dehydrogenase family
GDDOIJFM_01232 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
GDDOIJFM_01233 2.3e-154 P Zinc-uptake complex component A periplasmic
GDDOIJFM_01235 6.1e-181 ycgR S Predicted permease
GDDOIJFM_01236 7.8e-140 S TIGRFAM TIGR03943 family protein
GDDOIJFM_01237 1.1e-84 zur P Ferric uptake regulator family
GDDOIJFM_01238 7.1e-64
GDDOIJFM_01239 1.1e-70 XK27_06785 V ABC transporter
GDDOIJFM_01240 5.8e-28 ylbB V FtsX-like permease family
GDDOIJFM_01241 2.6e-84 ylbB V FtsX-like permease family
GDDOIJFM_01242 1.2e-68 zur P Belongs to the Fur family
GDDOIJFM_01243 4.2e-225 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GDDOIJFM_01244 9.6e-86 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
GDDOIJFM_01245 2.4e-181 adh3 C Zinc-binding dehydrogenase
GDDOIJFM_01246 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GDDOIJFM_01247 5.6e-278 macB_8 V MacB-like periplasmic core domain
GDDOIJFM_01248 8e-177 M Conserved repeat domain
GDDOIJFM_01249 5.3e-134 V ATPases associated with a variety of cellular activities
GDDOIJFM_01250 2.1e-85 msrA 1.8.4.11, 1.8.4.12 O peptide-methionine (S)-S-oxide reductase activity
GDDOIJFM_01251 0.0 E ABC transporter, substrate-binding protein, family 5
GDDOIJFM_01252 4.5e-13 L Psort location Cytoplasmic, score 8.87
GDDOIJFM_01253 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
GDDOIJFM_01254 9.9e-225 K helix_turn _helix lactose operon repressor
GDDOIJFM_01255 3.6e-257 G Bacterial extracellular solute-binding protein
GDDOIJFM_01258 3e-159 K Helix-turn-helix domain, rpiR family
GDDOIJFM_01260 3.3e-30
GDDOIJFM_01261 8.5e-210 ybiR P Citrate transporter
GDDOIJFM_01262 5.9e-296 EK Alanine-glyoxylate amino-transferase
GDDOIJFM_01263 1.1e-115 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
GDDOIJFM_01264 5.3e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
GDDOIJFM_01265 5.1e-34
GDDOIJFM_01266 6.9e-69 S PIN domain
GDDOIJFM_01267 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
GDDOIJFM_01268 3.1e-245 dgt 3.1.5.1 F Phosphohydrolase-associated domain
GDDOIJFM_01269 1.5e-263 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GDDOIJFM_01270 8.5e-268 yhdG E aromatic amino acid transport protein AroP K03293
GDDOIJFM_01271 1.7e-104 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GDDOIJFM_01272 8e-93 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
GDDOIJFM_01273 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
GDDOIJFM_01274 1.2e-219 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
GDDOIJFM_01275 4.8e-193 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
GDDOIJFM_01276 1.3e-137 sapF E ATPases associated with a variety of cellular activities
GDDOIJFM_01277 6.5e-137 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
GDDOIJFM_01278 2.5e-146 EP Binding-protein-dependent transport system inner membrane component
GDDOIJFM_01279 1.3e-166 P Binding-protein-dependent transport system inner membrane component
GDDOIJFM_01280 8.8e-290 E ABC transporter, substrate-binding protein, family 5
GDDOIJFM_01282 5.5e-115 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
GDDOIJFM_01283 1e-278 G Bacterial extracellular solute-binding protein
GDDOIJFM_01284 3.9e-259 G Bacterial extracellular solute-binding protein
GDDOIJFM_01285 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GDDOIJFM_01286 9e-167 4.2.1.68 M Enolase C-terminal domain-like
GDDOIJFM_01287 5.1e-142 IQ KR domain
GDDOIJFM_01288 2.5e-152 S Amidohydrolase
GDDOIJFM_01289 7.5e-166 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
GDDOIJFM_01290 0.0 2.4.1.230, 3.2.1.51 GH65,GH95 G Glycosyl hydrolase family 65, N-terminal domain
GDDOIJFM_01291 7.7e-157 yvgN 1.1.1.346 S Aldo/keto reductase family
GDDOIJFM_01292 1.1e-53 acyP 3.6.1.7 C Acylphosphatase
GDDOIJFM_01293 1.9e-253 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
GDDOIJFM_01294 1.8e-220 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
GDDOIJFM_01295 4.6e-111 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
GDDOIJFM_01296 5e-99
GDDOIJFM_01297 1.4e-121 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
GDDOIJFM_01298 1.4e-130 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
GDDOIJFM_01299 8.9e-278 S Uncharacterized protein conserved in bacteria (DUF2252)
GDDOIJFM_01300 2.1e-265 glnA2 6.3.1.2 E glutamine synthetase
GDDOIJFM_01301 1.1e-217 EGP Major facilitator Superfamily
GDDOIJFM_01302 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
GDDOIJFM_01303 3.4e-123 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
GDDOIJFM_01304 4.6e-272 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GDDOIJFM_01305 1.7e-176 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
GDDOIJFM_01306 1.4e-162 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GDDOIJFM_01307 6.9e-130 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GDDOIJFM_01308 3e-47 M Lysin motif
GDDOIJFM_01309 8.4e-78 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GDDOIJFM_01310 7.5e-230 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
GDDOIJFM_01311 0.0 L DNA helicase
GDDOIJFM_01312 1.3e-93 mraZ K Belongs to the MraZ family
GDDOIJFM_01313 8.7e-190 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
GDDOIJFM_01314 6.9e-67 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
GDDOIJFM_01315 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
GDDOIJFM_01316 2e-155 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GDDOIJFM_01317 7.4e-240 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
GDDOIJFM_01318 1.2e-205 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GDDOIJFM_01319 5.1e-273 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GDDOIJFM_01320 2.5e-225 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
GDDOIJFM_01321 1.2e-219 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GDDOIJFM_01322 2.5e-286 murC 6.3.2.8 M Belongs to the MurCDEF family
GDDOIJFM_01323 2.1e-172 ftsQ 6.3.2.4 D Cell division protein FtsQ
GDDOIJFM_01324 7.7e-14
GDDOIJFM_01325 3.5e-64
GDDOIJFM_01327 1.3e-47
GDDOIJFM_01330 1.2e-07
GDDOIJFM_01332 2.1e-50 Q methyltransferase
GDDOIJFM_01333 2.6e-08
GDDOIJFM_01334 2.7e-70 2.1.1.37 L C-5 cytosine-specific DNA methylase
GDDOIJFM_01335 5.4e-104 K BRO family, N-terminal domain
GDDOIJFM_01339 6.3e-86 yqaJ L YqaJ-like viral recombinase domain
GDDOIJFM_01340 3.2e-73 recT L RecT family
GDDOIJFM_01342 1.2e-48 ssb1 L Single-strand binding protein family
GDDOIJFM_01343 3.4e-62
GDDOIJFM_01344 1e-50
GDDOIJFM_01349 9.2e-43 D DNA N-6-adenine-methyltransferase (Dam)
GDDOIJFM_01350 4.2e-75
GDDOIJFM_01351 9.8e-09
GDDOIJFM_01355 4.3e-15
GDDOIJFM_01356 8e-121
GDDOIJFM_01357 5.1e-50 L HNH nucleases
GDDOIJFM_01359 3.3e-43
GDDOIJFM_01360 6.2e-304 S Terminase
GDDOIJFM_01361 1.3e-68 S Phage portal protein
GDDOIJFM_01362 3.7e-33 xkdG S Phage capsid family
GDDOIJFM_01363 1.7e-112 xkdG S Phage capsid family
GDDOIJFM_01365 1.6e-19
GDDOIJFM_01366 1.8e-31
GDDOIJFM_01367 5.4e-25
GDDOIJFM_01368 5.8e-31
GDDOIJFM_01369 1.4e-43
GDDOIJFM_01371 1.4e-29
GDDOIJFM_01373 1e-83 NT phage tail tape measure protein
GDDOIJFM_01375 0.0 ebh 2.1.1.80, 3.1.1.61 S cellulase activity
GDDOIJFM_01377 2.3e-37
GDDOIJFM_01384 8.4e-76 V Ami_2
GDDOIJFM_01385 3.8e-15
GDDOIJFM_01386 6.9e-53
GDDOIJFM_01387 1.4e-27 K Transcriptional regulator
GDDOIJFM_01388 2.8e-11
GDDOIJFM_01389 1.7e-09
GDDOIJFM_01390 6.4e-130 int8 L Phage integrase family
GDDOIJFM_01391 3.2e-86 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GDDOIJFM_01392 4.3e-77 G Major Facilitator Superfamily
GDDOIJFM_01393 6.4e-43 G Major Facilitator Superfamily
GDDOIJFM_01394 1.2e-168 2.7.1.4 G pfkB family carbohydrate kinase
GDDOIJFM_01395 2.3e-226 GK ROK family
GDDOIJFM_01396 2.2e-165 2.7.1.2 GK ROK family
GDDOIJFM_01397 3.6e-210 GK ROK family
GDDOIJFM_01398 6.2e-151 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GDDOIJFM_01399 6.5e-248 nagA 3.5.1.25 G Amidohydrolase family
GDDOIJFM_01400 6.6e-98 3.6.1.55 F NUDIX domain
GDDOIJFM_01401 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
GDDOIJFM_01402 4e-303 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
GDDOIJFM_01403 0.0 smc D Required for chromosome condensation and partitioning
GDDOIJFM_01404 3.3e-80 V Acetyltransferase (GNAT) domain
GDDOIJFM_01405 2.3e-195 V Acetyltransferase (GNAT) domain
GDDOIJFM_01406 7.1e-297 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GDDOIJFM_01407 1.8e-136 sigH K Belongs to the sigma-70 factor family. ECF subfamily
GDDOIJFM_01408 3.3e-52
GDDOIJFM_01409 1.1e-188 galM 5.1.3.3 G Aldose 1-epimerase
GDDOIJFM_01410 4.2e-191 galM 5.1.3.3 G Aldose 1-epimerase
GDDOIJFM_01411 7.5e-183 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
GDDOIJFM_01412 4.2e-89 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GDDOIJFM_01413 1.3e-196 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
GDDOIJFM_01414 4.2e-135 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
GDDOIJFM_01415 2e-55 S Spermine/spermidine synthase domain
GDDOIJFM_01416 1.1e-112 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GDDOIJFM_01417 6.2e-25 rpmI J Ribosomal protein L35
GDDOIJFM_01418 1.8e-60 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GDDOIJFM_01419 6.6e-215 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
GDDOIJFM_01420 2.7e-158 xerD D recombinase XerD
GDDOIJFM_01421 1.5e-151 soj D CobQ CobB MinD ParA nucleotide binding domain protein
GDDOIJFM_01422 8.5e-151 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
GDDOIJFM_01423 3.1e-116 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GDDOIJFM_01424 3.4e-160 nrtR 3.6.1.55 F NUDIX hydrolase
GDDOIJFM_01425 6.3e-251 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
GDDOIJFM_01426 1.1e-295 nadB 1.3.5.4, 1.4.3.16, 2.4.2.19 H Catalyzes the oxidation of L-aspartate to iminoaspartate
GDDOIJFM_01427 3.8e-162 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, N-terminal domain
GDDOIJFM_01428 6.7e-240 iscS1 2.8.1.7 E Aminotransferase class-V
GDDOIJFM_01429 5.9e-19 naiP U Sugar (and other) transporter
GDDOIJFM_01430 0.0 V FtsX-like permease family
GDDOIJFM_01431 4.8e-137 V ATPases associated with a variety of cellular activities
GDDOIJFM_01432 7e-107 K Virulence activator alpha C-term
GDDOIJFM_01433 0.0 typA T Elongation factor G C-terminus
GDDOIJFM_01434 5.2e-78
GDDOIJFM_01435 1.3e-187 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
GDDOIJFM_01436 6.5e-190 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
GDDOIJFM_01437 2.9e-41
GDDOIJFM_01438 0.0 MV MacB-like periplasmic core domain
GDDOIJFM_01439 6.4e-148 V ABC transporter, ATP-binding protein
GDDOIJFM_01440 1.8e-187 xerC D Belongs to the 'phage' integrase family. XerC subfamily
GDDOIJFM_01441 0.0 E ABC transporter, substrate-binding protein, family 5
GDDOIJFM_01442 8.9e-154 dppB EP Binding-protein-dependent transport system inner membrane component
GDDOIJFM_01443 1.1e-173 dppC EP N-terminal TM domain of oligopeptide transport permease C
GDDOIJFM_01444 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
GDDOIJFM_01445 3.3e-171 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
GDDOIJFM_01446 8.1e-154 S Protein of unknown function (DUF3710)
GDDOIJFM_01447 3.8e-134 S Protein of unknown function (DUF3159)
GDDOIJFM_01448 9e-242 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GDDOIJFM_01449 2.2e-97
GDDOIJFM_01450 0.0 ctpE P E1-E2 ATPase
GDDOIJFM_01451 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
GDDOIJFM_01452 6.8e-121 E Psort location Cytoplasmic, score 8.87
GDDOIJFM_01453 2.2e-82 K helix_turn_helix, Lux Regulon
GDDOIJFM_01454 1.5e-136 ybhL S Belongs to the BI1 family
GDDOIJFM_01455 2.1e-166 ydeD EG EamA-like transporter family
GDDOIJFM_01456 1.7e-148 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
GDDOIJFM_01457 9e-278 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
GDDOIJFM_01458 4.8e-182 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GDDOIJFM_01459 2.4e-150 fic D Fic/DOC family
GDDOIJFM_01460 0.0 ftsK D FtsK SpoIIIE family protein
GDDOIJFM_01461 2.1e-117 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GDDOIJFM_01462 4.6e-97 cinA 3.5.1.42 S Belongs to the CinA family
GDDOIJFM_01463 2.2e-77 K Helix-turn-helix XRE-family like proteins
GDDOIJFM_01464 1.2e-31 S Protein of unknown function (DUF3046)
GDDOIJFM_01465 1.1e-196 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GDDOIJFM_01466 8.7e-102 recX S Modulates RecA activity
GDDOIJFM_01467 2.4e-113 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GDDOIJFM_01468 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GDDOIJFM_01469 1.8e-190 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
GDDOIJFM_01470 6.5e-117
GDDOIJFM_01471 4e-130 plsC2 2.3.1.51 I Phosphate acyltransferases
GDDOIJFM_01472 0.0 pknL 2.7.11.1 KLT PASTA
GDDOIJFM_01473 6.5e-196 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
GDDOIJFM_01474 9.6e-115
GDDOIJFM_01475 8.2e-191 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
GDDOIJFM_01476 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
GDDOIJFM_01477 3.8e-221 G Major Facilitator Superfamily
GDDOIJFM_01478 1.7e-171 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GDDOIJFM_01479 0.0 lhr L DEAD DEAH box helicase
GDDOIJFM_01480 1.2e-48 K Psort location Cytoplasmic, score
GDDOIJFM_01481 5.2e-43 K Psort location Cytoplasmic, score
GDDOIJFM_01483 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
GDDOIJFM_01484 7.7e-233 S Type I phosphodiesterase / nucleotide pyrophosphatase
GDDOIJFM_01485 1.2e-149 S Protein of unknown function (DUF3071)
GDDOIJFM_01486 1.4e-47 S Domain of unknown function (DUF4193)
GDDOIJFM_01487 2.9e-84 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
GDDOIJFM_01488 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GDDOIJFM_01489 1.3e-112 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GDDOIJFM_01491 4.7e-66
GDDOIJFM_01492 1e-128
GDDOIJFM_01493 3.9e-27
GDDOIJFM_01494 1.4e-14
GDDOIJFM_01495 2.6e-99 S Helix-turn-helix domain
GDDOIJFM_01496 1.1e-43 S Helix-turn-helix domain
GDDOIJFM_01497 7.4e-42
GDDOIJFM_01498 1.8e-89 S Transcription factor WhiB
GDDOIJFM_01499 5.7e-102 parA D AAA domain
GDDOIJFM_01500 6.3e-23
GDDOIJFM_01501 2.6e-16 S Transcription factor WhiB
GDDOIJFM_01502 2.9e-39
GDDOIJFM_01503 0.0 XK27_00515 D Cell surface antigen C-terminus
GDDOIJFM_01504 8.9e-26
GDDOIJFM_01505 5.3e-145
GDDOIJFM_01506 8.8e-62 S PrgI family protein
GDDOIJFM_01507 0.0 trsE U type IV secretory pathway VirB4
GDDOIJFM_01508 1.4e-261 isp2 3.2.1.96 M CHAP domain
GDDOIJFM_01509 4.9e-96
GDDOIJFM_01510 1.9e-128
GDDOIJFM_01511 8.6e-100 K DNA binding
GDDOIJFM_01512 4.8e-102 dam2 2.1.1.72 L D12 class N6 adenine-specific DNA methyltransferase
GDDOIJFM_01514 0.0 U Type IV secretory system Conjugative DNA transfer
GDDOIJFM_01515 4.4e-44
GDDOIJFM_01516 6.1e-51
GDDOIJFM_01518 1.7e-135 S Protein of unknown function (DUF3801)
GDDOIJFM_01519 7.4e-289 ltrBE1 U Relaxase/Mobilisation nuclease domain
GDDOIJFM_01520 1e-63 S Bacterial mobilisation protein (MobC)
GDDOIJFM_01521 5.5e-42 K Protein of unknown function (DUF2442)
GDDOIJFM_01522 2.1e-44 S Domain of unknown function (DUF4160)
GDDOIJFM_01524 5.3e-31
GDDOIJFM_01525 2.7e-68
GDDOIJFM_01526 0.0 topB 5.99.1.2 L DNA topoisomerase
GDDOIJFM_01529 2.6e-64
GDDOIJFM_01530 2.2e-59
GDDOIJFM_01531 1.2e-52
GDDOIJFM_01532 9.5e-26
GDDOIJFM_01533 4.5e-143 fic D Fic/DOC family
GDDOIJFM_01534 8.7e-259 L Phage integrase family
GDDOIJFM_01535 2.3e-74
GDDOIJFM_01537 1.3e-251 S HipA-like C-terminal domain
GDDOIJFM_01538 1.4e-158 S Fic/DOC family
GDDOIJFM_01539 1.2e-133 S PAC2 family
GDDOIJFM_01540 1.8e-156 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
GDDOIJFM_01541 9.6e-157 G Fructosamine kinase
GDDOIJFM_01542 6.8e-212 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
GDDOIJFM_01543 3.7e-191 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
GDDOIJFM_01544 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
GDDOIJFM_01545 3.6e-202 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
GDDOIJFM_01546 1.4e-240 brnQ U Component of the transport system for branched-chain amino acids
GDDOIJFM_01547 5.8e-190
GDDOIJFM_01548 4e-300 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
GDDOIJFM_01549 2.9e-159 S Sucrose-6F-phosphate phosphohydrolase
GDDOIJFM_01550 8.5e-176 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
GDDOIJFM_01551 2.5e-34 secG U Preprotein translocase SecG subunit
GDDOIJFM_01552 3.5e-146 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GDDOIJFM_01553 5.8e-222 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
GDDOIJFM_01554 3.5e-169 whiA K May be required for sporulation
GDDOIJFM_01555 8.3e-179 rapZ S Displays ATPase and GTPase activities
GDDOIJFM_01556 3.7e-190 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
GDDOIJFM_01557 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
GDDOIJFM_01558 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
GDDOIJFM_01559 5e-234 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
GDDOIJFM_01560 5.3e-91 XK27_08585 S Hypothetical bacterial integral membrane protein (Trep_Strep)
GDDOIJFM_01561 1.4e-26 P ABC transporter
GDDOIJFM_01562 8.3e-24 P ABC transporter
GDDOIJFM_01563 5.2e-56 P ABC transporter
GDDOIJFM_01564 1.4e-130 S Enoyl-(Acyl carrier protein) reductase
GDDOIJFM_01565 3.7e-301 ybiT S ABC transporter
GDDOIJFM_01566 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GDDOIJFM_01567 9.4e-123 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GDDOIJFM_01568 9.4e-172 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
GDDOIJFM_01569 7.3e-219 MA20_36090 S Psort location Cytoplasmic, score 8.87
GDDOIJFM_01570 3.4e-28
GDDOIJFM_01571 5e-125 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GDDOIJFM_01572 3.3e-183 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
GDDOIJFM_01573 6.3e-159 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
GDDOIJFM_01574 1.5e-175 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
GDDOIJFM_01575 3.3e-291 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
GDDOIJFM_01576 7e-74 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
GDDOIJFM_01577 8.3e-179 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
GDDOIJFM_01578 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
GDDOIJFM_01579 1.7e-187 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GDDOIJFM_01580 2.8e-162 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
GDDOIJFM_01581 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GDDOIJFM_01583 1.3e-99 sixA 3.6.1.55 T Phosphoglycerate mutase family
GDDOIJFM_01584 7.8e-202 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
GDDOIJFM_01585 1.3e-133 S Phospholipase/Carboxylesterase
GDDOIJFM_01587 2e-140 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
GDDOIJFM_01588 6.5e-147 S phosphoesterase or phosphohydrolase
GDDOIJFM_01589 5e-90 S Appr-1'-p processing enzyme
GDDOIJFM_01590 1.5e-177 I alpha/beta hydrolase fold
GDDOIJFM_01591 2e-42 L Transposase, Mutator family
GDDOIJFM_01592 3.2e-139
GDDOIJFM_01593 6.3e-91 bcp 1.11.1.15 O Redoxin
GDDOIJFM_01594 9.3e-158 S Sucrose-6F-phosphate phosphohydrolase
GDDOIJFM_01595 1.2e-157 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
GDDOIJFM_01596 3.3e-244 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
GDDOIJFM_01597 6.6e-81
GDDOIJFM_01598 0.0 S Glycosyl hydrolases related to GH101 family, GH129
GDDOIJFM_01599 0.0 E ABC transporter, substrate-binding protein, family 5
GDDOIJFM_01600 1.2e-299 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
GDDOIJFM_01601 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
GDDOIJFM_01602 9e-64 K helix_turn _helix lactose operon repressor
GDDOIJFM_01603 1e-190 K helix_turn _helix lactose operon repressor
GDDOIJFM_01605 7.4e-255 hemN H Involved in the biosynthesis of porphyrin-containing compound
GDDOIJFM_01606 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
GDDOIJFM_01607 5.8e-34 rpsT J Binds directly to 16S ribosomal RNA
GDDOIJFM_01608 8.8e-139 S UPF0126 domain
GDDOIJFM_01609 8.8e-143 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
GDDOIJFM_01610 1.6e-226 ilvE 2.6.1.42 E Amino-transferase class IV
GDDOIJFM_01611 1.7e-103 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
GDDOIJFM_01612 5.4e-234 yhjX EGP Major facilitator Superfamily
GDDOIJFM_01613 1.5e-232 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
GDDOIJFM_01614 2.1e-43 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
GDDOIJFM_01615 4e-204 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
GDDOIJFM_01616 0.0 fadD 6.2.1.3 I AMP-binding enzyme
GDDOIJFM_01617 4.3e-186 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GDDOIJFM_01618 5.6e-248 corC S CBS domain
GDDOIJFM_01619 4.7e-102 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GDDOIJFM_01620 2.5e-217 phoH T PhoH-like protein
GDDOIJFM_01621 4.4e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
GDDOIJFM_01622 3e-134 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
GDDOIJFM_01624 3.3e-166 spoU 2.1.1.185 J SpoU rRNA Methylase family
GDDOIJFM_01625 6.2e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
GDDOIJFM_01626 3.2e-109 yitW S Iron-sulfur cluster assembly protein
GDDOIJFM_01627 8.1e-102 iscU C SUF system FeS assembly protein, NifU family
GDDOIJFM_01628 3.2e-239 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GDDOIJFM_01629 7e-144 sufC O FeS assembly ATPase SufC
GDDOIJFM_01630 4.3e-236 sufD O FeS assembly protein SufD
GDDOIJFM_01631 1.5e-291 sufB O FeS assembly protein SufB
GDDOIJFM_01632 1.6e-310 S L,D-transpeptidase catalytic domain
GDDOIJFM_01633 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
GDDOIJFM_01634 7.7e-79 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
GDDOIJFM_01635 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
GDDOIJFM_01636 4.3e-217 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
GDDOIJFM_01637 5.3e-70 3.4.23.43 S Type IV leader peptidase family
GDDOIJFM_01638 1.7e-194 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GDDOIJFM_01639 2.7e-71 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GDDOIJFM_01640 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GDDOIJFM_01641 1.6e-35
GDDOIJFM_01642 2.4e-55 WQ51_05790 S Bacterial protein of unknown function (DUF948)
GDDOIJFM_01643 1.6e-128 pgm3 G Phosphoglycerate mutase family
GDDOIJFM_01644 1.2e-48 relB L RelB antitoxin
GDDOIJFM_01645 7.1e-67 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
GDDOIJFM_01646 1.2e-111 E Transglutaminase-like superfamily
GDDOIJFM_01647 3.1e-46 sdpI S SdpI/YhfL protein family
GDDOIJFM_01648 2.5e-91 3.5.4.5 F cytidine deaminase activity
GDDOIJFM_01649 1.8e-155 S Peptidase C26
GDDOIJFM_01650 1.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GDDOIJFM_01651 2.5e-161 lolD V ABC transporter
GDDOIJFM_01652 1.3e-216 V FtsX-like permease family
GDDOIJFM_01653 1.4e-63 S Domain of unknown function (DUF4418)
GDDOIJFM_01654 0.0 pcrA 3.6.4.12 L DNA helicase
GDDOIJFM_01655 9.7e-106 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
GDDOIJFM_01656 8.8e-243 pbuX F Permease family
GDDOIJFM_01657 2.8e-31 yozG K Cro/C1-type HTH DNA-binding domain
GDDOIJFM_01658 1.1e-40 S Protein of unknown function (DUF2975)
GDDOIJFM_01659 4.8e-159 I Serine aminopeptidase, S33
GDDOIJFM_01660 2.1e-163 M pfam nlp p60
GDDOIJFM_01661 3.5e-106 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
GDDOIJFM_01662 3.1e-110 3.4.13.21 E Peptidase family S51
GDDOIJFM_01663 2.8e-195
GDDOIJFM_01664 1.5e-39 E GDSL-like Lipase/Acylhydrolase family
GDDOIJFM_01665 1.2e-285 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
GDDOIJFM_01666 1.1e-251 V ABC-2 family transporter protein
GDDOIJFM_01667 2.4e-223 V ABC-2 family transporter protein
GDDOIJFM_01668 5e-187 V ATPases associated with a variety of cellular activities
GDDOIJFM_01669 4.8e-11 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
GDDOIJFM_01670 3.5e-223 T Histidine kinase
GDDOIJFM_01671 5.6e-110 K helix_turn_helix, Lux Regulon
GDDOIJFM_01672 1e-113 MA20_27875 P Protein of unknown function DUF47
GDDOIJFM_01673 3.1e-187 pit P Phosphate transporter family
GDDOIJFM_01674 2.2e-259 nplT G Alpha amylase, catalytic domain
GDDOIJFM_01675 3.4e-307 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
GDDOIJFM_01676 8.4e-235 rutG F Permease family
GDDOIJFM_01677 1.4e-161 3.1.3.73 G Phosphoglycerate mutase family
GDDOIJFM_01678 7.9e-108 3.1.3.27 E haloacid dehalogenase-like hydrolase
GDDOIJFM_01679 5.4e-240 EGP Major facilitator Superfamily
GDDOIJFM_01680 1.7e-63 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GDDOIJFM_01681 8.9e-94 S Sulfite exporter TauE/SafE
GDDOIJFM_01682 2.9e-57 L Helix-turn-helix domain
GDDOIJFM_01683 3.2e-107 S Sulfite exporter TauE/SafE
GDDOIJFM_01684 4e-272 aslB C Iron-sulfur cluster-binding domain
GDDOIJFM_01685 0.0 P Domain of unknown function (DUF4976)
GDDOIJFM_01686 2.2e-252 gtr U Sugar (and other) transporter
GDDOIJFM_01687 2.2e-159 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
GDDOIJFM_01688 3.1e-220 GK ROK family
GDDOIJFM_01689 8.7e-176 2.7.1.2 GK ROK family
GDDOIJFM_01690 1.9e-147 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GDDOIJFM_01691 2.8e-243 nagA 3.5.1.25 G Amidohydrolase family
GDDOIJFM_01692 2.9e-154 G Binding-protein-dependent transport system inner membrane component
GDDOIJFM_01693 1.1e-143 malC G Binding-protein-dependent transport system inner membrane component
GDDOIJFM_01694 8.9e-245 msmE7 G Bacterial extracellular solute-binding protein
GDDOIJFM_01695 3.8e-229 nagC GK ROK family
GDDOIJFM_01696 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
GDDOIJFM_01697 2.6e-79 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
GDDOIJFM_01698 0.0 yjcE P Sodium/hydrogen exchanger family
GDDOIJFM_01699 2.5e-120 S membrane transporter protein
GDDOIJFM_01700 7.3e-146 ypfH S Phospholipase/Carboxylesterase
GDDOIJFM_01701 3.7e-154
GDDOIJFM_01702 9e-112 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
GDDOIJFM_01703 1e-36
GDDOIJFM_01704 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
GDDOIJFM_01705 2e-16 K helix_turn _helix lactose operon repressor
GDDOIJFM_01706 7.5e-86 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GDDOIJFM_01707 1.6e-288 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
GDDOIJFM_01708 6.3e-200 EGP Major facilitator Superfamily
GDDOIJFM_01709 1.2e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GDDOIJFM_01710 5.9e-168 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
GDDOIJFM_01711 4.2e-302 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
GDDOIJFM_01712 3.9e-270 KLT Domain of unknown function (DUF4032)
GDDOIJFM_01713 4.4e-155
GDDOIJFM_01714 7.6e-18 tnp7109-21 L Integrase core domain
GDDOIJFM_01715 4.2e-131 K helix_turn _helix lactose operon repressor
GDDOIJFM_01716 4.2e-146 G Periplasmic binding protein domain
GDDOIJFM_01717 8.7e-178 3.6.3.17 G ATPases associated with a variety of cellular activities
GDDOIJFM_01718 5e-142 U Branched-chain amino acid transport system / permease component
GDDOIJFM_01719 1e-185
GDDOIJFM_01720 3e-145 tnp3514b L Winged helix-turn helix
GDDOIJFM_01721 6.2e-48 S LPXTG-motif cell wall anchor domain protein
GDDOIJFM_01722 4.3e-211 ugpC E Belongs to the ABC transporter superfamily
GDDOIJFM_01723 1e-75 K UTRA domain
GDDOIJFM_01724 2.2e-241 ulaA 2.7.1.194 S PTS system sugar-specific permease component
GDDOIJFM_01725 3.7e-45 ulaB 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
GDDOIJFM_01726 2.1e-73 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GDDOIJFM_01727 3.6e-221 2.4.1.166 GT2 M Glycosyltransferase like family 2
GDDOIJFM_01728 5.1e-142 K LytTr DNA-binding domain
GDDOIJFM_01729 3.2e-229 T GHKL domain
GDDOIJFM_01730 1.3e-190 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GDDOIJFM_01732 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GDDOIJFM_01733 2.1e-88 nrdI F Probably involved in ribonucleotide reductase function
GDDOIJFM_01734 2e-42 nrdH O Glutaredoxin
GDDOIJFM_01735 9.8e-123 S Psort location CytoplasmicMembrane, score
GDDOIJFM_01736 0.0 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
GDDOIJFM_01737 5.3e-121 K Helix-turn-helix XRE-family like proteins
GDDOIJFM_01738 2.6e-126 S Protein of unknown function (DUF3990)
GDDOIJFM_01739 7e-71 kcsA U Ion channel
GDDOIJFM_01740 0.0 3.2.1.21 GH3 G Fibronectin type III-like domain
GDDOIJFM_01741 0.0 KLT Protein tyrosine kinase
GDDOIJFM_01742 4.2e-138 O Thioredoxin
GDDOIJFM_01744 4.5e-216 S G5
GDDOIJFM_01745 4.4e-169 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
GDDOIJFM_01746 1.5e-177 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
GDDOIJFM_01747 8.3e-111 S LytR cell envelope-related transcriptional attenuator
GDDOIJFM_01748 9.2e-283 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
GDDOIJFM_01749 2.8e-166 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
GDDOIJFM_01750 0.0
GDDOIJFM_01751 0.0 murJ KLT MviN-like protein
GDDOIJFM_01752 7e-176 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
GDDOIJFM_01753 1.6e-222 parB K Belongs to the ParB family
GDDOIJFM_01754 9.6e-175 parA D CobQ CobB MinD ParA nucleotide binding domain protein
GDDOIJFM_01755 1.2e-123 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
GDDOIJFM_01756 6.6e-93 jag S Putative single-stranded nucleic acids-binding domain
GDDOIJFM_01757 5.8e-183 yidC U Membrane protein insertase, YidC Oxa1 family
GDDOIJFM_01758 1.6e-55 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
GDDOIJFM_01759 2.6e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
GDDOIJFM_01760 3.3e-280 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GDDOIJFM_01761 1.9e-206 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
GDDOIJFM_01762 2.2e-202 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GDDOIJFM_01763 4.2e-83 S Protein of unknown function (DUF721)
GDDOIJFM_01764 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GDDOIJFM_01765 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GDDOIJFM_01766 2.4e-50 S Transmembrane domain of unknown function (DUF3566)
GDDOIJFM_01767 1e-182 lacR K Transcriptional regulator, LacI family
GDDOIJFM_01768 2.3e-13 lacS G Psort location CytoplasmicMembrane, score 10.00
GDDOIJFM_01769 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GDDOIJFM_01770 3.5e-206 V VanZ like family
GDDOIJFM_01771 4.3e-258 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
GDDOIJFM_01772 5.3e-197 S Psort location CytoplasmicMembrane, score
GDDOIJFM_01775 3.8e-122 S Protein of unknown function DUF45
GDDOIJFM_01777 2e-255 S Domain of unknown function (DUF4143)
GDDOIJFM_01778 2.1e-82 dps P Belongs to the Dps family
GDDOIJFM_01779 2.7e-236 ytfL P Transporter associated domain
GDDOIJFM_01780 9.7e-211 S AAA ATPase domain
GDDOIJFM_01781 6.6e-122 cah 4.2.1.1 P Reversible hydration of carbon dioxide
GDDOIJFM_01782 1e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
GDDOIJFM_01783 0.0 trxB2 1.8.1.9 C Thioredoxin domain
GDDOIJFM_01784 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
GDDOIJFM_01785 8.5e-165
GDDOIJFM_01786 1.4e-102 S Uncharacterised protein conserved in bacteria (DUF2194)
GDDOIJFM_01787 8.4e-210 S Uncharacterised protein conserved in bacteria (DUF2194)
GDDOIJFM_01788 5.5e-280 pelF GT4 M Domain of unknown function (DUF3492)
GDDOIJFM_01789 1.2e-280 pelG S Putative exopolysaccharide Exporter (EPS-E)
GDDOIJFM_01790 0.0 cotH M CotH kinase protein
GDDOIJFM_01791 4.1e-158 P VTC domain
GDDOIJFM_01792 4.2e-110 S Domain of unknown function (DUF4956)
GDDOIJFM_01793 0.0 yliE T Putative diguanylate phosphodiesterase
GDDOIJFM_01794 1e-125 S AAA domain
GDDOIJFM_01795 2.3e-311 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
GDDOIJFM_01796 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
GDDOIJFM_01797 0.0 yjjP S Threonine/Serine exporter, ThrE
GDDOIJFM_01798 1.8e-298 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GDDOIJFM_01799 1.3e-166 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
GDDOIJFM_01800 9.3e-300 S Amidohydrolase family
GDDOIJFM_01801 5.5e-203 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
GDDOIJFM_01802 1.2e-38 S Protein of unknown function (DUF3073)
GDDOIJFM_01803 3.6e-112 K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
GDDOIJFM_01804 1.3e-207 2.7.13.3 T Histidine kinase
GDDOIJFM_01805 3.7e-220 EGP Major Facilitator Superfamily
GDDOIJFM_01806 1.1e-71 I Sterol carrier protein
GDDOIJFM_01807 2e-168 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
GDDOIJFM_01808 5.5e-228 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GDDOIJFM_01809 4.2e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
GDDOIJFM_01810 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
GDDOIJFM_01811 4.2e-189 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GDDOIJFM_01812 2.3e-133 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GDDOIJFM_01813 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GDDOIJFM_01814 6.6e-120 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
GDDOIJFM_01815 2.2e-125 apl 3.1.3.1 S SNARE associated Golgi protein
GDDOIJFM_01816 7e-284 arc O AAA ATPase forming ring-shaped complexes
GDDOIJFM_01817 3.2e-135 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GDDOIJFM_01818 2.9e-279 manR K PRD domain
GDDOIJFM_01819 3e-72 H Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GDDOIJFM_01820 1.1e-78 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GDDOIJFM_01821 2.1e-46 fruA 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
GDDOIJFM_01822 9.1e-161 G Phosphotransferase System
GDDOIJFM_01823 2.1e-134 alsE 5.1.3.1 G Ribulose-phosphate 3 epimerase family
GDDOIJFM_01824 0.0 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
GDDOIJFM_01825 8.9e-175 hisN 3.1.3.25 G Inositol monophosphatase family
GDDOIJFM_01827 5.4e-286 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
GDDOIJFM_01828 8.1e-42 hup L Belongs to the bacterial histone-like protein family
GDDOIJFM_01829 0.0 S Lysylphosphatidylglycerol synthase TM region
GDDOIJFM_01830 3.3e-280 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
GDDOIJFM_01831 1.3e-111 ykoE S ABC-type cobalt transport system, permease component
GDDOIJFM_01832 1.2e-254 S PGAP1-like protein
GDDOIJFM_01833 3.4e-55
GDDOIJFM_01834 1e-153 S von Willebrand factor (vWF) type A domain
GDDOIJFM_01835 3.3e-189 S von Willebrand factor (vWF) type A domain
GDDOIJFM_01836 1.1e-84
GDDOIJFM_01837 1.3e-163 S Protein of unknown function DUF58
GDDOIJFM_01838 1.1e-187 moxR S ATPase family associated with various cellular activities (AAA)
GDDOIJFM_01839 2.4e-132 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GDDOIJFM_01840 8.1e-85 S LytR cell envelope-related transcriptional attenuator
GDDOIJFM_01841 6.1e-38 K 'Cold-shock' DNA-binding domain
GDDOIJFM_01842 2.7e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
GDDOIJFM_01843 4.2e-33 S Proteins of 100 residues with WXG
GDDOIJFM_01844 4.3e-99
GDDOIJFM_01845 2e-132 KT Response regulator receiver domain protein
GDDOIJFM_01846 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GDDOIJFM_01847 1.7e-66 cspB K 'Cold-shock' DNA-binding domain
GDDOIJFM_01848 3.7e-180 S Protein of unknown function (DUF3027)
GDDOIJFM_01849 8.2e-31 uspA T Belongs to the universal stress protein A family
GDDOIJFM_01850 5.9e-135 uspA T Belongs to the universal stress protein A family
GDDOIJFM_01851 0.0 clpC O ATPase family associated with various cellular activities (AAA)
GDDOIJFM_01852 1.8e-256 codA 3.5.4.1, 3.5.4.21 F Amidohydrolase family
GDDOIJFM_01853 4.9e-279 purR QT Purine catabolism regulatory protein-like family
GDDOIJFM_01855 1.2e-247 proP EGP Sugar (and other) transporter
GDDOIJFM_01856 6.4e-142 3.5.2.10 S Creatinine amidohydrolase
GDDOIJFM_01857 0.0 3.1.3.5 F 5'-nucleotidase, C-terminal domain
GDDOIJFM_01858 2e-224 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
GDDOIJFM_01859 5.9e-261 hisS 6.1.1.21 J Histidyl-tRNA synthetase
GDDOIJFM_01860 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
GDDOIJFM_01861 6.1e-102 S Aminoacyl-tRNA editing domain
GDDOIJFM_01862 3.1e-153 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
GDDOIJFM_01863 5.3e-147 gluB ET Belongs to the bacterial solute-binding protein 3 family
GDDOIJFM_01864 1.2e-110 gluC E Binding-protein-dependent transport system inner membrane component
GDDOIJFM_01865 1e-193 gluD E Binding-protein-dependent transport system inner membrane component
GDDOIJFM_01866 1.1e-289 phoN I PAP2 superfamily
GDDOIJFM_01867 1.3e-111 argO S LysE type translocator
GDDOIJFM_01868 6.3e-287 ydfD EK Alanine-glyoxylate amino-transferase
GDDOIJFM_01870 8.1e-199 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
GDDOIJFM_01871 0.0 helY L DEAD DEAH box helicase
GDDOIJFM_01872 3.4e-250 rarA L Recombination factor protein RarA
GDDOIJFM_01873 6.9e-11 KT Transcriptional regulatory protein, C terminal
GDDOIJFM_01874 2.3e-33 mtrB 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
GDDOIJFM_01875 6.5e-252 EGP Major facilitator Superfamily
GDDOIJFM_01876 3.8e-187 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
GDDOIJFM_01877 2.4e-52
GDDOIJFM_01878 1.4e-54 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
GDDOIJFM_01879 3.1e-47 yhbY J CRS1_YhbY
GDDOIJFM_01880 0.0 ecfA GP ABC transporter, ATP-binding protein
GDDOIJFM_01881 1.3e-93 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GDDOIJFM_01882 6.4e-198 S Glycosyltransferase, group 2 family protein
GDDOIJFM_01883 2.5e-149 C Putative TM nitroreductase
GDDOIJFM_01884 3.2e-141 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
GDDOIJFM_01885 3e-303 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
GDDOIJFM_01886 6.2e-241 lacY P LacY proton/sugar symporter
GDDOIJFM_01887 1.1e-189 K helix_turn _helix lactose operon repressor
GDDOIJFM_01888 1.3e-257 O SERine Proteinase INhibitors
GDDOIJFM_01889 4.5e-191
GDDOIJFM_01890 6.1e-123 K helix_turn_helix, Lux Regulon
GDDOIJFM_01891 1.8e-214 2.7.13.3 T Histidine kinase
GDDOIJFM_01892 7.1e-248 ydjK G Sugar (and other) transporter
GDDOIJFM_01893 5.6e-62 S Thiamine-binding protein
GDDOIJFM_01894 8.7e-145 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
GDDOIJFM_01895 1.8e-231 O AAA domain (Cdc48 subfamily)
GDDOIJFM_01896 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
GDDOIJFM_01897 1.1e-154 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
GDDOIJFM_01898 5.7e-296 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
GDDOIJFM_01899 2.8e-248 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GDDOIJFM_01900 4.6e-211 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GDDOIJFM_01901 5.9e-69 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
GDDOIJFM_01902 4.9e-45 yggT S YGGT family
GDDOIJFM_01903 5.2e-22 tccB2 V DivIVA protein
GDDOIJFM_01904 5.4e-90 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GDDOIJFM_01905 9e-178 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
GDDOIJFM_01906 1.7e-201 K WYL domain
GDDOIJFM_01907 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
GDDOIJFM_01908 3e-34 yneG S Domain of unknown function (DUF4186)
GDDOIJFM_01909 1.8e-167 dkgA 1.1.1.346 C Aldo/keto reductase family
GDDOIJFM_01910 0.0 4.2.1.53 S MCRA family
GDDOIJFM_01911 1.2e-25 L Transposase, Mutator family
GDDOIJFM_01912 3.9e-07
GDDOIJFM_01914 1.4e-10 L HTH-like domain
GDDOIJFM_01915 5e-21 L PFAM Integrase catalytic
GDDOIJFM_01916 1.4e-86
GDDOIJFM_01917 6.8e-67
GDDOIJFM_01918 1.5e-55 L Transposase, Mutator family
GDDOIJFM_01919 5.7e-84 2.7.7.49 L Transposase, Mutator family
GDDOIJFM_01920 3.9e-30 L Transposase
GDDOIJFM_01921 4.9e-275 L PFAM Integrase catalytic
GDDOIJFM_01922 4.8e-45 S AAA ATPase domain
GDDOIJFM_01923 7.1e-103 K Transposase IS116 IS110 IS902
GDDOIJFM_01924 1.9e-261 S Psort location CytoplasmicMembrane, score 9.99
GDDOIJFM_01925 3.2e-69
GDDOIJFM_01926 1.9e-235 wcoI DM Psort location CytoplasmicMembrane, score
GDDOIJFM_01927 9.5e-152
GDDOIJFM_01928 8.5e-171 S G5
GDDOIJFM_01929 1.9e-59 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
GDDOIJFM_01930 7.8e-120 F Domain of unknown function (DUF4916)
GDDOIJFM_01931 2.4e-158 mhpC I Alpha/beta hydrolase family
GDDOIJFM_01932 6.3e-211 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
GDDOIJFM_01933 5.9e-70 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
GDDOIJFM_01934 2.5e-225 S Uncharacterized conserved protein (DUF2183)
GDDOIJFM_01935 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
GDDOIJFM_01936 5.4e-192 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
GDDOIJFM_01937 3.1e-215 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
GDDOIJFM_01938 2.1e-134 glxR K helix_turn_helix, cAMP Regulatory protein
GDDOIJFM_01939 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
GDDOIJFM_01940 4.1e-229 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
GDDOIJFM_01941 1.8e-228 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
GDDOIJFM_01942 2.8e-123 glpR K DeoR C terminal sensor domain
GDDOIJFM_01943 6.6e-253 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
GDDOIJFM_01944 2e-233 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
GDDOIJFM_01945 3.2e-43 gcvR T Belongs to the UPF0237 family
GDDOIJFM_01946 3.2e-253 S UPF0210 protein
GDDOIJFM_01947 7.6e-115 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
GDDOIJFM_01948 1.1e-186 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
GDDOIJFM_01949 1.9e-101
GDDOIJFM_01950 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GDDOIJFM_01951 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GDDOIJFM_01952 0.0 E Transglutaminase-like superfamily
GDDOIJFM_01953 2.5e-239 S Protein of unknown function DUF58
GDDOIJFM_01954 0.0 S Fibronectin type 3 domain
GDDOIJFM_01955 1.6e-221 KLT Protein tyrosine kinase
GDDOIJFM_01956 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
GDDOIJFM_01957 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
GDDOIJFM_01958 1.7e-235 G Major Facilitator Superfamily
GDDOIJFM_01959 1.7e-134 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
GDDOIJFM_01960 1.7e-162 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GDDOIJFM_01961 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GDDOIJFM_01962 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
GDDOIJFM_01963 5.8e-258 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GDDOIJFM_01964 7.5e-123 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GDDOIJFM_01965 3.2e-267 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
GDDOIJFM_01966 1.6e-205 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
GDDOIJFM_01967 1.3e-205 ftsE D Cell division ATP-binding protein FtsE
GDDOIJFM_01968 9.8e-161 ftsX D Part of the ABC transporter FtsEX involved in cellular division
GDDOIJFM_01969 4e-147 usp 3.5.1.28 CBM50 D CHAP domain protein
GDDOIJFM_01970 6.3e-79 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
GDDOIJFM_01971 5.6e-143 pknD ET ABC transporter, substrate-binding protein, family 3
GDDOIJFM_01972 3.4e-169 pknD ET ABC transporter, substrate-binding protein, family 3
GDDOIJFM_01973 4.7e-153 yecS E Binding-protein-dependent transport system inner membrane component
GDDOIJFM_01974 1.4e-150 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
GDDOIJFM_01975 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
GDDOIJFM_01976 3.6e-142 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
GDDOIJFM_01977 4.3e-186 K Periplasmic binding protein domain

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)