ORF_ID e_value Gene_name EC_number CAZy COGs Description
PDGGJEKI_00001 4.5e-255 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PDGGJEKI_00002 4.2e-198 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PDGGJEKI_00003 1.1e-29 yyzM S Protein conserved in bacteria
PDGGJEKI_00004 1.1e-203 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PDGGJEKI_00005 3e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PDGGJEKI_00006 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PDGGJEKI_00007 2.2e-39 yabO J Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
PDGGJEKI_00008 3e-60 divIC D Septum formation initiator
PDGGJEKI_00010 1.1e-234 XK27_09285 3.5.2.6 V Beta-lactamase enzyme family
PDGGJEKI_00011 4.8e-235 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PDGGJEKI_00012 2e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PDGGJEKI_00013 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PDGGJEKI_00026 2.6e-10
PDGGJEKI_00032 6.6e-92 mreC M Involved in formation and maintenance of cell shape
PDGGJEKI_00033 6.1e-83 mreD M rod shape-determining protein MreD
PDGGJEKI_00034 3.2e-84 usp 3.5.1.28 CBM50 S CHAP domain
PDGGJEKI_00035 9.5e-175 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDGGJEKI_00036 1.9e-217 araT 2.6.1.1 E Aminotransferase
PDGGJEKI_00037 1e-139 recO L Involved in DNA repair and RecF pathway recombination
PDGGJEKI_00038 2.7e-183 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PDGGJEKI_00039 8.1e-30 acpP1 IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PDGGJEKI_00040 8.9e-130 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PDGGJEKI_00041 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDGGJEKI_00042 1.1e-275 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PDGGJEKI_00043 2.5e-189 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PDGGJEKI_00044 9.9e-100 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PDGGJEKI_00045 2.5e-294 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PDGGJEKI_00046 1.3e-156 S CHAP domain
PDGGJEKI_00047 1.4e-239 purD 6.3.4.13 F Belongs to the GARS family
PDGGJEKI_00048 3.4e-80 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PDGGJEKI_00049 6.1e-202 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PDGGJEKI_00050 3.2e-175 1.1.1.169 H Ketopantoate reductase
PDGGJEKI_00051 6.2e-32
PDGGJEKI_00052 7.4e-135 J Domain of unknown function (DUF4041)
PDGGJEKI_00053 5.6e-247 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PDGGJEKI_00055 0.0 argS 6.1.1.19 J Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
PDGGJEKI_00056 6.9e-69 argR K Regulates arginine biosynthesis genes
PDGGJEKI_00057 1.6e-55 ymcA 3.6.3.21 S Belongs to the UPF0342 family
PDGGJEKI_00058 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PDGGJEKI_00059 1e-78 S Protein of unknown function (DUF3021)
PDGGJEKI_00060 1.9e-69 K LytTr DNA-binding domain
PDGGJEKI_00062 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PDGGJEKI_00064 3e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PDGGJEKI_00065 2.3e-104 tag 3.2.2.20 L 3-methyladenine DNA glycosylase
PDGGJEKI_00066 8.8e-229 cinA 3.5.1.42 S Belongs to the CinA family
PDGGJEKI_00067 1e-204 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PDGGJEKI_00068 3.9e-66 spxA_2 1.20.4.1 P Belongs to the ArsC family
PDGGJEKI_00074 2.6e-10
PDGGJEKI_00077 1.9e-07
PDGGJEKI_00082 1e-183 L Belongs to the 'phage' integrase family
PDGGJEKI_00083 3.5e-28 S Domain of unknown function (DUF3173)
PDGGJEKI_00084 3.4e-67
PDGGJEKI_00085 2.5e-192 L Replication initiation factor
PDGGJEKI_00086 7.2e-75
PDGGJEKI_00087 6.2e-76 K transcriptional
PDGGJEKI_00088 1.5e-218
PDGGJEKI_00089 8.9e-125 V ABC transporter
PDGGJEKI_00090 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDGGJEKI_00091 1.1e-236 pepS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
PDGGJEKI_00092 5.5e-36 XK27_02060 S Transglycosylase associated protein
PDGGJEKI_00093 3.9e-72 badR K Transcriptional regulator, marr family
PDGGJEKI_00094 3.2e-95 S reductase
PDGGJEKI_00096 9.2e-289 ahpF O alkyl hydroperoxide reductase
PDGGJEKI_00097 3.2e-106 ahpC 1.11.1.15 O alkyl hydroperoxide reductase
PDGGJEKI_00098 7.4e-138 rpsB J Belongs to the universal ribosomal protein uS2 family
PDGGJEKI_00099 1e-182 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PDGGJEKI_00100 1.6e-82 S Putative small multi-drug export protein
PDGGJEKI_00101 1.8e-75 ctsR K Belongs to the CtsR family
PDGGJEKI_00102 0.0 clpC O Belongs to the ClpA ClpB family
PDGGJEKI_00103 2.2e-227 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PDGGJEKI_00104 2.6e-225 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PDGGJEKI_00105 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PDGGJEKI_00106 1.1e-138 S SseB protein N-terminal domain
PDGGJEKI_00107 3.3e-112 cysE 2.3.1.30 E serine acetyltransferase
PDGGJEKI_00109 2.4e-256 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDGGJEKI_00110 2.7e-67 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PDGGJEKI_00112 4e-253 L Domain of unknown function (DUF4368)
PDGGJEKI_00114 1.9e-72 S Replication-relaxation
PDGGJEKI_00115 1.2e-188 yukA S Type IV secretion-system coupling protein DNA-binding domain
PDGGJEKI_00116 1.5e-94 KT MT-A70
PDGGJEKI_00118 4.5e-10
PDGGJEKI_00121 1.6e-189 sthIM 2.1.1.72 L DNA methylase
PDGGJEKI_00122 0.0 res_1 3.1.21.5 S DEAD-like helicases superfamily
PDGGJEKI_00123 2.7e-190 L AAA ATPase domain
PDGGJEKI_00124 2.3e-102 3.6.4.12 L AAA domain
PDGGJEKI_00127 3.7e-134 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDGGJEKI_00128 6e-91 yacP S RNA-binding protein containing a PIN domain
PDGGJEKI_00129 4.5e-152 degV S DegV family
PDGGJEKI_00131 5.1e-22 K Transcriptional
PDGGJEKI_00132 2e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PDGGJEKI_00133 3.6e-64 rpsI J Belongs to the universal ribosomal protein uS9 family
PDGGJEKI_00134 4.4e-181 int L Belongs to the 'phage' integrase family
PDGGJEKI_00135 8.1e-39 S Helix-turn-helix domain
PDGGJEKI_00136 4.3e-171 isp2 S pathogenesis
PDGGJEKI_00137 4.4e-30
PDGGJEKI_00138 5.6e-248
PDGGJEKI_00139 0.0 yddE S AAA-like domain
PDGGJEKI_00140 8.2e-67 S TcpE family
PDGGJEKI_00141 3.2e-33
PDGGJEKI_00142 1.7e-158 S Conjugative transposon protein TcpC
PDGGJEKI_00143 5.1e-88
PDGGJEKI_00144 4.3e-33
PDGGJEKI_00145 2.2e-224 K Replication initiation factor
PDGGJEKI_00146 4e-277 ydcQ D Ftsk spoiiie family protein
PDGGJEKI_00147 2.3e-73
PDGGJEKI_00148 1.5e-41
PDGGJEKI_00150 9.4e-38 K Bacteriophage CI repressor helix-turn-helix domain
PDGGJEKI_00151 2e-07 S FRG domain
PDGGJEKI_00154 2.8e-133 E IrrE N-terminal-like domain
PDGGJEKI_00155 3.1e-106 K Peptidase S24-like protein
PDGGJEKI_00156 7.1e-19 L Transposase (IS116 IS110 IS902 family)
PDGGJEKI_00160 1.1e-210 spaB S Lantibiotic dehydratase, C terminus
PDGGJEKI_00161 1.9e-176 spaT V ATPases associated with a variety of cellular activities
PDGGJEKI_00162 1.1e-87 spaC2 V Lanthionine synthetase C-like protein
PDGGJEKI_00163 8.3e-38
PDGGJEKI_00164 9.7e-132 O Subtilase family
PDGGJEKI_00165 4.2e-84 KT Transcriptional regulatory protein, C terminal
PDGGJEKI_00166 5e-90 2.7.13.3 T His Kinase A (phosphoacceptor) domain
PDGGJEKI_00167 1e-123 L Transposase
PDGGJEKI_00169 1.3e-51 V ABC-2 family transporter protein
PDGGJEKI_00170 1.6e-83 mutF V AAA domain, putative AbiEii toxin, Type IV TA system
PDGGJEKI_00171 3.2e-80 copY K Copper transport repressor, CopY TcrY family
PDGGJEKI_00172 0.0 3.6.3.4 P P-type ATPase
PDGGJEKI_00174 7.6e-101 cadD P Cadmium resistance transporter
PDGGJEKI_00175 4.5e-55 cadC K transcriptional regulator, ArsR family
PDGGJEKI_00176 1.6e-16
PDGGJEKI_00177 9.2e-50 yiiE S protein homotetramerization
PDGGJEKI_00178 7.6e-18
PDGGJEKI_00179 1.5e-29 K Helix-turn-helix domain
PDGGJEKI_00181 4.6e-149 srtB 3.4.22.70 S Sortase family
PDGGJEKI_00182 1.3e-232 capA M Bacterial capsule synthesis protein
PDGGJEKI_00183 6.1e-39 gcvR T UPF0237 protein
PDGGJEKI_00184 6.6e-243 XK27_08635 S UPF0210 protein
PDGGJEKI_00185 1.4e-130 ais G Phosphoglycerate mutase
PDGGJEKI_00186 5.3e-139 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
PDGGJEKI_00187 7.2e-101 acmA 3.2.1.17, 3.4.17.14, 3.5.1.28 NU Muramidase (Flagellum-specific)
PDGGJEKI_00188 8.3e-185 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PDGGJEKI_00189 8.2e-64 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PDGGJEKI_00190 6e-303 dnaK O Heat shock 70 kDa protein
PDGGJEKI_00191 7.5e-104 thiJ-2 3.5.1.124 S DJ-1/PfpI family
PDGGJEKI_00192 8e-189 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PDGGJEKI_00193 1.1e-138 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PDGGJEKI_00194 1.5e-135 thiD 2.7.1.35, 2.7.1.49, 2.7.4.7 H phosphomethylpyrimidine kinase
PDGGJEKI_00195 7.4e-80 hmpT S cog cog4720
PDGGJEKI_00208 3.9e-87 sigH K DNA-templated transcription, initiation
PDGGJEKI_00209 3.1e-139 ykuT M mechanosensitive ion channel
PDGGJEKI_00210 5.2e-229 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PDGGJEKI_00211 1.3e-70 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PDGGJEKI_00212 1.7e-309 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PDGGJEKI_00213 6.2e-80 XK27_03960 S Protein of unknown function (DUF3013)
PDGGJEKI_00214 3.5e-74 mutT3 3.6.1.13, 3.6.1.55 L NUDIX domain
PDGGJEKI_00215 1.1e-175 prmA J Ribosomal protein L11 methyltransferase
PDGGJEKI_00216 1.3e-131 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PDGGJEKI_00217 0.0 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PDGGJEKI_00218 3.1e-83 nrdI F Belongs to the NrdI family
PDGGJEKI_00219 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PDGGJEKI_00220 3.3e-74 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PDGGJEKI_00221 0.0 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
PDGGJEKI_00222 2.5e-236 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PDGGJEKI_00223 3.3e-112 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PDGGJEKI_00224 4.2e-110 fnr5 K Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
PDGGJEKI_00225 4.2e-193 yhjX P Major Facilitator
PDGGJEKI_00226 9.2e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PDGGJEKI_00227 4.7e-84 V VanZ like family
PDGGJEKI_00228 1.7e-165 D nuclear chromosome segregation
PDGGJEKI_00230 2.8e-17 KT phosphorelay signal transduction system
PDGGJEKI_00231 1.8e-120 agrA KT response regulator
PDGGJEKI_00232 3.1e-08 comD 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDGGJEKI_00233 1.5e-109 comD 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDGGJEKI_00235 5.4e-25
PDGGJEKI_00237 7.7e-12
PDGGJEKI_00238 9.3e-129 V ABC transporter
PDGGJEKI_00239 2.9e-49
PDGGJEKI_00240 2.2e-123 glnQ E abc transporter atp-binding protein
PDGGJEKI_00241 4.2e-273 glnP P ABC transporter
PDGGJEKI_00242 1.5e-152 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PDGGJEKI_00243 6.3e-18 S Protein of unknown function (DUF3021)
PDGGJEKI_00244 2e-124 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PDGGJEKI_00245 1.6e-181 tagO 2.7.8.33, 2.7.8.35 M transferase
PDGGJEKI_00246 6.3e-137 sufC O ABC-type transport system involved in Fe-S cluster assembly, ATPase component
PDGGJEKI_00247 2e-233 sufD O assembly protein SufD
PDGGJEKI_00248 1e-237 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PDGGJEKI_00249 2.7e-73 nifU C SUF system FeS assembly protein, NifU family
PDGGJEKI_00250 2.9e-273 sufB O assembly protein SufB
PDGGJEKI_00251 2.7e-26
PDGGJEKI_00252 7.3e-158 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PDGGJEKI_00253 2.8e-182 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PDGGJEKI_00254 2e-71 adcR K transcriptional
PDGGJEKI_00255 2.4e-135 adcC P ABC transporter, ATP-binding protein
PDGGJEKI_00256 6.6e-129 adcB P ABC transporter (Permease
PDGGJEKI_00257 8.1e-163 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
PDGGJEKI_00258 0.0 ptsG 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
PDGGJEKI_00259 7.6e-157 rgfB 3.1.3.90 L Endonuclease/Exonuclease/phosphatase family
PDGGJEKI_00260 1.6e-257 pgi 5.3.1.9 G Belongs to the GPI family
PDGGJEKI_00261 1.6e-149 Z012_04635 K sequence-specific DNA binding
PDGGJEKI_00262 2.3e-282 V ABC transporter
PDGGJEKI_00263 6.1e-126 yeeN K transcriptional regulatory protein
PDGGJEKI_00264 7.7e-47 yajC U protein transport
PDGGJEKI_00265 5.3e-141 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PDGGJEKI_00266 9.3e-144 cdsA 2.7.7.41 S Belongs to the CDS family
PDGGJEKI_00267 2.1e-230 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PDGGJEKI_00268 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PDGGJEKI_00269 0.0 WQ51_06230 S ABC transporter substrate binding protein
PDGGJEKI_00270 1.4e-142 cmpC S abc transporter atp-binding protein
PDGGJEKI_00271 8.5e-30 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PDGGJEKI_00272 4.1e-287 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PDGGJEKI_00274 1e-42
PDGGJEKI_00275 7.6e-55 S TM2 domain
PDGGJEKI_00276 1.8e-164 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PDGGJEKI_00277 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PDGGJEKI_00278 6.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PDGGJEKI_00279 2.8e-24 secE U Belongs to the SecE SEC61-gamma family
PDGGJEKI_00280 8.4e-96 nusG K Participates in transcription elongation, termination and antitermination
PDGGJEKI_00281 3.6e-68 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I phosphatidate phosphatase activity
PDGGJEKI_00282 3e-145 cof S Sucrose-6F-phosphate phosphohydrolase
PDGGJEKI_00283 3.6e-132 glcR K transcriptional regulator (DeoR family)
PDGGJEKI_00284 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDGGJEKI_00285 2.3e-24 yjdF S Protein of unknown function (DUF2992)
PDGGJEKI_00286 2.3e-148 cylA V abc transporter atp-binding protein
PDGGJEKI_00287 1.2e-133 cylB V ABC-2 type transporter
PDGGJEKI_00288 1e-73 K COG3279 Response regulator of the LytR AlgR family
PDGGJEKI_00289 9.9e-31 S Protein of unknown function (DUF3021)
PDGGJEKI_00290 8.7e-125 mta K Transcriptional
PDGGJEKI_00291 2.5e-121 yhcA V abc transporter atp-binding protein
PDGGJEKI_00292 1e-216 macB_2 V FtsX-like permease family
PDGGJEKI_00293 3.9e-265 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDGGJEKI_00294 5.3e-150 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PDGGJEKI_00295 2.2e-73 yhaI S Protein of unknown function (DUF805)
PDGGJEKI_00296 3.8e-254 pepC 3.4.22.40 E aminopeptidase
PDGGJEKI_00297 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PDGGJEKI_00298 1.3e-108 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PDGGJEKI_00299 4e-95 ypsA S Belongs to the UPF0398 family
PDGGJEKI_00300 9.6e-50 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PDGGJEKI_00301 1.6e-221 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PDGGJEKI_00302 1.2e-277 mapZ D Early cell division protein that marks the future cell division site and supports proper FtsZ ring positioning
PDGGJEKI_00303 0.0 snf 2.7.11.1 L Superfamily II DNA RNA helicases, SNF2 family'
PDGGJEKI_00304 9.6e-23
PDGGJEKI_00305 1.7e-254 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PDGGJEKI_00306 4.5e-88 XK27_09675 K histone acetyltransferase HPA2 and related acetyltransferases
PDGGJEKI_00307 6.5e-303 mltG ADL Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PDGGJEKI_00308 1.2e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDGGJEKI_00309 7.7e-166 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PDGGJEKI_00310 9.2e-46 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PDGGJEKI_00311 1.5e-127 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDGGJEKI_00312 7.3e-94 XK27_09705 6.1.1.14 S HD superfamily hydrolase
PDGGJEKI_00313 1.4e-100 ybhL S Belongs to the BI1 family
PDGGJEKI_00314 5.5e-12 ycdA S Domain of unknown function (DUF4352)
PDGGJEKI_00315 2.1e-243 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PDGGJEKI_00316 1.8e-90 K transcriptional regulator
PDGGJEKI_00317 1.6e-36 yneF S UPF0154 protein
PDGGJEKI_00318 1.5e-149 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PDGGJEKI_00319 1.3e-184 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PDGGJEKI_00320 8.7e-98 XK27_09740 S Phosphoesterase
PDGGJEKI_00321 8.3e-87 ykuL S CBS domain
PDGGJEKI_00322 2.2e-134 xerD L tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site
PDGGJEKI_00323 1.8e-122 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PDGGJEKI_00324 6.1e-92 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PDGGJEKI_00325 3.4e-132 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PDGGJEKI_00326 1.4e-13 yidD M Could be involved in insertion of integral membrane proteins into the membrane
PDGGJEKI_00327 4.2e-259 trkH P Cation transport protein
PDGGJEKI_00328 5e-246 trkA P Potassium transporter peripheral membrane component
PDGGJEKI_00329 8.2e-93 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PDGGJEKI_00330 2.7e-89 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PDGGJEKI_00331 1.5e-107 bcrC 3.6.1.27 I Membrane-associated phospholipid phosphatase
PDGGJEKI_00332 5.1e-154 K sequence-specific DNA binding
PDGGJEKI_00333 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PDGGJEKI_00334 1.3e-54 yhaI L Membrane
PDGGJEKI_00335 9.6e-253 S Domain of unknown function (DUF4173)
PDGGJEKI_00336 6.3e-138 ET ABC transporter substrate-binding protein
PDGGJEKI_00337 1.4e-164 metQ M Belongs to the NlpA lipoprotein family
PDGGJEKI_00338 2e-263 dapE 3.5.1.18 E COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases
PDGGJEKI_00339 6.4e-188 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PDGGJEKI_00340 8e-99 metI P ABC transporter (Permease
PDGGJEKI_00341 6.1e-211 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
PDGGJEKI_00342 2.7e-157 salL 2.5.1.63, 2.5.1.94 S S-adenosyl-l-methionine hydroxide adenosyltransferase
PDGGJEKI_00343 5.2e-93 S UPF0397 protein
PDGGJEKI_00344 1.3e-307 ykoD P abc transporter atp-binding protein
PDGGJEKI_00345 2e-149 cbiQ P cobalt transport
PDGGJEKI_00346 4.2e-121 ktrA P COG0569 K transport systems, NAD-binding component
PDGGJEKI_00347 3.7e-233 P COG0168 Trk-type K transport systems, membrane components
PDGGJEKI_00348 3.4e-129 rsmG 2.1.1.170 J Ribosomal RNA small subunit methyltransferase G
PDGGJEKI_00349 1.8e-90 yceD K metal-binding, possibly nucleic acid-binding protein
PDGGJEKI_00350 7.9e-123 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDGGJEKI_00351 4.6e-280 T PhoQ Sensor
PDGGJEKI_00352 3e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PDGGJEKI_00353 8.8e-215 dnaB L Replication initiation and membrane attachment
PDGGJEKI_00354 4.4e-166 dnaI L Primosomal protein DnaI
PDGGJEKI_00355 2.6e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PDGGJEKI_00356 4.5e-109
PDGGJEKI_00357 1.4e-229 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PDGGJEKI_00358 2.5e-62 manO S protein conserved in bacteria
PDGGJEKI_00359 3.3e-169 manN G PTS system mannose fructose sorbose family IID component
PDGGJEKI_00360 1.2e-117 manM G pts system
PDGGJEKI_00361 4.9e-174 manL 2.7.1.191 G pts system
PDGGJEKI_00362 5e-66 manO S Protein conserved in bacteria
PDGGJEKI_00363 9.1e-159 manN G PTS system mannose fructose sorbose family IID component
PDGGJEKI_00364 4.8e-132 manY G pts system
PDGGJEKI_00365 1.4e-168 manL 2.7.1.191 G pts system
PDGGJEKI_00366 7.3e-135 XK27_00940 1.2.1.70, 3.5.1.9 S Metal-dependent hydrolase
PDGGJEKI_00367 3.5e-154 yitU 3.1.3.104 S hydrolases of the HAD superfamily
PDGGJEKI_00368 1.6e-247 pbuO S permease
PDGGJEKI_00369 1.2e-76 ydiB 2.7.1.221, 5.1.1.1 M ATPase or kinase
PDGGJEKI_00370 1.8e-90 XK27_05885 2.3.1.82 M phosphinothricin N-acetyltransferase activity
PDGGJEKI_00371 5.7e-188 brpA K Transcriptional
PDGGJEKI_00372 2.3e-81 rimP S Required for maturation of 30S ribosomal subunits
PDGGJEKI_00373 4e-199 nusA K Participates in both transcription termination and antitermination
PDGGJEKI_00374 1e-47 ylxR K Nucleic-acid-binding protein implicated in transcription termination
PDGGJEKI_00375 1.4e-41 ylxQ J ribosomal protein
PDGGJEKI_00376 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PDGGJEKI_00377 5.6e-56 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PDGGJEKI_00378 1e-99 yvdD 3.2.2.10 S Belongs to the LOG family
PDGGJEKI_00379 1.6e-266 murE 6.3.2.13, 6.3.2.7 M to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PDGGJEKI_00380 8.9e-255 ytgP S Membrane protein involved in the export of O-antigen and teichoic acid
PDGGJEKI_00381 0.0 pacL 3.6.3.8, 3.6.3.9 P cation transport ATPase
PDGGJEKI_00382 1.4e-201 metB 2.5.1.48, 4.4.1.8 E cystathionine
PDGGJEKI_00383 5.3e-220 malY 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PDGGJEKI_00384 3.1e-295 3.2.1.26, 3.2.1.65 GH32 G Belongs to the glycosyl hydrolase 32 family
PDGGJEKI_00385 0.0 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 G Belongs to the glycosyl hydrolase 68 family
PDGGJEKI_00386 5.7e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PDGGJEKI_00387 3.7e-105 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PDGGJEKI_00388 3.2e-72 ylbF S Belongs to the UPF0342 family
PDGGJEKI_00389 7.1e-46 ylbG S UPF0298 protein
PDGGJEKI_00390 5.3e-212 livJ E COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component
PDGGJEKI_00391 4.2e-145 livH E Belongs to the binding-protein-dependent transport system permease family
PDGGJEKI_00392 4.9e-139 livM E Belongs to the binding-protein-dependent transport system permease family
PDGGJEKI_00393 1.1e-136 livG E COG0411 ABC-type branched-chain amino acid transport systems, ATPase component
PDGGJEKI_00394 5.6e-124 livF E COG0410 ABC-type branched-chain amino acid transport systems, ATPase component
PDGGJEKI_00395 2.3e-111 acuB S CBS domain
PDGGJEKI_00396 6.3e-168 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PDGGJEKI_00397 2.2e-108 yvyE 3.4.13.9 S YigZ family
PDGGJEKI_00398 2.7e-249 comFA L Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
PDGGJEKI_00399 3.8e-82 comFC K competence protein
PDGGJEKI_00400 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PDGGJEKI_00408 3.9e-165 ppaC 3.6.1.1 C inorganic pyrophosphatase
PDGGJEKI_00409 1.1e-102 S Domain of unknown function (DUF1803)
PDGGJEKI_00410 7.8e-102 ygaC J Belongs to the UPF0374 family
PDGGJEKI_00411 8.3e-137 recX 2.4.1.337 GT4 S Regulatory protein RecX
PDGGJEKI_00412 2e-247 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDGGJEKI_00413 3e-192 asnA 6.3.1.1 E aspartate--ammonia ligase
PDGGJEKI_00414 3.1e-256 lysC 2.7.2.4 E Belongs to the aspartokinase family
PDGGJEKI_00415 8.1e-114 S HAD hydrolase, family IA, variant 3
PDGGJEKI_00416 3.1e-139 phaB 5.3.3.14, 5.3.3.18 I Belongs to the enoyl-CoA hydratase isomerase family
PDGGJEKI_00417 1.5e-71 marR K Transcriptional regulator, MarR family
PDGGJEKI_00418 7e-170 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PDGGJEKI_00419 3.3e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PDGGJEKI_00420 5.8e-172 fabK 1.3.1.9 S 2-Nitropropane dioxygenase
PDGGJEKI_00421 1.2e-161 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
PDGGJEKI_00422 1.8e-125 IQ reductase
PDGGJEKI_00423 1.3e-232 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PDGGJEKI_00424 1.6e-53 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PDGGJEKI_00425 1.5e-71 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PDGGJEKI_00426 5.4e-256 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
PDGGJEKI_00427 1.6e-157 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PDGGJEKI_00428 5.1e-139 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
PDGGJEKI_00429 4.7e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PDGGJEKI_00430 7.1e-207 rny D Endoribonuclease that initiates mRNA decay
PDGGJEKI_00431 2e-124 fruR K transcriptional
PDGGJEKI_00432 3.8e-165 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PDGGJEKI_00433 0.0 fruA 2.7.1.202 G phosphotransferase system
PDGGJEKI_00434 1.6e-257 gor 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PDGGJEKI_00435 8.7e-229 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PDGGJEKI_00437 8.8e-212 iscS2 2.8.1.7 E Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes
PDGGJEKI_00438 7.5e-225 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PDGGJEKI_00439 3.5e-293 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
PDGGJEKI_00440 2e-255 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
PDGGJEKI_00441 1.6e-94 2.3.1.128 K acetyltransferase
PDGGJEKI_00442 4.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
PDGGJEKI_00443 1.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PDGGJEKI_00444 4.4e-129 ydaF_2 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PDGGJEKI_00447 2.3e-11
PDGGJEKI_00448 5e-63 WQ51_03320 S cog cog4835
PDGGJEKI_00449 1.5e-147 XK27_08360 S EDD domain protein, DegV family
PDGGJEKI_00450 3.3e-138 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PDGGJEKI_00451 1.7e-218 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PDGGJEKI_00452 0.0 yfmR S abc transporter atp-binding protein
PDGGJEKI_00453 1.3e-26 U response to pH
PDGGJEKI_00454 5.3e-128 3.6.1.13, 3.6.1.55 F AdP-ribose pyrophosphatase
PDGGJEKI_00455 1.5e-211 nadD 2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55 H adenylyltransferase
PDGGJEKI_00456 1.4e-256 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
PDGGJEKI_00457 5.1e-277 S Psort location CytoplasmicMembrane, score
PDGGJEKI_00458 6.7e-69 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PDGGJEKI_00459 3.3e-74 K DNA-binding transcription factor activity
PDGGJEKI_00460 0.0 lmrA1 V abc transporter atp-binding protein
PDGGJEKI_00461 0.0 lmrA2 V abc transporter atp-binding protein
PDGGJEKI_00462 6.7e-113 K Acetyltransferase (GNAT) family
PDGGJEKI_00463 1.3e-111 2.7.6.5 S Region found in RelA / SpoT proteins
PDGGJEKI_00464 1.7e-117 T response regulator
PDGGJEKI_00465 1.1e-215 sptS 2.7.13.3 T Histidine kinase
PDGGJEKI_00466 1.7e-131 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PDGGJEKI_00467 1.9e-90 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PDGGJEKI_00468 5e-159 cvfB S Protein conserved in bacteria
PDGGJEKI_00469 3.7e-34 yozE S Belongs to the UPF0346 family
PDGGJEKI_00470 1.3e-126 sip M LysM domain protein
PDGGJEKI_00471 2.6e-189 phoH T phosphate starvation-inducible protein PhoH
PDGGJEKI_00475 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PDGGJEKI_00476 7.6e-160 S reductase
PDGGJEKI_00477 4.7e-168 K transcriptional regulator (lysR family)
PDGGJEKI_00478 7.1e-63 S CAAX protease self-immunity
PDGGJEKI_00479 5.8e-40 S CAAX amino terminal protease family protein
PDGGJEKI_00480 4.4e-256 2.7.13.3, 2.7.7.7, 5.4.99.21 D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
PDGGJEKI_00481 7.2e-175 coiA 3.6.4.12 S Competence protein
PDGGJEKI_00482 0.0 pepF E oligoendopeptidase F
PDGGJEKI_00483 3.8e-213 oxlT P COG0477 Permeases of the major facilitator superfamily
PDGGJEKI_00484 6.1e-120 yrrM 2.1.1.104 S O-Methyltransferase
PDGGJEKI_00485 6.2e-165 prsA 3.1.3.16, 5.2.1.8 O peptidyl-prolyl cis-trans isomerase activity
PDGGJEKI_00486 2.7e-85 yxjI S LURP-one-related
PDGGJEKI_00487 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PDGGJEKI_00488 9.6e-120 K sequence-specific DNA binding
PDGGJEKI_00489 7.7e-09
PDGGJEKI_00491 0.0 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
PDGGJEKI_00492 3.8e-216 L the current gene model (or a revised gene model) may contain a frame shift
PDGGJEKI_00493 1.4e-136 agrA KT response regulator
PDGGJEKI_00495 2.4e-133 agrA KT phosphorelay signal transduction system
PDGGJEKI_00496 4.6e-228 2.7.13.3 T GHKL domain
PDGGJEKI_00497 1.5e-14
PDGGJEKI_00498 0.0 vanY 3.4.17.14, 3.5.1.28 M D-alanyl-D-alanine carboxypeptidase
PDGGJEKI_00499 1.2e-140 cnhA 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
PDGGJEKI_00500 2.6e-222 mtnE 2.6.1.83 E mutations do not affect methionine salvage in vivo however
PDGGJEKI_00501 5.2e-179 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PDGGJEKI_00502 8.6e-218 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PDGGJEKI_00503 8.7e-128 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
PDGGJEKI_00504 3e-204 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
PDGGJEKI_00505 2.7e-128 yxkH G deacetylase
PDGGJEKI_00506 6.8e-237 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
PDGGJEKI_00507 1.1e-153 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PDGGJEKI_00508 2.1e-144 rarD S Transporter
PDGGJEKI_00509 2.2e-15 T peptidase
PDGGJEKI_00510 3e-14 coiA 3.6.4.12 S Competence protein
PDGGJEKI_00511 4.5e-103 S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PDGGJEKI_00514 1.4e-94
PDGGJEKI_00515 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PDGGJEKI_00516 5e-291 S AAA ATPase domain
PDGGJEKI_00517 2.4e-16 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDGGJEKI_00518 1.8e-114 atpB C it plays a direct role in the translocation of protons across the membrane
PDGGJEKI_00519 9.5e-78 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PDGGJEKI_00520 1e-85 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDGGJEKI_00521 1e-279 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PDGGJEKI_00522 4.8e-157 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PDGGJEKI_00523 7.9e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PDGGJEKI_00524 2.6e-68 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PDGGJEKI_00525 1.6e-217 ftsW D Belongs to the SEDS family
PDGGJEKI_00526 2.8e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PDGGJEKI_00527 9.9e-135 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PDGGJEKI_00528 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PDGGJEKI_00530 6.3e-111 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PDGGJEKI_00531 1.7e-159 holB 2.7.7.7 L dna polymerase iii
PDGGJEKI_00532 5.2e-134 yaaT S stage 0 sporulation protein
PDGGJEKI_00533 1.2e-54 yabA L Involved in initiation control of chromosome replication
PDGGJEKI_00534 3.1e-156 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PDGGJEKI_00535 2.3e-226 amt P Ammonium Transporter
PDGGJEKI_00536 1.9e-53 glnB K Belongs to the P(II) protein family
PDGGJEKI_00537 3.5e-104 mur1 3.4.17.14, 3.5.1.28 NU amidase activity
PDGGJEKI_00538 1.9e-144 XK27_04800 S Sucrose-6F-phosphate phosphohydrolase
PDGGJEKI_00539 3.4e-81 S Bacterial inner membrane protein
PDGGJEKI_00540 1.2e-112 3.4.17.14, 3.5.1.28 NU amidase activity
PDGGJEKI_00541 4.2e-292 nptA P COG1283 Na phosphate symporter
PDGGJEKI_00542 8.3e-210 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PDGGJEKI_00543 4.8e-219 S membrane
PDGGJEKI_00544 3.7e-176 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PDGGJEKI_00545 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PDGGJEKI_00546 1.7e-38 ynzC S UPF0291 protein
PDGGJEKI_00547 6e-255 cycA E permease
PDGGJEKI_00548 3e-07 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PDGGJEKI_00549 0.0 pts33BCA 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
PDGGJEKI_00550 1.6e-140 ppiA 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PDGGJEKI_00554 3.7e-157 V AAA domain, putative AbiEii toxin, Type IV TA system
PDGGJEKI_00555 1.4e-56 S ABC-2 type transporter
PDGGJEKI_00556 1.8e-96
PDGGJEKI_00558 1.2e-166 fhuR K transcriptional regulator (lysR family)
PDGGJEKI_00559 4.4e-77 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PDGGJEKI_00560 1.1e-161 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PDGGJEKI_00561 4.8e-88 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PDGGJEKI_00562 5.2e-221 pyrP F uracil Permease
PDGGJEKI_00563 1.3e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PDGGJEKI_00564 9.3e-211 carA 6.3.5.5 F carbamoyl-phosphate synthetase glutamine chain
PDGGJEKI_00565 0.0 carB 6.3.5.5 F carbamoyl-phosphate synthetase ammonia chain
PDGGJEKI_00566 6.4e-126 2.1.1.223 S Putative SAM-dependent methyltransferase
PDGGJEKI_00567 1.5e-180 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDGGJEKI_00568 2e-121 macB V ABC transporter, ATP-binding protein
PDGGJEKI_00569 2.1e-211 V permease protein
PDGGJEKI_00570 3.3e-78 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PDGGJEKI_00571 2.1e-45 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PDGGJEKI_00572 0.0 mdlB V abc transporter atp-binding protein
PDGGJEKI_00573 0.0 lmrA V abc transporter atp-binding protein
PDGGJEKI_00574 7.3e-197 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PDGGJEKI_00575 2e-121 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PDGGJEKI_00576 1.2e-196 yceA S Belongs to the UPF0176 family
PDGGJEKI_00577 1.6e-28 XK27_00085 K Transcriptional
PDGGJEKI_00578 4.7e-21
PDGGJEKI_00579 2.9e-134 deoD_1 2.4.2.3 F Phosphorylase superfamily
PDGGJEKI_00580 8.7e-114 S VIT family
PDGGJEKI_00581 2.6e-138 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PDGGJEKI_00582 5.9e-216 hipO 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
PDGGJEKI_00583 6.2e-194 ald 1.4.1.1 C Belongs to the AlaDH PNT family
PDGGJEKI_00585 5e-137 E Alpha beta hydrolase
PDGGJEKI_00586 2.8e-246 merA 1.16.1.1 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PDGGJEKI_00587 3.8e-138 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
PDGGJEKI_00588 2e-169 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PDGGJEKI_00589 1.2e-164 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PDGGJEKI_00590 6.8e-184 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PDGGJEKI_00591 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PDGGJEKI_00592 1.3e-257 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PDGGJEKI_00593 5.9e-97 nudF 3.6.1.13 L AdP-ribose pyrophosphatase
PDGGJEKI_00594 2.9e-25
PDGGJEKI_00595 7.7e-118 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PDGGJEKI_00596 0.0 U protein secretion
PDGGJEKI_00597 5.2e-192 dgs 2.4.1.208 GT4 M Glycosyltransferase, group 1 family protein
PDGGJEKI_00598 5.4e-245 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
PDGGJEKI_00599 1.7e-13
PDGGJEKI_00600 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PDGGJEKI_00601 2.2e-160 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
PDGGJEKI_00602 2.5e-200 S Protein of unknown function (DUF3114)
PDGGJEKI_00603 4.1e-29 pspC KT PspC domain protein
PDGGJEKI_00604 5.2e-119 yqfA K protein, Hemolysin III
PDGGJEKI_00605 2.6e-68 K hmm pf08876
PDGGJEKI_00606 7.7e-225 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PDGGJEKI_00607 1e-210 mvaS 2.3.3.10 I synthase
PDGGJEKI_00608 3.8e-167 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PDGGJEKI_00609 2.6e-91 folA 1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PDGGJEKI_00610 9.7e-22
PDGGJEKI_00611 2.6e-225 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PDGGJEKI_00612 8.7e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
PDGGJEKI_00613 4.4e-250 mmuP E amino acid
PDGGJEKI_00614 9.4e-175 mmuM 1.5.1.20, 2.1.1.10 H Homocysteine
PDGGJEKI_00615 2.2e-30 S Domain of unknown function (DUF1912)
PDGGJEKI_00616 4.8e-13 L Helix-hairpin-helix DNA-binding motif class 1
PDGGJEKI_00617 7.4e-107 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PDGGJEKI_00618 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PDGGJEKI_00619 4.2e-147 aadK G adenylyltransferase
PDGGJEKI_00620 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PDGGJEKI_00621 4.5e-199 ilvE 2.6.1.42 E Aminotransferase
PDGGJEKI_00624 2.5e-204 rpsA 1.17.7.4 J ribosomal protein S1
PDGGJEKI_00627 5.5e-107 S Domain of Unknown Function with PDB structure (DUF3862)
PDGGJEKI_00628 2.4e-116 M Pfam SNARE associated Golgi protein
PDGGJEKI_00629 1.2e-227 murN 2.3.2.16 V FemAB family
PDGGJEKI_00630 2.9e-171 S oxidoreductase
PDGGJEKI_00631 6.2e-48 XK27_09445 S Domain of unknown function (DUF1827)
PDGGJEKI_00632 5.7e-85 mutT 3.5.4.33, 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
PDGGJEKI_00633 0.0 clpE O Belongs to the ClpA ClpB family
PDGGJEKI_00634 1.1e-181 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PDGGJEKI_00635 1e-34 ykuJ S protein conserved in bacteria
PDGGJEKI_00636 5.8e-118 WQ51_01820 P Binding-protein-dependent transport system inner membrane component
PDGGJEKI_00637 1.4e-130 glnQ 3.6.3.21 E abc transporter atp-binding protein
PDGGJEKI_00638 3.1e-78 feoA P FeoA domain protein
PDGGJEKI_00639 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
PDGGJEKI_00640 3.3e-07
PDGGJEKI_00641 5e-150 I Alpha/beta hydrolase family
PDGGJEKI_00642 1.1e-155 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PDGGJEKI_00643 9.5e-147 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PDGGJEKI_00644 0.0 pbp2b 3.4.16.4 M penicillin-binding protein
PDGGJEKI_00645 1.7e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PDGGJEKI_00646 4.1e-150 licT K antiterminator
PDGGJEKI_00647 4.6e-88 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PDGGJEKI_00648 9.8e-65 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
PDGGJEKI_00649 2.2e-165 era M An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PDGGJEKI_00650 2.4e-150 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PDGGJEKI_00651 1.2e-98 coaE 2.7.1.24, 3.2.2.23, 4.2.99.18 GH23 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PDGGJEKI_00652 3.2e-220 mdtG EGP Major facilitator Superfamily
PDGGJEKI_00653 2e-33 secG U Preprotein translocase subunit SecG
PDGGJEKI_00654 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PDGGJEKI_00655 6.6e-81 smpB O the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PDGGJEKI_00656 3.7e-276 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PDGGJEKI_00657 1.3e-63 yugI 5.3.1.9 J RNA binding protein, contains ribosomal protein S1 domain
PDGGJEKI_00658 1.1e-195 pepQ 3.4.13.9 E Belongs to the peptidase M24B family
PDGGJEKI_00659 3.2e-181 ccpA K Catabolite control protein A
PDGGJEKI_00660 2.9e-201 yyaQ S YjbR
PDGGJEKI_00661 1.1e-201 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PDGGJEKI_00662 3.9e-78 yueI S Protein of unknown function (DUF1694)
PDGGJEKI_00663 7.4e-247 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PDGGJEKI_00664 7.4e-206 S Phage integrase family
PDGGJEKI_00665 4.3e-17 E Pfam:DUF955
PDGGJEKI_00668 4.4e-30 S sequence-specific DNA binding
PDGGJEKI_00669 3.9e-21 S Protein of unknown function (DUF739)
PDGGJEKI_00672 2.2e-24
PDGGJEKI_00674 1.2e-79 M Pilin isopeptide linkage domain protein
PDGGJEKI_00675 6.9e-176 D AAA domain
PDGGJEKI_00676 9e-129 S AAA domain
PDGGJEKI_00677 2.3e-67
PDGGJEKI_00678 3.2e-268 L helicase
PDGGJEKI_00679 0.0 L Primase C terminal 2 (PriCT-2)
PDGGJEKI_00680 4e-16
PDGGJEKI_00681 1.7e-56 rusA L crossover junction endodeoxyribonuclease RusA
PDGGJEKI_00684 1.7e-10
PDGGJEKI_00687 1.5e-15 S Protein of unknown function (DUF1642)
PDGGJEKI_00689 2e-17 S YopX protein
PDGGJEKI_00692 2.6e-24 L DNA packaging
PDGGJEKI_00693 1.7e-222 S Pfam:Terminase_3C
PDGGJEKI_00694 2.2e-263 S Phage portal protein, SPP1 Gp6-like
PDGGJEKI_00695 2.5e-124 M Phage minor capsid protein 2
PDGGJEKI_00696 2e-72 S Phage minor structural protein GP20
PDGGJEKI_00697 6.7e-140 S peptidase activity
PDGGJEKI_00699 1.4e-55
PDGGJEKI_00700 2.4e-24 S Minor capsid protein
PDGGJEKI_00701 3.1e-23 S Minor capsid protein
PDGGJEKI_00702 1.5e-52 S Minor capsid protein from bacteriophage
PDGGJEKI_00703 3e-75
PDGGJEKI_00704 6.4e-23
PDGGJEKI_00705 6.9e-86 S Bacteriophage Gp15 protein
PDGGJEKI_00706 9.3e-228 S transmembrane transport
PDGGJEKI_00707 1.3e-107
PDGGJEKI_00708 7e-166 S peptidoglycan catabolic process
PDGGJEKI_00709 1.5e-18 3.1.1.5 E GDSL-like Lipase/Acylhydrolase family
PDGGJEKI_00710 6.2e-57 S Pfam:Phage_holin_4_1
PDGGJEKI_00711 1.1e-23 S COG5546 Small integral membrane protein
PDGGJEKI_00712 6.5e-09
PDGGJEKI_00715 5.7e-80 S peptidoglycan catabolic process
PDGGJEKI_00716 1.2e-25 WQ51_00785
PDGGJEKI_00717 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
PDGGJEKI_00718 1.3e-218 ywbD 2.1.1.191 J Methyltransferase
PDGGJEKI_00719 4.1e-116 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PDGGJEKI_00720 7.4e-155 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PDGGJEKI_00721 1.9e-200 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PDGGJEKI_00722 1.9e-217 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PDGGJEKI_00723 5.9e-205 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
PDGGJEKI_00724 4.2e-53 yheA S Belongs to the UPF0342 family
PDGGJEKI_00725 5e-168 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PDGGJEKI_00726 7.1e-234 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PDGGJEKI_00727 7.2e-78 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PDGGJEKI_00728 1.4e-153 pheA 4.2.1.51 E Prephenate dehydratase
PDGGJEKI_00729 8e-247 msrR K Transcriptional regulator
PDGGJEKI_00730 1.7e-152 ydiA P C4-dicarboxylate transporter malic acid transport
PDGGJEKI_00731 5e-201 I acyl-CoA dehydrogenase
PDGGJEKI_00732 2e-97 mip S hydroperoxide reductase activity
PDGGJEKI_00733 1.4e-251 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDGGJEKI_00734 5.2e-53 K TfoX N-terminal domain
PDGGJEKI_00735 1.4e-68 E cog cog0346
PDGGJEKI_00736 1.1e-153 tetD K Transcriptional regulator, effector binding domain protein
PDGGJEKI_00737 3.6e-91 K Acetyltransferase (GNAT) domain
PDGGJEKI_00738 1.2e-95
PDGGJEKI_00739 4.2e-136 S CAAX protease self-immunity
PDGGJEKI_00740 2.6e-158 K DNA-binding helix-turn-helix protein
PDGGJEKI_00741 7e-136 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
PDGGJEKI_00742 6.3e-205 yeaN P transporter
PDGGJEKI_00743 1.3e-151 yitS S EDD domain protein, DegV family
PDGGJEKI_00744 5.8e-95 XK27_08140 K Bacterial regulatory proteins, tetR family
PDGGJEKI_00745 1.5e-107 cutC P Participates in the control of copper homeostasis
PDGGJEKI_00747 6.8e-145 S Domain of unknown function (DUF4300)
PDGGJEKI_00748 4.3e-122 V CAAX protease self-immunity
PDGGJEKI_00749 3.9e-158 fecD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PDGGJEKI_00750 1.4e-125 fecE 3.6.3.34 HP ABC transporter
PDGGJEKI_00751 7.7e-175 fatB P COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
PDGGJEKI_00752 1.6e-120 ybbA S Putative esterase
PDGGJEKI_00753 2.5e-158 yegS 2.7.1.107 I Diacylglycerol kinase
PDGGJEKI_00754 1.8e-171 S Domain of unknown function (DUF389)
PDGGJEKI_00756 6.1e-30 S Transglycosylase associated protein
PDGGJEKI_00757 5.5e-98
PDGGJEKI_00758 6.7e-23 S Small integral membrane protein
PDGGJEKI_00759 7.7e-68 S Asp23 family, cell envelope-related function
PDGGJEKI_00760 3.3e-08 K CsbD-like
PDGGJEKI_00761 9.5e-173 pdhD 1.8.1.4 C Dehydrogenase
PDGGJEKI_00762 3.6e-167 acoA C Acetoin dehydrogenase E1 component subunit alpha
PDGGJEKI_00763 1.3e-174 acoB C dehydrogenase E1 component
PDGGJEKI_00764 4.7e-142 acoC 2.3.1.12, 2.3.1.61 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PDGGJEKI_00765 4.2e-80 Q Methyltransferase domain
PDGGJEKI_00766 3.4e-74 K TetR family transcriptional regulator
PDGGJEKI_00767 7.1e-47
PDGGJEKI_00768 2.8e-126 V CAAX protease self-immunity
PDGGJEKI_00769 1.2e-10
PDGGJEKI_00770 1.3e-19 M Bacterial lipoprotein
PDGGJEKI_00771 4.1e-60 S Protein of unknown function (DUF1722)
PDGGJEKI_00772 2.8e-63 yqeB S Pyrimidine dimer DNA glycosylase
PDGGJEKI_00774 3e-49
PDGGJEKI_00775 2.6e-93 S CAAX protease self-immunity
PDGGJEKI_00776 6.7e-116 estA E GDSL-like Lipase/Acylhydrolase
PDGGJEKI_00777 3.8e-100
PDGGJEKI_00778 6e-278 sulP P Sulfate permease and related transporters (MFS superfamily)
PDGGJEKI_00779 1.2e-146 ycgQ S TIGR03943 family
PDGGJEKI_00780 6e-155 XK27_03015 S permease
PDGGJEKI_00782 0.0 yhgF K Transcriptional accessory protein
PDGGJEKI_00783 2.2e-41 pspC KT PspC domain
PDGGJEKI_00784 3.5e-166 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PDGGJEKI_00785 1.6e-143 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PDGGJEKI_00786 3.7e-08 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PDGGJEKI_00787 1.9e-66 ytxH S General stress protein
PDGGJEKI_00789 7.5e-177 yegQ O Peptidase U32
PDGGJEKI_00790 2.9e-251 yegQ O Peptidase U32
PDGGJEKI_00791 1e-85 bioY S biotin synthase
PDGGJEKI_00793 1.1e-33 XK27_12190 S protein conserved in bacteria
PDGGJEKI_00794 9.9e-231 mntH P H( )-stimulated, divalent metal cation uptake system
PDGGJEKI_00795 8.7e-13
PDGGJEKI_00796 9.2e-210 dcm 2.1.1.37 H C-5 cytosine-specific DNA methylase
PDGGJEKI_00797 3.2e-153 mutH L DNA mismatch repair enzyme MutH
PDGGJEKI_00798 1.8e-13
PDGGJEKI_00799 3.8e-216 L the current gene model (or a revised gene model) may contain a frame shift
PDGGJEKI_00800 8.3e-287 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PDGGJEKI_00801 2.8e-137 M LysM domain
PDGGJEKI_00802 8.4e-23
PDGGJEKI_00803 5.2e-175 S hydrolase
PDGGJEKI_00805 7.3e-115 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase
PDGGJEKI_00806 7.9e-82 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PDGGJEKI_00807 3.5e-139 XK27_00880 3.5.1.28 M Glycosyl hydrolase, family 25
PDGGJEKI_00808 8.7e-26 P Hemerythrin HHE cation binding domain protein
PDGGJEKI_00809 4.3e-155 5.2.1.8 G hydrolase
PDGGJEKI_00810 6.1e-114 1.14.14.5 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PDGGJEKI_00811 1.2e-211 MA20_36090 S Protein of unknown function (DUF2974)
PDGGJEKI_00812 9.3e-133 sdh 1.1.1.276, 1.1.1.313, 1.1.1.381 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PDGGJEKI_00813 2e-45 S Phage derived protein Gp49-like (DUF891)
PDGGJEKI_00814 1.1e-44 K Helix-turn-helix domain
PDGGJEKI_00815 0.0 hsdR 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
PDGGJEKI_00816 1.8e-75 S Protein of unknown function (DUF1524)
PDGGJEKI_00817 7.8e-118 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
PDGGJEKI_00818 4.4e-245 oppD EP AAA domain, putative AbiEii toxin, Type IV TA system
PDGGJEKI_00819 3.6e-304 hsdM 2.1.1.72 V type I restriction-modification system
PDGGJEKI_00820 2.6e-134 S double-stranded DNA endodeoxyribonuclease activity
PDGGJEKI_00821 1.4e-27 S double-stranded DNA endodeoxyribonuclease activity
PDGGJEKI_00822 0.0 2.4.1.21 GT5 M Right handed beta helix region
PDGGJEKI_00823 7.7e-92 lemA S LemA family
PDGGJEKI_00824 1.2e-134 htpX O Belongs to the peptidase M48B family
PDGGJEKI_00825 1.9e-118 sirR K iron dependent repressor
PDGGJEKI_00826 8e-171 sitA P Belongs to the bacterial solute-binding protein 9 family
PDGGJEKI_00827 1.3e-132 mtsC P ABC-type Mn2 Zn2 transport systems, permease components
PDGGJEKI_00828 1.8e-125 sitB 3.6.3.35 P ABC transporter, ATP-binding protein
PDGGJEKI_00829 8.8e-73 S Psort location CytoplasmicMembrane, score
PDGGJEKI_00830 5.3e-63 S Domain of unknown function (DUF4430)
PDGGJEKI_00831 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PDGGJEKI_00832 3.5e-183 holA 2.7.7.7 L DNA polymerase III delta subunit
PDGGJEKI_00833 9.4e-112 sodA 1.15.1.1 C radicals which are normally produced within the cells and which are toxic to biological systems
PDGGJEKI_00834 8.8e-164 3.5.2.6 V D-alanyl-D-alanine carboxypeptidase
PDGGJEKI_00835 6.6e-103 pilD 3.4.23.43 NOU Type II secretory pathway prepilin signal peptidase PulO and related peptidases
PDGGJEKI_00836 1.1e-89 dps P Belongs to the Dps family
PDGGJEKI_00837 3.4e-79 perR P Belongs to the Fur family
PDGGJEKI_00838 7.1e-27 yqgQ S protein conserved in bacteria
PDGGJEKI_00839 1e-176 glk 2.7.1.2 G Glucokinase
PDGGJEKI_00840 0.0 typA T GTP-binding protein TypA
PDGGJEKI_00842 1.1e-250 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PDGGJEKI_00843 6.1e-199 murG 2.4.1.227 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PDGGJEKI_00844 1.5e-131 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PDGGJEKI_00845 7.1e-224 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PDGGJEKI_00846 7.3e-234 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PDGGJEKI_00847 3e-122 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PDGGJEKI_00848 1.8e-99 sepF D cell septum assembly
PDGGJEKI_00849 2.9e-30 yggT D integral membrane protein
PDGGJEKI_00850 2.7e-143 ylmH S conserved protein, contains S4-like domain
PDGGJEKI_00851 8.4e-138 divIVA D Cell division initiation protein
PDGGJEKI_00852 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PDGGJEKI_00853 3.8e-216 L the current gene model (or a revised gene model) may contain a frame shift
PDGGJEKI_00854 2.5e-183 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDGGJEKI_00855 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDGGJEKI_00856 2.9e-27 nrdH O Glutaredoxin
PDGGJEKI_00857 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PDGGJEKI_00858 7.4e-211 citZ 2.3.3.1 C Belongs to the citrate synthase family
PDGGJEKI_00859 1.1e-220 icd 1.1.1.42 C Isocitrate dehydrogenase
PDGGJEKI_00860 3e-38 ptsH G phosphocarrier protein Hpr
PDGGJEKI_00861 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PDGGJEKI_00862 6.6e-265 gapN 1.2.1.9 C Belongs to the aldehyde dehydrogenase family
PDGGJEKI_00863 7.4e-160 XK27_05670 S Putative esterase
PDGGJEKI_00864 3e-152 XK27_05675 S Esterase
PDGGJEKI_00865 1.6e-224 XK27_05680 6.3.2.2, 6.3.2.4 M carbamoylphosphate synthase large subunit
PDGGJEKI_00866 6.3e-175 yfmL 3.6.4.13 L DEAD DEAH box helicase
PDGGJEKI_00867 3.1e-113 udk 2.7.1.48 F Cytidine monophosphokinase
PDGGJEKI_00868 0.0 uup S abc transporter atp-binding protein
PDGGJEKI_00869 1.3e-35 MA20_06245 S yiaA/B two helix domain
PDGGJEKI_00870 1.7e-131 pip 1.11.1.10 S Alpha beta hydrolase
PDGGJEKI_00871 0.0 mprF 2.3.2.3 J Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PDGGJEKI_00872 1.5e-149 cobQ S glutamine amidotransferase
PDGGJEKI_00873 1.2e-255 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain protein
PDGGJEKI_00874 1.4e-148 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PDGGJEKI_00875 1.1e-162 ybbR S Protein conserved in bacteria
PDGGJEKI_00876 3.7e-249 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PDGGJEKI_00877 1.3e-64 gtrA S GtrA-like protein
PDGGJEKI_00878 3.3e-121 trmK 2.1.1.217 S SAM-dependent methyltransferase
PDGGJEKI_00879 2.4e-144 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PDGGJEKI_00880 4e-145 zupT P Mediates zinc uptake. May also transport other divalent cations
PDGGJEKI_00881 2.1e-199 yurR 1.4.5.1 E oxidoreductase
PDGGJEKI_00882 8.7e-259 S phospholipase Carboxylesterase
PDGGJEKI_00883 1.2e-160 rfbA 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PDGGJEKI_00884 9.2e-112 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PDGGJEKI_00885 8.1e-204 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PDGGJEKI_00887 1.4e-29 KT response to antibiotic
PDGGJEKI_00888 6.5e-215 hemN H Involved in the biosynthesis of porphyrin-containing compound
PDGGJEKI_00889 1.5e-140 fat 3.1.2.21 I Acyl-ACP thioesterase
PDGGJEKI_00890 4.4e-138 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PDGGJEKI_00891 5.5e-118 ylfI S tigr01906
PDGGJEKI_00892 5.5e-138 hisK 3.1.3.15 E Histidinol phosphatase and related hydrolases of the PHP family
PDGGJEKI_00893 1.4e-146 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
PDGGJEKI_00894 1.2e-59 XK27_08085
PDGGJEKI_00895 3.6e-191 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PDGGJEKI_00896 1.5e-175 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PDGGJEKI_00897 5.5e-118 hisG 2.4.2.17 E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PDGGJEKI_00898 9.2e-234 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PDGGJEKI_00899 6.7e-107 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
PDGGJEKI_00900 5.2e-110 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PDGGJEKI_00901 7e-130 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PDGGJEKI_00902 9.6e-138 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PDGGJEKI_00903 1.5e-58 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PDGGJEKI_00904 4.1e-50 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
PDGGJEKI_00906 3.8e-93 XK27_05505 S Psort location CytoplasmicMembrane, score
PDGGJEKI_00907 2e-143 P molecular chaperone
PDGGJEKI_00908 6.3e-94 S Carbohydrate-binding domain-containing protein Cthe_2159
PDGGJEKI_00909 1.5e-178 XK27_08075 M glycosyl transferase family 2
PDGGJEKI_00910 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
PDGGJEKI_00911 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
PDGGJEKI_00912 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
PDGGJEKI_00913 1.1e-230 rodA D Belongs to the SEDS family
PDGGJEKI_00914 1.2e-244 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PDGGJEKI_00915 1.4e-113 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
PDGGJEKI_00916 2.7e-174 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PDGGJEKI_00917 2.2e-134 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PDGGJEKI_00918 2.6e-21 Q Methyltransferase domain
PDGGJEKI_00919 8.3e-64 GnaT 2.5.1.16 K acetyltransferase
PDGGJEKI_00920 0.0 recJ L Single-strand DNA-specific exonuclease, C terminal domain
PDGGJEKI_00921 1.7e-93 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PDGGJEKI_00922 3e-181 metA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PDGGJEKI_00923 1.3e-125 dnaD
PDGGJEKI_00924 4.9e-119 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PDGGJEKI_00926 3.9e-235 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDGGJEKI_00927 4.6e-29 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDGGJEKI_00928 2.9e-154 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PDGGJEKI_00929 3.2e-147 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PDGGJEKI_00930 7e-72 argR K Regulates arginine biosynthesis genes
PDGGJEKI_00931 2.3e-301 recN L May be involved in recombinational repair of damaged DNA
PDGGJEKI_00932 6.8e-145 DegV S DegV family
PDGGJEKI_00933 6.9e-156 ypmR E COG2755 Lysophospholipase L1 and related esterases
PDGGJEKI_00934 5.2e-96 ypmS S Protein conserved in bacteria
PDGGJEKI_00935 6.3e-39 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PDGGJEKI_00937 3.1e-178 pyrD 1.3.1.14, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate
PDGGJEKI_00938 2.1e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDGGJEKI_00939 4.9e-290 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PDGGJEKI_00940 1.1e-189 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PDGGJEKI_00941 3.5e-37 ysdA L Membrane
PDGGJEKI_00942 1.4e-275 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PDGGJEKI_00943 1.1e-112 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PDGGJEKI_00944 0.0 dnaE 2.7.7.7 L DNA polymerase
PDGGJEKI_00945 1.1e-186 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PDGGJEKI_00946 1e-276 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PDGGJEKI_00947 0.0 Q the current gene model (or a revised gene model) may contain a frame shift
PDGGJEKI_00948 0.0 Q the current gene model (or a revised gene model) may contain a frame shift
PDGGJEKI_00949 1.7e-18 S Domain of unknown function (DUF4649)
PDGGJEKI_00950 4e-176 XK27_08835 S ABC transporter substrate binding protein
PDGGJEKI_00951 2.6e-147 XK27_08840 S Belongs to the binding-protein-dependent transport system permease family
PDGGJEKI_00952 3.1e-136 XK27_08845 S abc transporter atp-binding protein
PDGGJEKI_00953 4.6e-310 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDGGJEKI_00954 9.5e-149 estA CE1 S Esterase
PDGGJEKI_00955 1.6e-126 XK27_08875 O Zinc-dependent metalloprotease
PDGGJEKI_00956 6.3e-18 XK27_08880
PDGGJEKI_00957 1e-75 fld C Flavodoxin
PDGGJEKI_00958 3.2e-281 clcA P Chloride transporter, ClC family
PDGGJEKI_00959 2.1e-39 pheA 1.3.1.12, 2.3.1.79, 4.2.1.51, 5.4.99.5 E Chorismate mutase
PDGGJEKI_00960 4.3e-212 XK27_05110 P Chloride transporter ClC family
PDGGJEKI_00961 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PDGGJEKI_00964 3.2e-20 WQ51_02665 S Protein of unknown function (DUF3042)
PDGGJEKI_00965 1.1e-164 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PDGGJEKI_00966 8.8e-87 ytsP 1.8.4.14 T GAF domain-containing protein
PDGGJEKI_00967 9.2e-303 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDGGJEKI_00968 3e-173 birA 6.3.4.15 HK Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PDGGJEKI_00969 1.2e-211 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PDGGJEKI_00970 2.7e-276 5.1.3.2 GM Psort location CytoplasmicMembrane, score
PDGGJEKI_00971 5.7e-145
PDGGJEKI_00972 0.0 S Uncharacterised protein conserved in bacteria (DUF2194)
PDGGJEKI_00973 3e-270 pelF GT4 M Domain of unknown function (DUF3492)
PDGGJEKI_00974 3.8e-183 pelG M Putative exopolysaccharide Exporter (EPS-E)
PDGGJEKI_00975 1.3e-222 cotH M CotH kinase protein
PDGGJEKI_00976 3e-96 P VTC domain
PDGGJEKI_00977 2e-83 S membrane
PDGGJEKI_00978 3.2e-134 G Domain of unknown function (DUF4832)
PDGGJEKI_00979 1.1e-194 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PDGGJEKI_00980 4.8e-11 S Protein of unknown function (DUF1146)
PDGGJEKI_00981 7.7e-233 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDGGJEKI_00982 5.5e-26 epuA S DNA-directed RNA polymerase subunit beta
PDGGJEKI_00983 7.7e-155 endA F DNA RNA non-specific endonuclease
PDGGJEKI_00984 2.9e-111 tcyB_2 P ABC transporter (permease)
PDGGJEKI_00985 1.9e-116 gltJ P ABC transporter (Permease
PDGGJEKI_00986 1.1e-147 peb1A ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
PDGGJEKI_00987 2.7e-140 glnQ 3.6.3.21 E abc transporter atp-binding protein
PDGGJEKI_00988 3.8e-128 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDGGJEKI_00989 3.6e-228 vicK 2.7.13.3 T Histidine kinase
PDGGJEKI_00990 1.7e-153 vicX 3.1.26.11 S Metal-dependent hydrolases of the beta-lactamase superfamily I
PDGGJEKI_00991 1.5e-56 S Protein of unknown function (DUF454)
PDGGJEKI_00992 1.6e-224 murM 2.3.2.10, 2.3.2.16 V protein involved in methicillin resistance
PDGGJEKI_00993 7.8e-146 yidA S hydrolases of the HAD superfamily
PDGGJEKI_00994 1.9e-145 XK27_00115 2.3.1.128 K Acetyltransferase GNAT family
PDGGJEKI_00995 5.3e-68 ywiB S Domain of unknown function (DUF1934)
PDGGJEKI_00996 0.0 pacL 3.6.3.8 P cation transport ATPase
PDGGJEKI_00997 1.8e-133 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PDGGJEKI_00998 7e-158 yjjH S Calcineurin-like phosphoesterase
PDGGJEKI_00999 4.2e-206 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PDGGJEKI_01000 5.7e-183 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PDGGJEKI_01001 3.2e-124 ftsE D cell division ATP-binding protein FtsE
PDGGJEKI_01002 7.3e-164 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
PDGGJEKI_01003 4.3e-91 mutX 3.6.1.55 F NTP pyrophosphohydrolases including oxidative damage repair enzymes
PDGGJEKI_01004 8.9e-175 yubA S permease
PDGGJEKI_01005 1.5e-220 G COG0457 FOG TPR repeat
PDGGJEKI_01006 3.3e-95 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PDGGJEKI_01007 0.0 lytC 3.4.17.14, 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
PDGGJEKI_01008 4.2e-228 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PDGGJEKI_01009 9.6e-86 ebsA S Family of unknown function (DUF5322)
PDGGJEKI_01010 5.6e-17 M LysM domain
PDGGJEKI_01011 1.1e-116 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PDGGJEKI_01012 1e-85 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PDGGJEKI_01013 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PDGGJEKI_01014 7.4e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PDGGJEKI_01015 2.1e-74 XK27_03610 K Gnat family
PDGGJEKI_01016 1.8e-87 yybC
PDGGJEKI_01017 4.9e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PDGGJEKI_01018 1.5e-266 pepV 3.5.1.18 E Dipeptidase
PDGGJEKI_01019 1.3e-106 ung2 3.2.2.27 L Uracil-DNA glycosylase
PDGGJEKI_01020 5.9e-228 V Glucan-binding protein C
PDGGJEKI_01021 2.5e-253 V Glucan-binding protein C
PDGGJEKI_01022 1.5e-121 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PDGGJEKI_01023 1.7e-229 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
PDGGJEKI_01024 3.2e-95 S Protein of unknown function (DUF1697)
PDGGJEKI_01025 1.6e-143 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
PDGGJEKI_01026 8.1e-54 S LemA family
PDGGJEKI_01027 1e-160 clcA_2 P chloride
PDGGJEKI_01028 1.8e-130 yfeJ 6.3.5.2 F glutamine amidotransferase
PDGGJEKI_01029 3.7e-131 deoD 2.4.2.1, 2.4.2.28 F purine nucleoside phosphorylase
PDGGJEKI_01030 1.2e-248 cps4A K Cell envelope-like function transcriptional attenuator common domain protein
PDGGJEKI_01031 2.6e-132 cpsB 3.1.3.48 GM Capsular polysaccharide biosynthesis protein
PDGGJEKI_01032 3.5e-110 cps4C M biosynthesis protein
PDGGJEKI_01033 1.3e-115 cpsD D COG0489 ATPases involved in chromosome partitioning
PDGGJEKI_01034 1.8e-251 cpsE M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
PDGGJEKI_01035 4.8e-221 rgpAc GT4 M group 1 family protein
PDGGJEKI_01036 3.4e-211 wcoF M Glycosyltransferase, group 1 family protein
PDGGJEKI_01037 7.1e-118 Z012_10770 M Domain of unknown function (DUF1919)
PDGGJEKI_01038 6.5e-163 M Glycosyltransferase, group 2 family protein
PDGGJEKI_01039 1.2e-153 M Glycosyltransferase like family 2
PDGGJEKI_01040 1.5e-174
PDGGJEKI_01041 7e-251 epsU S Polysaccharide biosynthesis protein
PDGGJEKI_01042 2.9e-158 S Acyltransferase family
PDGGJEKI_01043 1.7e-215 glf 5.4.99.9 M UDP-galactopyranose mutase
PDGGJEKI_01044 3e-184 sacB GT2,GT4 M Stealth protein CR2, conserved region 2
PDGGJEKI_01045 9.1e-187 wbbI M transferase activity, transferring glycosyl groups
PDGGJEKI_01047 3.6e-151 supH 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
PDGGJEKI_01048 2.8e-108 pgm G Belongs to the phosphoglycerate mutase family
PDGGJEKI_01049 1.7e-108 G Belongs to the phosphoglycerate mutase family
PDGGJEKI_01050 7.3e-109 G Belongs to the phosphoglycerate mutase family
PDGGJEKI_01051 1.8e-196 S hmm pf01594
PDGGJEKI_01052 1.6e-287 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDGGJEKI_01053 6.4e-39 S granule-associated protein
PDGGJEKI_01054 4.8e-285 S unusual protein kinase
PDGGJEKI_01055 4.5e-101 estA E Lysophospholipase L1 and related esterases
PDGGJEKI_01056 2.7e-157 rssA S Phospholipase, patatin family
PDGGJEKI_01057 6.3e-177 dacA1 3.4.16.4 M Belongs to the peptidase S11 family
PDGGJEKI_01058 2.4e-248 dacA1 3.4.16.4 M Belongs to the peptidase S11 family
PDGGJEKI_01059 7.3e-217 yeaB K Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PDGGJEKI_01060 1e-119 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PDGGJEKI_01061 3.1e-234 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PDGGJEKI_01062 0.0 S the current gene model (or a revised gene model) may contain a frame shift
PDGGJEKI_01063 5.3e-229 2.7.13.3 T protein histidine kinase activity
PDGGJEKI_01064 4.8e-146 hpk9 2.7.13.3 T protein histidine kinase activity
PDGGJEKI_01065 1.8e-37 hpk9 2.7.13.3 T protein histidine kinase activity
PDGGJEKI_01066 6.6e-184 acoA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
PDGGJEKI_01067 7e-181 acoB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PDGGJEKI_01068 3.8e-209 acoC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PDGGJEKI_01069 0.0 lpdA 1.8.1.4 C Dehydrogenase
PDGGJEKI_01070 0.0 3.5.1.28 NU amidase activity
PDGGJEKI_01071 1.6e-197 3.5.1.28 M N-Acetylmuramoyl-L-alanine amidase
PDGGJEKI_01072 1e-108 lytC 3.4.17.14, 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
PDGGJEKI_01073 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PDGGJEKI_01074 3.5e-144 ycdO P periplasmic lipoprotein involved in iron transport
PDGGJEKI_01075 2e-230 ycdB P peroxidase
PDGGJEKI_01076 5e-288 ywbL P COG0672 High-affinity Fe2 Pb2 permease
PDGGJEKI_01077 3.4e-124 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PDGGJEKI_01078 6.1e-25 tatA U protein secretion
PDGGJEKI_01079 5.1e-212 msmX P Belongs to the ABC transporter superfamily
PDGGJEKI_01080 9.8e-152 malG P ABC transporter (Permease
PDGGJEKI_01081 2.2e-249 malF P ABC transporter (Permease
PDGGJEKI_01082 3.6e-227 malX G ABC transporter
PDGGJEKI_01083 1.3e-171 malR K Transcriptional regulator
PDGGJEKI_01084 1.2e-298 malQ 2.4.1.25 GH77 G 4-alpha-glucanotransferase
PDGGJEKI_01085 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PDGGJEKI_01086 1.8e-39
PDGGJEKI_01087 4e-184 lplA 6.3.1.20 H Lipoate-protein ligase
PDGGJEKI_01088 8.6e-193 xerS D Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division
PDGGJEKI_01089 0.0 pepN 3.4.11.2 E aminopeptidase
PDGGJEKI_01090 7.1e-113 phoU P Plays a role in the regulation of phosphate uptake
PDGGJEKI_01091 6.4e-125 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDGGJEKI_01092 4e-150 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDGGJEKI_01093 1.5e-155 pstA P phosphate transport system permease
PDGGJEKI_01094 1.9e-156 pstC P probably responsible for the translocation of the substrate across the membrane
PDGGJEKI_01095 2.6e-155 pstS P phosphate
PDGGJEKI_01096 3.9e-248 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
PDGGJEKI_01097 2.4e-136 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
PDGGJEKI_01098 2.3e-44 yktA S Belongs to the UPF0223 family
PDGGJEKI_01099 7.2e-71 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PDGGJEKI_01100 1.8e-167 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PDGGJEKI_01101 5.8e-144 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PDGGJEKI_01102 7.9e-244 XK27_04775 S hemerythrin HHE cation binding domain
PDGGJEKI_01103 2.3e-34 M1-755 P Hemerythrin HHE cation binding domain protein
PDGGJEKI_01104 2.8e-58 hsdS2 2.1.1.72 V Type I restriction modification DNA specificity domain
PDGGJEKI_01105 1.7e-45 hsdS2 2.1.1.72 V Type I restriction modification DNA specificity domain
PDGGJEKI_01106 5.5e-86 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PDGGJEKI_01107 9.5e-138 S haloacid dehalogenase-like hydrolase
PDGGJEKI_01108 1.5e-239 metY 2.5.1.49 E o-acetylhomoserine
PDGGJEKI_01109 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PDGGJEKI_01110 6.6e-221 agcS E (Alanine) symporter
PDGGJEKI_01111 5.2e-243 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PDGGJEKI_01112 3.6e-175 bglC K Transcriptional regulator
PDGGJEKI_01113 0.0 sasH 3.1.3.5, 3.6.1.45 F Belongs to the 5'-nucleotidase family
PDGGJEKI_01114 4.9e-82 yecS P ABC transporter (Permease
PDGGJEKI_01115 7.9e-149 yckB ET Belongs to the bacterial solute-binding protein 3 family
PDGGJEKI_01116 2.2e-239 nylA 3.5.1.4 J Belongs to the amidase family
PDGGJEKI_01117 4.4e-112 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PDGGJEKI_01118 1.6e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PDGGJEKI_01119 6.5e-176 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PDGGJEKI_01120 2.9e-145 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
PDGGJEKI_01121 1.6e-94 thiJ 2.7.11.1, 3.5.1.124 S DJ-1 family
PDGGJEKI_01122 1.4e-134 S TraX protein
PDGGJEKI_01123 4.3e-308 FbpA K RNA-binding protein homologous to eukaryotic snRNP
PDGGJEKI_01124 2.6e-259 S Psort location CytoplasmicMembrane, score
PDGGJEKI_01125 1.5e-231 dinF V Mate efflux family protein
PDGGJEKI_01126 2.4e-178 yclQ P ABC-type enterochelin transport system, periplasmic component
PDGGJEKI_01127 0.0 V Type III restriction enzyme, res subunit
PDGGJEKI_01128 2.9e-82 gph 3.1.3.18 S HAD hydrolase, family IA, variant 1
PDGGJEKI_01129 2.1e-132 2.4.2.3 F Phosphorylase superfamily
PDGGJEKI_01131 2.6e-186 adhB 1.1.1.1, 1.1.1.14 E Zinc-binding dehydrogenase
PDGGJEKI_01132 2.9e-196 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
PDGGJEKI_01133 5.8e-158 czcD P cation diffusion facilitator family transporter
PDGGJEKI_01134 1.2e-94 K Transcriptional regulator, TetR family
PDGGJEKI_01135 4.1e-70 S Protein of unknown function with HXXEE motif
PDGGJEKI_01136 4.5e-138 pnuC H nicotinamide mononucleotide transporter
PDGGJEKI_01137 8.2e-140 S Phenazine biosynthesis protein
PDGGJEKI_01138 5.7e-92 tetR K transcriptional regulator
PDGGJEKI_01139 4.3e-124 V abc transporter atp-binding protein
PDGGJEKI_01140 0.0 V ABC transporter (Permease
PDGGJEKI_01141 2.4e-34 L Integrase core domain protein
PDGGJEKI_01142 7.7e-109 magIII L Base excision DNA repair protein, HhH-GPD family
PDGGJEKI_01143 2e-264 proWX P ABC transporter
PDGGJEKI_01144 1.7e-128 proV E ATPases associated with a variety of cellular activities
PDGGJEKI_01145 1.1e-147 1.6.5.2 GM epimerase
PDGGJEKI_01146 7.2e-58 mgrA K DNA-binding transcription factor activity
PDGGJEKI_01147 5.7e-57 ymdB S Macro domain protein
PDGGJEKI_01148 9.4e-12 S Macro domain
PDGGJEKI_01149 1.5e-91 K COG COG0846 NAD-dependent protein deacetylases, SIR2 family
PDGGJEKI_01150 4.3e-29 C Pyridoxamine 5'-phosphate oxidase
PDGGJEKI_01151 8.8e-133 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
PDGGJEKI_01152 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
PDGGJEKI_01155 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PDGGJEKI_01157 8.2e-137 IQ Acetoin reductase
PDGGJEKI_01158 9.1e-44 pspE P Rhodanese-like protein
PDGGJEKI_01159 1.4e-71 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
PDGGJEKI_01160 1.9e-222 XK27_05470 E Methionine synthase
PDGGJEKI_01161 3.6e-257 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PDGGJEKI_01162 1.7e-225 T PhoQ Sensor
PDGGJEKI_01163 1e-119 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDGGJEKI_01165 4.8e-54 V ABC-2 family transporter protein
PDGGJEKI_01166 1.6e-83 mutF V AAA domain, putative AbiEii toxin, Type IV TA system
PDGGJEKI_01167 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PDGGJEKI_01168 3.5e-157 dprA LU DNA protecting protein DprA
PDGGJEKI_01169 2.2e-165 GK ROK family
PDGGJEKI_01170 4.5e-135 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDGGJEKI_01171 1.6e-157 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PDGGJEKI_01172 5.3e-127 K DNA-binding helix-turn-helix protein
PDGGJEKI_01173 6e-91 niaR S small molecule binding protein (contains 3H domain)
PDGGJEKI_01174 2.7e-86
PDGGJEKI_01175 1e-274 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PDGGJEKI_01176 2e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PDGGJEKI_01177 8.5e-125 gntR1 K transcriptional
PDGGJEKI_01178 2.3e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PDGGJEKI_01179 2.8e-97 rimL J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PDGGJEKI_01180 7.2e-189 adhP 1.1.1.1 C alcohol dehydrogenase
PDGGJEKI_01181 1e-44
PDGGJEKI_01182 3.3e-269 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PDGGJEKI_01183 2.3e-156 aatB ET ABC transporter substrate-binding protein
PDGGJEKI_01184 4.4e-112 glnQ 3.6.3.21 E abc transporter atp-binding protein
PDGGJEKI_01185 1.4e-105 artQ P ABC transporter (Permease
PDGGJEKI_01186 1.9e-58 phnA P Alkylphosphonate utilization operon protein PhnA
PDGGJEKI_01187 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PDGGJEKI_01188 2.4e-164 cpsY K Transcriptional regulator
PDGGJEKI_01189 1e-125 mur1 3.4.17.14, 3.5.1.28 NU muramidase
PDGGJEKI_01190 2.6e-167 yeiH S Membrane
PDGGJEKI_01192 3.4e-09
PDGGJEKI_01193 2e-283 adcA P Belongs to the bacterial solute-binding protein 9 family
PDGGJEKI_01194 2.2e-143 XK27_10720 D peptidase activity
PDGGJEKI_01195 2.1e-276 pepD E Dipeptidase
PDGGJEKI_01196 2.2e-160 whiA K May be required for sporulation
PDGGJEKI_01197 6.2e-182 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PDGGJEKI_01198 4.5e-163 rapZ S Displays ATPase and GTPase activities
PDGGJEKI_01199 2e-115 yejC S cyclic nucleotide-binding protein
PDGGJEKI_01200 4.5e-206 D nuclear chromosome segregation
PDGGJEKI_01201 4.2e-94 queF 1.7.1.13 S Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily
PDGGJEKI_01202 1.2e-134 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
PDGGJEKI_01203 8.8e-83 queD 4.1.2.50, 4.2.3.12 H synthase
PDGGJEKI_01204 1.5e-123 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
PDGGJEKI_01205 6.6e-63 tdcF 3.5.99.10 J endoribonuclease L-PSP
PDGGJEKI_01206 5.7e-20
PDGGJEKI_01207 3.2e-261 asnS 6.1.1.22 J Catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
PDGGJEKI_01208 1.1e-212 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
PDGGJEKI_01209 1.1e-81 ypmB S Protein conserved in bacteria
PDGGJEKI_01210 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PDGGJEKI_01211 4.7e-114 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
PDGGJEKI_01212 3.5e-169 yufQ S Belongs to the binding-protein-dependent transport system permease family
PDGGJEKI_01213 2.6e-181 yufP S Belongs to the binding-protein-dependent transport system permease family
PDGGJEKI_01214 1.6e-277 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
PDGGJEKI_01215 3.2e-187 tcsA S membrane
PDGGJEKI_01216 2.2e-64 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PDGGJEKI_01217 3.9e-108 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PDGGJEKI_01218 1.1e-231 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
PDGGJEKI_01219 1.7e-105 rsmC 2.1.1.172 J Methyltransferase small domain protein
PDGGJEKI_01220 1.2e-171 coaA 2.7.1.33 F Pantothenic acid kinase
PDGGJEKI_01221 1e-29 rpsT J Binds directly to 16S ribosomal RNA
PDGGJEKI_01222 1.7e-241 T PhoQ Sensor
PDGGJEKI_01223 9.4e-121 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDGGJEKI_01224 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PDGGJEKI_01225 3.5e-115 coaB 4.1.1.36, 6.3.2.5 H Phosphopantothenate-cysteine ligase
PDGGJEKI_01226 8.2e-91 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PDGGJEKI_01227 2.7e-92 panT S ECF transporter, substrate-specific component
PDGGJEKI_01228 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
PDGGJEKI_01229 5.3e-164 metF 1.5.1.20 E reductase
PDGGJEKI_01230 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PDGGJEKI_01232 0.0 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH component I
PDGGJEKI_01233 0.0 3.6.3.8 P cation transport ATPase
PDGGJEKI_01234 5.3e-242 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PDGGJEKI_01235 2.2e-35 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDGGJEKI_01236 5.6e-236 dltB M Membrane protein involved in D-alanine export
PDGGJEKI_01237 1.5e-294 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDGGJEKI_01238 0.0 XK27_10035 V abc transporter atp-binding protein
PDGGJEKI_01239 2.2e-291 yfiB1 V abc transporter atp-binding protein
PDGGJEKI_01240 1.1e-99 pvaA M lytic transglycosylase activity
PDGGJEKI_01241 1.9e-178 ndpA S 37-kD nucleoid-associated bacterial protein
PDGGJEKI_01242 3.3e-228 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PDGGJEKI_01243 1.6e-103 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PDGGJEKI_01244 3.7e-143 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PDGGJEKI_01245 1.1e-190 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PDGGJEKI_01246 2.6e-109 tdk 2.7.1.21 F thymidine kinase
PDGGJEKI_01247 1.8e-184 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PDGGJEKI_01248 1.1e-152 gst O Glutathione S-transferase
PDGGJEKI_01249 1e-176 nrnA 3.1.13.3, 3.1.3.7 S domain protein
PDGGJEKI_01250 3.5e-174 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDGGJEKI_01251 4.4e-45 rpmE2 J 50S ribosomal protein L31
PDGGJEKI_01252 3.9e-229 mntH P Mn2 and Fe2 transporters of the NRAMP family
PDGGJEKI_01253 9.3e-162 ypuA S secreted protein
PDGGJEKI_01254 1.8e-71 yaeR E COG0346 Lactoylglutathione lyase and related lyases
PDGGJEKI_01255 1.8e-131 srtA 3.4.22.70 M Sortase (surface protein transpeptidase)
PDGGJEKI_01256 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDGGJEKI_01257 9.1e-181 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PDGGJEKI_01258 4.5e-255 noxE P NADH oxidase
PDGGJEKI_01259 2.5e-294 yfmM S abc transporter atp-binding protein
PDGGJEKI_01260 3.4e-81 XK27_01265 S ECF-type riboflavin transporter, S component
PDGGJEKI_01261 1.1e-134 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
PDGGJEKI_01262 9.4e-81 S ECF-type riboflavin transporter, S component
PDGGJEKI_01264 4.9e-211 XK27_08130 K Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PDGGJEKI_01265 7e-56 nrdD_1 1.1.98.6, 1.17.4.1 F Ribonucleoside-triphosphate reductase
PDGGJEKI_01267 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDGGJEKI_01268 8.4e-93 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PDGGJEKI_01269 6.6e-198 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PDGGJEKI_01270 1e-22 WQ51_00220 K Helix-turn-helix domain
PDGGJEKI_01271 1.8e-77 S Protein of unknown function (DUF3278)
PDGGJEKI_01272 0.0 smc D Required for chromosome condensation and partitioning
PDGGJEKI_01273 9.3e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PDGGJEKI_01274 1.9e-172 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PDGGJEKI_01275 2.8e-199 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PDGGJEKI_01276 8.8e-124 alkD L DNA alkylation repair enzyme
PDGGJEKI_01277 9.1e-292 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDGGJEKI_01278 6.3e-93 pat 2.3.1.183 M acetyltransferase
PDGGJEKI_01279 4.8e-279 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDGGJEKI_01280 3.5e-280 opuD M Belongs to the BCCT transporter (TC 2.A.15) family
PDGGJEKI_01281 4.2e-53
PDGGJEKI_01282 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PDGGJEKI_01283 1.3e-128 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 E hydrolase
PDGGJEKI_01284 1.8e-119 sdaAB 4.3.1.17 E L-serine dehydratase
PDGGJEKI_01285 2e-147 sdaAA 4.3.1.17 E L-serine dehydratase
PDGGJEKI_01286 0.0 fruA 3.2.1.1, 3.2.1.26, 3.2.1.65, 3.2.1.80 GH13,GH32 G Belongs to the glycosyl hydrolase 32 family
PDGGJEKI_01287 1.4e-162 yjlA EG membrane
PDGGJEKI_01288 5.6e-81 3.4.21.89 S RDD family
PDGGJEKI_01289 2.9e-22
PDGGJEKI_01290 6.3e-88
PDGGJEKI_01291 2.3e-24
PDGGJEKI_01292 2.2e-76 K Acetyltransferase (GNAT) domain
PDGGJEKI_01293 2.5e-141 S ABC-2 family transporter protein
PDGGJEKI_01294 2.5e-139 S ABC-2 family transporter protein
PDGGJEKI_01295 1.4e-184 S AAA domain, putative AbiEii toxin, Type IV TA system
PDGGJEKI_01296 3.6e-80
PDGGJEKI_01299 1.9e-85 yfjR K regulation of single-species biofilm formation
PDGGJEKI_01300 7.7e-129 S Protein of unknown function DUF262
PDGGJEKI_01301 1.7e-205 S Protein of unknown function DUF262
PDGGJEKI_01302 3.3e-101 desR K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PDGGJEKI_01303 2e-189 desK 2.7.13.3 T Histidine kinase
PDGGJEKI_01304 1.5e-132 yvfS V ABC-2 type transporter
PDGGJEKI_01305 1.4e-142 XK27_09825 V 'abc transporter, ATP-binding protein
PDGGJEKI_01309 4.4e-178 anK3 G response to abiotic stimulus
PDGGJEKI_01310 0.0 hscC O Belongs to the heat shock protein 70 family
PDGGJEKI_01311 7.3e-164 yocS S Transporter
PDGGJEKI_01312 2.2e-81 cdd 2.4.2.4, 3.5.4.5 F cytidine deaminase activity
PDGGJEKI_01313 1.2e-116 yvfS V Transporter
PDGGJEKI_01314 2.5e-158 XK27_09825 V abc transporter atp-binding protein
PDGGJEKI_01315 1.4e-15 liaI KT membrane
PDGGJEKI_01316 2.6e-30 liaI KT membrane
PDGGJEKI_01317 6.1e-93 XK27_05000 S metal cluster binding
PDGGJEKI_01318 0.0 V ABC transporter (permease)
PDGGJEKI_01319 1.1e-133 macB2 V ABC transporter, ATP-binding protein
PDGGJEKI_01320 1.8e-149 T Histidine kinase
PDGGJEKI_01321 5.4e-124 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDGGJEKI_01322 2.5e-98 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PDGGJEKI_01323 1.9e-223 pbuX F xanthine permease
PDGGJEKI_01324 1.2e-272 V (ABC) transporter
PDGGJEKI_01325 7.5e-144 K sequence-specific DNA binding
PDGGJEKI_01326 6.7e-243 norM V Multidrug efflux pump
PDGGJEKI_01328 6.9e-178 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PDGGJEKI_01329 1.9e-14
PDGGJEKI_01330 1.1e-32 T DNase/tRNase domain of colicin-like bacteriocin
PDGGJEKI_01331 0.0 S Domain of unknown function DUF87
PDGGJEKI_01332 3e-124 T ATPase. Has a role at an early stage in the morphogenesis of the spore coat
PDGGJEKI_01333 3.2e-229 brnQ E Component of the transport system for branched-chain amino acids
PDGGJEKI_01334 7.8e-182 manA 5.3.1.8 G mannose-6-phosphate isomerase
PDGGJEKI_01336 3.2e-34 V Psort location CytoplasmicMembrane, score
PDGGJEKI_01337 8.5e-65 V Psort location CytoplasmicMembrane, score
PDGGJEKI_01338 2.8e-97 V ABC-type antimicrobial peptide transport system, ATPase component
PDGGJEKI_01339 4.2e-125 S TraX protein
PDGGJEKI_01340 5.9e-48 T PhoQ Sensor
PDGGJEKI_01341 1.2e-21 T PhoQ Sensor
PDGGJEKI_01342 5.8e-73 T response regulator receiver
PDGGJEKI_01343 1.4e-55 MA20_36090 S Protein of unknown function (DUF2974)
PDGGJEKI_01344 7.2e-157 S DUF218 domain
PDGGJEKI_01345 5.1e-50 L High confidence in function and specificity
PDGGJEKI_01346 1.7e-57 S Protein of unknown function (DUF3290)
PDGGJEKI_01347 1.8e-105 S Protein of unknown function (DUF421)
PDGGJEKI_01348 5.9e-15 csbD K CsbD-like
PDGGJEKI_01349 6.7e-105 S Carbohydrate-binding domain-containing protein Cthe_2159
PDGGJEKI_01350 1.4e-25 S Carbohydrate-binding domain-containing protein Cthe_2159
PDGGJEKI_01351 2.8e-49 XK27_01300 S ASCH
PDGGJEKI_01352 2.4e-211 yfnA E amino acid
PDGGJEKI_01353 0.0 S dextransucrase activity
PDGGJEKI_01355 6.2e-137 tcyC2 3.6.3.21 E abc transporter atp-binding protein
PDGGJEKI_01356 4.8e-112 yxeN P ABC transporter, permease protein
PDGGJEKI_01357 2.9e-109 ytmL P ABC transporter (Permease
PDGGJEKI_01358 1.2e-163 ET ABC transporter substrate-binding protein
PDGGJEKI_01359 4e-176 4.1.1.37 H Uroporphyrinogen decarboxylase (URO-D)
PDGGJEKI_01360 3.9e-84 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
PDGGJEKI_01361 2e-42 S Sugar efflux transporter for intercellular exchange
PDGGJEKI_01362 4.9e-202 P FtsX-like permease family
PDGGJEKI_01363 1.6e-123 V abc transporter atp-binding protein
PDGGJEKI_01364 1.8e-96 K WHG domain
PDGGJEKI_01365 2.4e-167 ydhF S Aldo keto reductase
PDGGJEKI_01368 3.2e-27 XK27_07105 K transcriptional
PDGGJEKI_01369 5.5e-31
PDGGJEKI_01370 4.8e-108 XK27_02070 S nitroreductase
PDGGJEKI_01371 3.7e-154 1.13.11.2 S glyoxalase
PDGGJEKI_01372 1.1e-77 ywnA K Transcriptional regulator
PDGGJEKI_01373 3.4e-155 E Alpha/beta hydrolase of unknown function (DUF915)
PDGGJEKI_01374 6.9e-221 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDGGJEKI_01375 4.8e-168 bcrA V abc transporter atp-binding protein
PDGGJEKI_01376 4.4e-127 S ABC-2 family transporter protein
PDGGJEKI_01377 1.5e-45 S Domain of unknown function (DUF4352)
PDGGJEKI_01379 1.7e-125 T PhoQ Sensor
PDGGJEKI_01380 9.9e-126 T Xre family transcriptional regulator
PDGGJEKI_01381 5.4e-110 drgA C nitroreductase
PDGGJEKI_01382 6.3e-96 yoaK S Protein of unknown function (DUF1275)
PDGGJEKI_01383 5.3e-40 DJ nuclease activity
PDGGJEKI_01384 1.9e-30 XK27_10490
PDGGJEKI_01385 2.9e-159 yvgN C reductase
PDGGJEKI_01386 5.8e-191 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PDGGJEKI_01387 3.5e-299 dexB 3.2.1.10, 3.2.1.70 GH13 G COG0366 Glycosidases
PDGGJEKI_01388 1.2e-220 vncS 2.7.13.3 T Histidine kinase
PDGGJEKI_01389 1.2e-115 K Response regulator receiver domain protein
PDGGJEKI_01390 1.5e-234 vex3 V Efflux ABC transporter, permease protein
PDGGJEKI_01391 1e-108 vex2 V abc transporter atp-binding protein
PDGGJEKI_01392 3.6e-182 vex1 V Efflux ABC transporter, permease protein
PDGGJEKI_01393 5e-284 XK27_07020 S Belongs to the UPF0371 family
PDGGJEKI_01395 2.2e-199 gldA 1.1.1.6 C glycerol dehydrogenase
PDGGJEKI_01396 4.2e-178 XK27_10475 S oxidoreductase
PDGGJEKI_01397 2.2e-58 dhaM 2.7.1.121 S dihydroxyacetone kinase, phosphotransfer subunit
PDGGJEKI_01398 1.1e-93 dhaL 2.7.1.121 S Dihydroxyacetone kinase
PDGGJEKI_01399 8.5e-179 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dihydroxyacetone kinase
PDGGJEKI_01400 2.2e-224 thrE K Psort location CytoplasmicMembrane, score
PDGGJEKI_01401 0.0 M Putative cell wall binding repeat
PDGGJEKI_01402 4.1e-34 S Immunity protein 41
PDGGJEKI_01403 0.0 pepO 3.4.24.71 O Peptidase family M13
PDGGJEKI_01404 9e-08 S Enterocin A Immunity
PDGGJEKI_01405 4.9e-193 mccF V LD-carboxypeptidase
PDGGJEKI_01406 4.6e-15 S integral membrane protein
PDGGJEKI_01407 5.5e-43 czrA K helix_turn_helix, Arsenical Resistance Operon Repressor
PDGGJEKI_01408 1.8e-117 yhfC S Putative membrane peptidase family (DUF2324)
PDGGJEKI_01409 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
PDGGJEKI_01410 2.1e-253 S dextransucrase activity
PDGGJEKI_01411 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
PDGGJEKI_01412 9.1e-36 M Putative cell wall binding repeat
PDGGJEKI_01413 1.2e-22 S dextransucrase activity
PDGGJEKI_01414 8.9e-238 M Putative cell wall binding repeat
PDGGJEKI_01415 2.2e-236 S dextransucrase activity
PDGGJEKI_01416 3.1e-92 S dextransucrase activity
PDGGJEKI_01417 0.0 S dextransucrase activity
PDGGJEKI_01418 1.7e-102 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
PDGGJEKI_01419 3.1e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
PDGGJEKI_01420 0.0 M Putative cell wall binding repeat
PDGGJEKI_01421 0.0 M Putative cell wall binding repeat
PDGGJEKI_01422 1.6e-162 M Putative cell wall binding repeat
PDGGJEKI_01423 0.0 S dextransucrase activity
PDGGJEKI_01424 0.0 M Putative cell wall binding repeat
PDGGJEKI_01425 9.3e-222 S dextransucrase activity
PDGGJEKI_01427 4.2e-133 XK27_00785 S CAAX protease self-immunity
PDGGJEKI_01428 4.6e-239 EGP Major facilitator Superfamily
PDGGJEKI_01429 3.1e-66 rmaI K Transcriptional regulator, MarR family
PDGGJEKI_01430 4e-88 maa 2.3.1.79 GK Maltose O-acetyltransferase
PDGGJEKI_01431 1.7e-131 S N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity
PDGGJEKI_01432 0.0 3.5.1.28 M domain protein
PDGGJEKI_01433 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
PDGGJEKI_01434 4.2e-24
PDGGJEKI_01438 3.3e-76 sraP UW Hep Hag repeat protein
PDGGJEKI_01439 4.4e-270 sraP UW Hep Hag repeat protein
PDGGJEKI_01440 1.2e-188 nss M transferase activity, transferring glycosyl groups
PDGGJEKI_01441 3.6e-16 S Accessory secretory protein Sec, Asp5
PDGGJEKI_01442 2.6e-17 S Accessory secretory protein Sec Asp4
PDGGJEKI_01443 6.1e-244 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
PDGGJEKI_01444 3.4e-280 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
PDGGJEKI_01445 0.0 secA2 U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PDGGJEKI_01446 1e-78 asp3 S Accessory Sec system protein Asp3
PDGGJEKI_01447 3.7e-290 asp2 3.4.11.5 S Accessory Sec system protein Asp2
PDGGJEKI_01448 5.5e-289 asp1 S Accessory Sec system protein Asp1
PDGGJEKI_01449 9.5e-212 secY2 U Part of the accessory SecA2 SecY2 system specifically required for export of
PDGGJEKI_01450 0.0 M family 8
PDGGJEKI_01451 0.0 sbcC L ATPase involved in DNA repair
PDGGJEKI_01452 2.1e-219 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PDGGJEKI_01453 0.0 GM domain, Protein
PDGGJEKI_01454 0.0 zmpB M signal peptide protein, YSIRK family
PDGGJEKI_01455 8.1e-196 fhaB M Rib/alpha-like repeat
PDGGJEKI_01456 0.0 M domain protein
PDGGJEKI_01457 3.2e-09
PDGGJEKI_01459 9.7e-190 XK27_10075 S abc transporter atp-binding protein
PDGGJEKI_01460 0.0 V abc transporter atp-binding protein
PDGGJEKI_01461 3.4e-295 V abc transporter atp-binding protein
PDGGJEKI_01462 0.0 gshF 6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
PDGGJEKI_01464 1.3e-282 S Protein of unknown function (DUF3114)
PDGGJEKI_01465 6.5e-99 2.3.1.128 K Acetyltransferase GNAT Family
PDGGJEKI_01466 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PDGGJEKI_01467 1.6e-282 glgA 2.4.1.21 GT5 G Synthesizes alpha-1,4-glucan chains using ADP-glucose
PDGGJEKI_01468 3.4e-179 glgD 2.4.1.21, 2.7.7.27 GT5 G glucose-1-phosphate adenylyltransferase
PDGGJEKI_01469 6.8e-188 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PDGGJEKI_01470 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PDGGJEKI_01471 0.0 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PDGGJEKI_01472 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PDGGJEKI_01473 1.2e-188 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
PDGGJEKI_01474 1.9e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PDGGJEKI_01475 7.6e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PDGGJEKI_01478 1.8e-113 vraR K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PDGGJEKI_01479 9.7e-170 vraS 2.7.13.3 T Histidine kinase
PDGGJEKI_01480 6.6e-117 yvqF S Membrane
PDGGJEKI_01481 2.2e-102 kcsA P Ion transport protein
PDGGJEKI_01482 8.3e-292 prkC 2.7.11.1 KLT serine threonine protein kinase
PDGGJEKI_01483 2.9e-134 stp 3.1.3.16 T phosphatase
PDGGJEKI_01484 7.8e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PDGGJEKI_01485 1.8e-170 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PDGGJEKI_01486 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PDGGJEKI_01487 3.6e-46 rpoZ 2.7.7.6 K DNA-directed 5'-3' RNA polymerase activity
PDGGJEKI_01488 8.8e-113 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
PDGGJEKI_01489 2.4e-195 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PDGGJEKI_01490 2.4e-142 XK27_02985 S overlaps another CDS with the same product name
PDGGJEKI_01491 4.2e-144 supH S overlaps another CDS with the same product name
PDGGJEKI_01492 7.3e-62 yvoA_1 K Transcriptional
PDGGJEKI_01493 6.1e-115 skfE V abc transporter atp-binding protein
PDGGJEKI_01494 9.9e-130 V Psort location CytoplasmicMembrane, score
PDGGJEKI_01495 6.8e-170 oppF P Belongs to the ABC transporter superfamily
PDGGJEKI_01496 1.1e-200 oppD P Belongs to the ABC transporter superfamily
PDGGJEKI_01497 1.7e-165 amiD P ABC transporter (Permease
PDGGJEKI_01498 2.1e-277 amiC P ABC transporter (Permease
PDGGJEKI_01499 5.5e-311 amiA E ABC transporter, substrate-binding protein, family 5
PDGGJEKI_01500 0.0 amiA E ABC transporter, substrate-binding protein, family 5
PDGGJEKI_01501 2.2e-174 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PDGGJEKI_01502 1.7e-170 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PDGGJEKI_01503 7.5e-152 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PDGGJEKI_01504 3e-119 yjbM 2.7.6.5 S Gtp pyrophosphokinase
PDGGJEKI_01505 6e-100 yjbK S Adenylate cyclase
PDGGJEKI_01506 5.1e-176 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDGGJEKI_01507 1.6e-205 iscS 2.8.1.7 E Cysteine desulfurase
PDGGJEKI_01508 8.2e-60 XK27_04120 S Putative amino acid metabolism
PDGGJEKI_01509 8.1e-117 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PDGGJEKI_01510 8.2e-128 puuD T peptidase C26
PDGGJEKI_01511 2.6e-118 radC E Belongs to the UPF0758 family
PDGGJEKI_01512 0.0 rgpF M Rhamnan synthesis protein F
PDGGJEKI_01513 6e-183 rgpEc GT2 M Glycosyl transferase family 2
PDGGJEKI_01514 4e-223 rgpD 3.6.3.38 P Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PDGGJEKI_01515 5.2e-142 rgpC GM Transport permease protein
PDGGJEKI_01516 4.2e-175 rgpB GT2 M Glycosyltransferase, group 2 family protein
PDGGJEKI_01517 2.3e-215 rgpA GT4 M Domain of unknown function (DUF1972)
PDGGJEKI_01518 1.7e-138 S Predicted membrane protein (DUF2142)
PDGGJEKI_01519 3.6e-177 tagF 2.7.8.12 M Glycosyl transferase, family 2
PDGGJEKI_01520 1.9e-215 amrA S polysaccharide biosynthetic process
PDGGJEKI_01521 1.1e-45 XK27_09090 S Uncharacterized conserved protein (DUF2304)
PDGGJEKI_01522 4.2e-124 ycbB S Glycosyl transferase family 2
PDGGJEKI_01523 2.2e-159 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PDGGJEKI_01524 1.4e-170 yfdH GT2 M COG0463, glycosyltransferases involved in cell wall biogenesis
PDGGJEKI_01525 3.4e-55 yitW K metal-sulfur cluster biosynthetic enzyme
PDGGJEKI_01526 4e-201 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PDGGJEKI_01527 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PDGGJEKI_01528 6.4e-50 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PDGGJEKI_01529 3.2e-20 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PDGGJEKI_01530 1.9e-136 gltS ET Belongs to the bacterial solute-binding protein 3 family
PDGGJEKI_01531 1.2e-210 arcT 2.6.1.1 E Aminotransferase
PDGGJEKI_01532 1.3e-137 ET Belongs to the bacterial solute-binding protein 3 family
PDGGJEKI_01533 2.1e-138 ET ABC transporter
PDGGJEKI_01534 3.7e-84 mutT 3.6.1.55 F Nudix family
PDGGJEKI_01535 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PDGGJEKI_01537 3.3e-164 S CAAX amino terminal protease family protein
PDGGJEKI_01538 0.0 glnP P ABC-type amino acid transport signal transduction systems periplasmic component domain
PDGGJEKI_01539 1.6e-134 glnQ 3.6.3.21 E abc transporter atp-binding protein
PDGGJEKI_01540 1.7e-17 XK27_00735
PDGGJEKI_01541 1.5e-247 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PDGGJEKI_01543 1.3e-131 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PDGGJEKI_01544 4.4e-10 O ADP-ribosylglycohydrolase
PDGGJEKI_01545 6.7e-63 paaI Q protein possibly involved in aromatic compounds catabolism
PDGGJEKI_01546 6e-61 ycaO O OsmC-like protein
PDGGJEKI_01548 7e-148 EG Permeases of the drug metabolite transporter (DMT) superfamily
PDGGJEKI_01550 2.6e-112 serB 3.1.3.3 E phosphoserine phosphatase
PDGGJEKI_01551 8.4e-299 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PDGGJEKI_01552 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDGGJEKI_01553 1.8e-93 3.1.3.18 S IA, variant 1
PDGGJEKI_01554 3.2e-116 lrgB M Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgA, with the holin-like proteins CidA and or CidB. The LrgAB and CidAB proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses
PDGGJEKI_01555 3.5e-56 lrgA S Effector of murein hydrolase LrgA
PDGGJEKI_01557 1.1e-68 ogt 2.1.1.63, 3.2.2.20 L methylated-DNA-[protein]-cysteine S-methyltransferase activity
PDGGJEKI_01558 7.7e-219 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDGGJEKI_01559 3e-104 wecD M Acetyltransferase (GNAT) domain
PDGGJEKI_01560 8.8e-209 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PDGGJEKI_01561 5.7e-158 GK ROK family
PDGGJEKI_01562 1.8e-71 gloA 4.4.1.5 E Lactoylglutathione lyase
PDGGJEKI_01563 1.9e-145 XK27_08050 O HflC and HflK could regulate a protease
PDGGJEKI_01564 2.2e-204 potD P spermidine putrescine ABC transporter
PDGGJEKI_01565 6.8e-131 potC P ABC-type spermidine putrescine transport system, permease component II
PDGGJEKI_01566 4.1e-139 potB P ABC-type spermidine putrescine transport system, permease component I
PDGGJEKI_01567 3.4e-211 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PDGGJEKI_01568 2.1e-168 murB 1.3.1.98 M cell wall formation
PDGGJEKI_01569 3.7e-82 folK 2.7.6.3, 4.1.2.25 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
PDGGJEKI_01570 5e-60 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PDGGJEKI_01571 2.2e-292 amy 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
PDGGJEKI_01572 3.2e-144 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PDGGJEKI_01573 7.7e-100 folE 3.5.4.16 F gtp cyclohydrolase
PDGGJEKI_01574 0.0 ydaO E amino acid
PDGGJEKI_01575 2.3e-237 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PDGGJEKI_01576 1.5e-36 ylqC L Belongs to the UPF0109 family
PDGGJEKI_01577 2.4e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PDGGJEKI_01579 4.8e-201 2.7.13.3 T protein histidine kinase activity
PDGGJEKI_01580 2.6e-124 agrA KT phosphorelay signal transduction system
PDGGJEKI_01581 4.3e-167 O protein import
PDGGJEKI_01582 9.6e-166 tehB 2.1.1.265 PQ tellurite resistance protein tehb
PDGGJEKI_01583 1.7e-17 yjdB S Domain of unknown function (DUF4767)
PDGGJEKI_01584 8.7e-198 XK27_00915 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PDGGJEKI_01586 1.4e-158 xth 3.1.11.2 L exodeoxyribonuclease III
PDGGJEKI_01587 5.8e-72 S QueT transporter
PDGGJEKI_01589 1.3e-171 yfjR K regulation of single-species biofilm formation
PDGGJEKI_01591 3.8e-182 yegS 2.7.1.107 I Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
PDGGJEKI_01592 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PDGGJEKI_01593 1.7e-85 ccl S cog cog4708
PDGGJEKI_01594 9e-162 rbn E Belongs to the UPF0761 family
PDGGJEKI_01595 4.2e-166 map 3.4.11.18 E Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed
PDGGJEKI_01596 3e-232 ytoI K transcriptional regulator containing CBS domains
PDGGJEKI_01597 2.8e-99 XK27_07830 2.3.1.128 J Acetyltransferase GNAT Family
PDGGJEKI_01598 2.1e-230 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDGGJEKI_01599 0.0 comEC S Competence protein ComEC
PDGGJEKI_01600 4.3e-92 comEA L COG1555 DNA uptake protein and related DNA-binding proteins
PDGGJEKI_01601 3.2e-115 plsC 2.3.1.51 I Acyltransferase
PDGGJEKI_01602 2.8e-147 nodB3 G Polysaccharide deacetylase
PDGGJEKI_01603 7.9e-140 yabB 2.1.1.223 L Methyltransferase
PDGGJEKI_01604 1e-32 yazA L endonuclease containing a URI domain
PDGGJEKI_01605 2.2e-245 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PDGGJEKI_01606 1.6e-152 corA P CorA-like protein
PDGGJEKI_01607 3.3e-62 yjqA S Bacterial PH domain
PDGGJEKI_01608 1.7e-99 thiT S Thiamine transporter
PDGGJEKI_01609 2.3e-300 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PDGGJEKI_01610 1.8e-116 ywaF S Integral membrane protein (intg_mem_TP0381)
PDGGJEKI_01611 1.6e-255 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PDGGJEKI_01615 3.3e-155 cjaA ET ABC transporter substrate-binding protein
PDGGJEKI_01616 1.7e-134 glnQ 3.6.3.21 E abc transporter atp-binding protein
PDGGJEKI_01617 4.6e-107 P ABC transporter (Permease
PDGGJEKI_01618 6.6e-114 papP P ABC transporter (Permease
PDGGJEKI_01619 3.5e-191 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PDGGJEKI_01620 2.7e-31 copZ 2.7.7.77 P Heavy metal-associated domain protein
PDGGJEKI_01621 0.0 copA 3.6.3.54 P P-type ATPase
PDGGJEKI_01622 1.8e-72 copY K negative regulation of transcription, DNA-templated
PDGGJEKI_01623 7.8e-163 EGP Major facilitator Superfamily
PDGGJEKI_01626 1.3e-142 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PDGGJEKI_01627 3.2e-228 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PDGGJEKI_01628 3.6e-100 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E belongs to the TrpF family
PDGGJEKI_01629 1.9e-133 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
PDGGJEKI_01630 3.9e-179 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PDGGJEKI_01631 2.3e-104 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH anthranilate
PDGGJEKI_01632 1.4e-256 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PDGGJEKI_01633 2.2e-39 pchB 2.5.1.19, 4.2.1.10, 4.2.99.21, 5.4.99.5 E Chorismate mutase
PDGGJEKI_01634 1.2e-59
PDGGJEKI_01635 0.0 ctpE P E1-E2 ATPase
PDGGJEKI_01636 2.6e-46
PDGGJEKI_01637 7.8e-43 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PDGGJEKI_01639 1.2e-123 V abc transporter atp-binding protein
PDGGJEKI_01640 0.0 V ABC transporter (Permease
PDGGJEKI_01641 1.4e-125 K transcriptional regulator, MerR family
PDGGJEKI_01642 9.2e-104 dnaQ 2.7.7.7 L DNA polymerase III
PDGGJEKI_01643 9.1e-42 WQ51_02910 S Protein of unknown function, DUF536
PDGGJEKI_01644 8.2e-63 XK27_02560 S cog cog2151
PDGGJEKI_01645 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
PDGGJEKI_01646 1.2e-213 ytfP S Flavoprotein
PDGGJEKI_01647 4.7e-72 L COG1943 Transposase and inactivated derivatives
PDGGJEKI_01649 1.5e-120 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PDGGJEKI_01650 7.1e-152 ytmP 2.7.1.89 M Phosphotransferase
PDGGJEKI_01651 2.5e-173 ecsB U Bacterial ABC transporter protein EcsB
PDGGJEKI_01652 1.9e-130 ecsA V abc transporter atp-binding protein
PDGGJEKI_01653 1e-72 hit FG Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
PDGGJEKI_01654 6.9e-07
PDGGJEKI_01657 1.6e-103
PDGGJEKI_01658 0.0 clpL O ATP-dependent Clp protease ATP-binding subunit
PDGGJEKI_01660 1.3e-196 ylbM S Belongs to the UPF0348 family
PDGGJEKI_01661 1.3e-139 yqeM Q Methyltransferase domain protein
PDGGJEKI_01662 2e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PDGGJEKI_01663 1.3e-105 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
PDGGJEKI_01664 1.2e-117 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PDGGJEKI_01665 7.7e-49 yhbY J RNA-binding protein
PDGGJEKI_01666 8.6e-212 yqeH S in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
PDGGJEKI_01667 2.3e-98 yqeG S hydrolase of the HAD superfamily
PDGGJEKI_01668 1.5e-34 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PDGGJEKI_01669 1.9e-189 bdhA 1.1.1.303, 1.1.1.4 E Dehydrogenase
PDGGJEKI_01670 4.8e-61
PDGGJEKI_01671 8.2e-217 celD G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDGGJEKI_01672 1.5e-57
PDGGJEKI_01673 8.5e-40 celC 2.7.1.196, 2.7.1.205 G Phosphotransferase system cellobiose-specific component IIA
PDGGJEKI_01674 1e-279 celR 2.7.1.194, 2.7.1.202, 2.7.1.204 GKT Mga helix-turn-helix domain
PDGGJEKI_01675 1.6e-46 celB 2.7.1.196, 2.7.1.205, 2.7.1.207 G PTS system, Lactose/Cellobiose specific IIB subunit
PDGGJEKI_01676 7.9e-30 S PQ loop repeat
PDGGJEKI_01677 2.7e-18 S response to heat
PDGGJEKI_01678 2.7e-282 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDGGJEKI_01680 2.3e-273 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDGGJEKI_01681 7.7e-269 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PDGGJEKI_01682 5.3e-47 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDGGJEKI_01683 4e-233 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
PDGGJEKI_01684 2e-188 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
PDGGJEKI_01685 1.4e-156 H COG0463 Glycosyltransferases involved in cell wall biogenesis
PDGGJEKI_01686 6.7e-218 M lipopolysaccharide 3-alpha-galactosyltransferase activity
PDGGJEKI_01687 2.6e-293 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDGGJEKI_01688 2e-100 pncA Q isochorismatase
PDGGJEKI_01689 8.1e-140 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
PDGGJEKI_01690 7.6e-238 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase
PDGGJEKI_01691 1.2e-74 XK27_03180 T universal stress protein
PDGGJEKI_01693 1.7e-156 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDGGJEKI_01694 3.3e-10 MU outer membrane autotransporter barrel domain protein
PDGGJEKI_01695 1.5e-239 hlyX S COG1253 Hemolysins and related proteins containing CBS domains
PDGGJEKI_01696 3.3e-141 modF 3.6.3.21, 3.6.3.34 P abc transporter atp-binding protein
PDGGJEKI_01698 7.9e-25
PDGGJEKI_01699 0.0 yjcE P NhaP-type Na H and K H antiporters
PDGGJEKI_01700 1.9e-07
PDGGJEKI_01701 3.8e-96 ytqB J (SAM)-dependent
PDGGJEKI_01702 6e-182 yhcC S radical SAM protein
PDGGJEKI_01703 6.6e-185 ylbL T Belongs to the peptidase S16 family
PDGGJEKI_01704 9.5e-86 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PDGGJEKI_01705 4.3e-92 rsmD 2.1.1.171 L Methyltransferase
PDGGJEKI_01706 2.1e-171 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PDGGJEKI_01707 5e-10 S Protein of unknown function (DUF4059)
PDGGJEKI_01708 4.7e-129 tcyN 3.6.3.21 E abc transporter atp-binding protein
PDGGJEKI_01709 1.1e-150 yxeN P ABC transporter (Permease
PDGGJEKI_01710 7.2e-15 yxeM ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
PDGGJEKI_01711 3.7e-151 yxeM ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
PDGGJEKI_01712 6.1e-35
PDGGJEKI_01713 1.9e-203 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PDGGJEKI_01714 0.0 pflB 2.3.1.54 C formate acetyltransferase'
PDGGJEKI_01715 1.6e-143 cah 4.2.1.1 P carbonic anhydrase
PDGGJEKI_01716 1.1e-72 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PDGGJEKI_01719 3.8e-168 ampC V COG1680 Beta-lactamase class C and other penicillin binding proteins
PDGGJEKI_01720 4.7e-137 cppA E CppA N-terminal
PDGGJEKI_01721 1.5e-94 V CAAX protease self-immunity
PDGGJEKI_01722 5.6e-150 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
PDGGJEKI_01723 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PDGGJEKI_01724 5.2e-07
PDGGJEKI_01727 5.9e-43 spiA K sequence-specific DNA binding
PDGGJEKI_01729 1.8e-133 agrA KT LytTr DNA-binding domain
PDGGJEKI_01730 1.9e-218 blpH 2.7.13.3 T signal transduction protein with a C-terminal ATPase domain
PDGGJEKI_01735 6.7e-26 S Bacteriocin class II with double-glycine leader peptide
PDGGJEKI_01736 0.0 mdlB V abc transporter atp-binding protein
PDGGJEKI_01737 0.0 mdlA V abc transporter atp-binding protein
PDGGJEKI_01740 7.2e-92 XK27_09885 V Glycopeptide antibiotics resistance protein
PDGGJEKI_01741 1.8e-223 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PDGGJEKI_01742 1.8e-61 yutD J protein conserved in bacteria
PDGGJEKI_01743 1.8e-256 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PDGGJEKI_01745 2.1e-220 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PDGGJEKI_01746 8.2e-185 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PDGGJEKI_01747 0.0 ftsI 3.4.16.4 M penicillin-binding protein
PDGGJEKI_01748 2.4e-45 ftsL D cell division protein FtsL
PDGGJEKI_01749 3.9e-173 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PDGGJEKI_01750 3.9e-94
PDGGJEKI_01753 3.8e-61 yhaI J Protein of unknown function (DUF805)
PDGGJEKI_01754 3e-86 L COG1943 Transposase and inactivated derivatives
PDGGJEKI_01755 6.8e-55 yhaI J Membrane
PDGGJEKI_01756 2.7e-222 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PDGGJEKI_01757 7.5e-141 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PDGGJEKI_01758 2.5e-273 XK27_00765
PDGGJEKI_01759 5.8e-132 ecsA_2 V abc transporter atp-binding protein
PDGGJEKI_01760 4e-125 S Protein of unknown function (DUF554)
PDGGJEKI_01761 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PDGGJEKI_01762 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
PDGGJEKI_01763 4e-243 2.7.13.3 T protein histidine kinase activity
PDGGJEKI_01764 4.7e-233 dcuS 2.7.13.3 T protein histidine kinase activity
PDGGJEKI_01765 6.8e-14
PDGGJEKI_01768 5.8e-146 V Psort location CytoplasmicMembrane, score
PDGGJEKI_01770 1.7e-298 O MreB/Mbl protein
PDGGJEKI_01771 4.8e-120 liaI S membrane
PDGGJEKI_01772 2e-74 XK27_02470 K LytTr DNA-binding domain protein
PDGGJEKI_01773 0.0 KT response to antibiotic
PDGGJEKI_01774 6.8e-98 yebC M Membrane
PDGGJEKI_01775 1.4e-259 XK27_03190 S hydrolases of the HAD superfamily
PDGGJEKI_01776 7.1e-178 ansA 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
PDGGJEKI_01778 2.4e-30 yozG K Transcriptional regulator
PDGGJEKI_01782 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PDGGJEKI_01783 5.5e-203 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PDGGJEKI_01784 1.3e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PDGGJEKI_01785 1.6e-196 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PDGGJEKI_01786 1.6e-196 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PDGGJEKI_01787 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PDGGJEKI_01789 2.4e-186 manA 5.3.1.8 G mannose-6-phosphate isomerase
PDGGJEKI_01790 3.5e-171 scrK 2.7.1.2, 2.7.1.4 GK Fructokinase
PDGGJEKI_01791 0.0 scrA 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
PDGGJEKI_01792 1.4e-283 scrB 3.2.1.26 GH32 G invertase
PDGGJEKI_01793 3.9e-176 scrR K Transcriptional regulator
PDGGJEKI_01794 8.1e-73 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PDGGJEKI_01795 1.7e-61 yqhY S protein conserved in bacteria
PDGGJEKI_01796 1.2e-97 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PDGGJEKI_01797 3.3e-85 comEB 3.5.4.12 F ComE operon protein 2
PDGGJEKI_01798 5.4e-187 pepP 3.4.11.9, 3.4.13.9 E Belongs to the peptidase M24B family
PDGGJEKI_01800 3.3e-144 V 'abc transporter, ATP-binding protein
PDGGJEKI_01801 2.8e-32 blpT
PDGGJEKI_01805 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
PDGGJEKI_01806 6.5e-168 corA P COG0598 Mg2 and Co2 transporters
PDGGJEKI_01807 2.9e-122 XK27_01040 S Protein of unknown function (DUF1129)
PDGGJEKI_01809 1.7e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PDGGJEKI_01810 2.5e-81 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PDGGJEKI_01811 1.1e-46 rpsF J Binds together with S18 to 16S ribosomal RNA
PDGGJEKI_01812 4.2e-42 XK27_05745
PDGGJEKI_01813 4e-220 mutY L A G-specific adenine glycosylase
PDGGJEKI_01815 7.6e-10
PDGGJEKI_01817 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PDGGJEKI_01818 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PDGGJEKI_01819 2.3e-93 cvpA S toxin biosynthetic process
PDGGJEKI_01820 9.3e-15 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PDGGJEKI_01821 5.9e-155 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDGGJEKI_01822 1.5e-115 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PDGGJEKI_01823 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PDGGJEKI_01824 4.8e-46 azlD S branched-chain amino acid
PDGGJEKI_01825 3.9e-114 azlC E AzlC protein
PDGGJEKI_01826 4e-184 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PDGGJEKI_01827 2e-71 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PDGGJEKI_01828 7.9e-115 yeaZ 2.3.1.234 O COG1214, inactive homolog of metal-dependent proteases
PDGGJEKI_01829 4.3e-33 ykzG S Belongs to the UPF0356 family
PDGGJEKI_01830 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDGGJEKI_01831 2.1e-114 pscB M CHAP domain protein
PDGGJEKI_01832 5.2e-264 glnA 6.3.1.2 E glutamine synthetase
PDGGJEKI_01833 2.5e-62 glnR K Transcriptional regulator
PDGGJEKI_01834 3e-87 S Fusaric acid resistance protein-like
PDGGJEKI_01835 5.8e-222 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PDGGJEKI_01836 2.3e-117
PDGGJEKI_01837 7.1e-181 gap 1.2.1.12 C Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
PDGGJEKI_01838 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PDGGJEKI_01839 3.9e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PDGGJEKI_01840 2.3e-69 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PDGGJEKI_01841 4e-142 purR 2.4.2.7 F operon repressor
PDGGJEKI_01842 3.1e-178 cbf S 3'-5' exoribonuclease yhaM
PDGGJEKI_01843 2.5e-170 rmuC S RmuC domain protein
PDGGJEKI_01844 2.3e-116 thiN 2.7.6.2 H thiamine pyrophosphokinase
PDGGJEKI_01845 7.8e-120 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PDGGJEKI_01846 9.2e-161 rsgA 3.1.3.100 G One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PDGGJEKI_01848 2.9e-154 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PDGGJEKI_01849 2.9e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PDGGJEKI_01850 4.7e-143 tatD L Hydrolase, tatd
PDGGJEKI_01851 7.2e-74 yccU S CoA-binding protein
PDGGJEKI_01852 2.4e-50 trxA O Belongs to the thioredoxin family
PDGGJEKI_01853 2.3e-142 S Macro domain protein
PDGGJEKI_01854 2.7e-48 L COG1943 Transposase and inactivated derivatives
PDGGJEKI_01855 5.2e-61 L thioesterase
PDGGJEKI_01856 5.5e-53 bta 1.8.1.8 CO cell redox homeostasis
PDGGJEKI_01859 2.4e-225 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PDGGJEKI_01860 2.7e-48 L COG1943 Transposase and inactivated derivatives
PDGGJEKI_01861 3.4e-14 rpmH J Ribosomal protein L34
PDGGJEKI_01862 5.9e-100 1.6.5.2 S NADPH-quinone reductase (modulator of drug activity B)
PDGGJEKI_01863 1.2e-103 K Transcriptional regulator
PDGGJEKI_01864 3.7e-172 jag S RNA-binding protein
PDGGJEKI_01865 9.7e-147 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PDGGJEKI_01866 3.8e-54 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PDGGJEKI_01867 1.6e-263 argH 4.3.2.1 E Argininosuccinate lyase
PDGGJEKI_01868 5.8e-230 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PDGGJEKI_01869 7.2e-130 fasA KT Response regulator of the LytR AlgR family
PDGGJEKI_01870 2.6e-223 fasC 2.7.13.3 T protein histidine kinase activity
PDGGJEKI_01871 1.5e-207 hpk9 2.7.13.3 T protein histidine kinase activity
PDGGJEKI_01872 3e-151 hpk9 2.7.13.3 T protein histidine kinase activity
PDGGJEKI_01873 3.7e-230 2.7.13.3 T signal transduction protein with a C-terminal ATPase domain
PDGGJEKI_01874 1.8e-273 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PDGGJEKI_01875 0.0 amiA E ABC transporter, substrate-binding protein, family 5
PDGGJEKI_01876 1.4e-119 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PDGGJEKI_01877 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PDGGJEKI_01878 4.6e-50 S Protein of unknown function (DUF3397)
PDGGJEKI_01879 5.9e-88 cah 4.2.1.1 P Reversible hydration of carbon dioxide
PDGGJEKI_01880 7e-127 WQ51_05710 S Mitochondrial biogenesis AIM24
PDGGJEKI_01881 1.1e-226 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PDGGJEKI_01882 3.2e-76 3.5.1.19 Q hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
PDGGJEKI_01883 1.3e-78 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
PDGGJEKI_01884 9.1e-107 XK27_09620 S FMN reductase (NADPH) activity
PDGGJEKI_01885 7.9e-230 XK27_09615 C reductase
PDGGJEKI_01886 2.8e-120 fnt P Formate nitrite transporter
PDGGJEKI_01887 1.8e-96 XK27_08585 S Psort location CytoplasmicMembrane, score
PDGGJEKI_01888 5.7e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PDGGJEKI_01889 1e-170 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PDGGJEKI_01890 1.3e-117 gluP 3.4.21.105 O membrane protein (homolog of Drosophila rhomboid)
PDGGJEKI_01891 1.6e-94 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PDGGJEKI_01892 6.7e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PDGGJEKI_01893 5.3e-58 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PDGGJEKI_01894 5.6e-138 S HAD hydrolase, family IA, variant
PDGGJEKI_01895 2e-157 rrmA 2.1.1.187 Q methyltransferase
PDGGJEKI_01899 2.6e-83 tadA 3.5.4.1, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PDGGJEKI_01900 6.6e-66 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PDGGJEKI_01901 3.7e-117 S CAAX protease self-immunity
PDGGJEKI_01902 5.1e-113 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDGGJEKI_01903 2.6e-09 S NTF2 fold immunity protein
PDGGJEKI_01904 3.6e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PDGGJEKI_01905 1e-07 S Domain of unknown function (DUF4651)
PDGGJEKI_01906 1.1e-203 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
PDGGJEKI_01907 4.4e-130 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PDGGJEKI_01908 1.1e-100 S CAAX amino terminal protease family protein
PDGGJEKI_01910 8.1e-109 V CAAX protease self-immunity
PDGGJEKI_01911 8.8e-27 lanR K sequence-specific DNA binding
PDGGJEKI_01912 2.9e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDGGJEKI_01913 4.7e-174 ytxK 2.1.1.72 L DNA methylase
PDGGJEKI_01914 2e-12 comGF U Putative Competence protein ComGF
PDGGJEKI_01915 2e-71 comGF U Competence protein ComGF
PDGGJEKI_01916 3.1e-15 NU Type II secretory pathway pseudopilin
PDGGJEKI_01917 2.4e-69 cglD NU Competence protein
PDGGJEKI_01918 4.7e-41 comGC U Required for transformation and DNA binding
PDGGJEKI_01919 9.7e-144 cglB U protein transport across the cell outer membrane
PDGGJEKI_01920 3.5e-174 comGA NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
PDGGJEKI_01921 1e-68 S cog cog4699
PDGGJEKI_01922 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDGGJEKI_01923 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDGGJEKI_01924 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PDGGJEKI_01925 5.5e-239 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PDGGJEKI_01926 1.3e-193 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PDGGJEKI_01927 5e-76 ilvN 2.2.1.6 E Acetolactate synthase
PDGGJEKI_01928 0.0 ilvB 2.2.1.6 EH Acetolactate synthase
PDGGJEKI_01929 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
PDGGJEKI_01930 6e-302 yloV S kinase related to dihydroxyacetone kinase
PDGGJEKI_01931 1.4e-57 asp S cog cog1302
PDGGJEKI_01932 1.2e-225 norN V Mate efflux family protein
PDGGJEKI_01933 2.7e-277 thrC 4.2.3.1 E Threonine synthase
PDGGJEKI_01936 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PDGGJEKI_01937 0.0 pepO 3.4.24.71 O Peptidase family M13
PDGGJEKI_01938 0.0 treC 3.2.1.93 GH13 G COG0366 Glycosidases
PDGGJEKI_01939 0.0 treB 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
PDGGJEKI_01940 4.3e-124 treR K trehalose operon
PDGGJEKI_01941 4.3e-95 ywlG S Belongs to the UPF0340 family
PDGGJEKI_01944 2e-163 fba 4.1.2.13, 4.1.2.29 G aldolase
PDGGJEKI_01946 1.2e-241 6.3.2.2 H gamma-glutamylcysteine synthetase
PDGGJEKI_01947 4.4e-62 rplQ J ribosomal protein l17
PDGGJEKI_01948 3.6e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDGGJEKI_01949 1.9e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PDGGJEKI_01950 4e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PDGGJEKI_01951 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PDGGJEKI_01952 2.7e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PDGGJEKI_01953 7.3e-118 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PDGGJEKI_01954 2.1e-230 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PDGGJEKI_01955 5.7e-58 rplO J binds to the 23S rRNA
PDGGJEKI_01956 1.9e-23 rpmD J ribosomal protein l30
PDGGJEKI_01957 1.3e-79 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PDGGJEKI_01958 1.9e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PDGGJEKI_01959 6.6e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PDGGJEKI_01960 1.2e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PDGGJEKI_01961 1.5e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDGGJEKI_01962 1.6e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PDGGJEKI_01963 1.4e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PDGGJEKI_01964 3.9e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PDGGJEKI_01965 6e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PDGGJEKI_01966 3.5e-26 rpmC J Belongs to the universal ribosomal protein uL29 family
PDGGJEKI_01967 1.1e-71 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PDGGJEKI_01968 1.6e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PDGGJEKI_01969 7.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PDGGJEKI_01970 1.5e-152 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PDGGJEKI_01971 2.4e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PDGGJEKI_01972 5.7e-104 rplD J Forms part of the polypeptide exit tunnel
PDGGJEKI_01973 2.4e-110 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PDGGJEKI_01974 2.9e-48 rpsJ J Involved in the binding of tRNA to the ribosomes
PDGGJEKI_01975 3e-187 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PDGGJEKI_01976 0.0 XK27_09800 I Acyltransferase
PDGGJEKI_01977 9.7e-36 XK27_09805 S MORN repeat protein
PDGGJEKI_01978 4.9e-78 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PDGGJEKI_01979 3e-248 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PDGGJEKI_01980 4.1e-92 adk 2.7.4.3 F topology modulation protein
PDGGJEKI_01982 4.7e-197 ltrA S Low temperature requirement protein
PDGGJEKI_01983 4.9e-174 yeiH S membrane
PDGGJEKI_01984 5e-90 K sequence-specific DNA binding
PDGGJEKI_01985 9.1e-157 L Replication initiation factor
PDGGJEKI_01986 1.4e-18 S Domain of unknown function (DUF3173)
PDGGJEKI_01987 1.6e-213 int L Belongs to the 'phage' integrase family
PDGGJEKI_01989 3.7e-235 rarA L ATPase related to the helicase subunit of the Holliday junction resolvase
PDGGJEKI_01990 8.4e-27 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PDGGJEKI_01991 6.3e-44 yrzL S Belongs to the UPF0297 family
PDGGJEKI_01992 4e-69 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PDGGJEKI_01993 3.2e-44 yrzB S Belongs to the UPF0473 family
PDGGJEKI_01994 2.3e-293 ccs S the current gene model (or a revised gene model) may contain a frame shift
PDGGJEKI_01995 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PDGGJEKI_01996 7.5e-14
PDGGJEKI_01997 2.4e-89 XK27_10930 K acetyltransferase
PDGGJEKI_01998 8.2e-116 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDGGJEKI_01999 4e-122 yaaA S Belongs to the UPF0246 family
PDGGJEKI_02000 2.7e-166 XK27_01785 S cog cog1284
PDGGJEKI_02001 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PDGGJEKI_02003 5e-240 hisS 6.1.1.21 J histidyl-tRNA synthetase
PDGGJEKI_02004 4.1e-75 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
PDGGJEKI_02005 4.4e-130 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
PDGGJEKI_02006 5.6e-219 metE 2.1.1.14 E Methionine synthase
PDGGJEKI_02007 1.5e-25 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PDGGJEKI_02008 6.7e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PDGGJEKI_02009 7.3e-61 tnp* 1.1.1.193 L An automated process has identified a potential problem with this gene model
PDGGJEKI_02010 1.3e-92 L Transposase
PDGGJEKI_02011 9.5e-47 fruR K transcriptional
PDGGJEKI_02012 2.2e-35 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PDGGJEKI_02013 5.8e-162 T Diguanylate cyclase
PDGGJEKI_02015 2.1e-151 2.4.1.83 GT2 M COG0463, glycosyltransferases involved in cell wall biogenesis
PDGGJEKI_02016 0.0 bcsA 2.4.1.12 GT2 M COG1215 Glycosyltransferases, probably involved in cell wall biogenesis
PDGGJEKI_02017 0.0
PDGGJEKI_02022 7e-115 nudL L hydrolase
PDGGJEKI_02023 1.8e-53 K transcriptional regulator, PadR family
PDGGJEKI_02024 8.6e-62 XK27_06920 S Protein of unknown function (DUF1700)
PDGGJEKI_02025 7.4e-107 S Putative adhesin
PDGGJEKI_02026 2.1e-159 XK27_06930 V domain protein
PDGGJEKI_02027 4.6e-94 XK27_06935 K transcriptional regulator
PDGGJEKI_02028 3.5e-53 ypaA M Membrane
PDGGJEKI_02029 1.1e-10
PDGGJEKI_02030 5.8e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PDGGJEKI_02031 1.8e-47 veg S Biofilm formation stimulator VEG
PDGGJEKI_02032 1e-246 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PDGGJEKI_02033 2.2e-73 rplI J binds to the 23S rRNA
PDGGJEKI_02034 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PDGGJEKI_02035 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PDGGJEKI_02036 8.5e-94 yvbG U UPF0056 membrane protein
PDGGJEKI_02037 2.8e-218 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PDGGJEKI_02038 2.8e-310 S Bacterial membrane protein, YfhO
PDGGJEKI_02039 6.6e-61 isaA GH23 M Immunodominant staphylococcal antigen A
PDGGJEKI_02040 2e-71 lytE M LysM domain protein
PDGGJEKI_02041 2.8e-132 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDGGJEKI_02042 8.9e-153 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDGGJEKI_02043 5.3e-150 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDGGJEKI_02044 4.1e-90 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PDGGJEKI_02045 5.7e-131 S sequence-specific DNA binding
PDGGJEKI_02046 7.5e-236 ymfH S Peptidase M16
PDGGJEKI_02047 1.1e-228 ymfF S Peptidase M16
PDGGJEKI_02048 6.4e-58 yaaA S S4 domain protein YaaA
PDGGJEKI_02049 1.5e-203 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PDGGJEKI_02050 5.6e-275 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PDGGJEKI_02051 1.2e-191 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
PDGGJEKI_02052 7.1e-153 yvjA S membrane
PDGGJEKI_02053 4.3e-305 ybiT S abc transporter atp-binding protein
PDGGJEKI_02054 0.0 XK27_10405 S Bacterial membrane protein YfhO
PDGGJEKI_02058 1.5e-118 yoaK S Protein of unknown function (DUF1275)
PDGGJEKI_02059 2.3e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PDGGJEKI_02060 1.5e-204 htrA 3.4.21.107 O Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain'
PDGGJEKI_02061 2.9e-134 parB K Belongs to the ParB family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)