ORF_ID e_value Gene_name EC_number CAZy COGs Description
GAMOKDAL_00001 1.7e-271 dacC 3.4.16.4 M D-alanyl-D-alanine carboxypeptidase
GAMOKDAL_00002 4.2e-186 yoxA 5.1.3.3 G Aldose 1-epimerase
GAMOKDAL_00003 2.3e-246 yoeA V MATE efflux family protein
GAMOKDAL_00004 4.1e-98 yoeB S IseA DL-endopeptidase inhibitor
GAMOKDAL_00006 2.2e-96 L Integrase
GAMOKDAL_00007 8.7e-34 yoeD G Helix-turn-helix domain
GAMOKDAL_00008 0.0 ggt 2.3.2.2, 3.4.19.13 E gamma-glutamyltransferase
GAMOKDAL_00009 6.3e-154 gltR1 K Transcriptional regulator
GAMOKDAL_00010 2.4e-113 yogA C COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases
GAMOKDAL_00011 2e-58 yogA C COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases
GAMOKDAL_00012 5e-292 gltD 1.4.1.13, 1.4.1.14 E COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases
GAMOKDAL_00013 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase
GAMOKDAL_00014 7.8e-155 gltC K Transcriptional regulator
GAMOKDAL_00015 1.5e-203 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
GAMOKDAL_00016 2.5e-144 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GAMOKDAL_00017 2.5e-59 rtp K Plays a role in DNA replication and termination (fork arrest mechanism). Two dimers of rtp bind to the two inverted repeat regions (IRI and IRII) present in the termination site. The binding of each dimer is centered on an 8 bp direct repeat
GAMOKDAL_00018 3.7e-123 fabG 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
GAMOKDAL_00019 9.2e-39 yoxC S Bacterial protein of unknown function (DUF948)
GAMOKDAL_00020 8e-132 yoxB
GAMOKDAL_00021 2.9e-96 yoaA 2.3.1.128 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
GAMOKDAL_00022 1.1e-125 V ABC-2 family transporter protein
GAMOKDAL_00023 6.4e-94 V ABC-2 family transporter protein
GAMOKDAL_00024 4.8e-139 V AAA domain, putative AbiEii toxin, Type IV TA system
GAMOKDAL_00025 6.6e-80 hpr K helix_turn_helix multiple antibiotic resistance protein
GAMOKDAL_00026 1.5e-233 yoaB EGP Major facilitator Superfamily
GAMOKDAL_00027 1e-276 yoaC 2.7.1.12, 2.7.1.17, 2.7.1.189, 2.7.1.5 G FGGY family of carbohydrate kinases, C-terminal domain
GAMOKDAL_00028 2.9e-182 yoaD 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GAMOKDAL_00029 0.0 yoaE C belongs to the prokaryotic molybdopterin-containing oxidoreductase family
GAMOKDAL_00030 8.7e-32 yoaF
GAMOKDAL_00031 1.5e-171 iolT EGP Major facilitator Superfamily
GAMOKDAL_00032 1.4e-204 S Oxidoreductase family, C-terminal alpha/beta domain
GAMOKDAL_00033 3.2e-151 iolE 4.2.1.44 G Xylose isomerase-like TIM barrel
GAMOKDAL_00034 3.3e-90 purR K Transcriptional regulator
GAMOKDAL_00035 2.2e-07
GAMOKDAL_00036 7e-14
GAMOKDAL_00037 7.7e-35 S Protein of unknown function (DUF4025)
GAMOKDAL_00038 8.5e-179 mcpU NT methyl-accepting chemotaxis protein
GAMOKDAL_00039 2.1e-279 hpaB 1.14.14.9 Q COG2368 Aromatic ring hydroxylase
GAMOKDAL_00040 3.2e-132 yoaJ G Endoglucanase C-terminal domain subunit and related proteins
GAMOKDAL_00041 2.3e-111 yoaK S Membrane
GAMOKDAL_00042 1.4e-195 pelB 4.2.2.10, 4.2.2.2 G Amb_all
GAMOKDAL_00043 4.6e-131 yoqW S Belongs to the SOS response-associated peptidase family
GAMOKDAL_00046 3.4e-210 oxdC 4.1.1.2 G Oxalate decarboxylase
GAMOKDAL_00049 5e-87
GAMOKDAL_00050 7.1e-172 yoaR V vancomycin resistance protein
GAMOKDAL_00051 7.3e-75 yoaS S Protein of unknown function (DUF2975)
GAMOKDAL_00052 4.4e-30 yozG K Transcriptional regulator
GAMOKDAL_00053 6.3e-148 yoaT S Protein of unknown function (DUF817)
GAMOKDAL_00054 8.6e-159 yoaU K LysR substrate binding domain
GAMOKDAL_00055 1.8e-159 yijE EG EamA-like transporter family
GAMOKDAL_00056 1.8e-77 yoaW
GAMOKDAL_00057 7.3e-115 yoaZ 1.11.1.6, 3.5.1.124 S DJ-1/PfpI family
GAMOKDAL_00058 2.2e-168 bla 3.5.2.6 V beta-lactamase
GAMOKDAL_00061 0.0 pps 2.7.9.2 GT phosphoenolpyruvate synthase
GAMOKDAL_00062 4e-121 xlnB 3.2.1.8 G Glycosyl hydrolases family 11
GAMOKDAL_00063 8.8e-37 S TM2 domain
GAMOKDAL_00067 1.1e-116
GAMOKDAL_00069 8.9e-65 yoaQ S Evidence 4 Homologs of previously reported genes of
GAMOKDAL_00070 1.8e-33 yoqW S Belongs to the SOS response-associated peptidase family
GAMOKDAL_00072 4e-100 S aspartate phosphatase
GAMOKDAL_00074 6.9e-19
GAMOKDAL_00075 3.3e-28 dinB2 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GAMOKDAL_00076 1.4e-17 L A nuclease of the HNH/ENDO VII superfamily with conserved LHH
GAMOKDAL_00077 1.2e-100 yokH G SMI1 / KNR4 family
GAMOKDAL_00078 2.2e-276 iaaM 1.4.3.4 E COG1231 Monoamine oxidase
GAMOKDAL_00079 9.3e-53 csaA 6.1.1.10, 6.1.1.20, 6.1.1.6 J tRNA-binding protein
GAMOKDAL_00080 2.3e-133 yobQ K helix_turn_helix, arabinose operon control protein
GAMOKDAL_00081 4.6e-137 yobR 2.3.1.1 J FR47-like protein
GAMOKDAL_00082 3.3e-98 yobS K Transcriptional regulator
GAMOKDAL_00083 3.6e-131 yobT S COG0491 Zn-dependent hydrolases, including glyoxylases
GAMOKDAL_00084 8.3e-87 yobU K Bacterial transcription activator, effector binding domain
GAMOKDAL_00085 2.1e-171 yobV K WYL domain
GAMOKDAL_00086 1e-93 yobW
GAMOKDAL_00087 1e-51 czrA K transcriptional
GAMOKDAL_00088 5.8e-118 pvaA M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
GAMOKDAL_00089 1.5e-92 yozB S membrane
GAMOKDAL_00090 6.4e-145
GAMOKDAL_00091 2.5e-94 yocC
GAMOKDAL_00092 9.3e-186 yocD 3.4.17.13 V peptidase S66
GAMOKDAL_00093 4.1e-203 des 1.14.19.23, 1.14.19.45 I fatty acid desaturase
GAMOKDAL_00094 4.6e-197 desK 2.7.13.3 T Histidine kinase
GAMOKDAL_00095 2.2e-105 desR T COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
GAMOKDAL_00096 6e-112 yocH CBM50 M COG1388 FOG LysM repeat
GAMOKDAL_00097 0.0 recQ 3.6.4.12 L DNA helicase
GAMOKDAL_00098 7.9e-114 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
GAMOKDAL_00099 7.4e-83 dksA T general stress protein
GAMOKDAL_00100 8.4e-54 yocL
GAMOKDAL_00101 2e-30
GAMOKDAL_00102 6.3e-87 yocM O Belongs to the small heat shock protein (HSP20) family
GAMOKDAL_00103 1.1e-40 yozN
GAMOKDAL_00104 1.9e-36 yocN
GAMOKDAL_00105 4.2e-56 yozO S Bacterial PH domain
GAMOKDAL_00106 2.7e-31 yozC
GAMOKDAL_00107 5.2e-289 dhaS 1.2.1.3, 1.2.1.39 C Belongs to the aldehyde dehydrogenase family
GAMOKDAL_00108 0.0 sqhC 4.2.1.137, 5.4.99.7 I COG1657 Squalene cyclase
GAMOKDAL_00109 1.3e-164 sodA 1.15.1.1 P Superoxide dismutase
GAMOKDAL_00110 3.4e-231 yocR S Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
GAMOKDAL_00111 5.1e-168 yocS S -transporter
GAMOKDAL_00112 5.3e-194 sucB 2.3.1.61 C The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2)
GAMOKDAL_00113 0.0 sucA 1.2.4.2, 4.1.1.71 C The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components 2- oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3)
GAMOKDAL_00114 0.0 yojO P Von Willebrand factor
GAMOKDAL_00115 1.1e-161 yojN S ATPase family associated with various cellular activities (AAA)
GAMOKDAL_00116 1e-110 sodC 1.15.1.1 P Destroys radicals which are normally produced within the cells and which are toxic to biological systems
GAMOKDAL_00117 2.1e-198 sle1 3.5.1.28 CBM50 M COG1388 FOG LysM repeat
GAMOKDAL_00118 2.6e-230 yojK CG UDP-glucoronosyl and UDP-glucosyl transferase
GAMOKDAL_00119 2.2e-108 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
GAMOKDAL_00121 1.6e-244 norM V Multidrug efflux pump
GAMOKDAL_00122 3.2e-150 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
GAMOKDAL_00123 3.7e-125 yojG S deacetylase
GAMOKDAL_00124 2.2e-60 yojF S Protein of unknown function (DUF1806)
GAMOKDAL_00125 1.5e-43
GAMOKDAL_00126 1.9e-161 rarD S -transporter
GAMOKDAL_00127 8.6e-65 yozR S COG0071 Molecular chaperone (small heat shock protein)
GAMOKDAL_00128 2.6e-09
GAMOKDAL_00129 7.9e-204 gntP EG COG2610 H gluconate symporter and related permeases
GAMOKDAL_00130 4.7e-64 yodA S tautomerase
GAMOKDAL_00131 4.4e-55 yodB K transcriptional
GAMOKDAL_00132 1.4e-107 yodC C nitroreductase
GAMOKDAL_00133 4.6e-111 mhqD S Carboxylesterase
GAMOKDAL_00134 5.5e-172 yodE E COG0346 Lactoylglutathione lyase and related lyases
GAMOKDAL_00135 6.2e-28 S Protein of unknown function (DUF3311)
GAMOKDAL_00136 1.2e-269 yodF E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GAMOKDAL_00137 2.2e-252 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
GAMOKDAL_00138 6.3e-128 yodH Q Methyltransferase
GAMOKDAL_00139 1.5e-23 yodI
GAMOKDAL_00140 5.5e-139 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
GAMOKDAL_00141 4.1e-127 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
GAMOKDAL_00142 5.3e-09
GAMOKDAL_00143 1.4e-53 yodL S YodL-like
GAMOKDAL_00144 5.4e-107 yodM 3.6.1.27 I Acid phosphatase homologues
GAMOKDAL_00145 2.8e-24 yozD S YozD-like protein
GAMOKDAL_00147 6e-123 yodN
GAMOKDAL_00148 1.4e-36 yozE S Belongs to the UPF0346 family
GAMOKDAL_00149 2.9e-47 yokU S YokU-like protein, putative antitoxin
GAMOKDAL_00150 1.4e-278 kamA 5.4.3.2 E lysine 2,3-aminomutase
GAMOKDAL_00151 5.1e-153 yodP 2.3.1.264 K Acetyltransferase (GNAT) family
GAMOKDAL_00152 3.2e-258 yodQ 3.5.1.16 E Acetylornithine deacetylase
GAMOKDAL_00153 1.6e-117 scoB 2.8.3.5, 2.8.3.8, 2.8.3.9 I COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
GAMOKDAL_00154 6.5e-125 yodS 2.8.3.8, 2.8.3.9 I COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
GAMOKDAL_00155 1.3e-246 yodT H Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
GAMOKDAL_00157 5.9e-143 yiiD K acetyltransferase
GAMOKDAL_00158 1e-253 cgeD M maturation of the outermost layer of the spore
GAMOKDAL_00159 2e-09 cgeC
GAMOKDAL_00160 8.4e-18 cgeC
GAMOKDAL_00161 3.1e-63 cgeA
GAMOKDAL_00162 2.2e-176 cgeB S Spore maturation protein
GAMOKDAL_00163 6.4e-210 phy 3.1.3.8 I Myo-inositol-hexaphosphate 3-phosphohydrolase
GAMOKDAL_00164 5.6e-125 4.2.1.115 GM Polysaccharide biosynthesis protein
GAMOKDAL_00165 3.7e-78 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
GAMOKDAL_00166 1.7e-101 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GAMOKDAL_00167 1.6e-70 ypoP K transcriptional
GAMOKDAL_00168 5.8e-223 mepA V MATE efflux family protein
GAMOKDAL_00169 1.4e-26 ypmT S Uncharacterized ympT
GAMOKDAL_00170 7.2e-98 ypmS S protein conserved in bacteria
GAMOKDAL_00171 1.3e-137 ypmR E GDSL-like Lipase/Acylhydrolase
GAMOKDAL_00172 1.5e-106 ypmQ S protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems
GAMOKDAL_00173 3.4e-39 ypmP S Protein of unknown function (DUF2535)
GAMOKDAL_00174 4.4e-244 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
GAMOKDAL_00175 1.6e-185 pspF K Transcriptional regulator
GAMOKDAL_00176 4.2e-110 hlyIII S protein, Hemolysin III
GAMOKDAL_00177 5.8e-109 ypkP 2.3.1.51 I Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
GAMOKDAL_00178 4.8e-93 folA 1.1.1.262, 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
GAMOKDAL_00179 7.3e-92 pgpA 3.1.3.27 I COG1267 Phosphatidylglycerophosphatase A and related proteins
GAMOKDAL_00180 7.8e-114 ypjP S YpjP-like protein
GAMOKDAL_00181 6.3e-145 ypiP 2.1.1.242 AJ Putative SAM-dependent methyltransferase
GAMOKDAL_00182 1.7e-75 yphP S Belongs to the UPF0403 family
GAMOKDAL_00183 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
GAMOKDAL_00184 6.4e-154 ypgR C COG0694 Thioredoxin-like proteins and domains
GAMOKDAL_00185 2.9e-108 ypgQ S phosphohydrolase
GAMOKDAL_00186 2.8e-87 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
GAMOKDAL_00187 1.4e-175 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
GAMOKDAL_00188 2e-216 ugtP 2.4.1.315 GT28 M Processive glucosyltransferase involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. Is able to successively transfer up to three glucosyl residues to diacylglycerol (DAG), thereby catalyzing the formation of beta-monoglucosyl-DAG (3-O-(beta-D-glucopyranosyl)-1,2-diacyl- sn-glycerol), beta-diglucosyl-DAG (3-O-(beta-D-glucopyranosyl- beta-(1- 6)-D-glucopyranosyl)-1,2-diacyl-sn-glycerol) and beta- triglucosyl-DAG (3-O-(beta-D-glucopyranosyl-beta-(1- 6)-D- glucopyranosyl-beta-(1- 6)-D-glucopyranosyl)-1,2-diacyl-sn- glycerol). Beta-diglucosyl-DAG is the predominant glycolipid found in Bacillales and is also used as a membrane anchor for lipoteichoic acid (LTA)
GAMOKDAL_00189 1e-30 cspD K Cold-shock protein
GAMOKDAL_00190 3.8e-16 degR
GAMOKDAL_00191 8.1e-31 S Protein of unknown function (DUF2564)
GAMOKDAL_00192 2.6e-27 ypeQ S Zinc-finger
GAMOKDAL_00193 6.4e-125 ypeP 3.1.26.4 L COG0328 Ribonuclease HI
GAMOKDAL_00194 2.9e-105 ypdP S Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
GAMOKDAL_00195 2.7e-67 rnhA 3.1.26.4 L Ribonuclease
GAMOKDAL_00197 1.5e-166 polA 2.7.7.7 L 5'3' exonuclease
GAMOKDAL_00198 2e-07
GAMOKDAL_00199 1e-38 ypbS S Protein of unknown function (DUF2533)
GAMOKDAL_00200 0.0 ypbR S Dynamin family
GAMOKDAL_00201 5.1e-87 ypbQ S protein conserved in bacteria
GAMOKDAL_00202 2.8e-207 bcsA Q Naringenin-chalcone synthase
GAMOKDAL_00203 9.5e-226 pbuX F xanthine
GAMOKDAL_00204 7.5e-98 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
GAMOKDAL_00205 3.3e-291 ypwA 3.4.17.19 E Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
GAMOKDAL_00206 1.5e-170 kdgT P The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system
GAMOKDAL_00207 4.3e-101 eda 2.7.1.45, 4.1.2.14, 4.1.3.42 G 2-dehydro-3-deoxy-phosphogluconate aldolase
GAMOKDAL_00208 8.4e-187 kdgK 2.7.1.45 G COG0524 Sugar kinases, ribokinase family
GAMOKDAL_00209 1.5e-186 ptxS K transcriptional
GAMOKDAL_00210 1.4e-158 kduI 5.3.1.17 G Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
GAMOKDAL_00211 5.1e-131 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
GAMOKDAL_00212 0.0 ypvA 3.6.4.12 KL COG1199 Rad3-related DNA helicases
GAMOKDAL_00214 1.6e-224 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
GAMOKDAL_00215 2.8e-45 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
GAMOKDAL_00216 6.3e-91 ypsA S Belongs to the UPF0398 family
GAMOKDAL_00217 8.1e-235 yprB L RNase_H superfamily
GAMOKDAL_00218 0.0 yprA L COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster
GAMOKDAL_00219 3.3e-79 ypqE 2.7.1.199 G COG2190 Phosphotransferase system IIA components
GAMOKDAL_00220 3.6e-70 hspX O Belongs to the small heat shock protein (HSP20) family
GAMOKDAL_00221 1.2e-48 yppG S YppG-like protein
GAMOKDAL_00223 1.5e-11 yppE S Bacterial domain of unknown function (DUF1798)
GAMOKDAL_00226 2.9e-184 yppC S Protein of unknown function (DUF2515)
GAMOKDAL_00227 1.2e-114 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
GAMOKDAL_00228 0.0 ponA 2.4.1.129, 2.7.7.7, 3.4.16.4 GT51 M penicillin-binding protein
GAMOKDAL_00229 2.3e-92 ypoC
GAMOKDAL_00230 2.2e-122 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GAMOKDAL_00231 5.7e-129 dnaD L DNA replication protein DnaD
GAMOKDAL_00232 5.8e-252 asnS 6.1.1.22 J asparaginyl-tRNA
GAMOKDAL_00233 1.3e-221 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
GAMOKDAL_00234 2.2e-79 ypmB S protein conserved in bacteria
GAMOKDAL_00235 6.7e-23 ypmA S Protein of unknown function (DUF4264)
GAMOKDAL_00236 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
GAMOKDAL_00237 3.5e-64 panD 4.1.1.11 H Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
GAMOKDAL_00238 4.7e-157 panC 2.7.4.25, 6.3.2.1 H Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
GAMOKDAL_00239 1.4e-150 panB 2.1.2.11 H Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
GAMOKDAL_00240 8.7e-184 birA 6.3.4.15 K Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
GAMOKDAL_00241 6.6e-218 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
GAMOKDAL_00242 5.3e-209 bshA GT4 M N-acetyl-alpha-D-glucosaminyl L-malate synthase
GAMOKDAL_00243 4.5e-129 bshB1 S proteins, LmbE homologs
GAMOKDAL_00244 7.9e-70 mgsA 2.7.1.24, 4.2.3.3 G methylglyoxal synthase
GAMOKDAL_00245 4.5e-146 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
GAMOKDAL_00246 6.9e-56 ypjD 2.5.1.19 S Nucleotide pyrophosphohydrolase
GAMOKDAL_00247 8.1e-157 ypjC S Uncharacterized protein conserved in bacteria (DUF2179)
GAMOKDAL_00248 6.1e-143 ypjB S sporulation protein
GAMOKDAL_00249 4.4e-98 ypjA S membrane
GAMOKDAL_00250 1.5e-146 qcrC C Menaquinol-cytochrome c reductase cytochrome b c subunit
GAMOKDAL_00251 5.2e-127 petB C COG1290 Cytochrome b subunit of the bc complex
GAMOKDAL_00252 9.3e-97 qcrA C Menaquinol-cytochrome c reductase
GAMOKDAL_00253 4.2e-77 ypiF S Protein of unknown function (DUF2487)
GAMOKDAL_00254 1.1e-98 ypiB S Belongs to the UPF0302 family
GAMOKDAL_00255 4.1e-234 S COG0457 FOG TPR repeat
GAMOKDAL_00256 8.9e-237 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
GAMOKDAL_00257 1.2e-208 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
GAMOKDAL_00258 1.4e-203 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
GAMOKDAL_00259 8e-143 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
GAMOKDAL_00260 6.4e-229 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
GAMOKDAL_00261 3.3e-115 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E Belongs to the TrpF family
GAMOKDAL_00262 4.7e-113 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
GAMOKDAL_00263 1.4e-179 trpD 2.4.2.18, 4.1.3.27 E Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
GAMOKDAL_00264 7.6e-291 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
GAMOKDAL_00265 1e-63 aroH 2.7.4.25, 5.4.99.5 E Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis
GAMOKDAL_00266 5.8e-205 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
GAMOKDAL_00267 5.5e-217 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
GAMOKDAL_00268 1.1e-141 cheR 2.1.1.80 NT COG1352 Methylase of chemotaxis methyl-accepting proteins
GAMOKDAL_00269 9.1e-80 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
GAMOKDAL_00270 4.5e-194 hepT 2.5.1.30, 2.5.1.83, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GAMOKDAL_00271 8.6e-133 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
GAMOKDAL_00272 2.8e-137 hepS 2.5.1.30 H Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
GAMOKDAL_00273 2.3e-34 mtrB K Required for transcription attenuation control in the Trp operon. This trans-acting factor seems to recognize a 10 bases nucleotide sequence in the Trp leader transcript causing transcription termination. Binds the leader RNA only in presence of L-tryptophan
GAMOKDAL_00274 7.1e-101 folE 3.5.4.16 H GTP cyclohydrolase
GAMOKDAL_00275 4.7e-42 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
GAMOKDAL_00276 6.4e-279 spoIVA S ATPase. Has a role at an early stage in the morphogenesis of the spore coat
GAMOKDAL_00277 1.5e-135 yphF
GAMOKDAL_00278 1.6e-18 yphE S Protein of unknown function (DUF2768)
GAMOKDAL_00279 5.6e-181 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
GAMOKDAL_00280 1.5e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
GAMOKDAL_00281 2.3e-27 ypzH
GAMOKDAL_00282 2.5e-161 seaA S YIEGIA protein
GAMOKDAL_00283 1.3e-102 yphA
GAMOKDAL_00284 1e-07 S YpzI-like protein
GAMOKDAL_00285 1.2e-183 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
GAMOKDAL_00286 1.6e-205 rpsA 1.17.7.4 J Ribosomal protein S1
GAMOKDAL_00287 1.2e-110 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
GAMOKDAL_00288 5e-21 S Family of unknown function (DUF5359)
GAMOKDAL_00289 6.6e-111 ypfA M Flagellar protein YcgR
GAMOKDAL_00290 1.9e-253 hemX 2.1.1.107, 4.2.1.75 H sporulation protein
GAMOKDAL_00291 3.3e-153 sleB 3.5.1.28 M Spore cortex-lytic enzyme
GAMOKDAL_00292 2.3e-119 prsW S Involved in the degradation of specific anti-sigma factors
GAMOKDAL_00293 1.3e-174 ypdA 1.18.1.2, 1.19.1.1, 1.8.1.9 O COG0492 Thioredoxin reductase
GAMOKDAL_00294 2.6e-244 gudB 1.4.1.2, 1.4.1.3 E Belongs to the Glu Leu Phe Val dehydrogenases family
GAMOKDAL_00295 2.4e-104 mecB NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
GAMOKDAL_00296 1.8e-147 ypbG S Calcineurin-like phosphoesterase superfamily domain
GAMOKDAL_00297 2.8e-81 ypbF S Protein of unknown function (DUF2663)
GAMOKDAL_00298 1.7e-78 ypbE M Lysin motif
GAMOKDAL_00299 1.1e-99 ypbD S metal-dependent membrane protease
GAMOKDAL_00300 9.2e-286 recQ 3.6.4.12 L DNA helicase
GAMOKDAL_00301 1.8e-198 ypbB 5.1.3.1 S protein conserved in bacteria
GAMOKDAL_00302 4.7e-41 fer C Ferredoxin
GAMOKDAL_00303 5.8e-87 fmnP U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GAMOKDAL_00304 1.5e-294 serA 1.1.1.399, 1.1.1.95 E Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GAMOKDAL_00305 2.5e-133 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
GAMOKDAL_00306 1.5e-184 rsiX
GAMOKDAL_00307 2.6e-103 sigX K Belongs to the sigma-70 factor family. ECF subfamily
GAMOKDAL_00308 0.0 resE 2.7.13.3 T Histidine kinase
GAMOKDAL_00309 6.7e-133 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
GAMOKDAL_00310 8.8e-215 ccsA O 'COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component'
GAMOKDAL_00311 0.0 ccs1 O COG1333 ResB protein required for cytochrome c biosynthesis
GAMOKDAL_00312 1.3e-99 resA CO Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c
GAMOKDAL_00313 6.9e-133 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GAMOKDAL_00314 1.9e-87 spmB S Spore maturation protein
GAMOKDAL_00315 3.5e-103 spmA S Spore maturation protein
GAMOKDAL_00316 8.9e-212 dacB 3.4.16.4 M Belongs to the peptidase S11 family
GAMOKDAL_00317 7.6e-97 ypuI S Protein of unknown function (DUF3907)
GAMOKDAL_00318 2.1e-103 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GAMOKDAL_00319 1.3e-129 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
GAMOKDAL_00320 9.4e-92 ypuF S Domain of unknown function (DUF309)
GAMOKDAL_00321 4.5e-64 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
GAMOKDAL_00322 6.5e-227 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
GAMOKDAL_00323 3.3e-115 ribE 2.5.1.9 H Riboflavin synthase
GAMOKDAL_00324 8.4e-204 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GAMOKDAL_00325 7.8e-55 ypuD
GAMOKDAL_00326 4e-93 sipT 3.4.21.89 U Belongs to the peptidase S26 family
GAMOKDAL_00327 9.8e-14 yhcC S nucleic-acid-binding protein containing a Zn-ribbon domain
GAMOKDAL_00329 8e-81 ppiB 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GAMOKDAL_00330 8.1e-149 ypuA S Secreted protein
GAMOKDAL_00331 5.2e-256 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
GAMOKDAL_00332 1.4e-273 spoVAF EG Stage V sporulation protein AF
GAMOKDAL_00333 1.4e-110 spoVAEA S stage V sporulation protein
GAMOKDAL_00334 2.2e-57 spoVAEB S stage V sporulation protein
GAMOKDAL_00335 9e-192 spoVAD I Stage V sporulation protein AD
GAMOKDAL_00336 2.3e-78 spoVAC S stage V sporulation protein AC
GAMOKDAL_00337 1e-67 spoVAB S Stage V sporulation protein AB
GAMOKDAL_00338 9.6e-112 spoVAA S Stage V sporulation protein AA
GAMOKDAL_00339 2.4e-136 sigF K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
GAMOKDAL_00340 2.3e-75 spoIIAB 2.7.11.1 F Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti-anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition
GAMOKDAL_00341 5e-57 spoIIAA T Belongs to the anti-sigma-factor antagonist family
GAMOKDAL_00342 1.1e-212 dacF 3.4.16.4 M Belongs to the peptidase S11 family
GAMOKDAL_00343 1.7e-148 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
GAMOKDAL_00344 8.8e-231 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
GAMOKDAL_00345 5.7e-166 xerD L recombinase XerD
GAMOKDAL_00346 3.7e-37 S Protein of unknown function (DUF4227)
GAMOKDAL_00347 2.4e-80 fur P Belongs to the Fur family
GAMOKDAL_00348 2.3e-108 spoIIM S Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane
GAMOKDAL_00349 5.5e-30 yqkK
GAMOKDAL_00350 5.5e-242 mleA 1.1.1.38 C malic enzyme
GAMOKDAL_00351 3.2e-232 mleN C Na H antiporter
GAMOKDAL_00352 4.9e-268 aspA 4.2.1.2, 4.3.1.1 E Aspartate ammonia-lyase
GAMOKDAL_00353 3.6e-185 ansA 3.5.1.1 EJ L-asparaginase
GAMOKDAL_00354 4.5e-58 ansR K Transcriptional regulator
GAMOKDAL_00355 5.3e-220 yqxK 3.6.4.12 L DNA helicase
GAMOKDAL_00356 1.2e-92 nudF 3.6.1.13 L Belongs to the Nudix hydrolase family
GAMOKDAL_00358 9.1e-167 yqkF C oxidoreductases (related to aryl-alcohol dehydrogenases)
GAMOKDAL_00359 3.1e-12 yqkE S Protein of unknown function (DUF3886)
GAMOKDAL_00360 3.9e-170 yqkD S COG1073 Hydrolases of the alpha beta superfamily
GAMOKDAL_00361 4.6e-38 yqkC S Protein of unknown function (DUF2552)
GAMOKDAL_00362 2.8e-54 yqkB S Belongs to the HesB IscA family
GAMOKDAL_00363 3.7e-193 yqkA K GrpB protein
GAMOKDAL_00364 1.8e-59 yqjZ 2.3.1.128, 2.5.1.18 S enzyme involved in biosynthesis of extracellular polysaccharides
GAMOKDAL_00365 3.6e-87 yqjY K acetyltransferase
GAMOKDAL_00366 1.7e-49 S YolD-like protein
GAMOKDAL_00367 4.5e-238 polYB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GAMOKDAL_00369 2.9e-224 yqjV G Major Facilitator Superfamily
GAMOKDAL_00371 3e-71 yqjT 3.1.26.4 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GAMOKDAL_00372 2.4e-178 coaA 2.7.1.33 F Pantothenic acid kinase
GAMOKDAL_00373 5.6e-258 dsdA 4.3.1.18 E Belongs to the serine threonine dehydratase family. DsdA subfamily
GAMOKDAL_00374 2.3e-142 yqjQ S Belongs to the short-chain dehydrogenases reductases (SDR) family
GAMOKDAL_00375 2.2e-179 yqjP S COG0491 Zn-dependent hydrolases, including glyoxylases
GAMOKDAL_00376 1.5e-147 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GAMOKDAL_00377 0.0 rocB E arginine degradation protein
GAMOKDAL_00378 1.8e-192 namA 1.6.99.1 C Catalyzes the reduction of the double bond of an array of alpha,beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes
GAMOKDAL_00379 1.8e-144 yqjL S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
GAMOKDAL_00380 3e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
GAMOKDAL_00381 1.1e-172 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
GAMOKDAL_00382 5.2e-289 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GAMOKDAL_00383 2.6e-266 gnd 1.1.1.343, 1.1.1.44 G Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GAMOKDAL_00384 4.2e-231 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GAMOKDAL_00385 4.5e-24 yqzJ
GAMOKDAL_00386 3.2e-139 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GAMOKDAL_00387 4.6e-137 yqjF S Uncharacterized conserved protein (COG2071)
GAMOKDAL_00388 1.6e-202 yqjE 3.4.11.4 E COG2195 Di- and tripeptidases
GAMOKDAL_00389 2.3e-287 mmdA 2.1.3.15, 6.4.1.3 I COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
GAMOKDAL_00390 1.9e-71 mce 4.4.1.5, 5.1.99.1, 5.4.99.2 E COG0346 Lactoylglutathione lyase and related lyases
GAMOKDAL_00392 5.2e-98 yqjB S protein conserved in bacteria
GAMOKDAL_00393 1.2e-172 yqjA S Putative aromatic acid exporter C-terminal domain
GAMOKDAL_00394 2.2e-128 artM 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
GAMOKDAL_00395 6.2e-109 artQ E COG0765 ABC-type amino acid transport system, permease component
GAMOKDAL_00396 4.1e-136 artP ET Belongs to the bacterial solute-binding protein 3 family
GAMOKDAL_00397 9.3e-77 yqiW S Belongs to the UPF0403 family
GAMOKDAL_00398 9.8e-166 yegS 2.7.1.107 I COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
GAMOKDAL_00399 7.9e-208 norA EGP Major facilitator Superfamily
GAMOKDAL_00400 7.5e-152 bmrR K helix_turn_helix, mercury resistance
GAMOKDAL_00401 1.1e-218 bfmBB 2.3.1.168, 2.3.1.61 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
GAMOKDAL_00402 1.8e-184 bfmBAB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
GAMOKDAL_00403 6.1e-185 bfmBAA 1.2.4.4 C COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
GAMOKDAL_00404 1.3e-268 lpdA 1.8.1.4 C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
GAMOKDAL_00405 1.2e-202 buk 2.7.2.7 C Belongs to the acetokinase family
GAMOKDAL_00406 2.2e-207 ldh 1.4.1.9 E Belongs to the Glu Leu Phe Val dehydrogenases family
GAMOKDAL_00407 2.1e-155 pta 2.3.1.19, 2.3.1.8 C phosphate butyryltransferase
GAMOKDAL_00408 0.0 bkdR 2.7.13.3 KT Transcriptional regulator
GAMOKDAL_00409 4e-34 yqzF S Protein of unknown function (DUF2627)
GAMOKDAL_00410 7.1e-164 prpB 4.1.3.30 G Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
GAMOKDAL_00411 4.1e-275 prpD 4.2.1.79 S 2-methylcitrate dehydratase
GAMOKDAL_00412 5.4e-206 prpC 2.3.3.1, 2.3.3.5 C Belongs to the citrate synthase family
GAMOKDAL_00413 2e-211 mmgC I acyl-CoA dehydrogenase
GAMOKDAL_00414 8.3e-154 hbdA 1.1.1.157 I Dehydrogenase
GAMOKDAL_00415 1.9e-217 mmgA 2.3.1.9 I Belongs to the thiolase family
GAMOKDAL_00416 2.4e-130 yqiK 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
GAMOKDAL_00417 5.4e-107 amiC 3.5.1.28 M Cell wall hydrolase autolysin
GAMOKDAL_00418 5.9e-27
GAMOKDAL_00419 3.6e-213 yqiG C COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family
GAMOKDAL_00421 3.2e-144 KT May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process
GAMOKDAL_00422 1.2e-238 rseP 3.4.21.116 M Stage IV sporulation protein B
GAMOKDAL_00423 0.0 recN L May be involved in recombinational repair of damaged DNA
GAMOKDAL_00424 1.7e-78 argR K Regulates arginine biosynthesis genes
GAMOKDAL_00425 6.6e-156 rrmJ 2.1.1.226, 2.1.1.227 J rRNA methylase
GAMOKDAL_00426 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GAMOKDAL_00427 7.7e-163 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GAMOKDAL_00428 5.8e-39 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GAMOKDAL_00429 2.9e-246 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GAMOKDAL_00430 1e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GAMOKDAL_00431 1.9e-65 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GAMOKDAL_00432 2.1e-67 yqhY S protein conserved in bacteria
GAMOKDAL_00433 1.5e-255 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
GAMOKDAL_00434 1.5e-64 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
GAMOKDAL_00435 9.9e-91 spoIIIAH S SpoIIIAH-like protein
GAMOKDAL_00436 2.2e-109 spoIIIAG S stage III sporulation protein AG
GAMOKDAL_00437 3.1e-102 spoIIIAF S Stage III sporulation protein AF (Spore_III_AF)
GAMOKDAL_00438 1.3e-197 spoIIIAE S stage III sporulation protein AE
GAMOKDAL_00439 2.3e-58 spoIIIAD S Stage III sporulation protein AD
GAMOKDAL_00440 7.6e-29 spoIIIAC S stage III sporulation protein AC
GAMOKDAL_00441 4.1e-84 spoIIIAB S Stage III sporulation protein
GAMOKDAL_00442 4e-170 spoIIIAA S stage III sporulation protein AA
GAMOKDAL_00443 7.9e-37 yqhV S Protein of unknown function (DUF2619)
GAMOKDAL_00444 5.4e-98 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GAMOKDAL_00445 4.4e-173 yqhT 3.4.11.9, 3.4.13.9 E COG0006 Xaa-Pro aminopeptidase
GAMOKDAL_00446 1.5e-77 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
GAMOKDAL_00447 2.3e-93 yqhR S Conserved membrane protein YqhR
GAMOKDAL_00448 3e-173 yqhQ S Protein of unknown function (DUF1385)
GAMOKDAL_00449 2.2e-61 yqhP
GAMOKDAL_00450 3.4e-163 yqhO S esterase of the alpha-beta hydrolase superfamily
GAMOKDAL_00451 9.4e-74 mntR K Involved in manganese homeostasis. Might activate the transcription of the mntABCD operon
GAMOKDAL_00452 2.6e-160 lipM 6.3.1.20 H Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation
GAMOKDAL_00453 2.3e-63 yqhL P COG0607 Rhodanese-related sulfurtransferase
GAMOKDAL_00454 1.5e-285 gcvPB 1.4.4.2 E The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
GAMOKDAL_00455 1.4e-253 gcvPA 1.4.4.2 E The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
GAMOKDAL_00456 9e-206 gcvT 1.4.4.2, 2.1.2.10 E The glycine cleavage system catalyzes the degradation of glycine
GAMOKDAL_00457 0.0 yqhH L COG0553 Superfamily II DNA RNA helicases, SNF2 family
GAMOKDAL_00458 2.5e-152 yqhG S Bacterial protein YqhG of unknown function
GAMOKDAL_00459 1.2e-24 sinI S Anti-repressor SinI
GAMOKDAL_00460 1e-54 sinR K transcriptional
GAMOKDAL_00461 1.2e-140 tasA S Cell division protein FtsN
GAMOKDAL_00462 6.7e-59 sipW 3.4.21.89 U Signal peptidase
GAMOKDAL_00463 2.7e-116 yqxM
GAMOKDAL_00464 7.3e-54 yqzG S Protein of unknown function (DUF3889)
GAMOKDAL_00465 1.4e-26 yqzE S YqzE-like protein
GAMOKDAL_00466 4e-44 S ComG operon protein 7
GAMOKDAL_00467 2.9e-34 comGF U Putative Competence protein ComGF
GAMOKDAL_00468 1.1e-59 comGE
GAMOKDAL_00469 4.4e-71 gspH NU protein transport across the cell outer membrane
GAMOKDAL_00470 1.4e-47 comGC U Required for transformation and DNA binding
GAMOKDAL_00471 1.3e-174 comGB NU COG1459 Type II secretory pathway, component PulF
GAMOKDAL_00472 3.9e-201 comGA NU COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
GAMOKDAL_00473 4e-173 corA P Mg2 transporter protein
GAMOKDAL_00474 3.4e-239 corC1 S COG1253 Hemolysins and related proteins containing CBS domains
GAMOKDAL_00475 5.4e-150 yqhA T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
GAMOKDAL_00477 2.7e-64 yqgZ 1.20.4.1 P Belongs to the ArsC family
GAMOKDAL_00478 1.8e-37 yqgY S Protein of unknown function (DUF2626)
GAMOKDAL_00479 7.3e-123 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
GAMOKDAL_00480 8.9e-23 yqgW S Protein of unknown function (DUF2759)
GAMOKDAL_00481 6.9e-50 yqgV S Thiamine-binding protein
GAMOKDAL_00482 2.7e-199 yqgU
GAMOKDAL_00483 2.4e-222 yqgT 3.4.19.11 E Gamma-D-glutamyl-L-diamino acid endopeptidase
GAMOKDAL_00484 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
GAMOKDAL_00485 3.4e-180 glcK 2.7.1.2 G Glucokinase
GAMOKDAL_00486 3.1e-33 yqgQ S Protein conserved in bacteria
GAMOKDAL_00487 5.7e-267 gluP 3.4.21.105 O membrane protein (homolog of Drosophila rhomboid)
GAMOKDAL_00488 2.5e-09 yqgO
GAMOKDAL_00489 2.5e-103 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
GAMOKDAL_00490 9.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
GAMOKDAL_00491 2.7e-194 yqgM 2.4.1.11, 2.4.1.18 GH57,GT4 M Glycosyl transferases group 1
GAMOKDAL_00493 9.2e-51 yqzD
GAMOKDAL_00494 7.3e-72 yqzC S YceG-like family
GAMOKDAL_00495 3.7e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GAMOKDAL_00496 1.4e-147 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GAMOKDAL_00497 4.4e-158 pstA P Phosphate transport system permease
GAMOKDAL_00498 7.1e-159 pstC P probably responsible for the translocation of the substrate across the membrane
GAMOKDAL_00499 6.4e-143 pstS P Phosphate
GAMOKDAL_00500 0.0 pbpA 3.4.16.4 M penicillin-binding protein
GAMOKDAL_00501 2.5e-231 yqgE EGP Major facilitator superfamily
GAMOKDAL_00502 6.3e-116 sodA 1.15.1.1 P radicals which are normally produced within the cells and which are toxic to biological systems
GAMOKDAL_00503 4e-73 yqgC S protein conserved in bacteria
GAMOKDAL_00504 3.9e-131 yqgB S Protein of unknown function (DUF1189)
GAMOKDAL_00505 5.2e-47 yqfZ M LysM domain
GAMOKDAL_00506 2.8e-202 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
GAMOKDAL_00507 2.8e-61 yqfX S membrane
GAMOKDAL_00508 7.9e-108 yqfW S Belongs to the 5'(3')-deoxyribonucleotidase family
GAMOKDAL_00509 1.9e-77 zur P Belongs to the Fur family
GAMOKDAL_00510 1.6e-157 yqfU S Uncharacterized protein conserved in bacteria (DUF2179)
GAMOKDAL_00511 2.1e-36 yqfT S Protein of unknown function (DUF2624)
GAMOKDAL_00512 8.8e-167 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
GAMOKDAL_00513 2.9e-243 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
GAMOKDAL_00514 2.9e-14 yqfQ S YqfQ-like protein
GAMOKDAL_00515 4.5e-177 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
GAMOKDAL_00516 4.8e-210 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
GAMOKDAL_00517 1.4e-116 trmK 2.1.1.217 S SAM-dependent methyltransferase
GAMOKDAL_00518 1.6e-61 cccA C COG2010 Cytochrome c, mono- and diheme variants
GAMOKDAL_00519 1.2e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
GAMOKDAL_00520 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
GAMOKDAL_00521 4.5e-88 yaiI S Belongs to the UPF0178 family
GAMOKDAL_00522 5.8e-149 yqfL 2.7.11.33, 2.7.4.28 S Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
GAMOKDAL_00523 4.5e-112 ccpN K CBS domain
GAMOKDAL_00524 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
GAMOKDAL_00525 3.3e-174 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
GAMOKDAL_00526 1.8e-144 recO L Involved in DNA repair and RecF pathway recombination
GAMOKDAL_00527 8.4e-19 S YqzL-like protein
GAMOKDAL_00528 3.1e-167 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GAMOKDAL_00529 7.1e-71 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
GAMOKDAL_00530 1.8e-60 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
GAMOKDAL_00531 5.1e-81 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GAMOKDAL_00532 0.0 yqfF S membrane-associated HD superfamily hydrolase
GAMOKDAL_00534 2.5e-175 phoH T Phosphate starvation-inducible protein PhoH
GAMOKDAL_00535 1.5e-185 yqfD 3.1.3.102, 3.1.3.104 S Stage IV sporulation
GAMOKDAL_00536 2.7e-45 yqfC S sporulation protein YqfC
GAMOKDAL_00537 3.7e-22 yqfB
GAMOKDAL_00538 4.3e-122 yqfA S UPF0365 protein
GAMOKDAL_00539 1.7e-227 yqeZ O COG1030 Membrane-bound serine protease (ClpP class)
GAMOKDAL_00540 2.5e-61 yqeY S Yqey-like protein
GAMOKDAL_00541 1.2e-19 rpsU J Belongs to the bacterial ribosomal protein bS21 family
GAMOKDAL_00542 4.1e-157 yqeW P COG1283 Na phosphate symporter
GAMOKDAL_00543 2.1e-260 yqeV 2.8.4.5 J ribosomal protein S12 methylthiotransferase
GAMOKDAL_00544 2.1e-140 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
GAMOKDAL_00545 4.6e-174 prmA J Methylates ribosomal protein L11
GAMOKDAL_00546 3.6e-181 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
GAMOKDAL_00547 0.0 dnaK O Heat shock 70 kDa protein
GAMOKDAL_00548 3.8e-75 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GAMOKDAL_00549 4.7e-188 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
GAMOKDAL_00550 2.9e-215 hemN H Involved in the biosynthesis of porphyrin-containing compound
GAMOKDAL_00551 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
GAMOKDAL_00552 3.6e-52 yqxA S Protein of unknown function (DUF3679)
GAMOKDAL_00553 1.5e-222 spoIIP M stage II sporulation protein P
GAMOKDAL_00554 5e-204 gpr 3.4.24.78 C Initiates the rapid degradation of small, acid-soluble proteins during spore germination
GAMOKDAL_00555 9.7e-37 rpsT J Binds directly to 16S ribosomal RNA
GAMOKDAL_00556 9.6e-189 holA 2.7.7.7 L DNA polymerase III delta subunit
GAMOKDAL_00557 4.1e-15 S YqzM-like protein
GAMOKDAL_00558 0.0 comEC S Competence protein ComEC
GAMOKDAL_00559 2.1e-105 comEB 3.5.4.12 F ComE operon protein 2
GAMOKDAL_00560 6.2e-103 wza L COG1555 DNA uptake protein and related DNA-binding proteins
GAMOKDAL_00561 2.1e-146 comER E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GAMOKDAL_00562 1.1e-138 yqeM Q Methyltransferase
GAMOKDAL_00563 1.3e-60 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
GAMOKDAL_00564 3.7e-102 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
GAMOKDAL_00565 2.7e-108 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GAMOKDAL_00566 2.1e-45 yhbY J RNA-binding protein containing KH domain, possibly ribosomal protein
GAMOKDAL_00567 1.7e-156 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
GAMOKDAL_00568 9.1e-214 yqeH S In Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
GAMOKDAL_00569 5.3e-95 yqeG S hydrolase of the HAD superfamily
GAMOKDAL_00571 6.2e-142 yqeF E GDSL-like Lipase/Acylhydrolase
GAMOKDAL_00572 8.9e-136 xlyA 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
GAMOKDAL_00573 3.3e-104 yqeD S SNARE associated Golgi protein
GAMOKDAL_00574 6.1e-168 gnd 1.1.1.343, 1.1.1.44 G 6-phosphogluconate dehydrogenase
GAMOKDAL_00575 5.7e-132 yqeB
GAMOKDAL_00576 1.1e-74 nucB M Deoxyribonuclease NucA/NucB
GAMOKDAL_00577 1.6e-56 sigK K sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
GAMOKDAL_00578 2.4e-58 3.6.1.13 L NUDIX domain
GAMOKDAL_00579 2.1e-277 cisA2 L Recombinase
GAMOKDAL_00580 9.8e-142 yfiE K LysR substrate binding domain
GAMOKDAL_00581 1.8e-83 E LysE type translocator
GAMOKDAL_00582 7.2e-46 K regulatory protein GntR HTH
GAMOKDAL_00583 2.2e-82 H PFAM Dimethylmenaquinone methyltransferase
GAMOKDAL_00584 1.3e-61 dlpA H Aldolase/RraA
GAMOKDAL_00585 1.2e-76 6.2.1.3 H PFAM Dimethylmenaquinone methyltransferase
GAMOKDAL_00586 6e-121 tyrB 2.6.1.1, 2.6.1.57 E Aminotransferase, class I
GAMOKDAL_00588 4.8e-206 ydeG EGP Major facilitator superfamily
GAMOKDAL_00589 8.4e-43 P Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
GAMOKDAL_00590 4.9e-114 M1-798 KP helix_turn_helix, Arsenical Resistance Operon Repressor
GAMOKDAL_00592 8.4e-130 S Aspartate phosphatase response regulator
GAMOKDAL_00593 5.6e-273 A Pre-toxin TG
GAMOKDAL_00594 5.5e-101 S Suppressor of fused protein (SUFU)
GAMOKDAL_00595 7.9e-32
GAMOKDAL_00596 4.5e-136 resA 3.1.21.5 L helicase
GAMOKDAL_00598 5.9e-133 xlyA 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
GAMOKDAL_00599 2.6e-68 S Bacteriophage holin family
GAMOKDAL_00600 9.5e-161 xepA
GAMOKDAL_00601 3.7e-10
GAMOKDAL_00602 4.1e-56 xkdW S XkdW protein
GAMOKDAL_00603 6.1e-218
GAMOKDAL_00604 8.1e-39
GAMOKDAL_00605 2e-95 xkdU S Uncharacterised protein conserved in bacteria (DUF2313)
GAMOKDAL_00606 6.9e-187 xkdT S Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
GAMOKDAL_00607 2.6e-68 xkdS S Protein of unknown function (DUF2634)
GAMOKDAL_00608 2.1e-31 xkdR S Protein of unknown function (DUF2577)
GAMOKDAL_00609 5.1e-176 yqbQ 3.2.1.96 G NLP P60 protein
GAMOKDAL_00610 2.3e-109 xkdP S Lysin motif
GAMOKDAL_00611 0.0 xkdO L Transglycosylase SLT domain
GAMOKDAL_00612 6.2e-68 S Phage XkdN-like tail assembly chaperone protein, TAC
GAMOKDAL_00613 3e-75 xkdM S Phage tail tube protein
GAMOKDAL_00614 4.1e-251 xkdK S Phage tail sheath C-terminal domain
GAMOKDAL_00615 4.6e-25
GAMOKDAL_00616 1.3e-75
GAMOKDAL_00617 1.1e-86 S Bacteriophage HK97-gp10, putative tail-component
GAMOKDAL_00618 4.1e-62 yqbH S Domain of unknown function (DUF3599)
GAMOKDAL_00619 2.1e-67 S Protein of unknown function (DUF3199)
GAMOKDAL_00620 1.2e-46 S YqbF, hypothetical protein domain
GAMOKDAL_00621 3.2e-167 xkdG S Phage capsid family
GAMOKDAL_00622 1.6e-121 yqbD 2.1.1.72 L Putative phage serine protease XkdF
GAMOKDAL_00623 6.5e-25
GAMOKDAL_00624 1.3e-149 S Phage Mu protein F like protein
GAMOKDAL_00625 2.9e-287 yqbA S portal protein
GAMOKDAL_00626 1.5e-247 S phage terminase, large subunit
GAMOKDAL_00627 2.6e-77 yqaS L DNA packaging
GAMOKDAL_00628 6.2e-77
GAMOKDAL_00630 3.9e-22
GAMOKDAL_00631 4.3e-77 L Transposase
GAMOKDAL_00632 1.9e-45 D nuclear chromosome segregation
GAMOKDAL_00633 2.4e-30 yqaO S Phage-like element PBSX protein XtrA
GAMOKDAL_00634 2.6e-71 rusA L Endodeoxyribonuclease RusA
GAMOKDAL_00636 1.1e-163 xkdC L IstB-like ATP binding protein
GAMOKDAL_00637 9.8e-121 3.1.3.16 L DnaD domain protein
GAMOKDAL_00638 6.1e-149 recT L RecT family
GAMOKDAL_00639 3e-173 yqaJ L YqaJ-like viral recombinase domain
GAMOKDAL_00643 5.4e-101
GAMOKDAL_00645 2e-17 K Helix-turn-helix XRE-family like proteins
GAMOKDAL_00646 1.1e-32 K sequence-specific DNA binding
GAMOKDAL_00647 1.4e-11 S Protein of unknown function (DUF4064)
GAMOKDAL_00649 4.4e-94 yqaB E IrrE N-terminal-like domain
GAMOKDAL_00650 6.1e-62 sigK K sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
GAMOKDAL_00651 2e-68 psiE S Protein PsiE homolog
GAMOKDAL_00652 3.8e-235 yrkQ T Histidine kinase
GAMOKDAL_00653 2.6e-126 T Transcriptional regulator
GAMOKDAL_00654 3.4e-222 yrkO P Protein of unknown function (DUF418)
GAMOKDAL_00655 8.7e-104 yrkN K Acetyltransferase (GNAT) family
GAMOKDAL_00656 5.7e-97 ywrO S Flavodoxin-like fold
GAMOKDAL_00657 1.7e-79 S Protein of unknown function with HXXEE motif
GAMOKDAL_00658 2.6e-114 yrkJ S membrane transporter protein
GAMOKDAL_00659 6e-35 yrkI O Belongs to the sulfur carrier protein TusA family
GAMOKDAL_00660 4.9e-207 yrkH P Rhodanese Homology Domain
GAMOKDAL_00661 1.7e-99 yrkF OP Belongs to the sulfur carrier protein TusA family
GAMOKDAL_00662 2.8e-82 yrkE O DsrE/DsrF/DrsH-like family
GAMOKDAL_00663 7.8e-39 yrkD S protein conserved in bacteria
GAMOKDAL_00664 1.9e-20
GAMOKDAL_00665 3.8e-107 yrkC G Cupin domain
GAMOKDAL_00666 6.9e-150 bltR K helix_turn_helix, mercury resistance
GAMOKDAL_00667 2.5e-209 blt EGP Major facilitator Superfamily
GAMOKDAL_00668 9.1e-83 bltD 2.3.1.57 K FR47-like protein
GAMOKDAL_00669 3.7e-230 corC1 S COG1253 Hemolysins and related proteins containing CBS domains
GAMOKDAL_00670 8.7e-16 S YrzO-like protein
GAMOKDAL_00671 1.7e-168 yrdR EG EamA-like transporter family
GAMOKDAL_00672 3.9e-159 yrdQ K Transcriptional regulator
GAMOKDAL_00673 3.3e-197 trkA P Oxidoreductase
GAMOKDAL_00674 7.7e-153 czcD P COG1230 Co Zn Cd efflux system component
GAMOKDAL_00675 1.5e-16 yodA S tautomerase
GAMOKDAL_00676 2.5e-226 brnQ E Component of the transport system for branched-chain amino acids
GAMOKDAL_00677 2.5e-50 azlD E Branched-chain amino acid transport protein (AzlD)
GAMOKDAL_00678 2.8e-137 azlC E AzlC protein
GAMOKDAL_00679 5.3e-78 bkdR K helix_turn_helix ASNC type
GAMOKDAL_00680 2.6e-40 yrdF K ribonuclease inhibitor
GAMOKDAL_00681 7.3e-228 cypA C Cytochrome P450
GAMOKDAL_00682 5e-99 yrdC 3.5.1.19 Q Isochorismatase family
GAMOKDAL_00683 2.6e-54 S Protein of unknown function (DUF2568)
GAMOKDAL_00684 6.4e-90 yrdA S DinB family
GAMOKDAL_00685 7.2e-166 aadK G Streptomycin adenylyltransferase
GAMOKDAL_00686 3.2e-192 yrpB 1.13.12.16 S COG2070 Dioxygenases related to 2-nitropropane dioxygenase
GAMOKDAL_00687 1.9e-144 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
GAMOKDAL_00688 8.7e-125 yrpD S Domain of unknown function, YrpD
GAMOKDAL_00689 1.5e-100 K helix_turn_helix gluconate operon transcriptional repressor
GAMOKDAL_00691 1.3e-209 rbtT P Major Facilitator Superfamily
GAMOKDAL_00692 2.4e-112 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
GAMOKDAL_00693 3.8e-152 2.2.1.1 G Transketolase, pyrimidine binding domain
GAMOKDAL_00694 4.4e-136 tktA 2.2.1.1 G COG3959 Transketolase, N-terminal subunit
GAMOKDAL_00696 3.2e-219 yfjF U Belongs to the major facilitator superfamily
GAMOKDAL_00697 1.8e-65 napB K MarR family transcriptional regulator
GAMOKDAL_00698 8.7e-115 adcA S ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
GAMOKDAL_00699 7.7e-94 sigZ K Belongs to the sigma-70 factor family. ECF subfamily
GAMOKDAL_00700 1.9e-186 yrpG C Aldo/keto reductase family
GAMOKDAL_00701 4e-150 csn 3.2.1.132 M Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan
GAMOKDAL_00702 3.8e-41 yraL S COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
GAMOKDAL_00703 9.9e-149 S Alpha beta hydrolase
GAMOKDAL_00704 4.9e-60 T sh3 domain protein
GAMOKDAL_00705 2.4e-61 T sh3 domain protein
GAMOKDAL_00706 1.3e-66 E Glyoxalase-like domain
GAMOKDAL_00707 5.3e-37 yraG
GAMOKDAL_00708 6.4e-63 yraF M Spore coat protein
GAMOKDAL_00709 1.1e-219 adhB 1.1.1.1, 1.1.1.14, 1.1.1.284, 1.2.1.46 E COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
GAMOKDAL_00710 1.7e-25 yraE
GAMOKDAL_00711 1.1e-49 yraD M Spore coat protein
GAMOKDAL_00712 4.3e-47 yraB K helix_turn_helix, mercury resistance
GAMOKDAL_00713 4e-24 yphJ 4.1.1.44 S peroxiredoxin activity
GAMOKDAL_00714 2.8e-196 adhA 1.1.1.1 C alcohol dehydrogenase
GAMOKDAL_00715 5e-90 yhbO 1.11.1.6, 3.5.1.124 S protease
GAMOKDAL_00716 0.0 sacC 3.2.1.26, 3.2.1.65, 3.2.1.80 GH32 G Belongs to the glycosyl hydrolase 32 family
GAMOKDAL_00717 1.5e-152 manZ G COG3716 Phosphotransferase system, mannose fructose N-acetylgalactosamine-specific component IID
GAMOKDAL_00718 4.9e-116 manY G COG3715 Phosphotransferase system, mannose fructose N-acetylgalactosamine-specific component IIC
GAMOKDAL_00719 6.3e-82 levE 2.7.1.202 G PTS system mannose fructose sorbose family
GAMOKDAL_00720 3.9e-75 levD 2.7.1.202 G PTS system fructose IIA component
GAMOKDAL_00721 0.0 levR K PTS system fructose IIA component
GAMOKDAL_00722 3.3e-253 cycA E COG1113 Gamma-aminobutyrate permease and related permeases
GAMOKDAL_00723 1.4e-105 yrhP E LysE type translocator
GAMOKDAL_00724 4.1e-150 yrhO K Archaeal transcriptional regulator TrmB
GAMOKDAL_00725 4.3e-86 sigV K Belongs to the sigma-70 factor family. ECF subfamily
GAMOKDAL_00726 6.1e-149 rsiV S Protein of unknown function (DUF3298)
GAMOKDAL_00727 0.0 yrhL I Acyltransferase family
GAMOKDAL_00728 1.2e-43 yrhK S YrhK-like protein
GAMOKDAL_00729 0.0 cypD 1.14.14.1, 1.6.2.4 C Belongs to the cytochrome P450 family
GAMOKDAL_00730 3.3e-101 Z012_03230 K Tetracycline repressor, C-terminal all-alpha domain
GAMOKDAL_00731 7.2e-95 yrhH Q methyltransferase
GAMOKDAL_00734 1.8e-142 focA P Formate nitrite
GAMOKDAL_00735 2.3e-60 yrhF S Uncharacterized conserved protein (DUF2294)
GAMOKDAL_00736 0.0 fdhA 1.17.1.10, 1.17.1.9 C formate dehydrogenase (NAD+) activity
GAMOKDAL_00737 1.4e-78 yrhD S Protein of unknown function (DUF1641)
GAMOKDAL_00738 4.6e-35 yrhC S YrhC-like protein
GAMOKDAL_00739 7.5e-211 mccB 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
GAMOKDAL_00740 2.3e-170 mccA 2.5.1.134, 2.5.1.47 E Cysteine synthase
GAMOKDAL_00741 9.4e-124 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GAMOKDAL_00742 2.2e-119 yrrT 4.4.1.21 Q Could be a S-adenosyl-L-methionine-dependent methyltransferase
GAMOKDAL_00743 1e-25 yrzA S Protein of unknown function (DUF2536)
GAMOKDAL_00744 4.5e-57 yrrS S Protein of unknown function (DUF1510)
GAMOKDAL_00745 0.0 pbpI 3.4.16.4 M Penicillin-binding Protein
GAMOKDAL_00746 2.4e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GAMOKDAL_00747 5.9e-12
GAMOKDAL_00750 2.3e-128 xlyA 3.5.1.28 CBM50 M N-acetylmuramoyl-L-alanine amidase
GAMOKDAL_00751 6.7e-55 S Bacteriophage holin family
GAMOKDAL_00754 1.2e-85
GAMOKDAL_00755 2.1e-61
GAMOKDAL_00756 9.4e-102 mur1 NU Prophage endopeptidase tail
GAMOKDAL_00757 3.9e-44 S Phage tail protein
GAMOKDAL_00758 1.2e-147 D Phage-related minor tail protein
GAMOKDAL_00760 8.1e-50 S phage major tail protein, phi13 family
GAMOKDAL_00761 2.5e-17
GAMOKDAL_00762 7.2e-15 S Bacteriophage HK97-gp10, putative tail-component
GAMOKDAL_00763 2.1e-07 S head-tail adaptor
GAMOKDAL_00764 7.7e-11 S Phage gp6-like head-tail connector protein
GAMOKDAL_00765 8.5e-94 S Phage capsid family
GAMOKDAL_00766 9.3e-48 S Caudovirus prohead serine protease
GAMOKDAL_00767 4.3e-105 S Phage portal protein
GAMOKDAL_00768 1.7e-150 S Phage Terminase
GAMOKDAL_00769 2e-17
GAMOKDAL_00770 1.1e-27 L HNH endonuclease
GAMOKDAL_00772 3.4e-07 S Phage-related minor tail protein
GAMOKDAL_00775 8.3e-60 L Phage integrase family
GAMOKDAL_00776 4e-51 wecC 1.1.1.336 M ArpU family transcriptional regulator
GAMOKDAL_00780 3.9e-60
GAMOKDAL_00783 9.5e-76
GAMOKDAL_00789 8.7e-32
GAMOKDAL_00790 3.3e-08
GAMOKDAL_00792 3.1e-52 dnaC L DNA replication protein
GAMOKDAL_00793 1.6e-69 L dnaD_dom DnaD domain protein
GAMOKDAL_00796 7e-08 K Cupin domain
GAMOKDAL_00797 2.4e-28 K Helix-turn-helix XRE-family like proteins
GAMOKDAL_00799 1.7e-48
GAMOKDAL_00800 6.9e-63 S Phage integrase family
GAMOKDAL_00801 1.2e-112 udk 2.7.1.48 F Cytidine monophosphokinase
GAMOKDAL_00802 2.7e-246 yegQ O COG0826 Collagenase and related proteases
GAMOKDAL_00803 4.3e-172 yegQ O Peptidase U32
GAMOKDAL_00804 1.7e-119 yrrM 2.1.1.104 S O-methyltransferase
GAMOKDAL_00805 1.6e-183 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GAMOKDAL_00806 1.2e-45 yrzB S Belongs to the UPF0473 family
GAMOKDAL_00807 2.1e-70 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GAMOKDAL_00808 1.7e-41 yrzL S Belongs to the UPF0297 family
GAMOKDAL_00809 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GAMOKDAL_00810 2.7e-170 yrrI S AI-2E family transporter
GAMOKDAL_00811 1.9e-130 glnQ 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
GAMOKDAL_00812 4.8e-143 glnH ET Belongs to the bacterial solute-binding protein 3 family
GAMOKDAL_00813 1.8e-108 gluC P ABC transporter
GAMOKDAL_00814 7.6e-107 glnP P ABC transporter
GAMOKDAL_00815 8e-08 S Protein of unknown function (DUF3918)
GAMOKDAL_00816 9.8e-31 yrzR
GAMOKDAL_00817 1.7e-81 yrrD S protein conserved in bacteria
GAMOKDAL_00818 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
GAMOKDAL_00819 1.4e-15 S COG0457 FOG TPR repeat
GAMOKDAL_00820 2.5e-219 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
GAMOKDAL_00821 2.2e-210 iscS 2.8.1.7 E Cysteine desulfurase
GAMOKDAL_00822 1.2e-70 cymR K Transcriptional regulator
GAMOKDAL_00823 1.1e-234 rarA L COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase
GAMOKDAL_00824 9e-136 yrvM H COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
GAMOKDAL_00825 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
GAMOKDAL_00826 9.8e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
GAMOKDAL_00828 1.1e-262 lytH 3.5.1.28 M COG3103 SH3 domain protein
GAMOKDAL_00829 2.9e-70 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GAMOKDAL_00830 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GAMOKDAL_00831 5.9e-91 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GAMOKDAL_00832 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
GAMOKDAL_00833 1.3e-48 yrvD S Lipopolysaccharide assembly protein A domain
GAMOKDAL_00834 1.7e-87 yrvC P regulatory, ligand-binding protein related to C-terminal domains of K channels
GAMOKDAL_00835 0.0 secF U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
GAMOKDAL_00836 1.6e-48 yrzD S Post-transcriptional regulator
GAMOKDAL_00837 2.4e-268 spoVB S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
GAMOKDAL_00838 1.7e-111 yrbG S membrane
GAMOKDAL_00839 2.2e-73 yrzE S Protein of unknown function (DUF3792)
GAMOKDAL_00840 8e-39 yajC U Preprotein translocase subunit YajC
GAMOKDAL_00841 5.2e-228 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
GAMOKDAL_00842 7.5e-194 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
GAMOKDAL_00843 2.6e-18 yrzS S Protein of unknown function (DUF2905)
GAMOKDAL_00844 6.6e-187 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
GAMOKDAL_00845 1.6e-106 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
GAMOKDAL_00846 4.8e-93 bofC S BofC C-terminal domain
GAMOKDAL_00847 4.5e-252 csbX EGP Major facilitator Superfamily
GAMOKDAL_00848 1.7e-193 iolG 1.1.1.18, 1.1.1.369 S Oxidoreductase family, NAD-binding Rossmann fold
GAMOKDAL_00849 6.5e-119 yrzF T serine threonine protein kinase
GAMOKDAL_00851 2.3e-51 S Family of unknown function (DUF5412)
GAMOKDAL_00852 5.3e-262 alsT E Sodium alanine symporter
GAMOKDAL_00853 3.6e-126 yebC K transcriptional regulatory protein
GAMOKDAL_00854 1.3e-49 S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
GAMOKDAL_00855 8.3e-157 safA M spore coat assembly protein SafA
GAMOKDAL_00856 4.1e-214 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
GAMOKDAL_00857 8.1e-157 nadC 1.4.3.16, 2.4.2.19 H Belongs to the NadC ModD family
GAMOKDAL_00858 7e-300 nadB 1.3.5.4, 1.4.3.16 H Catalyzes the oxidation of L-aspartate to iminoaspartate
GAMOKDAL_00859 5.9e-227 nifS 2.8.1.7 E Cysteine desulfurase
GAMOKDAL_00860 3.6e-94 niaR S small molecule binding protein (contains 3H domain)
GAMOKDAL_00861 7.6e-163 pheA 4.2.1.51 E Prephenate dehydratase
GAMOKDAL_00862 2.2e-73 pheB 5.4.99.5 S Belongs to the UPF0735 family
GAMOKDAL_00863 5.6e-231 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GAMOKDAL_00864 1.5e-106 spo0B T Sporulation initiation phospho-transferase B, C-terminal
GAMOKDAL_00865 2.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
GAMOKDAL_00866 4.1e-56 ysxB J ribosomal protein
GAMOKDAL_00867 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
GAMOKDAL_00868 9.2e-161 spoIVFB S Stage IV sporulation protein
GAMOKDAL_00869 8.5e-145 spoIVFA M COG0739 Membrane proteins related to metalloendopeptidases
GAMOKDAL_00870 2.5e-144 minD D Belongs to the ParA family
GAMOKDAL_00871 1.4e-108 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
GAMOKDAL_00872 1.4e-84 mreD M shape-determining protein
GAMOKDAL_00873 2.8e-157 mreC M Involved in formation and maintenance of cell shape
GAMOKDAL_00874 1.8e-184 mreB D Rod shape-determining protein MreB
GAMOKDAL_00875 1.5e-124 radC E Belongs to the UPF0758 family
GAMOKDAL_00876 2.8e-102 maf D septum formation protein Maf
GAMOKDAL_00877 3.8e-166 spoIIB S Sporulation related domain
GAMOKDAL_00878 3.3e-84 comC 3.4.23.43 NOU COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases
GAMOKDAL_00879 9.6e-247 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
GAMOKDAL_00880 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
GAMOKDAL_00881 1.6e-25
GAMOKDAL_00882 1.3e-198 ysxE S A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
GAMOKDAL_00883 1.6e-220 spoVID M stage VI sporulation protein D
GAMOKDAL_00884 1.6e-246 hemL 5.4.3.8 H Glutamate-1-semialdehyde aminotransferase
GAMOKDAL_00885 2.8e-182 hemB 4.2.1.24 H Belongs to the ALAD family
GAMOKDAL_00886 2.4e-144 hemD 2.1.1.107, 4.2.1.75 H Uroporphyrinogen-III synthase
GAMOKDAL_00887 8.7e-173 hemC 2.1.1.107, 2.5.1.61, 4.2.1.75 H Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps
GAMOKDAL_00888 3.6e-146 hemX O cytochrome C
GAMOKDAL_00889 3.5e-247 hemA 1.2.1.70 H Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
GAMOKDAL_00890 3.2e-89 ysxD
GAMOKDAL_00891 1.2e-106 engB D Necessary for normal cell division and for the maintenance of normal septation
GAMOKDAL_00892 0.0 lon 3.4.21.53 O ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
GAMOKDAL_00893 1.7e-24 lon 3.4.21.53 O ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
GAMOKDAL_00894 9.2e-311 lonB 2.7.7.7, 3.4.21.53 LO Belongs to the peptidase S16 family
GAMOKDAL_00895 3.4e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GAMOKDAL_00896 1.8e-226 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
GAMOKDAL_00897 1.1e-186 ysoA H Tetratricopeptide repeat
GAMOKDAL_00898 7.6e-114 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
GAMOKDAL_00899 1.7e-276 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
GAMOKDAL_00900 5.7e-200 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
GAMOKDAL_00901 9.3e-289 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GAMOKDAL_00902 3.1e-192 ilvC 1.1.1.86 EH Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
GAMOKDAL_00903 3.2e-84 ilvN 2.2.1.6 E Acetolactate synthase
GAMOKDAL_00904 0.0 ilvB 2.2.1.6 E Acetolactate synthase
GAMOKDAL_00906 9.6e-77 ysnE K acetyltransferase
GAMOKDAL_00907 2.9e-132 ysnF S protein conserved in bacteria
GAMOKDAL_00909 5.3e-92 ysnB S Phosphoesterase
GAMOKDAL_00910 7.7e-103 rdgB 3.6.1.66 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GAMOKDAL_00911 1.8e-133 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
GAMOKDAL_00912 5e-196 gerM S COG5401 Spore germination protein
GAMOKDAL_00913 4.3e-152 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
GAMOKDAL_00914 2.3e-75 ysmB 2.4.2.28 K helix_turn_helix multiple antibiotic resistance protein
GAMOKDAL_00917 2e-08
GAMOKDAL_00918 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GAMOKDAL_00919 1.2e-48 yqaB E IrrE N-terminal-like domain
GAMOKDAL_00920 8.5e-20
GAMOKDAL_00921 9.4e-25 K sequence-specific DNA binding
GAMOKDAL_00922 3.2e-13 K Helix-turn-helix XRE-family like proteins
GAMOKDAL_00924 9.1e-45 S DNA binding
GAMOKDAL_00925 8.6e-83
GAMOKDAL_00930 5.8e-97
GAMOKDAL_00931 3.4e-69 pi112 3.6.4.12 L PDDEXK-like domain of unknown function (DUF3799)
GAMOKDAL_00932 8.7e-37 3.1.3.16 L DnaD domain protein
GAMOKDAL_00933 2.2e-121 xkdC L IstB-like ATP binding protein
GAMOKDAL_00935 1.1e-11 S YopX protein
GAMOKDAL_00937 6.8e-54 S Protein of unknown function (DUF1064)
GAMOKDAL_00939 4.2e-27 yqaO S Phage-like element PBSX protein XtrA
GAMOKDAL_00942 3.3e-59
GAMOKDAL_00944 2e-12 S YopX protein
GAMOKDAL_00950 1.9e-80 L Transposase
GAMOKDAL_00953 4.4e-74 yqaS L DNA packaging
GAMOKDAL_00954 8.8e-186 ps334 S Terminase-like family
GAMOKDAL_00955 1.7e-156 S Phage portal protein, SPP1 Gp6-like
GAMOKDAL_00957 2.7e-55 S Domain of unknown function (DUF4355)
GAMOKDAL_00958 5.6e-124 S Phage capsid family
GAMOKDAL_00960 2.4e-31 S Phage Mu protein F like protein
GAMOKDAL_00961 1.5e-18 S Phage gp6-like head-tail connector protein
GAMOKDAL_00962 1.8e-47
GAMOKDAL_00963 2.4e-23
GAMOKDAL_00964 3.1e-30
GAMOKDAL_00965 4.2e-104 Z012_02110 S Protein of unknown function (DUF3383)
GAMOKDAL_00966 1.8e-34
GAMOKDAL_00967 1.7e-13
GAMOKDAL_00968 4.5e-137 N phage tail tape measure protein
GAMOKDAL_00969 3e-40 3.5.1.28 M LysM domain
GAMOKDAL_00970 2.4e-30
GAMOKDAL_00971 3.6e-89
GAMOKDAL_00972 6.1e-23
GAMOKDAL_00973 4.8e-23 S Protein of unknown function (DUF2634)
GAMOKDAL_00974 3e-106 Z012_12235 S homolog of phage Mu protein gp47
GAMOKDAL_00975 1.3e-60
GAMOKDAL_00976 1.4e-45 S Domain of unknown function (DUF2479)
GAMOKDAL_00978 1e-14 xkdX
GAMOKDAL_00979 1.1e-27 xhlA S Haemolysin XhlA
GAMOKDAL_00980 2.7e-31 xhlB S SPP1 phage holin
GAMOKDAL_00981 8.3e-103 xlyA 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
GAMOKDAL_00982 7.9e-37 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
GAMOKDAL_00983 1.1e-42 S YolD-like protein
GAMOKDAL_00984 5.2e-167 L Recombinase
GAMOKDAL_00985 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GAMOKDAL_00986 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GAMOKDAL_00987 1.8e-37 yaaB S Domain of unknown function (DUF370)
GAMOKDAL_00988 1.4e-206 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GAMOKDAL_00989 2.4e-33 yaaA S S4 domain
GAMOKDAL_00990 1.8e-204 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
GAMOKDAL_00991 6e-252 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GAMOKDAL_00992 3e-54 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
GAMOKDAL_00993 1.7e-118 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GAMOKDAL_00994 6.5e-108 jag S single-stranded nucleic acid binding R3H
GAMOKDAL_00995 8.3e-249 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
GAMOKDAL_00996 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
GAMOKDAL_00997 1.4e-130 rsmG 2.1.1.170 J Specifically methylates the N7 position of guanine in position 535 of 16S rRNA
GAMOKDAL_00998 1.9e-150 noc D Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage
GAMOKDAL_00999 1.5e-74 S Bacterial PH domain
GAMOKDAL_01000 2.2e-134 soj D COG1192 ATPases involved in chromosome partitioning
GAMOKDAL_01001 2.1e-149 spo0J K Belongs to the ParB family
GAMOKDAL_01002 1.6e-111 yyaC S Sporulation protein YyaC
GAMOKDAL_01003 2.3e-176 yyaD S Membrane
GAMOKDAL_01004 2.3e-33 yyzM S protein conserved in bacteria
GAMOKDAL_01005 0.0 yyaE C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
GAMOKDAL_01006 4e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
GAMOKDAL_01007 4.3e-46 rpsF J Binds together with S18 to 16S ribosomal RNA
GAMOKDAL_01008 2.9e-69 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
GAMOKDAL_01009 5.1e-37 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GAMOKDAL_01010 4e-144 xth 3.1.11.2 L exodeoxyribonuclease III
GAMOKDAL_01011 8.1e-179 ccpB 3.5.1.4, 5.1.1.1 K Transcriptional regulator
GAMOKDAL_01012 1.7e-66 yyaH 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GAMOKDAL_01013 1.1e-93 maa 2.3.1.79 S Bacterial transferase hexapeptide (six repeats)
GAMOKDAL_01014 2.7e-244 EGP Major facilitator superfamily
GAMOKDAL_01015 3.6e-168 yyaK S CAAX protease self-immunity
GAMOKDAL_01016 0.0 yyaL O COG1331 Highly conserved protein containing a thioredoxin domain
GAMOKDAL_01017 2.9e-157 yyaM EG EamA-like transporter family
GAMOKDAL_01018 1.5e-60 yyaN K MerR HTH family regulatory protein
GAMOKDAL_01019 6.7e-22 yyaR K acetyltransferase
GAMOKDAL_01020 1.5e-106 yyaP 1.5.1.3 H RibD C-terminal domain
GAMOKDAL_01021 3.5e-66 yyaQ S YjbR
GAMOKDAL_01022 7.6e-94 yyaR K Acetyltransferase (GNAT) domain
GAMOKDAL_01023 1.4e-96 yyaS S Membrane
GAMOKDAL_01024 7.6e-71 yjcF S Acetyltransferase (GNAT) domain
GAMOKDAL_01025 5.6e-77 yybA 2.3.1.57 K transcriptional
GAMOKDAL_01026 6.6e-127 S Metallo-beta-lactamase superfamily
GAMOKDAL_01027 6.6e-76 yybC
GAMOKDAL_01028 5.5e-77 yjcF S Acetyltransferase (GNAT) domain
GAMOKDAL_01029 3.4e-163 yybE K Transcriptional regulator
GAMOKDAL_01030 3e-218 ynfM EGP Major facilitator Superfamily
GAMOKDAL_01031 1.7e-119 yybG S Pentapeptide repeat-containing protein
GAMOKDAL_01032 6.5e-66 yybH S SnoaL-like domain
GAMOKDAL_01033 2.4e-123
GAMOKDAL_01034 4.8e-110 K TipAS antibiotic-recognition domain
GAMOKDAL_01035 1.8e-240 yybO G COG0477 Permeases of the major facilitator superfamily
GAMOKDAL_01037 1.5e-58
GAMOKDAL_01038 1.1e-164 ppaC 3.6.1.1 C Inorganic pyrophosphatase
GAMOKDAL_01039 1.4e-68 ydeP3 K Transcriptional regulator
GAMOKDAL_01040 3.9e-84 cotF M Spore coat protein
GAMOKDAL_01042 2.9e-160 yybS S membrane
GAMOKDAL_01043 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
GAMOKDAL_01044 2.2e-73 rplI J binds to the 23S rRNA
GAMOKDAL_01045 0.0 yycA M COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
GAMOKDAL_01046 8.4e-221 yeaN P COG2807 Cyanate permease
GAMOKDAL_01047 1.9e-15 yycC K YycC-like protein
GAMOKDAL_01049 1.9e-29 yycD S Uncharacterized protein conserved in bacteria (DUF2188)
GAMOKDAL_01050 3e-251 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
GAMOKDAL_01051 4.9e-75 yycE 3.4.21.26, 5.3.1.24 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GAMOKDAL_01052 3e-248 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GAMOKDAL_01057 1.1e-132 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
GAMOKDAL_01058 0.0 vicK 2.7.13.3 T Histidine kinase
GAMOKDAL_01059 4.4e-258 yycH S protein conserved in bacteria
GAMOKDAL_01060 7.3e-155 yycI S protein conserved in bacteria
GAMOKDAL_01061 1.9e-149 vicX 3.1.26.11 S COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I
GAMOKDAL_01062 3e-218 htrA 3.4.21.107 O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GAMOKDAL_01063 1.3e-257 rocR KT COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
GAMOKDAL_01064 2.1e-232 rocD 2.6.1.11, 2.6.1.13, 2.6.1.17 E Catalyzes the interconversion of ornithine to glutamate semialdehyde
GAMOKDAL_01065 9.7e-261 rocE E amino acid
GAMOKDAL_01066 4e-167 rocF 3.5.3.1, 3.5.3.11 E Belongs to the arginase family
GAMOKDAL_01068 1.5e-187 S aspartate phosphatase
GAMOKDAL_01069 1.9e-83 yycN 2.3.1.128 K Acetyltransferase
GAMOKDAL_01070 1.1e-130 yycO S Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
GAMOKDAL_01071 4.6e-208 yycP
GAMOKDAL_01072 3.3e-31 yycQ S Protein of unknown function (DUF2651)
GAMOKDAL_01074 3e-234 fdhA 1.1.1.1, 1.1.1.14, 1.1.1.284, 1.2.1.46 E COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
GAMOKDAL_01075 1.2e-62
GAMOKDAL_01076 1.1e-09 S YyzF-like protein
GAMOKDAL_01077 6.8e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GAMOKDAL_01078 0.0 3.6.4.12 L DNA helicase
GAMOKDAL_01079 1.1e-129 addA 3.6.4.12 L PD-(D/E)XK nuclease superfamily
GAMOKDAL_01080 5.2e-153 mod 2.1.1.72 L DNA methylase
GAMOKDAL_01081 0.0 res 3.1.21.5 V Type III restriction enzyme, res subunit
GAMOKDAL_01082 0.0 fbp 3.1.3.11 G Firmicute fructose-1,6-bisphosphatase
GAMOKDAL_01083 8e-12
GAMOKDAL_01084 2.2e-184 S Radical SAM superfamily
GAMOKDAL_01085 3.5e-132 yydH O Peptidase M50
GAMOKDAL_01086 1e-108 prrC P ABC transporter
GAMOKDAL_01087 8e-118 S ABC-2 family transporter protein
GAMOKDAL_01088 5.6e-11
GAMOKDAL_01089 8.7e-125 yydK K Transcriptional regulator
GAMOKDAL_01090 9e-19 bglF G phosphotransferase system
GAMOKDAL_01091 4.1e-291 bglA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GAMOKDAL_01092 5.6e-189 wgaE S Polysaccharide pyruvyl transferase
GAMOKDAL_01093 3.8e-287 ahpF O Alkyl hydroperoxide reductase
GAMOKDAL_01094 2.1e-105 ahpC 1.11.1.15 O Alkyl hydroperoxide reductase
GAMOKDAL_01095 3.8e-273 gnd 1.1.1.343, 1.1.1.44 G Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GAMOKDAL_01096 4.5e-231 gntP EG COG2610 H gluconate symporter and related permeases
GAMOKDAL_01097 3.9e-303 gntK 2.7.1.12, 2.7.1.17, 2.7.1.5 G Belongs to the FGGY kinase family
GAMOKDAL_01098 7.3e-127 gntR K transcriptional
GAMOKDAL_01099 1.8e-204 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
GAMOKDAL_01100 1.7e-193 yxaB GM Polysaccharide pyruvyl transferase
GAMOKDAL_01101 2.6e-118 yxaC M effector of murein hydrolase
GAMOKDAL_01102 5.2e-50 S LrgA family
GAMOKDAL_01103 4.4e-71 yxaD K helix_turn_helix multiple antibiotic resistance protein
GAMOKDAL_01104 7.3e-200 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
GAMOKDAL_01105 3e-99 yxaF K Transcriptional regulator
GAMOKDAL_01106 7.1e-197 yxaG 1.13.11.24 S AraC-like ligand binding domain
GAMOKDAL_01107 1.6e-224 P Protein of unknown function (DUF418)
GAMOKDAL_01108 1.4e-75 yxaI S membrane protein domain
GAMOKDAL_01109 4.8e-62 S Family of unknown function (DUF5391)
GAMOKDAL_01110 2.2e-91 S PQQ-like domain
GAMOKDAL_01111 9.1e-30 yxaI S membrane protein domain
GAMOKDAL_01112 2.4e-245 alkH 1.2.1.3 C Belongs to the aldehyde dehydrogenase family
GAMOKDAL_01113 4e-196 yxbF K Bacterial regulatory proteins, tetR family
GAMOKDAL_01114 9.6e-102 M HlyD family secretion protein
GAMOKDAL_01115 6.1e-238 V Peptidase C39 family
GAMOKDAL_01118 7.5e-149 IQ Enoyl-(Acyl carrier protein) reductase
GAMOKDAL_01120 0.0 htpG O Molecular chaperone. Has ATPase activity
GAMOKDAL_01121 2.1e-244 csbC EGP Major facilitator Superfamily
GAMOKDAL_01122 8.3e-48 yxcD S Protein of unknown function (DUF2653)
GAMOKDAL_01124 8.3e-176 iolS C Aldo keto reductase
GAMOKDAL_01125 3.3e-138 iolR K COG1349 Transcriptional regulators of sugar metabolism
GAMOKDAL_01126 3.9e-281 iolA 1.2.1.18, 1.2.1.27 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
GAMOKDAL_01127 3.5e-154 iolB 5.3.1.30 G Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate)
GAMOKDAL_01128 2.5e-178 iolC 2.7.1.92 G Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP)
GAMOKDAL_01129 0.0 iolD 3.7.1.22 E Involved in the cleavage of the C1-C2 bond of 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy- glucuronate (5DG)
GAMOKDAL_01130 1.8e-175 iolE 4.2.1.44 G Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6 3,5-pentahydroxycyclohexanone) to 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol)
GAMOKDAL_01131 5.1e-235 iolF EGP Major facilitator Superfamily
GAMOKDAL_01132 2.8e-196 iolG 1.1.1.18, 1.1.1.369 S Involved in the oxidation of myo-inositol (MI) and D- chiro-inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D-chiro-inositol (1KDCI), respectively
GAMOKDAL_01133 8.6e-167 iolH G Xylose isomerase-like TIM barrel
GAMOKDAL_01134 5.6e-147 iolI 5.3.99.11 G Involved in the reversible interconverion of 2-keto-myo- inositol (2KMI, inosose or 2,4,6 3,5-pentahydroxycyclohexanone) to 1-keto-D-chiro-inositol (1KDCI or 2,3,5 4,6- pentahydroxycyclohexanone)
GAMOKDAL_01135 4.6e-160 iolJ 4.1.2.13, 4.1.2.29 F Produces dihydroxyacetone phosphate (DHAP or glycerone phosphate) and malonic semialdehyde (MSA or 3-oxopropanoate) from 6-phospho-5-dehydro-2-deoxy-D-gluconate (DKGP)
GAMOKDAL_01136 4.2e-124 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
GAMOKDAL_01137 3.4e-180 T PhoQ Sensor
GAMOKDAL_01138 2.2e-137 yxdL V ABC transporter, ATP-binding protein
GAMOKDAL_01139 0.0 yxdM V ABC transporter (permease)
GAMOKDAL_01140 5.9e-58 yxeA S Protein of unknown function (DUF1093)
GAMOKDAL_01141 5.6e-175 fhuD P ABC transporter
GAMOKDAL_01142 1.4e-68
GAMOKDAL_01143 5.6e-16 yxeD
GAMOKDAL_01144 1.3e-20 yxeE
GAMOKDAL_01147 2.6e-149 yidA S hydrolases of the HAD superfamily
GAMOKDAL_01148 6.1e-185 yxeI 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
GAMOKDAL_01149 6.3e-254 yxeK C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GAMOKDAL_01150 7.3e-94 yxeL K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
GAMOKDAL_01151 3.6e-143 yxeM M Belongs to the bacterial solute-binding protein 3 family
GAMOKDAL_01152 2.7e-107 yxeN P COG0765 ABC-type amino acid transport system, permease component
GAMOKDAL_01153 5.4e-133 yxeO 3.6.3.21 P ABC transporter, ATP-binding protein
GAMOKDAL_01154 5.2e-212 yxeP 3.5.1.47 E hydrolase activity
GAMOKDAL_01155 1.1e-250 yxeQ S MmgE/PrpD family
GAMOKDAL_01156 3.2e-198 eutH E Ethanolamine utilisation protein, EutH
GAMOKDAL_01157 4.4e-152 yxxB S Domain of Unknown Function (DUF1206)
GAMOKDAL_01158 3.5e-174 deoR K COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
GAMOKDAL_01159 2e-115 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
GAMOKDAL_01160 1.7e-205 nupC F Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
GAMOKDAL_01161 8.7e-232 pdp 2.4.2.2, 2.4.2.4 F phosphorylase
GAMOKDAL_01162 2.3e-251 lysP E amino acid
GAMOKDAL_01163 3.7e-179 hutG 3.5.3.11, 3.5.3.8 E Catalyzes the conversion of N-formimidoyl-L-glutamate to L-glutamate and formamide
GAMOKDAL_01164 3.7e-235 hutI 3.5.2.7 Q Imidazolone-5-propionate hydrolase
GAMOKDAL_01165 0.0 hutU 4.2.1.49 E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
GAMOKDAL_01166 6.8e-284 hutH 4.3.1.3 E Histidine ammonia-lyase
GAMOKDAL_01167 5e-78 hutP K Antiterminator that binds to cis-acting regulatory sequences on the mRNA in the presence of histidine, thereby suppressing transcription termination and activating the hut operon for histidine utilization
GAMOKDAL_01168 2.5e-277 yxiA 3.2.1.99 GH43 G Belongs to the glycosyl hydrolase 43 family
GAMOKDAL_01169 2.3e-20 S Domain of unknown function (DUF5082)
GAMOKDAL_01170 1.4e-38 yxiC S Family of unknown function (DUF5344)
GAMOKDAL_01171 3e-125 S nuclease activity
GAMOKDAL_01173 7.3e-19 S Protein conserved in bacteria
GAMOKDAL_01175 8.3e-136 S nuclease activity
GAMOKDAL_01176 5.5e-53
GAMOKDAL_01177 0.0 bglF 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
GAMOKDAL_01178 4.6e-279 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GAMOKDAL_01179 1.1e-72 yxiE T Belongs to the universal stress protein A family
GAMOKDAL_01180 1.6e-163 yxxF EG EamA-like transporter family
GAMOKDAL_01181 0.0 wapA M COG3209 Rhs family protein
GAMOKDAL_01182 7.6e-16 yxiG
GAMOKDAL_01183 8.3e-13 yxiG
GAMOKDAL_01184 1e-135
GAMOKDAL_01185 4.3e-83 yxiI S Protein of unknown function (DUF2716)
GAMOKDAL_01186 7.7e-43 yxiJ S YxiJ-like protein
GAMOKDAL_01189 8e-213 3.2.1.14 GH18 E GDSL-like Lipase/Acylhydrolase
GAMOKDAL_01190 1.9e-264 dbpA 3.6.4.13 JKL DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes
GAMOKDAL_01191 1.2e-230 yxiO S COG2270 Permeases of the major facilitator superfamily
GAMOKDAL_01192 6.6e-114
GAMOKDAL_01193 8.3e-151 licT K transcriptional antiterminator
GAMOKDAL_01194 7.3e-143 exoK GH16 M licheninase activity
GAMOKDAL_01195 6.6e-224 citH C Citrate transporter
GAMOKDAL_01196 0.0 katE 1.11.1.6, 3.5.1.124 P serves to protect cells from the toxic effects of hydrogen peroxide
GAMOKDAL_01197 5.7e-21 yxiS
GAMOKDAL_01198 2.2e-101 T Domain of unknown function (DUF4163)
GAMOKDAL_01199 1.9e-212 nupG F Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
GAMOKDAL_01200 3.9e-156 rlmA 2.1.1.187 Q Methyltransferase domain
GAMOKDAL_01201 2.6e-253 yxjC EG COG2610 H gluconate symporter and related permeases
GAMOKDAL_01202 1.2e-129 scoA 2.8.3.5 I COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
GAMOKDAL_01203 5.2e-116 scoB 2.8.3.5 I COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
GAMOKDAL_01204 2.8e-137 IQ Catalyzes the formation of acetoacetate from 3-hydroxybutyrate
GAMOKDAL_01205 3.7e-218 yxjG 2.1.1.14 E Methionine synthase
GAMOKDAL_01206 9.7e-219 yxjG 2.1.1.14 E Methionine synthase
GAMOKDAL_01207 6e-85 yxjI S LURP-one-related
GAMOKDAL_01209 1e-234 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
GAMOKDAL_01210 4.1e-113 K helix_turn_helix, Lux Regulon
GAMOKDAL_01211 4.9e-192 yxjM T Signal transduction histidine kinase
GAMOKDAL_01212 2.4e-78 S Protein of unknown function (DUF1453)
GAMOKDAL_01213 9.6e-166 yxjO K LysR substrate binding domain
GAMOKDAL_01214 1.3e-95 yxkA S Phosphatidylethanolamine-binding protein
GAMOKDAL_01215 1.3e-195 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
GAMOKDAL_01216 4.1e-73 yxkC S Domain of unknown function (DUF4352)
GAMOKDAL_01217 1.9e-147 yxkD S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GAMOKDAL_01218 4.3e-272 aldY 1.2.1.3 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
GAMOKDAL_01219 5.4e-164 lrp QT PucR C-terminal helix-turn-helix domain
GAMOKDAL_01220 5.9e-205 msmK P Belongs to the ABC transporter superfamily
GAMOKDAL_01221 1e-08 P transporter
GAMOKDAL_01224 4.3e-155 yxkH G Polysaccharide deacetylase
GAMOKDAL_01226 5.1e-309 3.4.24.84 O Peptidase family M48
GAMOKDAL_01227 2.7e-228 cimH C COG3493 Na citrate symporter
GAMOKDAL_01228 1.3e-268 cydA 1.10.3.14 C oxidase, subunit
GAMOKDAL_01229 8.4e-190 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase, subunit II
GAMOKDAL_01230 1.4e-309 cydD V ATP-binding
GAMOKDAL_01231 0.0 cydD V ATP-binding protein
GAMOKDAL_01232 1.6e-157 nnrD 4.2.1.136, 5.1.99.6 G Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GAMOKDAL_01233 1.5e-253 yxlA F Belongs to the purine-cytosine permease (2.A.39) family
GAMOKDAL_01234 1.1e-90 sigY K Belongs to the sigma-70 factor family. ECF subfamily
GAMOKDAL_01235 8.1e-46 yxlC S Family of unknown function (DUF5345)
GAMOKDAL_01236 2.2e-28
GAMOKDAL_01237 1e-27 yxlE S Phospholipase_D-nuclease N-terminal
GAMOKDAL_01238 4.4e-166 yxlF V ABC transporter, ATP-binding protein
GAMOKDAL_01239 2.6e-138 yxlG S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
GAMOKDAL_01240 2.9e-213 yxlH EGP Major facilitator Superfamily
GAMOKDAL_01241 0.0 katX 1.11.1.6 P serves to protect cells from the toxic effects of hydrogen peroxide
GAMOKDAL_01242 1e-110 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
GAMOKDAL_01243 1.1e-19 yxzF
GAMOKDAL_01244 0.0 licR 2.7.1.202 GKT Mga helix-turn-helix domain
GAMOKDAL_01245 2.3e-50 licB 2.7.1.196, 2.7.1.205 G transporter subunit IIB
GAMOKDAL_01246 8.2e-249 licC G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GAMOKDAL_01247 9.1e-38 licA 2.7.1.196, 2.7.1.205 G phosphotransferase system
GAMOKDAL_01248 1.7e-251 licH 3.2.1.86 GT4 G COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
GAMOKDAL_01249 3.1e-206 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
GAMOKDAL_01250 4.7e-137 dltE M Belongs to the short-chain dehydrogenases reductases (SDR) family
GAMOKDAL_01251 2.3e-231 dltD M COG3966 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
GAMOKDAL_01252 1.5e-36 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GAMOKDAL_01253 1.2e-232 dltB M membrane protein involved in D-alanine export
GAMOKDAL_01254 1.1e-291 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GAMOKDAL_01255 5.4e-167 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
GAMOKDAL_01256 5e-116 ywaC 2.7.6.5 S protein conserved in bacteria
GAMOKDAL_01257 9.8e-129 ynfM EGP Major facilitator Superfamily
GAMOKDAL_01258 3.2e-49 4.1.1.44 S Carboxymuconolactone decarboxylase family
GAMOKDAL_01259 1.1e-92 K Helix-turn-helix XRE-family like proteins
GAMOKDAL_01260 2e-250 ywaD 3.4.11.10, 3.4.11.6 S PA domain
GAMOKDAL_01261 1.3e-229 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GAMOKDAL_01262 4e-87 ywaE K Transcriptional regulator
GAMOKDAL_01263 1.4e-122 ywaF S Integral membrane protein
GAMOKDAL_01264 1.5e-166 gspA M General stress
GAMOKDAL_01265 2.4e-150 sacY K transcriptional antiterminator
GAMOKDAL_01266 2.6e-242 scrA 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
GAMOKDAL_01267 1.7e-271 epr 3.4.21.62 O Belongs to the peptidase S8 family
GAMOKDAL_01268 2.8e-241 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GAMOKDAL_01269 4.3e-22 ywbB S Protein of unknown function (DUF2711)
GAMOKDAL_01270 2.4e-83 ywbB S Protein of unknown function (DUF2711)
GAMOKDAL_01271 3.1e-12 nanM N LysM domain
GAMOKDAL_01272 1.3e-88 G Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
GAMOKDAL_01273 4.4e-67 ywbC 4.4.1.5 E glyoxalase
GAMOKDAL_01274 3.1e-220 ywbD 2.1.1.191 J Methyltransferase
GAMOKDAL_01275 5.2e-27 ywbE S Uncharacterized conserved protein (DUF2196)
GAMOKDAL_01276 1.3e-208 ywbF EGP Major facilitator Superfamily
GAMOKDAL_01277 2.3e-111 ywbG M effector of murein hydrolase
GAMOKDAL_01278 3.7e-58 ywbH S Increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation. Inhibited by the antiholin-like proteins LrgAB. In an unstressed cell, the LrgAB products probably inhibit the function of the CidA protein. When a cell is stressed by the addition of antibiotics or by other factors in the environment, CidA possibly oligomerizes within the bacterial cell membrane, creating lesions that disrupt the proton motive force, which in turn results in loss of cell viability. These lesions are also hypothesized to regulate the subsequent cell lysis by either allowing the murein hydrolases access to the cell wall substrate and or regulating their activity by a
GAMOKDAL_01279 4.3e-153 ywbI K Transcriptional regulator
GAMOKDAL_01280 2.8e-143 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
GAMOKDAL_01281 4.1e-116 thiE 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
GAMOKDAL_01282 2.9e-252 P COG0672 High-affinity Fe2 Pb2 permease
GAMOKDAL_01283 9.3e-185 ycdO P periplasmic lipoprotein involved in iron transport
GAMOKDAL_01284 9.3e-223 ywbN P Dyp-type peroxidase family protein
GAMOKDAL_01285 2.8e-111 ywbO Q dithiol-disulfide isomerase involved in polyketide biosynthesis
GAMOKDAL_01286 1.4e-268 ywcA S Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GAMOKDAL_01287 9.8e-49 ywcB S Protein of unknown function, DUF485
GAMOKDAL_01289 1.1e-121 ywcC K transcriptional regulator
GAMOKDAL_01290 9.5e-60 gtcA S GtrA-like protein
GAMOKDAL_01291 2e-227 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
GAMOKDAL_01292 7.8e-304 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
GAMOKDAL_01293 1e-35 ywzA S membrane
GAMOKDAL_01294 2.1e-177 cyoA 1.10.3.10, 1.10.3.12 C Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I
GAMOKDAL_01295 0.0 qoxB 1.10.3.12, 1.9.3.1 C Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
GAMOKDAL_01296 1.2e-111 qoxC 1.10.3.12, 1.9.3.1 C quinol oxidase, subunit
GAMOKDAL_01297 2.6e-64 qoxD 1.10.3.12, 1.9.3.1 C quinol oxidase, subunit
GAMOKDAL_01298 1.7e-38 ywcE S Required for proper spore morphogenesis. Important for spore germination
GAMOKDAL_01299 2.9e-202 rodA D Belongs to the SEDS family
GAMOKDAL_01300 1.4e-136 nfrA 1.5.1.38, 1.5.1.39 C Oxidoreductase
GAMOKDAL_01301 3.6e-185 ywcH C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GAMOKDAL_01302 0.0 vpr O Belongs to the peptidase S8 family
GAMOKDAL_01304 4.8e-137 sacT K transcriptional antiterminator
GAMOKDAL_01305 1e-139 focA P Formate/nitrite transporter
GAMOKDAL_01306 1.6e-252 scrA 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
GAMOKDAL_01307 1.5e-293 scrB 3.2.1.26, 3.2.1.65, 3.2.1.80 GH32 G invertase
GAMOKDAL_01308 2e-28 ywdA
GAMOKDAL_01309 9.3e-147 thiD 2.5.1.3, 2.7.1.35, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
GAMOKDAL_01310 2.8e-57 pex K Transcriptional regulator PadR-like family
GAMOKDAL_01311 5.2e-113 ywdD
GAMOKDAL_01313 2.3e-150 ywdF GT2,GT4 S Glycosyltransferase like family 2
GAMOKDAL_01314 3.3e-129 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GAMOKDAL_01315 1.6e-260 ywdH 1.2.1.3 C Belongs to the aldehyde dehydrogenase family
GAMOKDAL_01316 1.5e-47 ywdI S Family of unknown function (DUF5327)
GAMOKDAL_01317 8.3e-238 ywdJ F Xanthine uracil
GAMOKDAL_01318 4.3e-59 ywdK S small membrane protein
GAMOKDAL_01319 4.8e-75 gerQ S Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA
GAMOKDAL_01320 2.6e-143 spsA M Spore Coat
GAMOKDAL_01321 4.3e-269 spsB M Capsule polysaccharide biosynthesis protein
GAMOKDAL_01322 3e-223 spsC E Belongs to the DegT DnrJ EryC1 family
GAMOKDAL_01323 1.2e-163 spsD 2.3.1.210 K Spore Coat
GAMOKDAL_01324 3.5e-213 spsE 2.5.1.56 M acid synthase
GAMOKDAL_01325 3.5e-129 spsF M Spore Coat
GAMOKDAL_01326 1e-187 spsG M Spore Coat
GAMOKDAL_01327 3.5e-137 spsI 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
GAMOKDAL_01328 5.1e-181 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
GAMOKDAL_01329 4.5e-160 spsK 1.1.1.133 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
GAMOKDAL_01330 1.3e-86 spsL 5.1.3.13 M Spore Coat
GAMOKDAL_01331 1.2e-77
GAMOKDAL_01332 1.3e-243 rocG 1.4.1.2, 1.4.1.3 E Belongs to the Glu Leu Phe Val dehydrogenases family
GAMOKDAL_01333 4.6e-296 putA 1.2.1.88, 1.5.5.2 C Belongs to the aldehyde dehydrogenase family. RocA subfamily
GAMOKDAL_01334 0.0 rocB E arginine degradation protein
GAMOKDAL_01335 1.1e-248 lysP E amino acid
GAMOKDAL_01336 8.7e-205 ywfA EGP Major facilitator Superfamily
GAMOKDAL_01337 8.6e-113 pheA 1.1.1.3, 1.3.1.12, 4.1.1.100, 4.2.1.51, 5.4.99.5 E Part of the bacABCDEF operon responsible for the biosynthesis of the nonribosomally synthesized dipeptide antibiotic bacilysin, composed of L-alanine and L-anticapsin. Bacilysin is an irreversible inactivator of the glutaminase domain of glucosamine synthetase. BacA is an unusual prephenate decarboxylase that avoids the typical aromatization of the cyclohexadienol ring of prephenate. BacA catalyzes the protonation of prephenate (1-carboxy-4-hydroxy-alpha-oxo-2,5-cyclohexadiene-1- propanoic acid) at C6 position, followed by a decarboxylation to produce the endocyclic-delta(4),delta(8)-7R-dihydro- hydroxyphenylpyruvate (en-H2HPP). En-H2HPP is able to undergo a slow nonenzymatic isomerization to produce the exocyclic- delta(3),delta(5)-dihydro-hydroxyphenylpyruvate (ex-H2HPP). BacA isomerizes only the pro-R double bond in prephenate
GAMOKDAL_01338 6.4e-136 bacB 5.3.3.19, 5.4.99.5 S Part of the bacABCDEF operon responsible for the biosynthesis of the nonribosomally synthesized dipeptide antibiotic bacilysin, composed of L-alanine and L-anticapsin. Bacilysin is an irreversible inactivator of the glutaminase domain of glucosamine synthetase. BacB catalyzes the allylic isomerization of the
GAMOKDAL_01339 1.3e-09 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
GAMOKDAL_01340 1.7e-120 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
GAMOKDAL_01341 3.6e-271 purD 6.3.2.49, 6.3.4.13 F Part of the bacABCDEFG operon responsible for the biosynthesis of bacilysin, an irreversible inactivator of the glutaminase domain of glucosamine synthetase. Catalyzes the formation of alpha-dipeptides from various L-amino acids in the presence of ATP. In vivo catalyzes the ligation of L-alanine and L-anticapsin (epoxycyclohexanonyl-Ala) to produce the final bacilysin antibiotic (L-Ala-L-4S-cyclohexenonyl-Ala dipeptide)
GAMOKDAL_01342 7.3e-209 bacE EGP Major facilitator Superfamily
GAMOKDAL_01343 1.6e-232 ywfG 2.6.1.83 E Aminotransferase class I and II
GAMOKDAL_01344 1.4e-136 IQ Enoyl-(Acyl carrier protein) reductase
GAMOKDAL_01345 1.1e-146 ywfI C May function as heme-dependent peroxidase
GAMOKDAL_01346 5.6e-175 pta 2.3.1.19, 2.3.1.8, 3.6.3.21 C In Salmonella this enzyme is required for ethanolamine catabolism
GAMOKDAL_01347 1.1e-156 cysL K Transcriptional regulator
GAMOKDAL_01348 1.5e-155 lipL 2.3.1.200, 2.3.1.204 H Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes
GAMOKDAL_01349 3.4e-158 ywfM EG EamA-like transporter family
GAMOKDAL_01350 1.7e-110 rsfA_1
GAMOKDAL_01351 3.1e-36 ywzC S Belongs to the UPF0741 family
GAMOKDAL_01352 5.1e-256 ywfO S COG1078 HD superfamily phosphohydrolases
GAMOKDAL_01353 5.4e-89 ywgA 2.1.1.72, 3.1.21.3
GAMOKDAL_01354 5.3e-78 yffB K Transcriptional regulator
GAMOKDAL_01355 1e-238 mmr U Major Facilitator Superfamily
GAMOKDAL_01357 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GAMOKDAL_01358 9.5e-71 ywhA K Transcriptional regulator
GAMOKDAL_01359 2.7e-25 dmpI 5.3.2.6 G 4-oxalocrotonate tautomerase
GAMOKDAL_01360 5.1e-119 ywhC S Peptidase family M50
GAMOKDAL_01361 3.4e-94 ywhD S YwhD family
GAMOKDAL_01362 3.6e-49
GAMOKDAL_01363 0.0 pbpG 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
GAMOKDAL_01364 1.4e-158 speE 2.5.1.16 E Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
GAMOKDAL_01365 9.2e-169 speB 3.5.3.11 E Belongs to the arginase family
GAMOKDAL_01366 1.2e-49 ywhH S Aminoacyl-tRNA editing domain
GAMOKDAL_01368 4.4e-78 S aspartate phosphatase
GAMOKDAL_01369 2.5e-189 ywhK CO amine dehydrogenase activity
GAMOKDAL_01370 8.6e-246 ywhL CO amine dehydrogenase activity
GAMOKDAL_01372 1.7e-248 L Peptidase, M16
GAMOKDAL_01373 1.6e-216 2.7.1.26, 2.7.7.2 L Peptidase, M16
GAMOKDAL_01374 4.7e-233 mgtA 3.6.3.2 P ATPase, P-type transporting, HAD superfamily, subfamily IC
GAMOKDAL_01375 3.7e-131 cbiO V ABC transporter
GAMOKDAL_01377 4.9e-270 C Fe-S oxidoreductases
GAMOKDAL_01378 1e-07 S Bacteriocin subtilosin A
GAMOKDAL_01379 4.7e-73 ywiB S protein conserved in bacteria
GAMOKDAL_01380 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
GAMOKDAL_01381 2.3e-213 narK P COG2223 Nitrate nitrite transporter
GAMOKDAL_01382 2.6e-129 fnr K helix_turn_helix, cAMP Regulatory protein
GAMOKDAL_01383 1.7e-139 ywiC S YwiC-like protein
GAMOKDAL_01384 7e-86 arfM T cyclic nucleotide binding
GAMOKDAL_01385 0.0 narG 1.7.5.1 C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
GAMOKDAL_01386 1.9e-296 narH 1.7.5.1 C Nitrate reductase, beta
GAMOKDAL_01387 1.1e-93 narJ 1.7.5.1 C nitrate reductase
GAMOKDAL_01388 3.1e-124 narI 1.7.5.1 C nitrate reductase, gamma
GAMOKDAL_01389 1.6e-285 ywiE I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GAMOKDAL_01390 0.0 ywjA V ABC transporter
GAMOKDAL_01391 7.3e-91 ywjB H RibD C-terminal domain
GAMOKDAL_01392 1.8e-41 ywjC
GAMOKDAL_01393 7.3e-183 uvsE L Component in a DNA repair pathway. Removal of UV-light damaged nucleotides. Recognizes pyrimidine dimers and cleave a phosphodiester bond immediately 5' to the lesion
GAMOKDAL_01394 1.5e-222 clsB I Belongs to the phospholipase D family. Cardiolipin synthase subfamily
GAMOKDAL_01395 0.0 fadF C COG0247 Fe-S oxidoreductase
GAMOKDAL_01396 9.1e-209 acdA 1.3.8.1, 1.3.8.7 I acyl-CoA dehydrogenase
GAMOKDAL_01397 4.8e-48 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
GAMOKDAL_01398 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
GAMOKDAL_01399 2.3e-90 ywjG S Domain of unknown function (DUF2529)
GAMOKDAL_01400 1.1e-62 spo0F T COG0784 FOG CheY-like receiver
GAMOKDAL_01401 7.2e-158 fbaA 4.1.2.13, 4.1.2.29 G Aldolase
GAMOKDAL_01402 1.5e-112 tal 2.2.1.2 G Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
GAMOKDAL_01403 8.6e-240 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GAMOKDAL_01404 1.9e-175 glpX 3.1.3.11, 3.1.3.37 G fructose-1,6-bisphosphatase
GAMOKDAL_01405 2.8e-238 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
GAMOKDAL_01406 1.1e-32 rpmE J Binds the 23S rRNA
GAMOKDAL_01407 5.4e-104 tdk 2.7.1.21 F thymidine kinase
GAMOKDAL_01408 0.0 sfcA 1.1.1.38 C malic enzyme
GAMOKDAL_01409 8.6e-160 ywkB S Membrane transport protein
GAMOKDAL_01410 1.6e-89 racA K Required for the formation of axial filaments and for anchoring the origin regions at the cell poles in sporulating cells, thus ensuring proper chromosome segregation in the prespore. Binds in a dispersed manner throughout the chromosome but preferentially to sites clustered in the origin portion of the chromosome, causing condensation of the chromosome and its remodeling into an elongated, anchored structure
GAMOKDAL_01411 6.9e-68 yaeR E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GAMOKDAL_01412 9.5e-192 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GAMOKDAL_01413 1.2e-155 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
GAMOKDAL_01415 3.7e-55 ywlA S Uncharacterised protein family (UPF0715)
GAMOKDAL_01416 3e-111 spoIIR S stage II sporulation protein R
GAMOKDAL_01417 1.2e-76 ywlB 1.20.4.1, 2.3.1.1 E Belongs to the acetyltransferase family. ArgA subfamily
GAMOKDAL_01418 1.8e-195 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
GAMOKDAL_01419 1.7e-91 mntP P Probably functions as a manganese efflux pump
GAMOKDAL_01420 1.3e-76 ywlE 3.1.3.48, 3.9.1.2, 5.3.1.6 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
GAMOKDAL_01421 1.7e-81 rpiB 5.3.1.6 G Ribose 5-phosphate isomerase
GAMOKDAL_01422 7.2e-95 ywlG S Belongs to the UPF0340 family
GAMOKDAL_01423 1.7e-237 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
GAMOKDAL_01424 4.7e-114 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GAMOKDAL_01425 2.5e-62 atpI S ATP synthase
GAMOKDAL_01426 4.6e-129 atpB C it plays a direct role in the translocation of protons across the membrane
GAMOKDAL_01427 1.6e-26 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GAMOKDAL_01428 3.8e-45 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GAMOKDAL_01429 1.1e-90 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GAMOKDAL_01430 6.9e-281 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GAMOKDAL_01431 1.1e-150 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GAMOKDAL_01432 1.2e-266 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GAMOKDAL_01433 9.4e-52 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
GAMOKDAL_01434 4.8e-87 ywmA
GAMOKDAL_01435 1.3e-32 ywzB S membrane
GAMOKDAL_01436 8.2e-134 ywmB S TATA-box binding
GAMOKDAL_01437 1.2e-241 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GAMOKDAL_01438 9.2e-176 spoIID D Stage II sporulation protein D
GAMOKDAL_01439 1.7e-122 ywmC S protein containing a von Willebrand factor type A (vWA) domain
GAMOKDAL_01440 7.2e-121 ywmD S protein containing a von Willebrand factor type A (vWA) domain
GAMOKDAL_01442 7.6e-146 fdhD C Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
GAMOKDAL_01443 2e-191 moaA 4.1.99.22, 4.6.1.17 H Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
GAMOKDAL_01444 1.3e-103 S response regulator aspartate phosphatase
GAMOKDAL_01445 3e-84 ywmF S Peptidase M50
GAMOKDAL_01446 3.2e-10 csbD K CsbD-like
GAMOKDAL_01448 6.3e-51 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
GAMOKDAL_01449 2.2e-63 ureB 3.5.1.5 E Belongs to the urease beta subunit family
GAMOKDAL_01450 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
GAMOKDAL_01451 1.7e-64 ywnA K Transcriptional regulator
GAMOKDAL_01452 4e-113 ywnB S NAD(P)H-binding
GAMOKDAL_01453 2.6e-59 ywnC S Family of unknown function (DUF5362)
GAMOKDAL_01454 2.6e-143 mta K transcriptional
GAMOKDAL_01455 1.2e-277 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GAMOKDAL_01456 2.2e-70 ywnF S Family of unknown function (DUF5392)
GAMOKDAL_01457 3.4e-09 ywnC S Family of unknown function (DUF5362)
GAMOKDAL_01458 1.2e-88 ywnH 2.3.1.183 M COG1247 Sortase and related acyltransferases
GAMOKDAL_01459 6.9e-116 spoIIQ M COG0739 Membrane proteins related to metalloendopeptidases
GAMOKDAL_01460 1.6e-70 ywnJ S VanZ like family
GAMOKDAL_01461 3.4e-103 bcrC 3.6.1.27 I COG0671 Membrane-associated phospholipid phosphatase
GAMOKDAL_01462 1.6e-58 nrgB K Belongs to the P(II) protein family
GAMOKDAL_01463 4.3e-225 amt P Ammonium transporter
GAMOKDAL_01464 2.2e-76
GAMOKDAL_01465 4e-104 phzA Q Isochorismatase family
GAMOKDAL_01466 9.8e-242 ywoD EGP Major facilitator superfamily
GAMOKDAL_01467 3.4e-280 ybbW FH COG1953 Cytosine uracil thiamine allantoin permeases
GAMOKDAL_01468 1.4e-230 ywoF P Right handed beta helix region
GAMOKDAL_01469 4.4e-203 ywoG EGP Major facilitator Superfamily
GAMOKDAL_01470 2.1e-70 ywoH K COG1846 Transcriptional regulators
GAMOKDAL_01471 3e-44 spoIIID K Stage III sporulation protein D
GAMOKDAL_01472 3.5e-180 mbl D Rod shape-determining protein
GAMOKDAL_01473 1.5e-125 flhO N flagellar basal body
GAMOKDAL_01474 2.6e-141 flhP N flagellar basal body
GAMOKDAL_01475 4.4e-197 S aspartate phosphatase
GAMOKDAL_01476 4.6e-82 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
GAMOKDAL_01477 1.3e-48 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GAMOKDAL_01478 0.0 ywpD T PhoQ Sensor
GAMOKDAL_01479 3.1e-174 M1-574 T Transcriptional regulatory protein, C terminal
GAMOKDAL_01480 0.0 M1-568 M cell wall anchor domain
GAMOKDAL_01481 6.7e-84 srtA 3.4.22.70 M Sortase family
GAMOKDAL_01482 1.1e-66 ywpF S YwpF-like protein
GAMOKDAL_01483 1.3e-66 ywpG
GAMOKDAL_01484 3.7e-57 ssbB L Single-stranded DNA-binding protein
GAMOKDAL_01485 3.4e-138 glcR K COG1349 Transcriptional regulators of sugar metabolism
GAMOKDAL_01486 1.8e-156 ywpJ 3.1.3.104 S hydrolases of the HAD superfamily
GAMOKDAL_01487 0.0 ywqA L COG0553 Superfamily II DNA RNA helicases, SNF2 family
GAMOKDAL_01488 4.6e-307 ywqB S SWIM zinc finger
GAMOKDAL_01489 1.2e-17
GAMOKDAL_01490 5.9e-116 ywqC M biosynthesis protein
GAMOKDAL_01491 4.9e-117 ywqD 2.7.10.1 D COG0489 ATPases involved in chromosome partitioning
GAMOKDAL_01492 7.4e-138 ywqE 3.1.3.48 GM COG4464 Capsular polysaccharide biosynthesis protein
GAMOKDAL_01493 9.8e-247 ugd 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
GAMOKDAL_01494 1.4e-152 ywqG S Domain of unknown function (DUF1963)
GAMOKDAL_01495 9.7e-23 S Domain of unknown function (DUF5082)
GAMOKDAL_01496 1.3e-38 ywqI S Family of unknown function (DUF5344)
GAMOKDAL_01497 7.1e-243 ywqJ S Pre-toxin TG
GAMOKDAL_01498 1.7e-25
GAMOKDAL_01499 8.7e-117 nfi 3.1.21.7 L DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA
GAMOKDAL_01500 1.3e-88 ywrA P COG2059 Chromate transport protein ChrA
GAMOKDAL_01501 1.2e-103 ywrB P Chromate transporter
GAMOKDAL_01502 8e-82 ywrC K Transcriptional regulator
GAMOKDAL_01503 3e-303 ggt 2.3.2.2, 3.4.19.13 E gamma-glutamyltransferase
GAMOKDAL_01504 2.7e-52 S Domain of unknown function (DUF4181)
GAMOKDAL_01505 6.9e-110 ywrF S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GAMOKDAL_01506 1.3e-12
GAMOKDAL_01507 6.2e-207 cotH M Spore Coat
GAMOKDAL_01508 9.3e-124 cotB
GAMOKDAL_01509 1.7e-122 ywrJ
GAMOKDAL_01510 1.4e-218 ywrK P Involved in arsenical resistance. Thought to form the channel of an arsenite pump
GAMOKDAL_01511 1.1e-169 alsR K LysR substrate binding domain
GAMOKDAL_01512 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
GAMOKDAL_01513 6.3e-145 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
GAMOKDAL_01514 9.7e-97 ywrO S NADPH-quinone reductase (modulator of drug activity B)
GAMOKDAL_01515 8e-48 ywsA S Protein of unknown function (DUF3892)
GAMOKDAL_01516 8.7e-93 batE T Sh3 type 3 domain protein
GAMOKDAL_01517 9.1e-159 rbsB G COG1879 ABC-type sugar transport system, periplasmic component
GAMOKDAL_01518 1.2e-153 rbsC G Belongs to the binding-protein-dependent transport system permease family
GAMOKDAL_01519 8.6e-276 rbsA 3.6.3.17 G Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system
GAMOKDAL_01520 1.4e-63 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
GAMOKDAL_01521 3.9e-159 rbsK 2.7.1.15, 2.7.1.4 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GAMOKDAL_01522 9.3e-178 rbsR K transcriptional
GAMOKDAL_01523 6.1e-224 murD 6.3.2.9 M COG0769 UDP-N-acetylmuramyl tripeptide synthase
GAMOKDAL_01524 8.6e-70 pgsC S biosynthesis protein
GAMOKDAL_01525 6.3e-218 capA M enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
GAMOKDAL_01526 3.6e-21 ywtC
GAMOKDAL_01527 3.5e-239 pgdS CBM50 M COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
GAMOKDAL_01528 2.7e-160 ywtE 3.1.3.104 S hydrolases of the HAD superfamily
GAMOKDAL_01529 2.3e-168 ywtF K Transcriptional regulator
GAMOKDAL_01530 1.2e-247 ywtG EGP Major facilitator Superfamily
GAMOKDAL_01531 2.7e-205 gerAC S Spore germination protein
GAMOKDAL_01532 4e-193 gerBB E Spore germination protein
GAMOKDAL_01533 3.7e-263 gerBA EG Spore germination protein
GAMOKDAL_01534 3.3e-188 pmi 5.3.1.8 G mannose-6-phosphate isomerase
GAMOKDAL_01535 8.9e-215 atl 3.2.1.96, 3.5.1.28 GH73 G Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
GAMOKDAL_01536 5.7e-192 tarL 2.7.8.14, 2.7.8.47 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
GAMOKDAL_01537 3.3e-89 2.7.8.46 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
GAMOKDAL_01538 6.2e-148 tarJ 1.1.1.137, 1.1.1.303, 1.1.1.4, 1.1.1.405 E Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate
GAMOKDAL_01539 2.6e-105 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the transfer of the cytidylyl group of CTP to D-ribitol 5-phosphate
GAMOKDAL_01540 1.5e-105 tagB 2.7.8.14, 2.7.8.44, 2.7.8.47 M glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
GAMOKDAL_01541 7.1e-88 tagA 2.4.1.187 GT26 M Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
GAMOKDAL_01542 9.5e-57 tagD 2.7.7.15, 2.7.7.39 IM Cytidylyltransferase
GAMOKDAL_01543 1.1e-135 tagF 2.7.8.12 M glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
GAMOKDAL_01544 5.3e-240 ggaA M Glycosyltransferase like family 2
GAMOKDAL_01545 0.0 ggaB GT2 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
GAMOKDAL_01546 1e-132 tagG GM Transport permease protein
GAMOKDAL_01547 4.9e-269 tagH 3.6.3.38, 3.6.3.40 GM Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
GAMOKDAL_01548 2e-163 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
GAMOKDAL_01549 8.3e-23 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
GAMOKDAL_01550 1.9e-100 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
GAMOKDAL_01551 2.1e-88 M Glycosyltransferase like family 2
GAMOKDAL_01552 2.1e-213 mnaA 5.1.3.14 M Belongs to the UDP-N-acetylglucosamine 2-epimerase family
GAMOKDAL_01553 1.6e-158 lytR K May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG)
GAMOKDAL_01554 1e-11
GAMOKDAL_01555 0.0 lytB 3.5.1.28 D Stage II sporulation protein
GAMOKDAL_01556 1.1e-206 lytC 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
GAMOKDAL_01557 4.3e-94 M Glycosyltransferase like family 2
GAMOKDAL_01558 4.6e-112 tuaA M COG2148 Sugar transferases involved in lipopolysaccharide synthesis
GAMOKDAL_01559 5.7e-248 wzxC S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
GAMOKDAL_01560 3.4e-219 tuaC 2.4.1.21, 3.2.1.1 GH13,GT4,GT5 GM Teichuronic acid
GAMOKDAL_01561 6.9e-259 tuaD 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
GAMOKDAL_01562 9.1e-262 tuaE M Teichuronic acid biosynthesis protein
GAMOKDAL_01563 3.9e-114 tuaF M protein involved in exopolysaccharide biosynthesis
GAMOKDAL_01564 4.7e-145 tuaG GT2 M Glycosyltransferase like family 2
GAMOKDAL_01565 1.4e-231 tuaH M Teichuronic acid biosynthesis glycosyltransferase tuaH
GAMOKDAL_01566 2.6e-181 tagO 2.7.8.33, 2.7.8.35 M COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase UDP-N-acetylglucosamine-1-phosphate transferase
GAMOKDAL_01567 6e-163 yvhJ K Transcriptional regulator
GAMOKDAL_01568 2e-120 yvyE 3.4.13.9 S Domain of unknown function (DUF1949)
GAMOKDAL_01569 5.1e-183 degS 2.7.13.3 T Member of the two-component regulatory system DegS DegU, which plays an important role in the transition growth phase
GAMOKDAL_01570 2e-126 degU KT COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
GAMOKDAL_01571 2.1e-154 degV S protein conserved in bacteria
GAMOKDAL_01572 1.1e-264 comFA L COG4098 Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
GAMOKDAL_01573 5.7e-46 comFB S Late competence development protein ComFB
GAMOKDAL_01574 1.2e-126 comFC S Phosphoribosyl transferase domain
GAMOKDAL_01575 7e-74 yvyF S flagellar protein
GAMOKDAL_01576 4.7e-39 flgM KNU Negative regulator of flagellin synthesis
GAMOKDAL_01577 4.1e-78 flgN NOU FlgN protein
GAMOKDAL_01578 1.2e-264 flgK N flagellar hook-associated protein
GAMOKDAL_01579 7.8e-155 flgL N Belongs to the bacterial flagellin family
GAMOKDAL_01580 2.2e-49 yviE
GAMOKDAL_01581 2.7e-73 fliW S Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
GAMOKDAL_01582 9.7e-30 csrA T Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
GAMOKDAL_01583 1.9e-156 fliC N Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
GAMOKDAL_01584 6.1e-57 flaG N flagellar protein FlaG
GAMOKDAL_01585 3.7e-266 fliD N morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
GAMOKDAL_01586 2.9e-69 fliS N flagellar protein FliS
GAMOKDAL_01587 1.9e-08 fliT S bacterial-type flagellum organization
GAMOKDAL_01588 1.8e-65
GAMOKDAL_01589 2.2e-102 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GAMOKDAL_01590 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GAMOKDAL_01591 6.1e-185 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
GAMOKDAL_01592 7.9e-141 yvjA S Uncharacterized protein conserved in bacteria (DUF2179)
GAMOKDAL_01593 1e-54 cccB C COG2010 Cytochrome c, mono- and diheme variants
GAMOKDAL_01594 1.6e-123 ftsE D cell division ATP-binding protein FtsE
GAMOKDAL_01595 1.6e-155 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
GAMOKDAL_01596 2e-269 ctpB 3.4.21.102 M Belongs to the peptidase S41A family
GAMOKDAL_01597 5.3e-56 swrA S Swarming motility protein
GAMOKDAL_01598 3.2e-220 minJ O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GAMOKDAL_01599 1.3e-225 yvkA EGP Major facilitator Superfamily
GAMOKDAL_01600 7e-101 yvkB K Transcriptional regulator
GAMOKDAL_01601 0.0 yvkC 2.7.9.2 GT Phosphotransferase
GAMOKDAL_01602 1.2e-30 csbA S protein conserved in bacteria
GAMOKDAL_01603 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
GAMOKDAL_01604 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
GAMOKDAL_01605 9.2e-78 fliC N Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
GAMOKDAL_01606 5.7e-33 yvkN
GAMOKDAL_01607 1.8e-48 yvlA
GAMOKDAL_01608 2.4e-166 yvlB S Putative adhesin
GAMOKDAL_01609 2.6e-26 pspB KT PspC domain
GAMOKDAL_01610 1.2e-50 yvlD S Membrane
GAMOKDAL_01611 2.7e-203 yvmA EGP Major facilitator Superfamily
GAMOKDAL_01612 2e-86 yvmB K helix_turn_helix multiple antibiotic resistance protein
GAMOKDAL_01613 3e-136 yvmC 2.3.2.22 S Involved in the biosynthesis of pulcherrimin, a red extracellular pigment. It uses activated amino acids in the form of aminoacyl-tRNAs (aa-tRNAs) as substrates to catalyze the ATP- independent formation of cyclodipeptides which are intermediates in diketopiperazine (DKP) biosynthetic pathways. Catalyzes the formation of cyclo(L-Leu-L-Leu) (cLL) from L-leucyl-tRNA(Leu). Can also incorporate various nonpolar residues, such as L- phenylalanine, L-leucine and methionine, into cyclodipeptides
GAMOKDAL_01614 1.2e-34 cypX 1.14.15.13 C Cytochrome P450
GAMOKDAL_01615 3.9e-173 cypX 1.14.15.13 C Cytochrome P450
GAMOKDAL_01616 1.8e-70 adcR K helix_turn_helix multiple antibiotic resistance protein
GAMOKDAL_01617 0.0 yvnB 3.1.4.53 Q Calcineurin-like phosphoesterase
GAMOKDAL_01618 8.9e-133 yvoA K transcriptional
GAMOKDAL_01619 3.2e-130 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GAMOKDAL_01620 3.5e-219 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
GAMOKDAL_01621 1.7e-168 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Also phosphorylates dephosphorylates the HPr-like catabolite repression protein crh on a specific serine residue. Therefore, by controlling the phosphorylation state of HPr and crh, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
GAMOKDAL_01622 1.6e-146 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GAMOKDAL_01623 1.6e-163 yvoD P COG0370 Fe2 transport system protein B
GAMOKDAL_01624 1.2e-117 ppaX 3.1.3.18, 3.6.1.1 S Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK P. Might play a role in controlling the intracellular pyrophosphate pool
GAMOKDAL_01625 1.6e-80 yvoF S COG0110 Acetyltransferase (isoleucine patch superfamily)
GAMOKDAL_01626 5.1e-119 hrpW 4.2.2.10, 4.2.2.2 G Pectate lyase
GAMOKDAL_01627 3.8e-139 yvpB NU protein conserved in bacteria
GAMOKDAL_01628 5e-218 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
GAMOKDAL_01629 7.4e-115 hisG 2.4.2.17 E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
GAMOKDAL_01630 3.8e-227 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
GAMOKDAL_01631 2.1e-108 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
GAMOKDAL_01632 5.8e-112 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
GAMOKDAL_01633 3e-128 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
GAMOKDAL_01634 4e-136 hisF E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
GAMOKDAL_01635 8.3e-111 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E belongs to the PRA-CH family
GAMOKDAL_01636 9.9e-76
GAMOKDAL_01637 0.0
GAMOKDAL_01639 0.0 msbA2 3.6.3.44 V ABC transporter
GAMOKDAL_01640 6.5e-276 S COG0457 FOG TPR repeat
GAMOKDAL_01641 2.5e-91 usp CBM50 M protein conserved in bacteria
GAMOKDAL_01642 2.5e-175 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
GAMOKDAL_01643 2.6e-88 yvcI 3.6.1.55 F COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
GAMOKDAL_01644 1.7e-165 rapZ S Displays ATPase and GTPase activities
GAMOKDAL_01645 7.3e-178 ybhK S Required for morphogenesis under gluconeogenic growth conditions
GAMOKDAL_01646 4.1e-170 whiA K May be required for sporulation
GAMOKDAL_01647 1.6e-36 crh G Phosphocarrier protein Chr
GAMOKDAL_01648 1.6e-140 nhoA 2.3.1.118 Q Belongs to the arylamine N-acetyltransferase family
GAMOKDAL_01649 3.6e-18
GAMOKDAL_01650 5.1e-22
GAMOKDAL_01651 1.9e-132 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
GAMOKDAL_01652 7.5e-197 yvcQ 2.7.13.3 T His Kinase A (phosphoacceptor) domain
GAMOKDAL_01653 5.6e-141 yvcR V ABC transporter, ATP-binding protein
GAMOKDAL_01654 0.0 yxdM V ABC transporter (permease)
GAMOKDAL_01655 4.3e-183 ghrB 1.1.1.215, 1.1.1.26, 1.1.1.43, 1.1.1.79, 1.1.1.81 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GAMOKDAL_01656 4.8e-105 ytiB 4.2.1.1 P Reversible hydration of carbon dioxide
GAMOKDAL_01657 2.6e-286 sulP P COG0659 Sulfate permease and related transporters (MFS superfamily)
GAMOKDAL_01658 3.4e-52 yvdC S MazG nucleotide pyrophosphohydrolase domain
GAMOKDAL_01659 3.3e-106 yvdD 3.2.2.10 S Belongs to the LOG family
GAMOKDAL_01660 8.8e-173 yvdE K Transcriptional regulator
GAMOKDAL_01661 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Alpha amylase, N-terminal ig-like domain
GAMOKDAL_01662 1.4e-234 mdxE G COG2182 Maltose-binding periplasmic proteins domains
GAMOKDAL_01663 2.2e-243 malC P COG1175 ABC-type sugar transport systems, permease components
GAMOKDAL_01664 9.5e-147 malD P transport
GAMOKDAL_01665 8.3e-157 malA S Protein of unknown function (DUF1189)
GAMOKDAL_01666 0.0 yvdK 2.4.1.8 GH65 G Glycoside hydrolase, family 65
GAMOKDAL_01667 0.0 malL 3.2.1.10 GH13 G COG0366 Glycosidases
GAMOKDAL_01668 9.1e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S Haloacid dehalogenase-like hydrolase
GAMOKDAL_01669 1.2e-103 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GAMOKDAL_01671 4.8e-93 yvdQ S Protein of unknown function (DUF3231)
GAMOKDAL_01672 4.1e-50 sugE P Small Multidrug Resistance protein
GAMOKDAL_01673 5.7e-50 ykkC P Small Multidrug Resistance protein
GAMOKDAL_01674 2.6e-106 yvdT K Transcriptional regulator
GAMOKDAL_01675 1.8e-295 yveA E amino acid
GAMOKDAL_01676 0.0 levB 3.2.1.26, 3.2.1.64, 3.2.1.65, 3.2.1.80 GH32 G Belongs to the glycosyl hydrolase 32 family
GAMOKDAL_01677 3.5e-274 sacB 2.4.1.10 GH68 M levansucrase activity
GAMOKDAL_01678 8.4e-262 pbpE V Beta-lactamase
GAMOKDAL_01679 5.8e-126 racX 5.1.1.13 M Belongs to the aspartate glutamate racemases family
GAMOKDAL_01680 9.3e-72 MA20_18690 S Protein of unknown function (DUF3237)
GAMOKDAL_01681 4.6e-93 padC Q Phenolic acid decarboxylase
GAMOKDAL_01683 2.4e-286 pnbA CE10 I Belongs to the type-B carboxylesterase lipase family
GAMOKDAL_01684 2.8e-76 slr K transcriptional
GAMOKDAL_01685 1.3e-117 ywqC M biosynthesis protein
GAMOKDAL_01686 1e-114 epsB 2.7.10.2 D COG0489 ATPases involved in chromosome partitioning
GAMOKDAL_01687 0.0 pglF 4.2.1.115, 4.2.1.135, 4.2.1.46 GM Polysaccharide biosynthesis protein
GAMOKDAL_01688 1.2e-219 epsD GT4 M Glycosyl transferase 4-like
GAMOKDAL_01689 1.2e-157 epsE GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
GAMOKDAL_01690 6.4e-218 epsF GT4 M Glycosyl transferases group 1
GAMOKDAL_01691 4.8e-207 epsG S EpsG family
GAMOKDAL_01692 8.9e-195 epsH GT2 S Glycosyltransferase like family 2
GAMOKDAL_01693 1.6e-202 epsI GM pyruvyl transferase
GAMOKDAL_01694 1.2e-194 epsJ GT2 S COG0463 Glycosyltransferases involved in cell wall biogenesis
GAMOKDAL_01695 1.2e-256 pglK S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
GAMOKDAL_01696 5.4e-107 epsL M COG2148 Sugar transferases involved in lipopolysaccharide synthesis
GAMOKDAL_01697 1.7e-55 epsM GM COG0110 Acetyltransferase (isoleucine patch superfamily)
GAMOKDAL_01698 2.2e-218 epsN 2.6.1.102 E Belongs to the DegT DnrJ EryC1 family
GAMOKDAL_01699 3.5e-185 yvfF GM Exopolysaccharide biosynthesis protein
GAMOKDAL_01700 1e-31 yvfG S YvfG protein
GAMOKDAL_01701 9.7e-239 rpoN K COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog
GAMOKDAL_01702 4.8e-307 yvfH C L-lactate permease
GAMOKDAL_01703 1e-112 yvfI K COG2186 Transcriptional regulators
GAMOKDAL_01704 1.4e-184 lacR K Transcriptional regulator
GAMOKDAL_01705 2.3e-229 cycB G COG2182 Maltose-binding periplasmic proteins domains
GAMOKDAL_01706 1.3e-232 malC P COG1175 ABC-type sugar transport systems, permease components
GAMOKDAL_01707 7.2e-150 ganQ P transport
GAMOKDAL_01708 0.0 lacA 3.2.1.23 G beta-galactosidase
GAMOKDAL_01709 9.8e-252 galA 3.2.1.89 G arabinogalactan
GAMOKDAL_01710 2.4e-199 rsbU 3.1.3.3 T response regulator
GAMOKDAL_01711 4.4e-157 rsbQ S Alpha/beta hydrolase family
GAMOKDAL_01712 2.4e-159 yvfR V COG1131 ABC-type multidrug transport system, ATPase component
GAMOKDAL_01713 4e-133 yvfS V COG0842 ABC-type multidrug transport system, permease component
GAMOKDAL_01714 1.1e-193 desK 2.7.13.3 T Histidine kinase
GAMOKDAL_01715 3.8e-105 desR T COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
GAMOKDAL_01716 6.5e-136 lutA C Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
GAMOKDAL_01717 4.6e-274 lutB C Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate
GAMOKDAL_01718 7.5e-132 lutC S Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
GAMOKDAL_01719 1.1e-192 yvbX S Glycosyl hydrolase
GAMOKDAL_01720 2.8e-241 yvbW E COG1113 Gamma-aminobutyrate permease and related permeases
GAMOKDAL_01721 7.2e-156 yvbV EG EamA-like transporter family
GAMOKDAL_01722 5.1e-159 yvbU K Transcriptional regulator
GAMOKDAL_01723 1.5e-191 yvbT C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GAMOKDAL_01724 5.5e-203 araR K transcriptional
GAMOKDAL_01725 1.6e-252 araE EGP Major facilitator Superfamily
GAMOKDAL_01726 9.1e-184 cggR K COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
GAMOKDAL_01727 6.2e-185 gapA 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
GAMOKDAL_01728 1e-218 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
GAMOKDAL_01729 4.3e-138 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GAMOKDAL_01730 1.3e-298 gpmI 5.4.2.12 G Catalyzes the interconversion of 2-phosphoglycerate and
GAMOKDAL_01731 1.9e-242 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GAMOKDAL_01732 8.3e-76 yvbK 3.1.3.25 K acetyltransferase
GAMOKDAL_01733 6.8e-251 tcaA S response to antibiotic
GAMOKDAL_01734 1.2e-121 exoY M Membrane
GAMOKDAL_01735 1.9e-112 yvbH S YvbH-like oligomerisation region
GAMOKDAL_01736 2.8e-90 yvbG U UPF0056 membrane protein
GAMOKDAL_01737 3.5e-97 yvbF K Belongs to the GbsR family
GAMOKDAL_01738 8.8e-212 opuCA 3.6.3.32 E COG1125 ABC-type proline glycine betaine transport systems, ATPase components
GAMOKDAL_01739 4.5e-112 opuCB P COG1174 ABC-type proline glycine betaine transport systems, permease component
GAMOKDAL_01740 6.1e-171 opuCC M COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
GAMOKDAL_01741 1.9e-105 opuCD P COG1174 ABC-type proline glycine betaine transport systems, permease component
GAMOKDAL_01742 2.1e-62 yvbF K Belongs to the GbsR family
GAMOKDAL_01743 1.2e-211 opuCA 3.6.3.32 E COG1125 ABC-type proline glycine betaine transport systems, ATPase components
GAMOKDAL_01744 3.6e-109 opuCB P COG1174 ABC-type proline glycine betaine transport systems, permease component
GAMOKDAL_01745 8e-171 opuCC M COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
GAMOKDAL_01746 4.7e-104 opuCD P COG1174 ABC-type proline glycine betaine transport systems, permease component
GAMOKDAL_01747 1.3e-196 spaB S Lantibiotic dehydratase, C terminus
GAMOKDAL_01748 1.3e-156 spaT V ABC transporter
GAMOKDAL_01749 9.3e-96 spaC2 V PFAM Lanthionine synthetase
GAMOKDAL_01750 1.1e-09 S Lanthionine-containing peptide antibiotic (lantibiotic) active on Gram-positive bacteria. The bactericidal activity of lantibiotics is based on depolarization of energized bacterial cytoplasmic membranes, initiated by the formation of aqueous transmembrane pores
GAMOKDAL_01752 4.2e-103 mutF V ABC transporter, ATP-binding protein
GAMOKDAL_01753 1.5e-87 spaE S ABC-2 family transporter protein
GAMOKDAL_01754 1.7e-81 mutG S ABC-2 family transporter protein
GAMOKDAL_01755 2.5e-105 K Transcriptional regulatory protein, C terminal
GAMOKDAL_01756 1.1e-152 T His Kinase A (phosphoacceptor) domain
GAMOKDAL_01757 3.2e-218 NT chemotaxis protein
GAMOKDAL_01758 2.2e-54 yodB K transcriptional
GAMOKDAL_01759 5.2e-69 yvaO K Cro/C1-type HTH DNA-binding domain
GAMOKDAL_01760 1.2e-68 K transcriptional
GAMOKDAL_01761 9.8e-36 yvzC K Transcriptional
GAMOKDAL_01762 7.7e-151 yvaM S Serine aminopeptidase, S33
GAMOKDAL_01763 2.4e-23 secG U Preprotein translocase subunit SecG
GAMOKDAL_01764 5.6e-143 est 3.1.1.1 S Carboxylesterase
GAMOKDAL_01765 0.0 rnr K 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
GAMOKDAL_01766 1.6e-82 smpB O Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
GAMOKDAL_01769 1.8e-15
GAMOKDAL_01770 9.1e-131 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
GAMOKDAL_01771 3.3e-98 K Bacterial regulatory proteins, tetR family
GAMOKDAL_01772 3.4e-53 yvaE P Small Multidrug Resistance protein
GAMOKDAL_01773 2.8e-72 yvaD S Family of unknown function (DUF5360)
GAMOKDAL_01774 0.0 yvaC S Fusaric acid resistance protein-like
GAMOKDAL_01775 7e-118 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
GAMOKDAL_01776 6.9e-195 yvaA 1.1.1.371 S Oxidoreductase
GAMOKDAL_01777 2.2e-48 csoR S transcriptional
GAMOKDAL_01778 5.9e-29 copZ P Copper resistance protein CopZ
GAMOKDAL_01779 0.0 copA 3.6.3.54 P P-type ATPase
GAMOKDAL_01780 0.0 cadA 3.6.3.3, 3.6.3.5 P COG2217 Cation transport ATPase
GAMOKDAL_01781 1.6e-104 bdbD O Thioredoxin
GAMOKDAL_01782 2.2e-72 bdbC O Required for disulfide bond formation in some proteins
GAMOKDAL_01783 1.6e-106 yvgT S membrane
GAMOKDAL_01785 0.0 helD 3.6.4.12 L DNA helicase
GAMOKDAL_01786 0.0 cysJ 1.8.1.2 P Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
GAMOKDAL_01787 0.0 cysI 1.7.7.1, 1.8.1.2, 1.8.7.1 P Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate
GAMOKDAL_01788 0.0 yjcE P COG0025 NhaP-type Na H and K H antiporters
GAMOKDAL_01789 5.4e-86 yvgO
GAMOKDAL_01790 2.5e-155 yvgN S reductase
GAMOKDAL_01791 1.4e-119 modB P COG4149 ABC-type molybdate transport system, permease component
GAMOKDAL_01792 4.6e-135 modA P COG0725 ABC-type molybdate transport system, periplasmic component
GAMOKDAL_01793 2.7e-166 yvgK P COG1910 Periplasmic molybdate-binding protein domain
GAMOKDAL_01794 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
GAMOKDAL_01795 1e-84 yvsG S LexA-binding, inner membrane-associated putative hydrolase
GAMOKDAL_01796 6.5e-16 S Small spore protein J (Spore_SspJ)
GAMOKDAL_01797 4.9e-236 yvsH E Arginine ornithine antiporter
GAMOKDAL_01799 2e-177 fhuD P ABC transporter
GAMOKDAL_01800 4.6e-183 fhuB P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GAMOKDAL_01801 5.3e-176 fhuG P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GAMOKDAL_01802 4.4e-149 fhuC 3.6.3.34 HP ABC transporter
GAMOKDAL_01803 1.4e-175 M Efflux transporter rnd family, mfp subunit
GAMOKDAL_01804 2.3e-122 macB V ABC transporter, ATP-binding protein
GAMOKDAL_01805 1.8e-210 yvrN V COG0577 ABC-type antimicrobial peptide transport system, permease component
GAMOKDAL_01806 1.3e-64 yvrL S Regulatory protein YrvL
GAMOKDAL_01807 8.1e-229 oxdC 4.1.1.2 G Oxalate decarboxylase
GAMOKDAL_01808 6.9e-19 S YvrJ protein family
GAMOKDAL_01809 2.1e-97 yvrI K RNA polymerase
GAMOKDAL_01810 7.2e-23
GAMOKDAL_01811 2.8e-131 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
GAMOKDAL_01812 0.0 T PhoQ Sensor
GAMOKDAL_01813 3.8e-170 yvrE G SMP-30/Gluconolaconase/LRE-like region
GAMOKDAL_01814 1.4e-139 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
GAMOKDAL_01815 2.2e-168 yvrC P COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
GAMOKDAL_01816 1.9e-184 btuC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GAMOKDAL_01817 3.6e-241 yvrA 3.6.3.34 HP COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
GAMOKDAL_01818 1.3e-99 yvqK 2.5.1.17 S Adenosyltransferase
GAMOKDAL_01819 7e-226 yvqJ EGP Major facilitator Superfamily
GAMOKDAL_01820 7.3e-62 liaI S membrane
GAMOKDAL_01821 9.5e-105 liaH KT COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription
GAMOKDAL_01822 1.1e-118 liaG S Putative adhesin
GAMOKDAL_01823 1.2e-126 yvqF S Cell wall-active antibiotics response 4TMS YvqF
GAMOKDAL_01824 1.6e-186 vraS 2.7.13.3 T Histidine kinase
GAMOKDAL_01825 3e-108 vraR KT COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
GAMOKDAL_01826 1.1e-182 gerAC S Spore germination B3/ GerAC like, C-terminal
GAMOKDAL_01827 1.3e-196 gerAB E Spore germination protein
GAMOKDAL_01828 1.4e-246 gerAA EG Spore germination protein
GAMOKDAL_01829 2.3e-24 S Protein of unknown function (DUF3970)
GAMOKDAL_01830 2.5e-261 fumC 1.1.1.38, 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
GAMOKDAL_01831 4.3e-158 yuxN K Transcriptional regulator
GAMOKDAL_01832 4.3e-250 cssS 2.7.13.3 T PhoQ Sensor
GAMOKDAL_01833 3.4e-126 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
GAMOKDAL_01834 7.6e-234 htrA 3.4.21.107 O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GAMOKDAL_01835 1.2e-79 dps P Ferritin-like domain
GAMOKDAL_01836 1.9e-150 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
GAMOKDAL_01837 1.8e-299 pepF2 E COG1164 Oligoendopeptidase F
GAMOKDAL_01838 2.5e-66 S YusW-like protein
GAMOKDAL_01839 1e-153 yusV 3.6.3.34 HP ABC transporter
GAMOKDAL_01840 1.1e-46 yusU S Protein of unknown function (DUF2573)
GAMOKDAL_01841 2.2e-157 yusT K LysR substrate binding domain
GAMOKDAL_01842 3.2e-106 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
GAMOKDAL_01843 2.7e-64 yusQ S Tautomerase enzyme
GAMOKDAL_01844 1e-290 yusP P Major facilitator superfamily
GAMOKDAL_01845 4.6e-74 yusO K Iron dependent repressor, N-terminal DNA binding domain
GAMOKDAL_01846 5.4e-53 yusN M Coat F domain
GAMOKDAL_01847 5.1e-40
GAMOKDAL_01848 1.2e-163 fadM E Proline dehydrogenase
GAMOKDAL_01849 8.1e-09 S YuzL-like protein
GAMOKDAL_01850 0.0 fadB 1.1.1.35, 4.2.1.17, 5.1.2.3 I 3-hydroxyacyl-CoA dehydrogenase
GAMOKDAL_01851 1.4e-217 fadA 2.3.1.16 I Belongs to the thiolase family
GAMOKDAL_01852 0.0 fadE 1.3.8.1 I acyl-CoA dehydrogenase
GAMOKDAL_01853 2.8e-63 arsC 1.20.4.1 P Belongs to the ArsC family
GAMOKDAL_01854 9.3e-65 gcvH E Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate
GAMOKDAL_01855 1.1e-39 yusG S Protein of unknown function (DUF2553)
GAMOKDAL_01856 1.6e-73 rnmV 3.1.26.8 L COG1658 Small primase-like proteins (Toprim domain)
GAMOKDAL_01857 5.6e-55 traF CO Thioredoxin
GAMOKDAL_01858 2.4e-56 yusD S SCP-2 sterol transfer family
GAMOKDAL_01859 4.8e-185 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GAMOKDAL_01860 1.4e-95 metI P COG2011 ABC-type metal ion transport system, permease component
GAMOKDAL_01861 7.2e-147 metQ P Belongs to the NlpA lipoprotein family
GAMOKDAL_01862 2.4e-62 yurZ 2.3.1.12, 4.1.1.44 S Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
GAMOKDAL_01863 2.3e-142 sufC O COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component
GAMOKDAL_01864 1.4e-245 sufD O assembly protein SufD
GAMOKDAL_01865 6.1e-235 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GAMOKDAL_01866 1.4e-77 nifU C COG0822 NifU homolog involved in Fe-S cluster formation
GAMOKDAL_01867 7.9e-271 sufB O FeS cluster assembly
GAMOKDAL_01868 2.9e-66 yurT E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GAMOKDAL_01869 1.8e-41
GAMOKDAL_01871 3.4e-208 yurR 1.4.5.1 E COG0665 Glycine D-amino acid oxidases (deaminating)
GAMOKDAL_01872 2.8e-66 yurQ 2.7.7.7 L COG0322 Nuclease subunit of the excinuclease complex
GAMOKDAL_01873 2.6e-183 frlB M Catalyzes the conversion of a range of fructosamine 6- phosphates to glucose 6-phosphate and a free amino acid
GAMOKDAL_01874 1.5e-239 yurO G COG1653 ABC-type sugar transport system, periplasmic component
GAMOKDAL_01875 5.3e-156 yurN G Binding-protein-dependent transport system inner membrane component
GAMOKDAL_01876 7.3e-169 yurM P COG0395 ABC-type sugar transport system, permease component
GAMOKDAL_01877 1.5e-163 yurL 2.7.1.218 G pfkB family carbohydrate kinase
GAMOKDAL_01878 3.3e-135 yurK K UTRA
GAMOKDAL_01879 5.9e-205 msmX P Belongs to the ABC transporter superfamily
GAMOKDAL_01880 7e-169 bsn L Ribonuclease
GAMOKDAL_01881 6.4e-232 pucF 3.5.1.6, 3.5.1.87, 3.5.3.9 E COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases
GAMOKDAL_01882 1.9e-239 pucG 2.6.1.112, 2.6.1.44, 2.6.1.45, 2.6.1.51 E COG0075 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase
GAMOKDAL_01883 6.3e-182 pucA 1.17.1.4 O COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
GAMOKDAL_01884 5.3e-110 pucB 1.1.1.328, 1.17.1.4, 2.7.7.76 S MobA-like NTP transferase domain
GAMOKDAL_01885 2.9e-148 ygfM 1.17.1.4, 1.2.5.3 C COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM homologs
GAMOKDAL_01886 0.0 xdhA 1.17.1.4 C COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs
GAMOKDAL_01887 1.5e-94 1.17.1.4, 1.2.5.3, 1.3.99.16 C COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs
GAMOKDAL_01889 1.7e-54 uraH 3.5.2.17, 4.1.1.97 S Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily
GAMOKDAL_01890 4.9e-279 uraD 1.7.3.3, 3.5.1.41, 4.1.1.97 Q Catalyzes the oxidation of uric acid to 5- hydroxyisourate, which is further processed to form (S)-allantoin
GAMOKDAL_01891 2.1e-222 pbuX F xanthine
GAMOKDAL_01892 5.3e-232 pbuX F Permease family
GAMOKDAL_01893 8.3e-301 pucR QT COG2508 Regulator of polyketide synthase expression
GAMOKDAL_01894 8.6e-259 allB 3.5.2.5 F Catalyzes the conversion of allantoin (5- ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring
GAMOKDAL_01895 8.2e-60 yunG
GAMOKDAL_01896 4.3e-171 yunF S Protein of unknown function DUF72
GAMOKDAL_01897 2e-141 yunE S membrane transporter protein
GAMOKDAL_01898 4.1e-264 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
GAMOKDAL_01899 1.1e-47 yunC S Domain of unknown function (DUF1805)
GAMOKDAL_01900 1e-131 yunB S Sporulation protein YunB (Spo_YunB)
GAMOKDAL_01901 4.5e-196 lytH M Peptidase, M23
GAMOKDAL_01902 1e-167 lipA 2.8.1.8 H Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
GAMOKDAL_01903 8.3e-111 yutC S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
GAMOKDAL_01904 9.7e-48 yutD S protein conserved in bacteria
GAMOKDAL_01905 1e-75 yutE S Protein of unknown function DUF86
GAMOKDAL_01906 4.2e-141 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
GAMOKDAL_01907 2.5e-77 pgpA 3.1.3.27 I COG1267 Phosphatidylglycerophosphatase A and related proteins
GAMOKDAL_01908 6.5e-198 yutH S Spore coat protein
GAMOKDAL_01909 7.9e-241 hom 1.1.1.3 E homoserine dehydrogenase
GAMOKDAL_01910 2e-197 thrC 4.2.3.1 E Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
GAMOKDAL_01911 8.6e-173 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
GAMOKDAL_01912 0.0 yuxL 3.4.14.5, 3.4.19.1 EU peptidase
GAMOKDAL_01913 1.2e-35 yutI O COG0694 Thioredoxin-like proteins and domains
GAMOKDAL_01914 3e-56 yuzD S protein conserved in bacteria
GAMOKDAL_01915 2e-199 yutJ 1.6.99.3 C NADH dehydrogenase
GAMOKDAL_01916 3.2e-39 yuzB S Belongs to the UPF0349 family
GAMOKDAL_01917 5.3e-199 yutK F Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
GAMOKDAL_01918 2.2e-162 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
GAMOKDAL_01919 3.7e-63 erpA S Belongs to the HesB IscA family
GAMOKDAL_01920 4.7e-72 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
GAMOKDAL_01921 3.8e-116 paiB K Putative FMN-binding domain
GAMOKDAL_01922 5.1e-184 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GAMOKDAL_01924 3.5e-188 yumC 1.18.1.2, 1.19.1.1 C reductase
GAMOKDAL_01925 5.5e-236 yumB 1.6.99.3 C NADH dehydrogenase
GAMOKDAL_01926 8.4e-27 yuiB S Putative membrane protein
GAMOKDAL_01927 1.4e-116 yuiC S protein conserved in bacteria
GAMOKDAL_01928 1.2e-77 yuiD S protein conserved in bacteria
GAMOKDAL_01929 1.3e-279 pepA 3.4.11.1, 3.4.11.5 E Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
GAMOKDAL_01930 3.9e-211 yuiF S antiporter
GAMOKDAL_01931 1.1e-93 bioY S Biotin biosynthesis protein
GAMOKDAL_01932 5.8e-122 yuiH S Oxidoreductase molybdopterin binding domain
GAMOKDAL_01933 8e-165 besA S Putative esterase
GAMOKDAL_01934 1.2e-140 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
GAMOKDAL_01935 4.3e-225 entC 5.4.4.2 HQ Isochorismate synthase
GAMOKDAL_01936 2.2e-311 entE 2.7.7.58, 6.3.2.14 Q 2,3-dihydroxybenzoate-AMP ligase
GAMOKDAL_01937 2.2e-176 entB 3.3.2.1, 6.3.2.14 Q Isochorismatase family
GAMOKDAL_01938 0.0 dhbF Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GAMOKDAL_01939 1.4e-35 mbtH S MbtH-like protein
GAMOKDAL_01940 4.1e-132 yukJ S Uncharacterized conserved protein (DUF2278)
GAMOKDAL_01941 1.4e-204 ald 1.4.1.1 E Belongs to the AlaDH PNT family
GAMOKDAL_01942 1.5e-228 yukF QT Transcriptional regulator
GAMOKDAL_01943 2.8e-45 esxA S Belongs to the WXG100 family
GAMOKDAL_01944 7.7e-41 yukD S WXG100 protein secretion system (Wss), protein YukD
GAMOKDAL_01945 2.3e-211 essB S WXG100 protein secretion system (Wss), protein YukC
GAMOKDAL_01946 0.0 essC D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
GAMOKDAL_01947 0.0 esaA S type VII secretion protein EsaA
GAMOKDAL_01948 5.6e-64 yueC S Family of unknown function (DUF5383)
GAMOKDAL_01949 2.2e-131 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
GAMOKDAL_01950 4.8e-96 yueE S phosphohydrolase
GAMOKDAL_01951 2.9e-24 S Protein of unknown function (DUF2642)
GAMOKDAL_01952 2.8e-69 S Protein of unknown function (DUF2283)
GAMOKDAL_01953 3.2e-190 yueF S transporter activity
GAMOKDAL_01954 1.7e-31 yueG S Spore germination protein gerPA/gerPF
GAMOKDAL_01955 4.8e-38 yueH S YueH-like protein
GAMOKDAL_01956 5.1e-66 yueI S Protein of unknown function (DUF1694)
GAMOKDAL_01957 1.2e-102 pncA Q COG1335 Amidases related to nicotinamidase
GAMOKDAL_01958 3.6e-266 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GAMOKDAL_01959 2.2e-232 yuxH 3.1.4.52 T signal transduction protein containing EAL and modified HD-GYP domains
GAMOKDAL_01960 8.5e-23 yuzC
GAMOKDAL_01962 2.2e-128 comQ H Belongs to the FPP GGPP synthase family
GAMOKDAL_01964 3.8e-254 comP 2.7.13.3 T Histidine kinase
GAMOKDAL_01965 5.1e-116 comA K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
GAMOKDAL_01966 2.3e-63 ydiI Q protein, possibly involved in aromatic compounds catabolism
GAMOKDAL_01967 6.7e-60 phaG P COG1320 Multisubunit Na H antiporter, MnhG subunit
GAMOKDAL_01968 7.2e-38 phaF P Subunit F of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
GAMOKDAL_01969 1.1e-78 mrpE P Subunit E of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
GAMOKDAL_01970 4.2e-262 mrpD CP Subunit D of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
GAMOKDAL_01971 1.5e-50 phaC 1.6.5.3 P Subunit C of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
GAMOKDAL_01972 5.4e-69 mrpB P Subunit B of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
GAMOKDAL_01973 0.0 phaA 1.6.5.3 CP COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit
GAMOKDAL_01974 5e-15
GAMOKDAL_01975 8.2e-233 maeN C COG3493 Na citrate symporter
GAMOKDAL_01976 2.9e-168 yufQ S Belongs to the binding-protein-dependent transport system permease family
GAMOKDAL_01977 2.1e-183 yufP S Belongs to the binding-protein-dependent transport system permease family
GAMOKDAL_01978 1.9e-273 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
GAMOKDAL_01979 4.2e-192 tcsA S ABC-type transport system, periplasmic component surface lipoprotein
GAMOKDAL_01980 3.9e-125 dcuR T COG4565 Response regulator of citrate malate metabolism
GAMOKDAL_01981 9.9e-294 dcuS 2.7.13.3 T Signal transduction histidine kinase regulating citrate malate metabolism
GAMOKDAL_01982 6.3e-78 yufK S Family of unknown function (DUF5366)
GAMOKDAL_01983 9.1e-74 yuxK S protein conserved in bacteria
GAMOKDAL_01984 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Penicillin-binding Protein
GAMOKDAL_01985 4.2e-184 yuxJ EGP Major facilitator Superfamily
GAMOKDAL_01987 4.2e-115 kapD L the KinA pathway to sporulation
GAMOKDAL_01988 7.4e-70 kapB G Kinase associated protein B
GAMOKDAL_01989 1.3e-232 T PhoQ Sensor
GAMOKDAL_01990 7.6e-227 patB 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
GAMOKDAL_01991 1.1e-40 yugE S Domain of unknown function (DUF1871)
GAMOKDAL_01992 4.2e-155 yugF I Hydrolase
GAMOKDAL_01993 1.6e-85 alaR K Transcriptional regulator
GAMOKDAL_01994 2.1e-199 yugH 2.6.1.1 E Aminotransferase
GAMOKDAL_01995 8.9e-63 yugI 5.3.1.9 J RNA binding protein (contains ribosomal protein S1 domain)
GAMOKDAL_01996 1.1e-34 yuzA S Domain of unknown function (DUF378)
GAMOKDAL_01997 8.9e-228 yugJ C oxidoreductases, Fe-dependent alcohol dehydrogenase family
GAMOKDAL_01998 1.1e-228 yugK C Dehydrogenase
GAMOKDAL_01999 4.2e-261 pgi 5.3.1.9 G Belongs to the GPI family
GAMOKDAL_02001 6.3e-72 yugN S YugN-like family
GAMOKDAL_02002 2.2e-182 yugO P COG1226 Kef-type K transport systems
GAMOKDAL_02003 5.4e-53 mstX S Membrane-integrating protein Mistic
GAMOKDAL_02004 2.3e-38
GAMOKDAL_02005 1.4e-116 yugP S Zn-dependent protease
GAMOKDAL_02006 1.3e-235 yugS S COG1253 Hemolysins and related proteins containing CBS domains
GAMOKDAL_02007 0.0 yugT 3.2.1.10, 3.2.1.20 GH13,GH31 G COG0366 Glycosidases
GAMOKDAL_02008 2.1e-72 yugU S Uncharacterised protein family UPF0047
GAMOKDAL_02009 2.3e-35
GAMOKDAL_02010 2.6e-140 tgl 2.3.2.13 S protein-glutamine gamma-glutamyltransferase activity
GAMOKDAL_02011 3.2e-225 mcpA NT chemotaxis protein
GAMOKDAL_02012 1.5e-222 mcpA NT chemotaxis protein
GAMOKDAL_02013 1.6e-293 mcpA NT chemotaxis protein
GAMOKDAL_02014 5.1e-239 mcpA NT chemotaxis protein
GAMOKDAL_02015 0.0 rhaD 1.1.1.1, 4.1.2.19 IQ Class II Aldolase and Adducin N-terminal domain
GAMOKDAL_02016 1e-134 fucR K COG1349 Transcriptional regulators of sugar metabolism
GAMOKDAL_02017 3.3e-280 rhaB 2.7.1.12, 2.7.1.17, 2.7.1.5, 5.3.1.14 G Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate
GAMOKDAL_02018 7.2e-55 rhaM 5.1.3.32 G Involved in the anomeric conversion of L-rhamnose
GAMOKDAL_02019 1.1e-252 rhaA 2.7.1.5, 5.3.1.14 G Belongs to the rhamnose isomerase family
GAMOKDAL_02020 9.7e-183 ygjR S Oxidoreductase
GAMOKDAL_02021 9.1e-196 yubA S transporter activity
GAMOKDAL_02022 2.7e-133 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
GAMOKDAL_02024 1.3e-84 cdoA 1.13.11.20 S Cysteine dioxygenase type I
GAMOKDAL_02025 1e-271 yubD P Major Facilitator Superfamily
GAMOKDAL_02026 5.4e-152 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
GAMOKDAL_02027 1e-38 yiaA S yiaA/B two helix domain
GAMOKDAL_02028 2.7e-236 ktrB P Potassium
GAMOKDAL_02029 1.9e-121 ktrA P COG0569 K transport systems, NAD-binding component
GAMOKDAL_02030 2.2e-91 yuaB
GAMOKDAL_02031 5.5e-95 yuaC K Belongs to the GbsR family
GAMOKDAL_02032 1.8e-281 gbsA 1.2.1.8 C Belongs to the aldehyde dehydrogenase family
GAMOKDAL_02033 2.9e-229 gbsB 1.1.1.1 C alcohol dehydrogenase
GAMOKDAL_02034 3.9e-107 yuaD
GAMOKDAL_02035 3.9e-84 yuaE S DinB superfamily
GAMOKDAL_02036 2.7e-76 yuaF OU Membrane protein implicated in regulation of membrane protease activity
GAMOKDAL_02037 2e-187 yuaG 3.4.21.72 S protein conserved in bacteria
GAMOKDAL_02038 5.5e-92 M1-753 M FR47-like protein
GAMOKDAL_02039 4.3e-90 thiT S Thiamine transporter protein (Thia_YuaJ)
GAMOKDAL_02040 7.9e-250 ybaR P COG0659 Sulfate permease and related transporters (MFS superfamily)
GAMOKDAL_02042 1.7e-160 ybaS 1.1.1.58 S Na -dependent transporter
GAMOKDAL_02043 1.2e-137 ybbA S Putative esterase
GAMOKDAL_02044 3e-179 feuC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GAMOKDAL_02045 3.1e-176 feuB P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GAMOKDAL_02046 4e-165 feuA P Iron-uptake system-binding protein
GAMOKDAL_02047 2.8e-304 ybbB K COG2207 AraC-type DNA-binding domain-containing proteins
GAMOKDAL_02048 6e-238 ybbC 3.2.1.52 S protein conserved in bacteria
GAMOKDAL_02049 0.0 ybbD 3.2.1.52 G Belongs to the glycosyl hydrolase 3 family
GAMOKDAL_02050 9.2e-253 yfeW 3.4.16.4 V Belongs to the UPF0214 family
GAMOKDAL_02051 6.4e-233 ybbF 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
GAMOKDAL_02052 2.5e-150 ybbH K transcriptional
GAMOKDAL_02053 4.6e-163 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
GAMOKDAL_02054 3.5e-85 ybbJ J acetyltransferase
GAMOKDAL_02055 1.5e-77 ybbK 2.4.2.1, 6.3.2.4 S Protein of unknown function (DUF523)
GAMOKDAL_02058 2.5e-98 sigW K Belongs to the sigma-70 factor family. ECF subfamily
GAMOKDAL_02059 1.8e-102 rsiW K Is the anti-sigma factor for SigW. The presence of RsiW leads to the inactivation of SigW, and its proteolytic destruction to sigma-W activation
GAMOKDAL_02060 2.7e-146 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
GAMOKDAL_02061 2.6e-224 ybbR S protein conserved in bacteria
GAMOKDAL_02062 3.5e-252 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GAMOKDAL_02063 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
GAMOKDAL_02064 9.3e-172 alkA 3.2.2.21 L COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
GAMOKDAL_02065 1.6e-114 adaA 3.2.2.21 K Transcriptional regulator
GAMOKDAL_02066 9e-98 ogt 2.1.1.63, 3.2.2.21 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
GAMOKDAL_02067 3.8e-271 ndhF 1.6.5.3 CP COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit
GAMOKDAL_02068 0.0 ybcC S Belongs to the UPF0753 family
GAMOKDAL_02069 3.6e-91 can 4.2.1.1 P carbonic anhydrase
GAMOKDAL_02070 8.7e-47
GAMOKDAL_02071 4.7e-61 ybcI S Uncharacterized conserved protein (DUF2294)
GAMOKDAL_02072 5.1e-50 ybzH K Helix-turn-helix domain
GAMOKDAL_02073 3.5e-203 ybcL EGP Major facilitator Superfamily
GAMOKDAL_02074 4.9e-57
GAMOKDAL_02076 1.1e-138 KLT Protein tyrosine kinase
GAMOKDAL_02077 5.5e-150 ybdN
GAMOKDAL_02078 3.7e-213 ybdO S Domain of unknown function (DUF4885)
GAMOKDAL_02079 1.5e-258 yifK E COG1113 Gamma-aminobutyrate permease and related permeases
GAMOKDAL_02080 6.2e-32 csgA S Sigma-G-dependent sporulation-specific SASP protein
GAMOKDAL_02081 4.9e-30 ybxH S Family of unknown function (DUF5370)
GAMOKDAL_02082 9.8e-149 ybxI 3.5.2.6 V beta-lactamase
GAMOKDAL_02083 7.8e-246 cypC 1.11.2.4, 1.14.14.1 Q Cytochrome P450
GAMOKDAL_02084 1.4e-40 ybyB
GAMOKDAL_02085 6.8e-290 ybeC E amino acid
GAMOKDAL_02086 1e-162 glpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
GAMOKDAL_02087 7.3e-258 glpT G -transporter
GAMOKDAL_02088 1.5e-34 S Protein of unknown function (DUF2651)
GAMOKDAL_02089 2.8e-168 ybfA 3.4.15.5 K FR47-like protein
GAMOKDAL_02090 7.9e-222 ybfB G COG0477 Permeases of the major facilitator superfamily
GAMOKDAL_02092 0.0 ybfG 3.2.1.132 M Domain of unknown function (DUF1906)
GAMOKDAL_02093 3.7e-160 ybfH EG EamA-like transporter family
GAMOKDAL_02094 3.3e-144 msmR K AraC-like ligand binding domain
GAMOKDAL_02095 8e-148 draG 3.2.2.24 O ADP-ribosylglycohydrolase
GAMOKDAL_02096 1.8e-77 M nucleic acid phosphodiester bond hydrolysis
GAMOKDAL_02097 5.2e-212 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
GAMOKDAL_02098 5.8e-177 mpr 3.4.21.19 M Belongs to the peptidase S1B family
GAMOKDAL_02100 1.1e-164 S Alpha/beta hydrolase family
GAMOKDAL_02101 9.2e-95 pssA 2.7.8.8 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GAMOKDAL_02102 2.7e-85 ybfM S SNARE associated Golgi protein
GAMOKDAL_02103 8.1e-148 psd 4.1.1.65 I Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)
GAMOKDAL_02104 4.6e-45 ybfN
GAMOKDAL_02105 1.3e-249 S Erythromycin esterase
GAMOKDAL_02106 3.9e-192 yceA S Belongs to the UPF0176 family
GAMOKDAL_02107 6.4e-216 gltP C Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
GAMOKDAL_02108 0.0 ptsG 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
GAMOKDAL_02109 9.1e-133 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GAMOKDAL_02110 1.4e-127 K UTRA
GAMOKDAL_02111 4.5e-202 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
GAMOKDAL_02112 6.7e-262 mmuP E amino acid
GAMOKDAL_02113 6.7e-181 mmuM 1.5.1.20, 2.1.1.10 H homocysteine
GAMOKDAL_02115 2.5e-256 agcS E Sodium alanine symporter
GAMOKDAL_02116 3.8e-187 glsA 3.5.1.2 E Belongs to the glutaminase family
GAMOKDAL_02117 4.2e-229 phoQ 2.7.13.3 T Histidine kinase
GAMOKDAL_02118 1.5e-169 glnL T Regulator
GAMOKDAL_02119 2.7e-174 kdgD 4.2.1.41 EM 5-dehydro-4-deoxyglucarate dehydratase activity
GAMOKDAL_02120 1.5e-272 ycbD C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
GAMOKDAL_02121 4.5e-255 gudP G COG0477 Permeases of the major facilitator superfamily
GAMOKDAL_02122 6.7e-267 gudD 4.2.1.40 M Belongs to the mandelate racemase muconate lactonizing enzyme family
GAMOKDAL_02123 1.5e-124 ycbG K FCD
GAMOKDAL_02124 3.8e-295 garD 4.2.1.42, 4.2.1.7 G Altronate
GAMOKDAL_02125 2.6e-177 ycbJ S Macrolide 2'-phosphotransferase
GAMOKDAL_02126 5.7e-24 rtpA K Tryptophan RNA-binding attenuator protein inhibitory protein
GAMOKDAL_02127 3.4e-169 eamA1 EG spore germination
GAMOKDAL_02128 3.6e-123 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
GAMOKDAL_02129 3.2e-167 T PhoQ Sensor
GAMOKDAL_02130 5e-165 ycbN V ABC transporter, ATP-binding protein
GAMOKDAL_02131 5.1e-114 S ABC-2 family transporter protein
GAMOKDAL_02132 8.2e-53 ycbP S Protein of unknown function (DUF2512)
GAMOKDAL_02133 2.2e-78 sleB 3.5.1.28 M Cell wall
GAMOKDAL_02134 1.2e-134 ycbR T vWA found in TerF C terminus
GAMOKDAL_02135 0.0 phoD 3.1.3.1 P COG3540 Phosphodiesterase alkaline phosphatase D
GAMOKDAL_02136 5e-28 tatA U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
GAMOKDAL_02137 1.7e-123 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
GAMOKDAL_02138 6.5e-119 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GAMOKDAL_02139 2.3e-204 ycbU E Selenocysteine lyase
GAMOKDAL_02140 7.9e-226 lmrB EGP the major facilitator superfamily
GAMOKDAL_02141 7e-101 yxaF K Transcriptional regulator
GAMOKDAL_02142 5.3e-201 ansB 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
GAMOKDAL_02143 5.6e-115 lip 3.1.1.3 S acetyltransferases and hydrolases with the alpha beta hydrolase fold
GAMOKDAL_02144 3.4e-59 S RDD family
GAMOKDAL_02145 9.5e-200 yccF K DNA-templated transcriptional preinitiation complex assembly
GAMOKDAL_02146 6.8e-157 2.7.13.3 T GHKL domain
GAMOKDAL_02147 3.9e-125 lytR_2 T LytTr DNA-binding domain
GAMOKDAL_02148 1.2e-132 natA 3.6.3.7 CP ATPases associated with a variety of cellular activities
GAMOKDAL_02149 1.3e-76 natB CP ABC-2 family transporter protein
GAMOKDAL_02150 1.6e-37 natB CP ABC-2 family transporter protein
GAMOKDAL_02151 1.9e-54 natB CP ABC-2 family transporter protein
GAMOKDAL_02152 8.6e-173 yccK C Aldo keto reductase
GAMOKDAL_02153 6.6e-177 ycdA S Domain of unknown function (DUF5105)
GAMOKDAL_02154 3.9e-278 ycdB K Belongs to the sigma-70 factor family. ECF subfamily
GAMOKDAL_02155 5.1e-260 ycdC K Belongs to the sigma-70 factor family. ECF subfamily
GAMOKDAL_02156 1.6e-93 cwlK M D-alanyl-D-alanine carboxypeptidase
GAMOKDAL_02157 1.2e-173 S response regulator aspartate phosphatase
GAMOKDAL_02158 1e-139 IQ Enoyl-(Acyl carrier protein) reductase
GAMOKDAL_02159 0.0 ycdG 3.2.1.10 GH13 G COG0366 Glycosidases
GAMOKDAL_02160 1.2e-166 adcA P Belongs to the bacterial solute-binding protein 9 family
GAMOKDAL_02161 9.4e-132 adcC P 'COG1121 ABC-type Mn Zn transport systems, ATPase component'
GAMOKDAL_02162 1.7e-135 adcB P COG1108 ABC-type Mn2 Zn2 transport systems, permease components
GAMOKDAL_02163 1.4e-184 yceB C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GAMOKDAL_02164 5.1e-110 yceC 3.5.4.33 T proteins involved in stress response, homologs of TerZ and
GAMOKDAL_02165 2.8e-105 yceD T proteins involved in stress response, homologs of TerZ and
GAMOKDAL_02166 4.6e-108 yceE T proteins involved in stress response, homologs of TerZ and
GAMOKDAL_02167 1.4e-136 terC P Protein of unknown function (DUF475)
GAMOKDAL_02168 0.0 yceG S Putative component of 'biosynthetic module'
GAMOKDAL_02169 2e-192 yceH P Belongs to the TelA family
GAMOKDAL_02170 6.6e-218 naiP P Uncharacterised MFS-type transporter YbfB
GAMOKDAL_02171 5.7e-206 yceJ EGP Uncharacterised MFS-type transporter YbfB
GAMOKDAL_02172 1.6e-45 K helix_turn_helix, Arsenical Resistance Operon Repressor
GAMOKDAL_02173 5.1e-229 proV 3.6.3.32 E glycine betaine
GAMOKDAL_02174 1.3e-127 opuAB P glycine betaine
GAMOKDAL_02175 5.3e-164 opuAC E glycine betaine
GAMOKDAL_02176 4.1e-217 amhX S amidohydrolase
GAMOKDAL_02177 8.1e-255 ycgA S Membrane
GAMOKDAL_02178 4.1e-81 ycgB
GAMOKDAL_02179 2.1e-193 amyE 3.2.1.1 GH13 G alpha-amylase
GAMOKDAL_02180 2.2e-173 amyE 3.2.1.1 GH13 G alpha-amylase
GAMOKDAL_02181 9.5e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
GAMOKDAL_02182 1.4e-292 lctP C L-lactate permease
GAMOKDAL_02183 3.9e-263 mdr EGP Major facilitator Superfamily
GAMOKDAL_02184 1.3e-76 emrR K helix_turn_helix multiple antibiotic resistance protein
GAMOKDAL_02185 6.8e-113 ycgF E Lysine exporter protein LysE YggA
GAMOKDAL_02186 4.9e-150 yqcI S YqcI/YcgG family
GAMOKDAL_02187 1.4e-248 ycgH E COG1113 Gamma-aminobutyrate permease and related permeases
GAMOKDAL_02188 2.4e-112 ycgI S Domain of unknown function (DUF1989)
GAMOKDAL_02189 1.5e-149 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
GAMOKDAL_02190 4.7e-108 tmrB S AAA domain
GAMOKDAL_02191 3e-104 aroK 2.7.1.71, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
GAMOKDAL_02192 3.1e-144 yafE Q ubiE/COQ5 methyltransferase family
GAMOKDAL_02193 3.2e-178 oxyR3 K LysR substrate binding domain
GAMOKDAL_02194 4.2e-183 cah 3.1.1.41 Q Acetyl xylan esterase (AXE1)
GAMOKDAL_02195 6.4e-145 ycgL S Predicted nucleotidyltransferase
GAMOKDAL_02196 5.1e-170 ycgM E Proline dehydrogenase
GAMOKDAL_02197 7.3e-294 rocA 1.2.1.88, 1.5.5.2 C Belongs to the aldehyde dehydrogenase family. RocA subfamily
GAMOKDAL_02198 9e-248 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GAMOKDAL_02199 1.6e-227 ycgP QT COG2508 Regulator of polyketide synthase expression
GAMOKDAL_02200 2.2e-143 ycgQ S membrane
GAMOKDAL_02201 2e-139 ycgR S permeases
GAMOKDAL_02202 6.5e-159 I alpha/beta hydrolase fold
GAMOKDAL_02203 3e-187 ycgT 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
GAMOKDAL_02204 6e-274 cobA 2.1.1.107, 4.2.1.75 H Belongs to the precorrin methyltransferase family
GAMOKDAL_02205 4.6e-57 nirD 1.7.1.15 P Nitrite reductase
GAMOKDAL_02206 0.0 nirB 1.7.1.15 C Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
GAMOKDAL_02207 0.0 nasC C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
GAMOKDAL_02208 0.0 nirB 1.7.1.15 C Assimilatory nitrate reductase (electron transfer subunit)
GAMOKDAL_02209 2.9e-221 nasA P COG2223 Nitrate nitrite transporter
GAMOKDAL_02210 6.7e-170 folE2 3.5.4.16 S Converts GTP to 7,8-dihydroneopterin triphosphate
GAMOKDAL_02211 2e-106 yciB M ErfK YbiS YcfS YnhG
GAMOKDAL_02212 7e-228 yciC S GTPases (G3E family)
GAMOKDAL_02213 2.4e-116 yecS P COG0765 ABC-type amino acid transport system, permease component
GAMOKDAL_02214 3.4e-131 yckB ET COG0834 ABC-type amino acid transport signal transduction systems, periplasmic component domain
GAMOKDAL_02216 9.6e-77 yckC S membrane
GAMOKDAL_02217 3.5e-52 yckD S Protein of unknown function (DUF2680)
GAMOKDAL_02218 6.1e-295 yckE 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GAMOKDAL_02219 3.2e-68 nin S Competence protein J (ComJ)
GAMOKDAL_02220 7.8e-71 nucA M Deoxyribonuclease NucA/NucB
GAMOKDAL_02221 1e-179 tlpC 2.7.13.3 NT chemotaxis protein
GAMOKDAL_02222 3.3e-95 hxlB 4.1.2.43, 5.3.1.27 G SIS domain
GAMOKDAL_02223 8e-106 hxlA 4.1.2.43 G 3-hexulose-6-phosphate synthase
GAMOKDAL_02224 1.3e-63 hxlR K transcriptional
GAMOKDAL_02225 0.0 srfAA Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GAMOKDAL_02226 0.0 srfAC Q COG1020 Non-ribosomal peptide synthetase modules and related proteins
GAMOKDAL_02227 5.7e-140 srfAD Q thioesterase
GAMOKDAL_02228 2e-225 EGP Major Facilitator Superfamily
GAMOKDAL_02229 9.6e-87 S YcxB-like protein
GAMOKDAL_02230 2.9e-160 ycxC EG EamA-like transporter family
GAMOKDAL_02231 2.3e-251 ycxD K GntR family transcriptional regulator
GAMOKDAL_02232 1.5e-113 acpT 2.7.8.7 H Belongs to the P-Pant transferase superfamily
GAMOKDAL_02233 1.7e-114 yczE S membrane
GAMOKDAL_02234 1.4e-133 tcyC 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
GAMOKDAL_02235 6.2e-123 tcyB P COG0765 ABC-type amino acid transport system, permease component
GAMOKDAL_02236 2e-125 tcyA ET Belongs to the bacterial solute-binding protein 3 family
GAMOKDAL_02237 1.9e-161 bsdA K LysR substrate binding domain
GAMOKDAL_02238 8.3e-108 ubiX 2.5.1.129 H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
GAMOKDAL_02239 4.1e-283 yclC 4.1.1.61 H Decarboxylase involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions. It is able to catalyze the reversible decarboxylation of 4-hydroxybenzoate
GAMOKDAL_02240 4e-39 bsdD 4.1.1.61 S response to toxic substance
GAMOKDAL_02241 3.5e-82 yclD
GAMOKDAL_02242 4.4e-160 yclE 3.4.11.5 S Alpha beta hydrolase
GAMOKDAL_02243 1.4e-262 dtpT E amino acid peptide transporter
GAMOKDAL_02244 2.5e-298 yclG M Pectate lyase superfamily protein
GAMOKDAL_02246 5.4e-279 gerKA EG Spore germination protein
GAMOKDAL_02247 9.1e-223 gerKC S spore germination
GAMOKDAL_02248 1.8e-193 gerKB F Spore germination protein
GAMOKDAL_02249 1.6e-120 yclH P ABC transporter
GAMOKDAL_02250 1.3e-202 yclI V ABC transporter (permease) YclI
GAMOKDAL_02251 1.4e-127 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
GAMOKDAL_02252 4.4e-261 yclK 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
GAMOKDAL_02253 2e-70 S aspartate phosphatase
GAMOKDAL_02257 7.7e-239 lysC 2.7.2.4 E Belongs to the aspartokinase family
GAMOKDAL_02258 3.5e-161 yclN P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GAMOKDAL_02259 2.6e-164 fatC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GAMOKDAL_02260 1.8e-136 yclP 3.6.3.34 P ABC transporter, ATP-binding protein
GAMOKDAL_02261 8.5e-168 yclQ P COG4607 ABC-type enterochelin transport system, periplasmic component
GAMOKDAL_02262 3.2e-251 ycnB EGP Major facilitator Superfamily
GAMOKDAL_02263 4.2e-153 ycnC K Transcriptional regulator
GAMOKDAL_02264 4.4e-135 nfrA2 1.5.1.38, 1.5.1.39 C Oxidoreductase
GAMOKDAL_02265 2.8e-45 ycnE S Monooxygenase
GAMOKDAL_02266 2.2e-51 yczG K helix_turn_helix, Arsenical Resistance Operon Repressor
GAMOKDAL_02267 5.1e-273 gabR K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
GAMOKDAL_02268 3.4e-244 gabT 2.6.1.19, 2.6.1.22 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
GAMOKDAL_02269 1.4e-264 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
GAMOKDAL_02270 6.1e-149 glcU U Glucose uptake
GAMOKDAL_02271 9.9e-146 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
GAMOKDAL_02272 9.3e-99 ycnI S protein conserved in bacteria
GAMOKDAL_02273 3.9e-306 ycnJ P protein, homolog of Cu resistance protein CopC
GAMOKDAL_02274 3.3e-106 ycnK K COG1349 Transcriptional regulators of sugar metabolism
GAMOKDAL_02275 2.6e-53
GAMOKDAL_02276 7.4e-240 mtlA 2.7.1.197 G COG2213 Phosphotransferase system, mannitol-specific IIBC component
GAMOKDAL_02277 2e-71 mtlF 2.7.1.197 G COG4668 Mannitol fructose-specific phosphotransferase system, IIA domain
GAMOKDAL_02278 4e-209 mtlD 1.1.1.17 G COG0246 Mannitol-1-phosphate altronate dehydrogenases
GAMOKDAL_02279 3.8e-201 ycsA 1.1.1.83, 1.1.1.93, 4.1.1.73 CE Tartrate dehydrogenase
GAMOKDAL_02280 2.1e-09 sipT 3.4.21.89 U Belongs to the peptidase S26 family
GAMOKDAL_02281 1.7e-75 sipT 3.4.21.89 U Belongs to the peptidase S26 family
GAMOKDAL_02282 2.8e-108 M1-673 3.1.1.45 Q COG0412 Dienelactone hydrolase and related enzymes
GAMOKDAL_02283 1.3e-66 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
GAMOKDAL_02285 8e-137 ycsE 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
GAMOKDAL_02286 6.7e-139 ycsF S Belongs to the UPF0271 (lamB) family
GAMOKDAL_02287 2.7e-211 ycsG P COG1914 Mn2 and Fe2 transporters of the NRAMP family
GAMOKDAL_02288 9.6e-149 ycsI S Belongs to the D-glutamate cyclase family
GAMOKDAL_02289 9.4e-135 kipI 3.5.1.54 E Allophanate hydrolase subunit 1
GAMOKDAL_02290 7.3e-186 kipA 6.3.4.6 E Allophanate hydrolase subunit 2
GAMOKDAL_02291 2.7e-132 kipR K Transcriptional regulator
GAMOKDAL_02292 3e-116 ycsK E anatomical structure formation involved in morphogenesis
GAMOKDAL_02294 5.4e-49 yczJ S biosynthesis
GAMOKDAL_02295 0.0 pbpC 3.4.16.4 M Penicillin-binding Protein
GAMOKDAL_02296 3.4e-174 ydhF S Oxidoreductase
GAMOKDAL_02297 0.0 mtlR K transcriptional regulator, MtlR
GAMOKDAL_02298 8.7e-292 ydaB IQ acyl-CoA ligase
GAMOKDAL_02299 7.6e-98 ydaC Q Methyltransferase domain
GAMOKDAL_02300 3.1e-161 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
GAMOKDAL_02301 1.2e-96 MA20_27600 5.3.1.15 S Cupin 2, conserved barrel domain protein
GAMOKDAL_02302 4.7e-102 rimL 1.1.1.25 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
GAMOKDAL_02303 6.8e-77 ydaG 1.4.3.5 S general stress protein
GAMOKDAL_02304 4.1e-139 amj U Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane
GAMOKDAL_02305 3.3e-46 ydzA EGP Major facilitator Superfamily
GAMOKDAL_02306 2.5e-74 lrpC K Transcriptional regulator
GAMOKDAL_02307 0.0 topB 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GAMOKDAL_02308 3.1e-206 ydaJ M Belongs to the glycosyl hydrolase 8 (cellulase D) family
GAMOKDAL_02309 2.7e-149 ydaK T Diguanylate cyclase, GGDEF domain
GAMOKDAL_02310 0.0 ydaL S Uncharacterized protein conserved in bacteria (DUF2334)
GAMOKDAL_02311 4.5e-233 ydaM M Glycosyl transferase family group 2
GAMOKDAL_02312 0.0 ydaN S Bacterial cellulose synthase subunit
GAMOKDAL_02313 0.0 ydaO E amino acid
GAMOKDAL_02314 1.6e-76 mutT 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
GAMOKDAL_02315 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
GAMOKDAL_02316 4.7e-39
GAMOKDAL_02317 5e-224 mntH P H( )-stimulated, divalent metal cation uptake system
GAMOKDAL_02319 2.8e-76 ydaT S Uncharacterized protein conserved in bacteria (DUF2188)
GAMOKDAL_02320 2.7e-146 ydbA 3.6.3.4, 3.6.3.54 P EcsC protein family
GAMOKDAL_02322 8.9e-59 ydbB G Cupin domain
GAMOKDAL_02323 1.8e-62 ydbC S Domain of unknown function (DUF4937
GAMOKDAL_02324 1e-153 ydbD P Catalase
GAMOKDAL_02325 3.5e-199 dctB G COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component
GAMOKDAL_02326 4.8e-296 dctS 2.7.13.3 T Signal transduction histidine kinase regulating citrate malate metabolism
GAMOKDAL_02327 1.1e-119 dctR T COG4565 Response regulator of citrate malate metabolism
GAMOKDAL_02328 1.4e-226 dctA U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
GAMOKDAL_02329 9.7e-181 ydbI S AI-2E family transporter
GAMOKDAL_02330 8e-171 ydbJ V ABC transporter, ATP-binding protein
GAMOKDAL_02331 9.4e-125 ydbK S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
GAMOKDAL_02332 2.7e-52 ydbL
GAMOKDAL_02333 3.4e-219 ydbM 1.3.8.1 I acyl-CoA dehydrogenase
GAMOKDAL_02334 1.1e-18 S Fur-regulated basic protein B
GAMOKDAL_02335 2.2e-07 S Fur-regulated basic protein A
GAMOKDAL_02336 2.5e-150 yeaB P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GAMOKDAL_02337 2.3e-56 ydbP 2.7.1.180, 5.3.4.1 CO Thioredoxin
GAMOKDAL_02338 3.9e-201 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
GAMOKDAL_02339 2.3e-257 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
GAMOKDAL_02340 9e-249 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
GAMOKDAL_02341 2.1e-82 ydbS S Bacterial PH domain
GAMOKDAL_02342 3.7e-263 ydbT S Membrane
GAMOKDAL_02343 2.4e-107 ydcA 3.4.21.105 S membrane protein (homolog of Drosophila rhomboid)
GAMOKDAL_02344 4.7e-58 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
GAMOKDAL_02345 2.5e-182 ydcC M COG2834 Outer membrane lipoprotein-sorting protein
GAMOKDAL_02346 1.9e-222 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GAMOKDAL_02347 4.8e-42 ndoAI K transcriptional regulators containing the CopG Arc MetJ DNA-binding domain and a metal-binding domain
GAMOKDAL_02348 2.5e-56 ndoA L Toxic component of a toxin-antitoxin (TA) module
GAMOKDAL_02349 6.9e-142 rsbR T Positive regulator of sigma-B
GAMOKDAL_02350 5.2e-57 rsbS T antagonist
GAMOKDAL_02351 1.3e-69 rsbT 2.7.11.1 T COG2172 Anti-sigma regulatory factor (Ser Thr protein kinase)
GAMOKDAL_02352 7.1e-189 rsbU 3.1.3.3 KT phosphatase
GAMOKDAL_02353 7e-53 rsbV T Belongs to the anti-sigma-factor antagonist family
GAMOKDAL_02354 2.4e-86 rsbW 2.7.11.1 F Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B)
GAMOKDAL_02355 3.4e-138 sigB K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
GAMOKDAL_02356 4.8e-108 rsbX 3.1.3.16, 3.1.3.3 KT Sigma factor PP2C-like phosphatases
GAMOKDAL_02357 0.0 yhgF K COG2183 Transcriptional accessory protein
GAMOKDAL_02358 8.9e-83 ydcK S Belongs to the SprT family
GAMOKDAL_02365 3.1e-86 L Phage integrase family
GAMOKDAL_02366 9.4e-25 S Domain of unknown function with cystatin-like fold (DUF4467)
GAMOKDAL_02367 1.8e-156 3.6.4.12 L HELICc2
GAMOKDAL_02369 1.6e-50
GAMOKDAL_02370 8e-47 S SMI1-KNR4 cell-wall
GAMOKDAL_02371 1.6e-43
GAMOKDAL_02372 2.9e-142 L A nuclease of the HNH/ENDO VII superfamily with conserved LHH
GAMOKDAL_02373 1.9e-69 L HNH nucleases
GAMOKDAL_02375 1.7e-32 K Helix-turn-helix XRE-family like proteins
GAMOKDAL_02376 4.6e-42
GAMOKDAL_02377 3.5e-191 des 1.14.19.23, 1.14.19.45 I fatty acid desaturase
GAMOKDAL_02378 8.7e-30 cspL K Cold shock
GAMOKDAL_02379 6.1e-79 carD K Transcription factor
GAMOKDAL_02380 1.4e-143 ydzE EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
GAMOKDAL_02381 1.2e-163 rhaS5 K AraC-like ligand binding domain
GAMOKDAL_02382 3.7e-171 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
GAMOKDAL_02383 6.2e-165 ydeE K AraC family transcriptional regulator
GAMOKDAL_02384 2.8e-260 K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
GAMOKDAL_02385 4.6e-217 ydeG EGP Major facilitator superfamily
GAMOKDAL_02386 5.2e-44 ydeH
GAMOKDAL_02387 3.9e-102 ydeI S Bacteriocin-protection, YdeI or OmpD-Associated
GAMOKDAL_02388 4.4e-107
GAMOKDAL_02389 4.9e-15 ptsH G PTS HPr component phosphorylation site
GAMOKDAL_02390 2.3e-85 K Transcriptional regulator C-terminal region
GAMOKDAL_02391 5e-151 ydeK EG -transporter
GAMOKDAL_02392 2.1e-271 ydeL K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
GAMOKDAL_02393 4.2e-74 maoC I N-terminal half of MaoC dehydratase
GAMOKDAL_02394 2.8e-105 ydeN S Serine hydrolase
GAMOKDAL_02395 1.5e-55 K HxlR-like helix-turn-helix
GAMOKDAL_02396 6e-152 yqfU S Uncharacterized protein conserved in bacteria (DUF2179)
GAMOKDAL_02397 1.8e-68 ydeP K Transcriptional regulator
GAMOKDAL_02398 1e-107 ydeQ S NADPH-quinone reductase (modulator of drug activity B)
GAMOKDAL_02399 3.1e-191 ydeR EGP Major facilitator Superfamily
GAMOKDAL_02400 2.1e-103 ydeS K Transcriptional regulator
GAMOKDAL_02401 6.3e-57 arsR K transcriptional
GAMOKDAL_02402 1.1e-229 arsB P Involved in arsenical resistance. Thought to form the channel of an arsenite pump
GAMOKDAL_02403 1.5e-146 ydfB J GNAT acetyltransferase
GAMOKDAL_02404 1.7e-160 ydfC EG EamA-like transporter family
GAMOKDAL_02405 6e-274 ydfD K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
GAMOKDAL_02406 1.4e-115 ydfE S Flavin reductase like domain
GAMOKDAL_02407 2.7e-123 ydfF K helix_turn_helix, Arsenical Resistance Operon Repressor
GAMOKDAL_02408 1e-78 ydfG S Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
GAMOKDAL_02410 2.6e-179 ydfH 2.7.13.3 T Histidine kinase
GAMOKDAL_02411 1.4e-110 ydfI K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
GAMOKDAL_02412 0.0 ydfJ S drug exporters of the RND superfamily
GAMOKDAL_02413 1.4e-175 S Alpha/beta hydrolase family
GAMOKDAL_02414 8.5e-117 S Protein of unknown function (DUF554)
GAMOKDAL_02415 9.2e-147 K Bacterial transcription activator, effector binding domain
GAMOKDAL_02416 7.8e-155 fieF P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GAMOKDAL_02417 1.4e-110 ydfN C nitroreductase
GAMOKDAL_02418 1.2e-185 ydfO E COG0346 Lactoylglutathione lyase and related lyases
GAMOKDAL_02419 8.8e-63 mhqP S DoxX
GAMOKDAL_02420 7e-56 traF CO Thioredoxin
GAMOKDAL_02422 7.1e-15 ydgA S Spore germination protein gerPA/gerPF
GAMOKDAL_02423 6.3e-29
GAMOKDAL_02425 4.4e-118 ydfR S Protein of unknown function (DUF421)
GAMOKDAL_02426 7.6e-121 ydfS S Protein of unknown function (DUF421)
GAMOKDAL_02427 1.7e-75 cotP O Belongs to the small heat shock protein (HSP20) family
GAMOKDAL_02428 1.4e-37 ydgA S Spore germination protein gerPA/gerPF
GAMOKDAL_02429 1.3e-41 ydgB S Spore germination protein gerPA/gerPF
GAMOKDAL_02430 2.8e-100 K Bacterial regulatory proteins, tetR family
GAMOKDAL_02431 1.6e-52 S DoxX-like family
GAMOKDAL_02432 3.8e-84 yycN 2.3.1.128 K Acetyltransferase
GAMOKDAL_02433 4e-298 expZ S ABC transporter
GAMOKDAL_02434 4e-251 cycA E COG1113 Gamma-aminobutyrate permease and related permeases
GAMOKDAL_02435 2.5e-89 dinB S DinB family
GAMOKDAL_02436 8.9e-79 K helix_turn_helix multiple antibiotic resistance protein
GAMOKDAL_02437 0.0 ydgH S drug exporters of the RND superfamily
GAMOKDAL_02438 1e-113 drgA C nitroreductase
GAMOKDAL_02439 2.4e-69 ydgJ K Winged helix DNA-binding domain
GAMOKDAL_02440 7.4e-209 tcaB EGP Major facilitator Superfamily
GAMOKDAL_02441 1.2e-121 ydhB S membrane transporter protein
GAMOKDAL_02442 6.5e-122 ydhC K FCD
GAMOKDAL_02443 1.6e-243 ydhD M Glycosyl hydrolase
GAMOKDAL_02444 2.7e-227 ydhE CG COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
GAMOKDAL_02445 6.2e-123
GAMOKDAL_02446 1.8e-259 phoB 3.1.3.1 P Belongs to the alkaline phosphatase family
GAMOKDAL_02447 2.1e-66 frataxin S Domain of unknown function (DU1801)
GAMOKDAL_02449 2.8e-82 K Acetyltransferase (GNAT) domain
GAMOKDAL_02450 1.9e-183 ydhJ S Metal dependent phosphohydrolases with conserved 'HD' motif.
GAMOKDAL_02451 2.5e-98 ydhK M Protein of unknown function (DUF1541)
GAMOKDAL_02452 4.6e-200 pbuE EGP Major facilitator Superfamily
GAMOKDAL_02453 1.9e-47 ydhM 2.7.1.196, 2.7.1.205 G phosphotransferase system
GAMOKDAL_02454 3e-51 ydhN3 2.7.1.196, 2.7.1.205 G phosphotransferase system
GAMOKDAL_02455 2.6e-239 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GAMOKDAL_02456 6.2e-284 ydhP 3.2.1.21, 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GAMOKDAL_02457 1.1e-132 ydhQ K UTRA
GAMOKDAL_02458 8.9e-167 gmuE 2.7.1.2, 2.7.1.4 GK COG1940 Transcriptional regulator sugar kinase
GAMOKDAL_02459 2.5e-188 manA 5.3.1.8 G mannose-6-phosphate isomerase
GAMOKDAL_02460 6.2e-215 gmuG 3.2.1.78 GH26 G Belongs to the glycosyl hydrolase 26 family
GAMOKDAL_02461 6.1e-157 ydhU P Catalase
GAMOKDAL_02464 1e-139 pdaB 3.5.1.104 G Polysaccharide deacetylase
GAMOKDAL_02465 1.3e-102 kbaA 2.7.8.43 S Involved in the activation of the KinB signaling pathway of sporulation
GAMOKDAL_02466 1.2e-84 gerD
GAMOKDAL_02467 1.4e-198 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
GAMOKDAL_02468 1.9e-132 cwlD 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
GAMOKDAL_02469 9.7e-66 ybaK S Protein of unknown function (DUF2521)
GAMOKDAL_02470 9e-144 ybaJ Q Methyltransferase domain
GAMOKDAL_02471 4.7e-64 rpsI J Belongs to the universal ribosomal protein uS9 family
GAMOKDAL_02472 6.4e-78 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GAMOKDAL_02473 2.6e-140 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
GAMOKDAL_02474 1e-118 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GAMOKDAL_02475 3.7e-154 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GAMOKDAL_02476 1.9e-155 cbiO P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GAMOKDAL_02477 3.6e-58 rplQ J Ribosomal protein L17
GAMOKDAL_02478 3.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GAMOKDAL_02479 2.1e-64 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GAMOKDAL_02480 3.1e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GAMOKDAL_02481 4.2e-13 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
GAMOKDAL_02482 1.1e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GAMOKDAL_02483 3.7e-142 map 3.4.11.18 E Methionine aminopeptidase
GAMOKDAL_02484 1.3e-122 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
GAMOKDAL_02485 4.2e-234 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
GAMOKDAL_02486 1.8e-72 rplO J binds to the 23S rRNA
GAMOKDAL_02487 1.9e-23 rpmD J Ribosomal protein L30
GAMOKDAL_02488 3.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GAMOKDAL_02489 4e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GAMOKDAL_02490 1.3e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GAMOKDAL_02491 3.9e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GAMOKDAL_02492 3.4e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GAMOKDAL_02493 4.6e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GAMOKDAL_02494 6.2e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GAMOKDAL_02495 3.9e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GAMOKDAL_02496 3.5e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GAMOKDAL_02497 1.7e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
GAMOKDAL_02498 1.3e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GAMOKDAL_02499 6.2e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GAMOKDAL_02500 4.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GAMOKDAL_02501 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GAMOKDAL_02502 1.5e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GAMOKDAL_02503 1.2e-43 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
GAMOKDAL_02504 3.9e-105 rplD J Forms part of the polypeptide exit tunnel
GAMOKDAL_02505 6.3e-111 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GAMOKDAL_02506 7.5e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
GAMOKDAL_02507 3.7e-179 ybaC 3.4.11.5 S Alpha/beta hydrolase family
GAMOKDAL_02508 2.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GAMOKDAL_02509 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GAMOKDAL_02510 6e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
GAMOKDAL_02511 8.5e-72 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GAMOKDAL_02512 8e-33 ybxF J Belongs to the eukaryotic ribosomal protein eL8 family
GAMOKDAL_02513 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GAMOKDAL_02514 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GAMOKDAL_02515 8.2e-108 rsmC 2.1.1.172 J Methyltransferase
GAMOKDAL_02516 1.3e-42 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
GAMOKDAL_02517 5.1e-79 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GAMOKDAL_02518 1.1e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
GAMOKDAL_02519 2.8e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GAMOKDAL_02520 5.2e-96 nusG K Participates in transcription elongation, termination and antitermination
GAMOKDAL_02521 1e-21 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
GAMOKDAL_02522 4.4e-115 sigH K Belongs to the sigma-70 factor family
GAMOKDAL_02523 1.2e-88 yacP S RNA-binding protein containing a PIN domain
GAMOKDAL_02524 9.8e-135 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GAMOKDAL_02525 1e-72 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
GAMOKDAL_02526 5.5e-272 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
GAMOKDAL_02527 7.2e-118 cysE 2.3.1.30 E Serine acetyltransferase
GAMOKDAL_02528 2.5e-280 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GAMOKDAL_02529 3.5e-85 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 I Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
GAMOKDAL_02530 7.2e-124 ispD 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
GAMOKDAL_02531 2.7e-197 yacL S COG4956 Integral membrane protein (PIN domain superfamily)
GAMOKDAL_02532 1.3e-196 disA 2.7.7.85 L Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
GAMOKDAL_02533 9.6e-256 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GAMOKDAL_02534 0.0 clpC O Belongs to the ClpA ClpB family
GAMOKDAL_02535 6.1e-202 mcsB 2.7.14.1, 2.7.3.2, 2.7.3.3 E Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity
GAMOKDAL_02536 1.6e-47 mcsA 2.7.14.1 S protein with conserved CXXC pairs
GAMOKDAL_02537 2.9e-76 ctsR K Belongs to the CtsR family
GAMOKDAL_02538 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GAMOKDAL_02539 0.0 6.3.2.14 Q amino acid activation for nonribosomal peptide biosynthetic process
GAMOKDAL_02540 3.1e-63 yngL S Protein of unknown function (DUF1360)
GAMOKDAL_02541 1.5e-302 yngK T Glycosyl hydrolase-like 10
GAMOKDAL_02542 2.8e-210 yngJ 1.3.8.1, 1.3.99.12 I acyl-CoA dehydrogenase
GAMOKDAL_02543 0.0 yngI IQ COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
GAMOKDAL_02544 4.7e-249 yngH 6.3.4.14, 6.4.1.2, 6.4.1.3, 6.4.1.4 I Biotin carboxylase
GAMOKDAL_02545 1.5e-30 pycB 2.3.1.12, 6.4.1.1 I Biotin carboxyl carrier protein
GAMOKDAL_02546 3.4e-166 mvaB 4.1.3.4, 6.4.1.4 E Hydroxymethylglutaryl-CoA lyase
GAMOKDAL_02547 7.1e-136 yngF 4.2.1.17 I Belongs to the enoyl-CoA hydratase isomerase family
GAMOKDAL_02548 5.9e-288 yngE 2.1.3.15, 6.4.1.3 I COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
GAMOKDAL_02549 3.6e-232 nrnB S phosphohydrolase (DHH superfamily)
GAMOKDAL_02550 5.5e-104 yngC S membrane-associated protein
GAMOKDAL_02551 3.5e-163 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
GAMOKDAL_02552 2e-79 yngA S membrane
GAMOKDAL_02553 3.2e-289 xynD3 3.2.1.55 CBM6,GH43 G Belongs to the glycosyl hydrolase 43 family
GAMOKDAL_02554 5.3e-250 xynC 3.2.1.136 GH5 M Belongs to the glycosyl hydrolase 30 family
GAMOKDAL_02556 1.2e-293 bglC5 3.2.1.4 GH5,GH9 G PFAM glycoside hydrolase family 5
GAMOKDAL_02557 1.8e-251 agcS E Sodium alanine symporter
GAMOKDAL_02558 8.6e-57 ynfC
GAMOKDAL_02559 2.3e-12
GAMOKDAL_02560 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GAMOKDAL_02561 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GAMOKDAL_02562 6.6e-69 yccU S CoA-binding protein
GAMOKDAL_02563 5e-94 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
GAMOKDAL_02564 4.1e-49 yneR S Belongs to the HesB IscA family
GAMOKDAL_02565 2.2e-53 yneQ
GAMOKDAL_02566 1.2e-73 yneP S Thioesterase-like superfamily
GAMOKDAL_02567 3.9e-35 tlp S Belongs to the Tlp family
GAMOKDAL_02568 3.1e-08 sspN S Small acid-soluble spore protein N family
GAMOKDAL_02570 1e-90 yneN CO alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
GAMOKDAL_02571 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
GAMOKDAL_02572 2.5e-14 sspO S Belongs to the SspO family
GAMOKDAL_02573 3.9e-19 sspP S Belongs to the SspP family
GAMOKDAL_02574 2.2e-63 hspX O Spore coat protein
GAMOKDAL_02575 4.2e-74 yneK S Protein of unknown function (DUF2621)
GAMOKDAL_02576 5.1e-76 yneJ O COG4846 Membrane protein involved in cytochrome C biogenesis
GAMOKDAL_02577 1.2e-58 cheB 3.1.1.61, 3.5.1.44 T cheY-homologous receiver domain
GAMOKDAL_02578 2.3e-125 ccdA O cytochrome c biogenesis protein
GAMOKDAL_02579 7.5e-14 ynzD S Spo0E like sporulation regulatory protein
GAMOKDAL_02580 1.8e-28 yneF S UPF0154 protein
GAMOKDAL_02581 2.2e-81 yneE S Sporulation inhibitor of replication protein sirA
GAMOKDAL_02582 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
GAMOKDAL_02583 1.3e-32 ynzC S UPF0291 protein
GAMOKDAL_02584 2.9e-111 yneB L resolvase
GAMOKDAL_02585 3.4e-49 yneA D Inhibits cell division during the SOS response. Affects a later stage of the cell division protein assembly, after the assembly of the Z ring, by probably suppressing recruitment of FtsL and or DivIC to the division machinery
GAMOKDAL_02586 2.6e-109 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GAMOKDAL_02587 4.9e-78 fosB 2.5.1.18 H Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor
GAMOKDAL_02588 1.7e-73 yndM S Protein of unknown function (DUF2512)
GAMOKDAL_02589 6.8e-136 yndL S Replication protein
GAMOKDAL_02591 2.8e-304 yndJ S YndJ-like protein
GAMOKDAL_02592 5.4e-115 yndH S Domain of unknown function (DUF4166)
GAMOKDAL_02593 1.4e-150 yndG S DoxX-like family
GAMOKDAL_02594 2.2e-216 gerLC S Spore germination protein
GAMOKDAL_02595 2.3e-193 gerAB U Spore germination
GAMOKDAL_02596 1.8e-284 gerAA EG Spore germination protein
GAMOKDAL_02599 7.5e-79 yndB S Activator of Hsp90 ATPase homolog 1-like protein
GAMOKDAL_02600 1.8e-71
GAMOKDAL_02601 7.9e-25 tatA U protein secretion
GAMOKDAL_02604 6.6e-131 S Domain of unknown function, YrpD
GAMOKDAL_02606 3.3e-163 S Thymidylate synthase
GAMOKDAL_02609 4.9e-78 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F Deoxyuridine 5'-triphosphate
GAMOKDAL_02610 2e-82 yncE S Protein of unknown function (DUF2691)
GAMOKDAL_02612 1.7e-218 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GAMOKDAL_02613 3.9e-246 iolT EGP Major facilitator Superfamily
GAMOKDAL_02614 8.2e-39 yokF 3.1.31.1 L RNA catabolic process
GAMOKDAL_02615 1.3e-290 xylB 2.7.1.12, 2.7.1.17, 2.7.1.5 G xylulose kinase
GAMOKDAL_02616 4.4e-263 xylA 5.3.1.5 G Belongs to the xylose isomerase family
GAMOKDAL_02617 2.8e-213 xylR GK ROK family
GAMOKDAL_02618 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
GAMOKDAL_02619 1.9e-253 xynT G MFS/sugar transport protein
GAMOKDAL_02620 2.3e-81 XK27_05370 5.3.1.24 E phosphoribosylanthranilate isomerase activity
GAMOKDAL_02622 1.3e-56 ynaF
GAMOKDAL_02623 8.1e-122 ynaE S Domain of unknown function (DUF3885)
GAMOKDAL_02624 3.6e-96 ynaD J Acetyltransferase (GNAT) domain
GAMOKDAL_02625 1.7e-93 G SMI1-KNR4 cell-wall
GAMOKDAL_02626 2.1e-36
GAMOKDAL_02627 8.5e-124
GAMOKDAL_02628 5.6e-30
GAMOKDAL_02629 3.8e-10
GAMOKDAL_02630 7e-261 glnA 6.3.1.2 E glutamine synthetase
GAMOKDAL_02631 1.1e-68 glnR K transcriptional
GAMOKDAL_02632 1.7e-243 ynbB 4.4.1.1 P COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance
GAMOKDAL_02633 6.7e-229 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GAMOKDAL_02634 1.7e-176 spoVK O stage V sporulation protein K
GAMOKDAL_02635 1.1e-112 cwlC 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
GAMOKDAL_02636 2e-109 ymaB
GAMOKDAL_02637 4.5e-188 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GAMOKDAL_02638 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GAMOKDAL_02639 1.9e-49 nrdI 1.17.4.1 F Probably involved in ribonucleotide reductase function
GAMOKDAL_02640 4.5e-22 ymzA
GAMOKDAL_02641 8.2e-23
GAMOKDAL_02642 1.9e-33 hfq J RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs
GAMOKDAL_02643 2.1e-174 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GAMOKDAL_02644 2.1e-46 ymaF S YmaF family
GAMOKDAL_02646 5.4e-50 ebrA P Small Multidrug Resistance protein
GAMOKDAL_02647 4.7e-55 ebrB P COG2076 Membrane transporters of cations and cationic drugs
GAMOKDAL_02648 1.6e-79 ymaD O redox protein, regulator of disulfide bond formation
GAMOKDAL_02649 1.3e-125 ymaC S Replication protein
GAMOKDAL_02650 1.9e-07 K Transcriptional regulator
GAMOKDAL_02651 6.6e-251 aprX O Belongs to the peptidase S8 family
GAMOKDAL_02652 2e-160 ymaE S Metallo-beta-lactamase superfamily
GAMOKDAL_02653 4.9e-60 ymzB
GAMOKDAL_02654 2e-230 cypA C Cytochrome P450
GAMOKDAL_02655 0.0 pks13 HQ Beta-ketoacyl synthase
GAMOKDAL_02656 0.0 dhbF IQ polyketide synthase
GAMOKDAL_02657 0.0 pfaA 4.1.1.35 GT4 IQ polyketide synthase
GAMOKDAL_02658 0.0 pfaA Q Polyketide synthase of type I
GAMOKDAL_02659 0.0 rhiB IQ polyketide synthase
GAMOKDAL_02660 2.6e-135 pksI I Belongs to the enoyl-CoA hydratase isomerase family
GAMOKDAL_02661 1.3e-142 pksH 4.2.1.18 I enoyl-CoA hydratase
GAMOKDAL_02662 8.7e-245 pksG 2.3.3.10 I synthase
GAMOKDAL_02663 2.7e-238 pksF 2.3.1.179, 2.3.1.41 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
GAMOKDAL_02664 1.8e-37 acpK IQ Phosphopantetheine attachment site
GAMOKDAL_02665 0.0 fabD 1.13.12.16, 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
GAMOKDAL_02666 1.6e-182 pksD Q Acyl transferase domain
GAMOKDAL_02668 1.2e-160 fabD 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
GAMOKDAL_02669 3.7e-125 pksB 3.1.2.6 S Polyketide biosynthesis
GAMOKDAL_02670 2.2e-108 pksA K Transcriptional regulator
GAMOKDAL_02671 1.8e-96 ymcC S Membrane
GAMOKDAL_02672 2e-69 S Regulatory protein YrvL
GAMOKDAL_02673 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
GAMOKDAL_02674 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
GAMOKDAL_02675 2.2e-88 cotE S Spore coat protein
GAMOKDAL_02676 9.2e-69 ymcA 3.6.3.21 S Belongs to the UPF0342 family
GAMOKDAL_02677 1.7e-295 miaB 2.8.4.3 J Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
GAMOKDAL_02678 1.2e-216 kbl 2.3.1.29, 2.3.1.47 H Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
GAMOKDAL_02679 4.3e-197 tdh 1.1.1.103 C Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate
GAMOKDAL_02680 1.2e-36 spoVS S Stage V sporulation protein S
GAMOKDAL_02681 1.9e-152 ymdB S protein conserved in bacteria
GAMOKDAL_02682 2.1e-224 rny S Endoribonuclease that initiates mRNA decay
GAMOKDAL_02683 9.1e-212 pbpX V Beta-lactamase
GAMOKDAL_02684 8.1e-188 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GAMOKDAL_02685 2.1e-235 cinA 3.5.1.42 S Belongs to the CinA family
GAMOKDAL_02686 2.5e-101 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GAMOKDAL_02687 1.9e-124 ymfM S protein conserved in bacteria
GAMOKDAL_02688 2.7e-143 ymfK S Protein of unknown function (DUF3388)
GAMOKDAL_02689 4.8e-41 ymfJ S Protein of unknown function (DUF3243)
GAMOKDAL_02690 1.7e-128 ymfI 1.1.1.100, 1.3.1.28 S Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
GAMOKDAL_02691 2.4e-242 ymfH S zinc protease
GAMOKDAL_02692 2.7e-233 ymfF S Peptidase M16
GAMOKDAL_02693 3.8e-205 ymfD EGP Major facilitator Superfamily
GAMOKDAL_02694 1.4e-133 ymfC K Transcriptional regulator
GAMOKDAL_02695 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
GAMOKDAL_02696 4.4e-32 S YlzJ-like protein
GAMOKDAL_02697 5.3e-133 tepA 3.4.21.92 OU COG0740 Protease subunit of ATP-dependent Clp proteases
GAMOKDAL_02698 1.9e-308 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GAMOKDAL_02699 5.2e-156 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GAMOKDAL_02700 1.7e-221 dapG 1.1.1.3, 2.7.2.4 E Belongs to the aspartokinase family
GAMOKDAL_02701 1.9e-192 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GAMOKDAL_02702 2.2e-108 spoVFB H Together with DpaA, catalyzes the conversion of dihydrodipicolinate to dipicolinate (DPA)
GAMOKDAL_02703 1.1e-161 spoVFA 1.1.1.29, 1.1.1.399, 1.1.1.95 CH Dipicolinate synthase subunit A
GAMOKDAL_02704 2.6e-42 ymxH S YlmC YmxH family
GAMOKDAL_02705 2.2e-232 pepR S Belongs to the peptidase M16 family
GAMOKDAL_02706 2.6e-180 ylxY 3.5.1.104 G Sporulation protein, polysaccharide deacetylase
GAMOKDAL_02707 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
GAMOKDAL_02708 6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GAMOKDAL_02709 6.7e-181 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
GAMOKDAL_02710 4.3e-172 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GAMOKDAL_02711 5e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GAMOKDAL_02712 3.9e-44 ylxP S protein conserved in bacteria
GAMOKDAL_02713 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GAMOKDAL_02714 3.1e-47 ylxQ J ribosomal protein
GAMOKDAL_02715 3.4e-32 ylxR K nucleic-acid-binding protein implicated in transcription termination
GAMOKDAL_02716 1.1e-203 nusA K Participates in both transcription termination and antitermination
GAMOKDAL_02717 3.3e-80 rimP S Required for maturation of 30S ribosomal subunits
GAMOKDAL_02718 1.3e-51 spaC2 V PFAM Lanthionine synthetase
GAMOKDAL_02719 6.9e-102 spaT V ABC transporter
GAMOKDAL_02720 4.7e-138 spaB S Lantibiotic dehydratase, C terminus
GAMOKDAL_02722 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GAMOKDAL_02723 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
GAMOKDAL_02724 1e-224 rasP M zinc metalloprotease
GAMOKDAL_02725 4.6e-216 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
GAMOKDAL_02726 7.7e-138 cdsA 2.7.7.41 S Belongs to the CDS family
GAMOKDAL_02727 8.3e-145 uppS 2.5.1.31 I Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GAMOKDAL_02728 6.4e-91 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
GAMOKDAL_02729 2.7e-126 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
GAMOKDAL_02730 6.3e-157 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GAMOKDAL_02731 1e-131 rpsB J Belongs to the universal ribosomal protein uS2 family
GAMOKDAL_02732 4.8e-77 ylxL
GAMOKDAL_02733 5.6e-138 sigD K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
GAMOKDAL_02734 1.1e-86 cheD 3.5.1.44 NT Deamidates glutamine residues to glutamate on methyl- accepting chemotaxis receptors (MCPs). CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the CheA kinase
GAMOKDAL_02735 1.3e-111 cheC NT COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation
GAMOKDAL_02736 2.8e-79 cheW NT COG0835 Chemotaxis signal transduction protein
GAMOKDAL_02737 0.0 cheA 2.7.13.3 NT COG0643 Chemotaxis protein histidine kinase and related kinases
GAMOKDAL_02738 5.8e-197 cheB 3.1.1.61, 3.5.1.44 NT catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
GAMOKDAL_02739 2.8e-157 flhG D Belongs to the ParA family
GAMOKDAL_02740 5.2e-201 flhF N Flagellar biosynthesis regulator FlhF
GAMOKDAL_02741 0.0 flhA N Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
GAMOKDAL_02742 1.4e-190 flhB N Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
GAMOKDAL_02743 3.6e-132 fliR N Flagellar biosynthetic protein FliR
GAMOKDAL_02744 2.2e-36 fliQ N Role in flagellar biosynthesis
GAMOKDAL_02745 1.6e-109 fliP N Plays a role in the flagellum-specific transport system
GAMOKDAL_02746 6e-96 fliZ N Flagellar biosynthesis protein, FliO
GAMOKDAL_02747 6.1e-58 cheB 3.1.1.61, 3.5.1.44 T response regulator
GAMOKDAL_02748 5.9e-184 fliN N FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
GAMOKDAL_02749 1.9e-181 fliM N One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
GAMOKDAL_02750 4.6e-49 fliL N Controls the rotational direction of flagella during chemotaxis
GAMOKDAL_02751 8.2e-140 flgG N Flagellar basal body rod
GAMOKDAL_02752 1.7e-72 flgD N Flagellar basal body rod modification protein
GAMOKDAL_02753 2.5e-195 fliK N Flagellar hook-length control protein
GAMOKDAL_02754 5.5e-35 ylxF S MgtE intracellular N domain
GAMOKDAL_02755 1.5e-69 fliJ N Flagellar biosynthesis chaperone
GAMOKDAL_02756 3.6e-241 fliI 3.6.3.14 NU COG1157 Flagellar biosynthesis type III secretory pathway ATPase
GAMOKDAL_02757 2.2e-105 fliH NU COG1317 Flagellar biosynthesis type III secretory pathway protein
GAMOKDAL_02758 2e-178 fliG N One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
GAMOKDAL_02759 7e-255 fliF N The M ring may be actively involved in energy transduction
GAMOKDAL_02760 1.9e-31 fliE N Flagellar hook-basal body
GAMOKDAL_02761 3.4e-74 flgC N Belongs to the flagella basal body rod proteins family
GAMOKDAL_02762 2.3e-63 flgB N Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body
GAMOKDAL_02763 9.2e-136 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
GAMOKDAL_02764 8.5e-241 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
GAMOKDAL_02765 4.4e-92 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
GAMOKDAL_02766 2.5e-169 xerC L tyrosine recombinase XerC
GAMOKDAL_02767 1.6e-246 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
GAMOKDAL_02768 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GAMOKDAL_02769 4.7e-168 dprA LU Rossmann fold nucleotide-binding protein involved in DNA uptake
GAMOKDAL_02770 3.1e-167 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
GAMOKDAL_02771 3.4e-211 sucC 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
GAMOKDAL_02772 3e-44 ylqH S homolog of the cytoplasmic domain of flagellar protein FhlB
GAMOKDAL_02773 1.8e-288 ylqG
GAMOKDAL_02774 1e-134 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GAMOKDAL_02775 7.9e-157 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
GAMOKDAL_02776 1.4e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
GAMOKDAL_02777 9.2e-138 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
GAMOKDAL_02778 7.6e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GAMOKDAL_02779 6.3e-61 ylqD S YlqD protein
GAMOKDAL_02780 3.8e-35 ylqC S Belongs to the UPF0109 family
GAMOKDAL_02781 1.1e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
GAMOKDAL_02782 3e-235 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GAMOKDAL_02783 1.6e-49 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
GAMOKDAL_02784 6.4e-87
GAMOKDAL_02785 8.8e-176 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
GAMOKDAL_02786 0.0 smc D Required for chromosome condensation and partitioning
GAMOKDAL_02787 1.2e-135 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
GAMOKDAL_02788 2.8e-32 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
GAMOKDAL_02789 6.1e-129 IQ reductase
GAMOKDAL_02790 2.9e-168 fabD 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
GAMOKDAL_02791 4.3e-178 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
GAMOKDAL_02792 4e-80 fapR 5.3.1.23 K Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism
GAMOKDAL_02793 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
GAMOKDAL_02794 9.3e-156 sdaAA 4.3.1.17 E L-serine dehydratase
GAMOKDAL_02795 9.6e-118 sdaAB 4.3.1.17 E L-serine dehydratase
GAMOKDAL_02796 2.3e-301 yloV S kinase related to dihydroxyacetone kinase
GAMOKDAL_02797 5.5e-59 asp S protein conserved in bacteria
GAMOKDAL_02798 4.2e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
GAMOKDAL_02799 6.9e-121 thiN 2.7.6.2 H thiamine pyrophosphokinase
GAMOKDAL_02800 4.2e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
GAMOKDAL_02801 7.3e-169 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
GAMOKDAL_02802 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
GAMOKDAL_02803 7.9e-140 stp 3.1.3.16 T phosphatase
GAMOKDAL_02804 9e-206 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
GAMOKDAL_02805 6e-252 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
GAMOKDAL_02806 9.4e-175 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GAMOKDAL_02807 6.6e-84 def 2.1.2.9, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GAMOKDAL_02808 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GAMOKDAL_02809 7e-223 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GAMOKDAL_02810 2.2e-28 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
GAMOKDAL_02811 3.1e-110 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
GAMOKDAL_02812 1.5e-40 ylzA S Belongs to the UPF0296 family
GAMOKDAL_02813 2.4e-156 yloC S stress-induced protein
GAMOKDAL_02814 0.0 yloB 3.6.3.8 P COG0474 Cation transport ATPase
GAMOKDAL_02815 0.0 FbpA K RNA-binding protein homologous to eukaryotic snRNP
GAMOKDAL_02816 1.6e-82 cysG 1.3.1.76, 4.99.1.4 H Siroheme synthase
GAMOKDAL_02817 1.4e-144 cbiX 4.99.1.3, 4.99.1.4, 5.4.99.60, 5.4.99.61 S Sirohydrochlorin ferrochelatase
GAMOKDAL_02818 4.1e-144 hemD 2.1.1.107, 4.2.1.75 H Belongs to the precorrin methyltransferase family
GAMOKDAL_02819 1.6e-108 cysC 2.7.1.25 P Catalyzes the synthesis of activated sulfate
GAMOKDAL_02820 1.3e-223 sat 2.7.7.4 P Belongs to the sulfate adenylyltransferase family
GAMOKDAL_02821 1.8e-179 cysP P phosphate transporter
GAMOKDAL_02822 2.2e-141 cysH 1.8.4.10, 1.8.4.8, 2.7.1.25 EH Belongs to the PAPS reductase family. CysH subfamily
GAMOKDAL_02824 7.3e-115 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GAMOKDAL_02825 8e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
GAMOKDAL_02826 1e-173 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
GAMOKDAL_02827 6.5e-142 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
GAMOKDAL_02828 0.0 carB 6.3.5.5 F Belongs to the CarB family
GAMOKDAL_02829 5e-212 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
GAMOKDAL_02830 1.4e-250 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
GAMOKDAL_02831 3.4e-166 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
GAMOKDAL_02832 5.4e-229 pyrP F Xanthine uracil
GAMOKDAL_02833 2.7e-94 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GAMOKDAL_02834 4.2e-164 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GAMOKDAL_02835 1.8e-78 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GAMOKDAL_02836 8.5e-63 dksA T COG1734 DnaK suppressor protein
GAMOKDAL_02837 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GAMOKDAL_02838 2.6e-67 divIVA D Cell division initiation protein
GAMOKDAL_02839 2e-138 ylmH 5.4.99.23, 5.4.99.24 S conserved protein, contains S4-like domain
GAMOKDAL_02840 1.3e-39 yggT S membrane
GAMOKDAL_02841 1.4e-62 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
GAMOKDAL_02842 2.9e-125 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
GAMOKDAL_02843 2e-157 yfiH S Belongs to the multicopper oxidase YfiH RL5 family
GAMOKDAL_02844 2.4e-37 ylmC S sporulation protein
GAMOKDAL_02845 1e-253 argE 3.5.1.16 E Acetylornithine deacetylase
GAMOKDAL_02846 2.4e-147 modF 3.6.3.21, 3.6.3.34 P COG1119 ABC-type molybdenum transport system, ATPase component photorepair protein PhrA
GAMOKDAL_02847 3.6e-140 sigG K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
GAMOKDAL_02848 1.4e-125 sigE K sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
GAMOKDAL_02849 1.7e-171 spoIIGA M aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR
GAMOKDAL_02850 0.0 bpr O COG1404 Subtilisin-like serine proteases
GAMOKDAL_02851 2e-203 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GAMOKDAL_02852 7e-229 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
GAMOKDAL_02853 6.2e-58 sbp S small basic protein
GAMOKDAL_02854 1.8e-91 ylxX S protein conserved in bacteria
GAMOKDAL_02855 2.4e-103 ylxW S protein conserved in bacteria
GAMOKDAL_02856 2.6e-138 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
GAMOKDAL_02857 5.3e-167 murB 1.3.1.98 M cell wall formation
GAMOKDAL_02858 6.7e-201 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GAMOKDAL_02859 5.7e-186 spoVE D Belongs to the SEDS family
GAMOKDAL_02860 2.6e-255 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GAMOKDAL_02861 5.5e-170 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GAMOKDAL_02862 5.8e-280 murE 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GAMOKDAL_02863 0.0 ftsI 3.4.16.4 M stage V sporulation protein D
GAMOKDAL_02864 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
GAMOKDAL_02865 3.7e-44 ftsL D Essential cell division protein
GAMOKDAL_02866 1.6e-171 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
GAMOKDAL_02867 2.9e-78 mraZ K Belongs to the MraZ family
GAMOKDAL_02868 1.5e-305 bshC S Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
GAMOKDAL_02869 7.3e-169 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GAMOKDAL_02870 1.5e-88 ylbP K n-acetyltransferase
GAMOKDAL_02871 3.4e-74 ylbO S SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
GAMOKDAL_02872 1.2e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
GAMOKDAL_02873 3e-90 yceD S metal-binding, possibly nucleic acid-binding protein
GAMOKDAL_02875 3.3e-228 ylbM S Belongs to the UPF0348 family
GAMOKDAL_02876 6.8e-187 ylbL T Belongs to the peptidase S16 family
GAMOKDAL_02877 1.3e-137 ylbK S esterase of the alpha-beta hydrolase superfamily
GAMOKDAL_02878 3.6e-219 ylbJ S Sporulation integral membrane protein YlbJ
GAMOKDAL_02879 3.9e-84 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GAMOKDAL_02880 5.4e-98 rsmD 2.1.1.171 L Methyltransferase
GAMOKDAL_02881 7.5e-39 ylbG S UPF0298 protein
GAMOKDAL_02882 1.8e-75 ylbF S Belongs to the UPF0342 family
GAMOKDAL_02883 6.7e-37 ylbE S YlbE-like protein
GAMOKDAL_02884 4.1e-63 ylbD S Putative coat protein
GAMOKDAL_02885 9.6e-200 ylbC S protein with SCP PR1 domains
GAMOKDAL_02886 2.6e-74 ylbB T COG0517 FOG CBS domain
GAMOKDAL_02887 7e-62 ylbA S YugN-like family
GAMOKDAL_02888 1.5e-166 ctaG S cytochrome c oxidase
GAMOKDAL_02889 4.2e-53 ctaF 1.10.3.12, 1.9.3.1 C COG3125 Heme copper-type cytochrome quinol oxidase, subunit 4
GAMOKDAL_02890 3.3e-112 cyoC 1.10.3.12, 1.9.3.1 C COG1845 Heme copper-type cytochrome quinol oxidase, subunit 3
GAMOKDAL_02891 0.0 ctaD 1.10.3.12, 1.9.3.1 C Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
GAMOKDAL_02892 1.8e-190 ctaC 1.9.3.1 C Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)
GAMOKDAL_02893 3.2e-164 ctaB 2.5.1.141 O Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
GAMOKDAL_02894 8.5e-165 ctaA 2.5.1.141 O Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group
GAMOKDAL_02895 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
GAMOKDAL_02896 2.5e-212 ftsW D Belongs to the SEDS family
GAMOKDAL_02897 8.7e-44 ylaN S Belongs to the UPF0358 family
GAMOKDAL_02898 3.1e-170 glsA 3.5.1.2 E Belongs to the glutaminase family
GAMOKDAL_02899 2.7e-85 ylaL S Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
GAMOKDAL_02900 8e-249 phoH T ATPase related to phosphate starvation-inducible protein PhoH
GAMOKDAL_02901 4.4e-88 ylaJ S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
GAMOKDAL_02902 2.5e-32 ylaI S protein conserved in bacteria
GAMOKDAL_02903 5.6e-47 ylaH S YlaH-like protein
GAMOKDAL_02904 0.0 typA T GTP-binding protein TypA
GAMOKDAL_02905 8.2e-22 S Family of unknown function (DUF5325)
GAMOKDAL_02906 2.6e-37 ylaE
GAMOKDAL_02907 1.2e-11 sigC S Putative zinc-finger
GAMOKDAL_02908 8.7e-66 ylaC K Belongs to the sigma-70 factor family. ECF subfamily
GAMOKDAL_02909 3e-41 ylaB
GAMOKDAL_02910 0.0 ylaA
GAMOKDAL_02911 2.2e-293 mpl 3.4.24.28, 3.4.24.29 E Peptidase M4
GAMOKDAL_02912 1e-170 Q Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
GAMOKDAL_02913 4.2e-75 ykzC S Acetyltransferase (GNAT) family
GAMOKDAL_02914 1.7e-148 suhB 3.1.3.25 G Inositol monophosphatase
GAMOKDAL_02915 7.1e-26 ykzI
GAMOKDAL_02916 4.6e-117 yktB S Belongs to the UPF0637 family
GAMOKDAL_02917 1.7e-41 yktA S Belongs to the UPF0223 family
GAMOKDAL_02918 1e-276 speA 4.1.1.19 E Arginine
GAMOKDAL_02919 1.3e-63 slp CO COG0526, thiol-disulfide isomerase and thioredoxins
GAMOKDAL_02920 4.1e-243 lpdA 1.8.1.4 C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
GAMOKDAL_02921 9.9e-231 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
GAMOKDAL_02922 1.1e-178 pdhB 1.2.4.1 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
GAMOKDAL_02923 9.9e-192 pdhA 1.2.4.1, 1.2.4.4 C COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
GAMOKDAL_02924 1.1e-107 recN L Putative cell-wall binding lipoprotein
GAMOKDAL_02926 4e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GAMOKDAL_02927 2.1e-146 ykrA S hydrolases of the HAD superfamily
GAMOKDAL_02928 8.2e-31 ykzG S Belongs to the UPF0356 family
GAMOKDAL_02929 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GAMOKDAL_02930 0.0 ade 3.5.4.2 F Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
GAMOKDAL_02931 4e-116 ktrA P COG0569 K transport systems, NAD-binding component
GAMOKDAL_02932 5.5e-155 ykqA P Gamma-glutamyl cyclotransferase, AIG2-like
GAMOKDAL_02933 1e-240 kinC 2.7.13.3 T COG0642 Signal transduction histidine kinase
GAMOKDAL_02934 1.5e-43 abrB K of stationary sporulation gene expression
GAMOKDAL_02935 7.7e-183 mreB D Rod-share determining protein MreBH
GAMOKDAL_02936 1.1e-12 S Uncharacterized protein YkpC
GAMOKDAL_02937 1.3e-237 ampS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
GAMOKDAL_02938 9e-167 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GAMOKDAL_02939 5.8e-310 ybiT S COG0488 ATPase components of ABC transporters with duplicated ATPase domains
GAMOKDAL_02940 8.1e-39 ykoA
GAMOKDAL_02941 4.8e-105 sipT 3.4.21.89 U Belongs to the peptidase S26 family
GAMOKDAL_02942 0.0 fruA 2.7.1.202 GT COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type)
GAMOKDAL_02943 5.3e-167 fruK 2.7.1.11, 2.7.1.56 G Belongs to the carbohydrate kinase PfkB family
GAMOKDAL_02944 3.1e-136 fruR K Transcriptional regulator
GAMOKDAL_02945 4e-207 yknZ V COG0577 ABC-type antimicrobial peptide transport system, permease component
GAMOKDAL_02946 7.2e-124 macB V ABC transporter, ATP-binding protein
GAMOKDAL_02947 3.3e-158 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GAMOKDAL_02948 9.4e-116 yknW S Yip1 domain
GAMOKDAL_02949 0.0 yknV V COG1132 ABC-type multidrug transport system, ATPase and permease components
GAMOKDAL_02950 0.0 yknU V COG1132 ABC-type multidrug transport system, ATPase and permease components
GAMOKDAL_02951 2.4e-31 moaD 2.8.1.12 H Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
GAMOKDAL_02952 4.2e-83 moaE 2.8.1.12 H COG0314 Molybdopterin converting factor, large subunit
GAMOKDAL_02953 9.9e-94 mobB 2.10.1.1, 2.7.7.77 H molybdopterin-guanine dinucleotide biosynthesis protein
GAMOKDAL_02954 2.6e-244 moeA 2.10.1.1 H molybdopterin
GAMOKDAL_02955 5.3e-192 moeB 2.7.7.73, 2.7.7.80 H COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
GAMOKDAL_02956 3.3e-109 mobA 2.7.7.77 H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
GAMOKDAL_02957 4.6e-145 yknT
GAMOKDAL_02958 1.5e-93 rok K Repressor of ComK
GAMOKDAL_02959 1.8e-80 ykuV CO thiol-disulfide
GAMOKDAL_02960 3.9e-101 ykuU O Alkyl hydroperoxide reductase
GAMOKDAL_02961 8.8e-142 ykuT M Mechanosensitive ion channel
GAMOKDAL_02962 9e-37 ykuS S Belongs to the UPF0180 family
GAMOKDAL_02963 2.1e-213 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
GAMOKDAL_02964 1.1e-74 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
GAMOKDAL_02965 3.9e-78 fld C Flavodoxin
GAMOKDAL_02966 2.2e-173 ykuO
GAMOKDAL_02967 5.9e-85 fld C Flavodoxin domain
GAMOKDAL_02968 3.5e-168 ccpC K Transcriptional regulator
GAMOKDAL_02969 1.6e-76 ykuL S CBS domain
GAMOKDAL_02970 3.9e-27 ykzF S Antirepressor AbbA
GAMOKDAL_02971 4.4e-94 ykuK S Ribonuclease H-like
GAMOKDAL_02972 3.9e-37 ykuJ S protein conserved in bacteria
GAMOKDAL_02973 4.4e-233 ykuI T Diguanylate phosphodiesterase
GAMOKDAL_02974 1.1e-141 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
GAMOKDAL_02975 1.4e-164 ykuE S Metallophosphoesterase
GAMOKDAL_02976 1.8e-87 ykuD S protein conserved in bacteria
GAMOKDAL_02977 2.8e-238 ykuC EGP Major facilitator Superfamily
GAMOKDAL_02978 1.7e-84 ykyB S YkyB-like protein
GAMOKDAL_02979 6.2e-168 cheV 2.7.13.3 T Chemotaxis protein CheV
GAMOKDAL_02980 1.3e-15
GAMOKDAL_02981 4.4e-222 patA 2.6.1.1 E Aminotransferase
GAMOKDAL_02982 0.0 pilS 2.7.13.3 T Histidine kinase
GAMOKDAL_02983 0.0 mrdA 3.4.16.4 M Penicillin-binding Protein
GAMOKDAL_02984 7e-120 ykwD J protein with SCP PR1 domains
GAMOKDAL_02985 4.6e-14 vgb H Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid
GAMOKDAL_02986 8.6e-159 glxR 1.1.1.31, 1.1.1.60 I COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
GAMOKDAL_02987 1.3e-258 mcpC NT chemotaxis protein
GAMOKDAL_02988 1.7e-125 ykwB 2.3.1.1 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
GAMOKDAL_02989 1.3e-201 splB 4.1.99.14 L Spore photoproduct lyase
GAMOKDAL_02990 7.2e-39 splA S Transcriptional regulator
GAMOKDAL_02991 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GAMOKDAL_02992 2.1e-39 ptsH G phosphocarrier protein HPr
GAMOKDAL_02993 0.0 ptsG 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
GAMOKDAL_02994 7.6e-128 glcT K antiterminator
GAMOKDAL_02996 1.4e-178 ykvZ 5.1.1.1 K Transcriptional regulator
GAMOKDAL_02998 1.3e-207 pepQ 3.4.13.9 E COG0006 Xaa-Pro aminopeptidase
GAMOKDAL_02999 2.3e-09
GAMOKDAL_03000 0.0 cadA 3.6.3.3, 3.6.3.5 P COG2217 Cation transport ATPase
GAMOKDAL_03001 9.2e-89 stoA CO thiol-disulfide
GAMOKDAL_03002 2.9e-238 ykvU S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
GAMOKDAL_03003 3.1e-102 ykvT 3.5.1.28 M Cell Wall Hydrolase
GAMOKDAL_03004 2.8e-28
GAMOKDAL_03005 6e-25 ykvS S protein conserved in bacteria
GAMOKDAL_03006 5.6e-46 ykvR S Protein of unknown function (DUF3219)
GAMOKDAL_03007 9e-162 G Glycosyl hydrolases family 18
GAMOKDAL_03008 3.5e-35 3.5.1.104 M LysM domain
GAMOKDAL_03009 2.1e-213 ykvP 3.5.1.28 M Glycosyl transferases group 1
GAMOKDAL_03010 2.4e-133 IQ Enoyl-(Acyl carrier protein) reductase
GAMOKDAL_03011 2.4e-59 ykvN K HxlR-like helix-turn-helix
GAMOKDAL_03012 2e-96 queF 1.7.1.13 S Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
GAMOKDAL_03013 1.3e-139 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
GAMOKDAL_03014 2.8e-81 queD 4.1.2.50, 4.2.3.12 H synthase
GAMOKDAL_03015 2.1e-125 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
GAMOKDAL_03016 9e-179 ykvI S membrane
GAMOKDAL_03017 0.0 clpE O Belongs to the ClpA ClpB family
GAMOKDAL_03018 2.7e-138 motA N flagellar motor
GAMOKDAL_03019 2.5e-125 motB N Flagellar motor protein
GAMOKDAL_03020 1.3e-75 ykvE K transcriptional
GAMOKDAL_03021 1.6e-274 kinD 2.7.13.3 T COG0642 Signal transduction histidine kinase
GAMOKDAL_03022 1.4e-64 eag
GAMOKDAL_03023 6.4e-09 S Spo0E like sporulation regulatory protein
GAMOKDAL_03024 1.3e-51 XK27_09985 S Protein of unknown function (DUF1232)
GAMOKDAL_03025 2.9e-96 mtnD 1.13.11.53, 1.13.11.54 S Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
GAMOKDAL_03026 1.6e-114 mtnB 3.1.3.87, 4.1.2.17, 4.2.1.109, 5.1.3.4 E Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P)
GAMOKDAL_03027 8.3e-136 mtnX 3.1.3.87, 4.2.1.109 E Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
GAMOKDAL_03028 4.1e-231 mtnW 5.3.2.5 G Catalyzes the enolization of 2,3-diketo-5- methylthiopentyl-1-phosphate (DK-MTP-1-P) into 2-hydroxy-3-keto-5- methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P)
GAMOKDAL_03029 9.8e-230 mtnE 2.6.1.83 E Aminotransferase
GAMOKDAL_03030 3.5e-151 mtnU 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
GAMOKDAL_03031 1.8e-228 mtnK 2.7.1.100 F Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
GAMOKDAL_03032 7.5e-197 mtnA 5.3.1.23 E Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
GAMOKDAL_03034 4.6e-88 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
GAMOKDAL_03035 0.0 kinE 2.7.13.3 T Histidine kinase
GAMOKDAL_03036 6.5e-190 ykrP G COG3594 Fucose 4-O-acetylase and related acetyltransferases
GAMOKDAL_03037 4.1e-18 ykzE
GAMOKDAL_03038 1.2e-10 ydfR S Protein of unknown function (DUF421)
GAMOKDAL_03039 1.1e-232 ktrB P COG0168 Trk-type K transport systems, membrane components
GAMOKDAL_03040 3.5e-155 htpX O Belongs to the peptidase M48B family
GAMOKDAL_03041 3.3e-124 ykrK S Domain of unknown function (DUF1836)
GAMOKDAL_03042 1.9e-26 sspD S small acid-soluble spore protein
GAMOKDAL_03043 7.7e-107 rsgI S Anti-sigma factor N-terminus
GAMOKDAL_03044 9.5e-130 sigI K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
GAMOKDAL_03045 2.1e-177 ykoY P COG0861 Membrane protein TerC, possibly involved in tellurium resistance
GAMOKDAL_03046 2.7e-109 ykoX S membrane-associated protein
GAMOKDAL_03047 0.0 ydcR 2.7.7.65 T Diguanylate cyclase
GAMOKDAL_03048 3.6e-160 ku L With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
GAMOKDAL_03049 0.0 ligD 6.5.1.1 L ATP-dependent DNA ligase
GAMOKDAL_03050 2.1e-185 ykoT GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
GAMOKDAL_03051 0.0 ykoS
GAMOKDAL_03052 3.5e-154 ykoQ S Calcineurin-like phosphoesterase superfamily domain
GAMOKDAL_03053 2.7e-97 ykoP G polysaccharide deacetylase
GAMOKDAL_03054 4e-217 ugtP 2.4.1.315 GT28 M COG0707 UDP-N-acetylglucosamine LPS N-acetylglucosamine transferase
GAMOKDAL_03055 1.3e-81 mhqR K transcriptional
GAMOKDAL_03056 2.6e-25 ykoL
GAMOKDAL_03057 5.9e-18
GAMOKDAL_03058 1.4e-53 tnrA K transcriptional
GAMOKDAL_03059 2.2e-222 mgtE P Acts as a magnesium transporter
GAMOKDAL_03062 2.2e-85 ykoJ S Peptidase propeptide and YPEB domain
GAMOKDAL_03063 1.8e-111 ykoI S Peptidase propeptide and YPEB domain
GAMOKDAL_03064 2.2e-241 ykoH 2.7.13.3 T Histidine kinase
GAMOKDAL_03065 1.6e-123 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
GAMOKDAL_03066 2.5e-109 ykoF S YKOF-related Family
GAMOKDAL_03067 6.9e-99 ykoE S ABC-type cobalt transport system, permease component
GAMOKDAL_03068 9.5e-308 P ABC transporter, ATP-binding protein
GAMOKDAL_03069 2.6e-135 ykoC P Cobalt transport protein
GAMOKDAL_03070 6.3e-151 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
GAMOKDAL_03071 1.7e-176 isp O Belongs to the peptidase S8 family
GAMOKDAL_03072 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GAMOKDAL_03073 1.4e-86 guaD 3.5.4.12, 3.5.4.3, 3.5.4.33 FJ COG0590 Cytosine adenosine deaminases
GAMOKDAL_03074 8.4e-72 ohrB O Organic hydroperoxide resistance protein
GAMOKDAL_03075 4.4e-74 ohrR K COG1846 Transcriptional regulators
GAMOKDAL_03076 3.7e-70 ohrA O Organic hydroperoxide resistance protein
GAMOKDAL_03077 6.9e-226 proA 1.2.1.41, 1.2.1.81 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
GAMOKDAL_03078 2e-200 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
GAMOKDAL_03079 1.1e-169 purU 2.7.7.72, 3.5.1.10 F Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4)
GAMOKDAL_03080 7e-50 ykkD P Multidrug resistance protein
GAMOKDAL_03081 3.5e-55 ykkC P Multidrug resistance protein
GAMOKDAL_03082 1.1e-97 ykkB 2.3.1.128 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
GAMOKDAL_03083 8.8e-98 ykkA S Protein of unknown function (DUF664)
GAMOKDAL_03084 2.7e-129 ykjA S Protein of unknown function (DUF421)
GAMOKDAL_03085 1e-10
GAMOKDAL_03086 3.9e-226 hmp 1.14.12.17 C Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
GAMOKDAL_03087 3.4e-92 ykhA 3.1.2.20 I Acyl-CoA hydrolase
GAMOKDAL_03088 2.7e-160 ykgA E Amidinotransferase
GAMOKDAL_03089 1.8e-203 pgl 3.1.1.31 G 6-phosphogluconolactonase
GAMOKDAL_03090 7.2e-186 ykfD E Belongs to the ABC transporter superfamily
GAMOKDAL_03091 1.8e-164 ykfC 3.4.14.13 M COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
GAMOKDAL_03092 1.8e-198 ykfB 5.1.1.20 M Belongs to the mandelate racemase muconate lactonizing enzyme family
GAMOKDAL_03093 3.5e-174 ykfA 3.4.17.13 V proteins, homologs of microcin C7 resistance protein MccF
GAMOKDAL_03095 0.0 dppE E ABC transporter substrate-binding protein
GAMOKDAL_03096 5.6e-186 dppD P Belongs to the ABC transporter superfamily
GAMOKDAL_03097 3.3e-175 dppC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
GAMOKDAL_03098 1.1e-159 dppB P COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
GAMOKDAL_03099 5.1e-153 dppA E D-aminopeptidase
GAMOKDAL_03100 6.9e-134 proG 1.5.1.2 E Pyrroline-5-carboxylate reductase
GAMOKDAL_03101 2.2e-209 htrA 3.4.21.107 O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GAMOKDAL_03102 8.4e-179 ykcC GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
GAMOKDAL_03103 0.0 ykcB M COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
GAMOKDAL_03105 6.1e-182 mhqA E COG0346 Lactoylglutathione lyase and related lyases
GAMOKDAL_03106 6.1e-241 steT E amino acid
GAMOKDAL_03107 6.9e-110 ykaA P COG1392 Phosphate transport regulator (distant homolog of PhoU)
GAMOKDAL_03108 5.8e-175 pit P phosphate transporter
GAMOKDAL_03109 1.8e-136 spoIISA S Toxin SpoIISA, type II toxin-antitoxin system
GAMOKDAL_03110 6.7e-23 spoIISB S Stage II sporulation protein SB
GAMOKDAL_03111 1.3e-162 xlyA 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
GAMOKDAL_03112 9.3e-40 xhlB S SPP1 phage holin
GAMOKDAL_03113 2.8e-39 xhlA S Haemolysin XhlA
GAMOKDAL_03114 2.8e-154 xepA
GAMOKDAL_03115 2.1e-21 xkdX
GAMOKDAL_03116 1.5e-42 xkdW S XkdW protein
GAMOKDAL_03117 0.0
GAMOKDAL_03118 8.7e-41
GAMOKDAL_03119 5.8e-103 xkdU S Uncharacterised protein conserved in bacteria (DUF2313)
GAMOKDAL_03120 3.9e-190 xkdT S Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
GAMOKDAL_03121 4.1e-69 xkdS S Protein of unknown function (DUF2634)
GAMOKDAL_03122 2.1e-39 xkdR S Protein of unknown function (DUF2577)
GAMOKDAL_03123 4.8e-182 yqbQ 3.2.1.96 G NLP P60 protein
GAMOKDAL_03124 3.7e-122 xkdP S Lysin motif
GAMOKDAL_03125 0.0 xkdO L Transglycosylase SLT domain
GAMOKDAL_03126 1.9e-77 S Phage XkdN-like tail assembly chaperone protein, TAC
GAMOKDAL_03127 6.1e-76 xkdM S Phage tail tube protein
GAMOKDAL_03128 2.5e-256 xkdK S Phage tail sheath C-terminal domain
GAMOKDAL_03129 1.9e-77 xkdJ
GAMOKDAL_03130 2.9e-87 xkdI S Bacteriophage HK97-gp10, putative tail-component
GAMOKDAL_03131 2.5e-64 yqbH S Domain of unknown function (DUF3599)
GAMOKDAL_03132 5.1e-63 yqbG S Protein of unknown function (DUF3199)
GAMOKDAL_03133 5.8e-169 xkdG S Phage capsid family
GAMOKDAL_03134 2e-133 yqbD 2.1.1.72 L Putative phage serine protease XkdF
GAMOKDAL_03135 1.6e-285 yqbA S portal protein
GAMOKDAL_03136 1.8e-253 xtmB S phage terminase, large subunit
GAMOKDAL_03137 1.5e-138 xtmA L phage terminase small subunit
GAMOKDAL_03138 7e-84 xpf K COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
GAMOKDAL_03139 2.3e-09 yqaO S Phage-like element PBSX protein XtrA
GAMOKDAL_03142 4.1e-118 xkdC L Bacterial dnaA protein
GAMOKDAL_03143 5.9e-157 xkdB K sequence-specific DNA binding
GAMOKDAL_03145 3.2e-56 xre K Helix-turn-helix XRE-family like proteins
GAMOKDAL_03146 1.6e-111 xkdA E IrrE N-terminal-like domain
GAMOKDAL_03147 4.4e-160 ydbD P Catalase
GAMOKDAL_03148 3.3e-109 yjqB S Pfam:DUF867
GAMOKDAL_03149 2.3e-60 yjqA S Bacterial PH domain
GAMOKDAL_03150 7.2e-167 xlyA 3.5.1.28 CBM50 M N-acetylmuramoyl-L-alanine amidase
GAMOKDAL_03151 6.3e-41 S YCII-related domain
GAMOKDAL_03153 1e-212 S response regulator aspartate phosphatase
GAMOKDAL_03154 3.6e-246 ftsH2 3.4.21.53 O AAA domain (dynein-related subfamily)
GAMOKDAL_03155 1.4e-78 yjoA S DinB family
GAMOKDAL_03156 9.7e-130 MA20_18170 S membrane transporter protein
GAMOKDAL_03157 2.5e-283 uxaA 4.2.1.7, 4.4.1.24 G Altronate
GAMOKDAL_03158 2.1e-282 uxaB 1.1.1.17, 1.1.1.58 G tagaturonate reductase activity
GAMOKDAL_03159 2.6e-183 exuR K transcriptional
GAMOKDAL_03160 8.3e-227 exuT G Sugar (and other) transporter
GAMOKDAL_03161 2e-152 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
GAMOKDAL_03162 1.1e-106 uxuA 4.2.1.8 G Catalyzes the dehydration of D-mannonate
GAMOKDAL_03163 7.5e-97 uxuA 4.2.1.8 G Catalyzes the dehydration of D-mannonate
GAMOKDAL_03164 6.5e-190 rspB 1.1.1.380 E Alcohol dehydrogenase GroES-like domain
GAMOKDAL_03165 4.2e-189 yjmC 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
GAMOKDAL_03166 2.7e-247 yjmB G symporter YjmB
GAMOKDAL_03167 4.6e-279 uxaC 5.3.1.12 G glucuronate isomerase
GAMOKDAL_03168 2.6e-219 yjlD 1.6.99.3 C NADH dehydrogenase
GAMOKDAL_03169 7.1e-66 yjlC S Protein of unknown function (DUF1641)
GAMOKDAL_03170 1.3e-90 yjlB S Cupin domain
GAMOKDAL_03171 1.1e-175 yjlA EG Putative multidrug resistance efflux transporter
GAMOKDAL_03172 2.2e-134 pstB 3.6.3.27 P ATPases associated with a variety of cellular activities
GAMOKDAL_03173 1.9e-122 ybbM S transport system, permease component
GAMOKDAL_03174 4.6e-146 hemD 2.1.1.107, 4.2.1.75 H Uroporphyrinogen-III synthase
GAMOKDAL_03175 8.2e-30
GAMOKDAL_03176 7.7e-219 oleD GT1 CG COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
GAMOKDAL_03177 1.4e-223 yjiB 1.14.13.154, 1.14.15.8 C Cytochrome P450
GAMOKDAL_03179 1.6e-111 yjhB 3.6.1.13, 3.6.1.55 F ADP-ribose pyrophosphatase
GAMOKDAL_03180 8.7e-07 S Domain of unknown function (DUF4352)
GAMOKDAL_03181 5.7e-95 yjgD S Protein of unknown function (DUF1641)
GAMOKDAL_03182 0.0 yjgC 1.17.1.10, 1.17.1.9 C formate dehydrogenase (NAD+) activity
GAMOKDAL_03183 2e-103 yjgB S Domain of unknown function (DUF4309)
GAMOKDAL_03184 4.9e-34 T PhoQ Sensor
GAMOKDAL_03185 7.3e-36 yjfC O Predicted Zn-dependent protease (DUF2268)
GAMOKDAL_03186 2.1e-104 yjfC O Predicted Zn-dependent protease (DUF2268)
GAMOKDAL_03187 2.3e-20 yjfB S Putative motility protein
GAMOKDAL_03188 3e-81 S Protein of unknown function (DUF2690)
GAMOKDAL_03189 3.2e-264 xynD 3.5.1.104 G Polysaccharide deacetylase
GAMOKDAL_03191 3.1e-173 cyoE 2.5.1.141 O Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
GAMOKDAL_03192 2.7e-52 yjdJ S Domain of unknown function (DUF4306)
GAMOKDAL_03193 4.2e-29 S Domain of unknown function (DUF4177)
GAMOKDAL_03194 5.2e-81 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GAMOKDAL_03196 7.6e-91 yjdG 2.3.1.128 J Acetyltransferase (GNAT) domain
GAMOKDAL_03197 7e-50 yjdF S Protein of unknown function (DUF2992)
GAMOKDAL_03198 4.3e-188 manA 5.3.1.8 G mannose-6-phosphate isomerase
GAMOKDAL_03199 0.0 manP 2.7.1.191, 2.7.1.202 G phosphotransferase system
GAMOKDAL_03200 0.0 manR 2.7.1.200, 2.7.1.202 GKT transcriptional antiterminator
GAMOKDAL_03202 5.4e-141 IQ Enoyl-(Acyl carrier protein) reductase
GAMOKDAL_03203 4.2e-46 yjcS S Antibiotic biosynthesis monooxygenase
GAMOKDAL_03204 5.7e-88 S response regulator aspartate phosphatase
GAMOKDAL_03205 1.4e-22 S response regulator aspartate phosphatase
GAMOKDAL_03208 4.9e-21
GAMOKDAL_03209 3.6e-172 M nucleic acid phosphodiester bond hydrolysis
GAMOKDAL_03210 6.8e-51 M nucleic acid phosphodiester bond hydrolysis
GAMOKDAL_03211 1.4e-28
GAMOKDAL_03212 1.6e-38
GAMOKDAL_03215 2.4e-212 yjcL S Protein of unknown function (DUF819)
GAMOKDAL_03216 1.2e-97 rimJ 2.3.1.128 J Alanine acetyltransferase
GAMOKDAL_03217 6.5e-218 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
GAMOKDAL_03218 3.2e-214 metB 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
GAMOKDAL_03219 5.3e-138 yjcH P COG2382 Enterochelin esterase and related enzymes
GAMOKDAL_03220 2.9e-93 yjcG J Belongs to the 2H phosphoesterase superfamily. YjcG family
GAMOKDAL_03221 3e-72 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
GAMOKDAL_03222 1.7e-38
GAMOKDAL_03223 0.0 yjcD 3.6.4.12 L DNA helicase
GAMOKDAL_03224 2.9e-38 spoVIF S Stage VI sporulation protein F
GAMOKDAL_03227 5.6e-56 yjcA S Protein of unknown function (DUF1360)
GAMOKDAL_03228 3e-55 cotV S Spore Coat Protein X and V domain
GAMOKDAL_03229 9.9e-23 cotW
GAMOKDAL_03230 4e-71 cotX S Spore Coat Protein X and V domain
GAMOKDAL_03231 7.6e-96 cotY S Spore coat protein Z
GAMOKDAL_03232 1.1e-80 cotZ S Spore coat protein
GAMOKDAL_03233 5.9e-54 yjbX S Spore coat protein
GAMOKDAL_03234 3.2e-141 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
GAMOKDAL_03235 2e-149 thiD 2.5.1.3, 2.7.1.35, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
GAMOKDAL_03236 2.3e-187 thiF 2.7.7.73, 2.7.7.80 H COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
GAMOKDAL_03237 1.5e-135 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
GAMOKDAL_03238 2.6e-29 thiS H thiamine diphosphate biosynthetic process
GAMOKDAL_03239 1.8e-214 thiO 1.4.3.19 E Glycine oxidase
GAMOKDAL_03240 4.6e-106 tenI 2.5.1.3, 5.3.99.10 H Transcriptional regulator TenI
GAMOKDAL_03241 3.4e-137 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
GAMOKDAL_03242 0.0 yjbQ P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
GAMOKDAL_03243 5.1e-128 prpE 3.1.3.16, 3.6.1.41 T Asymmetrically hydrolyzes Ap4p to yield AMP and ATP
GAMOKDAL_03244 7.5e-158 yjbO 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GAMOKDAL_03245 2.1e-151 nadK 2.7.1.23 G Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GAMOKDAL_03246 2.6e-112 yjbM 2.7.6.5 S GTP pyrophosphokinase
GAMOKDAL_03247 7.8e-61 yjbL S Belongs to the UPF0738 family
GAMOKDAL_03248 4.1e-101 yjbK S protein conserved in bacteria
GAMOKDAL_03249 1.7e-99 yjbJ M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
GAMOKDAL_03250 3.7e-72 yjbI S Bacterial-like globin
GAMOKDAL_03251 3.3e-169 yjbH Q dithiol-disulfide isomerase involved in polyketide biosynthesis
GAMOKDAL_03252 1.8e-20
GAMOKDAL_03253 0.0 pepF E oligoendopeptidase F
GAMOKDAL_03254 1e-220 yjbF S Competence protein
GAMOKDAL_03255 4.4e-115 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
GAMOKDAL_03256 1.1e-110 yjbE P Integral membrane protein TerC family
GAMOKDAL_03257 3.5e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
GAMOKDAL_03258 2.6e-103 yjbC K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
GAMOKDAL_03259 4.1e-204 yjbB EGP Major Facilitator Superfamily
GAMOKDAL_03260 5.5e-172 oppF E Belongs to the ABC transporter superfamily
GAMOKDAL_03261 3.4e-197 oppD P Belongs to the ABC transporter superfamily
GAMOKDAL_03262 7.7e-166 oppC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
GAMOKDAL_03263 2.7e-166 oppB P COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
GAMOKDAL_03264 0.0 oppA E ABC transporter substrate-binding protein
GAMOKDAL_03265 6.1e-185 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
GAMOKDAL_03266 5e-147 yjbA S Belongs to the UPF0736 family
GAMOKDAL_03267 7.9e-163 appC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
GAMOKDAL_03268 7.7e-169 oppB P COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
GAMOKDAL_03269 2.4e-287 appA E COG0747 ABC-type dipeptide transport system, periplasmic component
GAMOKDAL_03270 4.2e-186 appF E Belongs to the ABC transporter superfamily
GAMOKDAL_03271 1.8e-184 appD P Belongs to the ABC transporter superfamily
GAMOKDAL_03272 1.1e-149 yjaZ O Zn-dependent protease
GAMOKDAL_03273 4e-234 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
GAMOKDAL_03274 3.9e-173 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GAMOKDAL_03275 2.7e-22 yjzB
GAMOKDAL_03276 7.3e-26 comZ S ComZ
GAMOKDAL_03277 2.5e-183 med S Transcriptional activator protein med
GAMOKDAL_03278 5.8e-100 yjaV
GAMOKDAL_03279 5.2e-141 yjaU I carboxylic ester hydrolase activity
GAMOKDAL_03280 2.3e-16 yjzD S Protein of unknown function (DUF2929)
GAMOKDAL_03281 9.5e-28 yjzC S YjzC-like protein
GAMOKDAL_03282 2.5e-175 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GAMOKDAL_03283 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase ammonia chain
GAMOKDAL_03284 5.7e-205 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
GAMOKDAL_03285 1.3e-218 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
GAMOKDAL_03286 4.1e-136 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
GAMOKDAL_03287 3.1e-231 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
GAMOKDAL_03288 4.7e-196 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
GAMOKDAL_03289 1.7e-88 norB G Major Facilitator Superfamily
GAMOKDAL_03290 4.9e-268 yitY C D-arabinono-1,4-lactone oxidase
GAMOKDAL_03291 1.5e-22 pilT S Proteolipid membrane potential modulator
GAMOKDAL_03292 6.2e-51 yitW S metal-sulfur cluster biosynthetic enzyme
GAMOKDAL_03293 2.9e-142 yjfP S COG1073 Hydrolases of the alpha beta superfamily
GAMOKDAL_03294 6e-154 yitU 3.1.3.104 S hydrolases of the HAD superfamily
GAMOKDAL_03296 2.8e-17 S Protein of unknown function (DUF3813)
GAMOKDAL_03297 5e-73 ipi S Intracellular proteinase inhibitor
GAMOKDAL_03298 6.6e-148 yitT S Uncharacterized protein conserved in bacteria (DUF2179)
GAMOKDAL_03299 1.2e-157 yitS S protein conserved in bacteria
GAMOKDAL_03300 1.3e-309 nprB 3.4.24.28 E Peptidase M4
GAMOKDAL_03301 1.4e-44 yitR S Domain of unknown function (DUF3784)
GAMOKDAL_03302 6.6e-94
GAMOKDAL_03303 1.5e-58 K Transcriptional regulator PadR-like family
GAMOKDAL_03304 7.6e-97 S Sporulation delaying protein SdpA
GAMOKDAL_03305 1.4e-170
GAMOKDAL_03306 8.5e-94
GAMOKDAL_03307 6.9e-161 cvfB S protein conserved in bacteria
GAMOKDAL_03308 4.3e-54 yajQ S Belongs to the UPF0234 family
GAMOKDAL_03309 0.0 yitJ 1.5.1.20, 2.1.1.10, 2.1.1.13 E Catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
GAMOKDAL_03310 1e-70 yjcF S Acetyltransferase (GNAT) domain
GAMOKDAL_03311 1.8e-153 yitH K Acetyltransferase (GNAT) domain
GAMOKDAL_03312 2e-228 yitG EGP Major facilitator Superfamily
GAMOKDAL_03313 6e-221 yitF 5.5.1.27 M Belongs to the mandelate racemase muconate lactonizing enzyme family
GAMOKDAL_03314 7.2e-113 yitE S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GAMOKDAL_03315 1.6e-140 yitD 4.4.1.19 S synthase
GAMOKDAL_03316 2e-118 comB 3.1.3.71 H Belongs to the ComB family
GAMOKDAL_03317 5.1e-141 cysH 1.8.4.10, 1.8.4.8, 2.7.1.25 EH Belongs to the PAPS reductase family. CysH subfamily
GAMOKDAL_03318 1.3e-229 sat 2.7.7.4 P Belongs to the sulfate adenylyltransferase family
GAMOKDAL_03319 1.4e-112 cysC 1.8.4.10, 1.8.4.8, 2.7.1.25, 2.7.7.4 P Catalyzes the synthesis of activated sulfate
GAMOKDAL_03320 1e-153 yisY I hydrolases or acyltransferases (alpha beta hydrolase superfamily)
GAMOKDAL_03321 4e-36 mcbG S Pentapeptide repeats (9 copies)
GAMOKDAL_03322 1.2e-277 yisV K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
GAMOKDAL_03323 2e-106 argO S Lysine exporter protein LysE YggA
GAMOKDAL_03324 1.5e-91 yisT S DinB family
GAMOKDAL_03325 6.3e-193 yisS 1.1.1.370 S Oxidoreductase family, C-terminal alpha/beta domain
GAMOKDAL_03326 2.4e-184 purR K helix_turn _helix lactose operon repressor
GAMOKDAL_03327 1.2e-160 yisR K Transcriptional regulator
GAMOKDAL_03328 1.5e-242 yisQ V Mate efflux family protein
GAMOKDAL_03329 4.1e-147 crtB 2.5.1.21, 2.5.1.32, 2.5.1.99 I phytoene
GAMOKDAL_03330 4.7e-88 yizA S Damage-inducible protein DinB
GAMOKDAL_03331 0.0 asnO 6.3.5.4 E Asparagine synthase
GAMOKDAL_03332 1.5e-100 yisN S Protein of unknown function (DUF2777)
GAMOKDAL_03333 0.0 wprA O Belongs to the peptidase S8 family
GAMOKDAL_03334 3e-57 yisL S UPF0344 protein
GAMOKDAL_03335 3.2e-172 yisK Q COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
GAMOKDAL_03336 2.7e-174 cotH M Spore Coat
GAMOKDAL_03337 1.5e-22 yisI S Spo0E like sporulation regulatory protein
GAMOKDAL_03338 1.9e-33 gerPA S Spore germination protein
GAMOKDAL_03339 4e-34 gerPB S cell differentiation
GAMOKDAL_03340 5.3e-54 gerPC S Spore germination protein
GAMOKDAL_03341 1.1e-23 gerPD S Spore germination protein
GAMOKDAL_03342 5.3e-63 gerPE S Spore germination protein GerPE
GAMOKDAL_03343 4.5e-32 gerPF S Spore germination protein gerPA/gerPF
GAMOKDAL_03344 1.1e-49 yisB V COG1403 Restriction endonuclease
GAMOKDAL_03345 0.0 sbcC L COG0419 ATPase involved in DNA repair
GAMOKDAL_03346 1.8e-220 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
GAMOKDAL_03347 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
GAMOKDAL_03348 0.0 addB 3.1.21.3, 3.6.4.12 L ATP-dependent helicase deoxyribonuclease subunit B
GAMOKDAL_03349 4.9e-78 yhjR S Rubrerythrin
GAMOKDAL_03350 2e-36 yhjQ C COG1145 Ferredoxin
GAMOKDAL_03351 0.0 S Sugar transport-related sRNA regulator N-term
GAMOKDAL_03352 7.4e-209 EGP Transmembrane secretion effector
GAMOKDAL_03353 4.2e-201 abrB S membrane
GAMOKDAL_03354 1.6e-188 yhjM 5.1.1.1 K Transcriptional regulator
GAMOKDAL_03355 1.2e-252 ntdA 2.6.1.104 E Belongs to the DegT DnrJ EryC1 family
GAMOKDAL_03356 1.8e-161 ntdB 3.1.3.92 S Sucrose-6F-phosphate phosphohydrolase
GAMOKDAL_03357 7.1e-200 thuB 1.1.1.361 S Oxidoreductase family, C-terminal alpha/beta domain
GAMOKDAL_03358 2.9e-213 glcP G Major Facilitator Superfamily
GAMOKDAL_03361 2e-94 yhjH K helix_turn_helix multiple antibiotic resistance protein
GAMOKDAL_03362 4.4e-280 yhjG CH FAD binding domain
GAMOKDAL_03363 1.2e-91 sipV 3.4.21.89 U Belongs to the peptidase S26 family
GAMOKDAL_03364 9.1e-110 yhjE S SNARE associated Golgi protein
GAMOKDAL_03365 6.7e-60 yhjD
GAMOKDAL_03366 6.9e-27 yhjC S Protein of unknown function (DUF3311)
GAMOKDAL_03367 5.7e-264 yhjB E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GAMOKDAL_03368 1.2e-39 yhjA S Excalibur calcium-binding domain
GAMOKDAL_03369 6.2e-168 IQ Enoyl-(Acyl carrier protein) reductase
GAMOKDAL_03370 9.3e-109 comK K Competence transcription factor
GAMOKDAL_03371 1.3e-32 yhzC S IDEAL
GAMOKDAL_03372 4.7e-157 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
GAMOKDAL_03373 5.7e-299 yhfW CE COG0665 Glycine D-amino acid oxidases (deaminating)
GAMOKDAL_03374 1.7e-182 hemAT NT chemotaxis protein
GAMOKDAL_03375 5e-91 bioY S BioY family
GAMOKDAL_03376 1.5e-277 yhfT 6.2.1.3 IQ AMP-binding enzyme C-terminal domain
GAMOKDAL_03377 4.4e-200 vraB 2.3.1.9 I Belongs to the thiolase family
GAMOKDAL_03378 3e-107 yhfR 3.1.3.73 G Belongs to the phosphoglycerate mutase family
GAMOKDAL_03379 2.8e-158 yfmC M Periplasmic binding protein
GAMOKDAL_03380 8.3e-182 yhfP 1.1.1.1 C Quinone oxidoreductase
GAMOKDAL_03381 1.1e-77 VY92_01935 K acetyltransferase
GAMOKDAL_03382 1.1e-38 aprE 3.4.21.62 O Belongs to the peptidase S8 family
GAMOKDAL_03383 2.2e-68 aprE 3.4.21.62 O Belongs to the peptidase S8 family
GAMOKDAL_03384 6.9e-237 yhfN 3.4.24.84 O Peptidase M48
GAMOKDAL_03385 1.9e-65 yhfM
GAMOKDAL_03386 5e-298 fadD 6.2.1.3 IQ AMP-binding enzyme C-terminal domain
GAMOKDAL_03387 1.2e-109 yhfK GM NmrA-like family
GAMOKDAL_03388 1.7e-190 lplJ 6.3.1.20 H Lipoate-protein ligase
GAMOKDAL_03389 1.8e-141 yhfI S COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III
GAMOKDAL_03390 3.8e-227 gltP C Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
GAMOKDAL_03391 3.7e-72 3.4.13.21 S ASCH
GAMOKDAL_03392 5.1e-198 yhfE 3.2.1.4 GH5,GH9 G peptidase M42
GAMOKDAL_03393 1.7e-134 yhfC S Putative membrane peptidase family (DUF2324)
GAMOKDAL_03394 3e-184 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GAMOKDAL_03395 1.1e-213 yhgE S YhgE Pip N-terminal domain protein
GAMOKDAL_03396 5.4e-101 yhgD K Transcriptional regulator
GAMOKDAL_03397 2.2e-265 hemG 1.14.19.9, 1.3.3.15, 1.3.3.4 H Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
GAMOKDAL_03398 8.9e-178 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
GAMOKDAL_03399 4.5e-202 hemE 4.1.1.37 H Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
GAMOKDAL_03400 0.0 pbpF 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
GAMOKDAL_03401 6.4e-90 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
GAMOKDAL_03402 4.1e-28 1.15.1.2 C Rubrerythrin
GAMOKDAL_03403 1.9e-240 yhfA C membrane
GAMOKDAL_03404 1.1e-228 yhaA 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
GAMOKDAL_03405 4.5e-113 ecsC S EcsC protein family
GAMOKDAL_03406 5.4e-215 ecsB U ABC transporter
GAMOKDAL_03407 4.6e-137 ecsA V transporter (ATP-binding protein)
GAMOKDAL_03408 4.7e-81 hit FG COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
GAMOKDAL_03409 7.1e-203 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
GAMOKDAL_03410 3.6e-80 trpP S Tryptophan transporter TrpP
GAMOKDAL_03411 5.4e-21
GAMOKDAL_03412 8.2e-39 yhaH S YtxH-like protein
GAMOKDAL_03413 1e-113 hpr K Negative regulator of protease production and sporulation
GAMOKDAL_03414 1.3e-54 yhaI S Protein of unknown function (DUF1878)
GAMOKDAL_03415 8.7e-90 yhaK S Putative zincin peptidase
GAMOKDAL_03416 2e-115 prsA 5.2.1.8 M plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
GAMOKDAL_03417 1.6e-21 yhaL S Sporulation protein YhaL
GAMOKDAL_03418 1.5e-177 yhaM L Shows a 3'-5' exoribonuclease activity
GAMOKDAL_03419 0.0 yhaN L AAA domain
GAMOKDAL_03420 2.6e-225 yhaO L DNA repair exonuclease
GAMOKDAL_03421 4.2e-215 yhaP CP COG1668 ABC-type Na efflux pump, permease component
GAMOKDAL_03422 6.8e-167 yhaQ S ABC transporter, ATP-binding protein
GAMOKDAL_03423 1.1e-26 S YhzD-like protein
GAMOKDAL_03424 1.9e-133 yhaR 5.3.3.18 I enoyl-CoA hydratase
GAMOKDAL_03426 7.8e-88 yhaT P regulatory, ligand-binding protein related to C-terminal domains of K channels
GAMOKDAL_03427 2.2e-208 yhaU P COG0475 Kef-type K transport systems, membrane components
GAMOKDAL_03428 1.8e-292 hemZ H coproporphyrinogen III oxidase
GAMOKDAL_03429 4.3e-142 yhaX S haloacid dehalogenase-like hydrolase
GAMOKDAL_03430 3.7e-204 yhaZ L DNA alkylation repair enzyme
GAMOKDAL_03431 9.5e-48 yheA S Belongs to the UPF0342 family
GAMOKDAL_03432 1.4e-201 yheB S Belongs to the UPF0754 family
GAMOKDAL_03433 3.7e-215 yheC HJ YheC/D like ATP-grasp
GAMOKDAL_03434 4.6e-268 gshB 6.3.2.2, 6.3.2.3 HJ YheC/D like ATP-grasp
GAMOKDAL_03435 1.3e-36 yheE S Family of unknown function (DUF5342)
GAMOKDAL_03436 6.3e-28 sspB S spore protein
GAMOKDAL_03437 5.3e-110 yheG GM NAD(P)H-binding
GAMOKDAL_03438 0.0 yheH V COG1132 ABC-type multidrug transport system, ATPase and permease components
GAMOKDAL_03439 0.0 yheI V COG1132 ABC-type multidrug transport system, ATPase and permease components
GAMOKDAL_03440 3.8e-83 nhaX T Belongs to the universal stress protein A family
GAMOKDAL_03441 1.2e-231 nhaC C Na H antiporter
GAMOKDAL_03442 1.8e-153 dat 2.6.1.21 E Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in the first half-reaction
GAMOKDAL_03443 4.8e-146 yheN G deacetylase
GAMOKDAL_03444 3.8e-139 cobB K NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form
GAMOKDAL_03445 9.9e-184 yhdY M Mechanosensitive ion channel
GAMOKDAL_03447 1.8e-133 yhdW 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
GAMOKDAL_03448 9.6e-65 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GAMOKDAL_03449 3.2e-43 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GAMOKDAL_03450 3.9e-246 corC1 P COG1253 Hemolysins and related proteins containing CBS domains
GAMOKDAL_03451 2e-222 yhdR 2.6.1.1 E Aminotransferase
GAMOKDAL_03452 4.1e-74 cueR K transcriptional
GAMOKDAL_03453 3.1e-240 corC1 S COG1253 Hemolysins and related proteins containing CBS domains
GAMOKDAL_03454 3e-110 plsC 2.3.1.51 I Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
GAMOKDAL_03455 1.5e-191 yhdN C Aldo keto reductase
GAMOKDAL_03456 5.5e-86 sigM K Belongs to the sigma-70 factor family. ECF subfamily
GAMOKDAL_03457 6.6e-201 yhdL S Sigma factor regulator N-terminal
GAMOKDAL_03458 8.1e-45 yhdK S Sigma-M inhibitor protein
GAMOKDAL_03459 6.9e-77 BH1582 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
GAMOKDAL_03460 1.2e-271 ydeL K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
GAMOKDAL_03461 8.2e-241 yhdH S Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
GAMOKDAL_03462 1.7e-249 yhdG E amino acid
GAMOKDAL_03463 1e-159 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
GAMOKDAL_03464 2.5e-203 citA 2.3.3.1 C Belongs to the citrate synthase family
GAMOKDAL_03465 3.8e-162 citR K Transcriptional regulator
GAMOKDAL_03466 2.5e-141 lytE 3.5.1.28 CBM50 M COG1388 FOG LysM repeat
GAMOKDAL_03467 4.9e-257 phoB 3.1.3.1 P Belongs to the alkaline phosphatase family
GAMOKDAL_03468 6.3e-276 ycgB S Stage V sporulation protein R
GAMOKDAL_03469 1.3e-237 ygxB M Conserved TM helix
GAMOKDAL_03470 6e-76 nsrR K Transcriptional regulator
GAMOKDAL_03471 1.8e-188 cwlS 3.5.1.28 CBM50 M COG1388 FOG LysM repeat
GAMOKDAL_03472 3.1e-53 yhdC S Protein of unknown function (DUF3889)
GAMOKDAL_03473 1.2e-38 yhdB S YhdB-like protein
GAMOKDAL_03474 1.4e-84 azr 1.7.1.6 S NADPH-dependent FMN reductase
GAMOKDAL_03475 7.2e-110 yhcZ K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
GAMOKDAL_03476 8e-213 yhcY 2.7.13.3 T Histidine kinase
GAMOKDAL_03477 0.0 pmmB 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
GAMOKDAL_03478 0.0 glpD 1.1.5.3 C Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
GAMOKDAL_03479 4.6e-293 glpK 2.7.1.30 C Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
GAMOKDAL_03480 1.9e-152 glpF G Belongs to the MIP aquaporin (TC 1.A.8) family
GAMOKDAL_03481 5.2e-104 glpP K Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
GAMOKDAL_03482 1.6e-260 yhxA E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
GAMOKDAL_03483 1.7e-303 yhcX 3.5.1.3 K Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
GAMOKDAL_03484 1.3e-119 yhcW 5.4.2.6 S hydrolase
GAMOKDAL_03485 9.9e-68 yhcV S COG0517 FOG CBS domain
GAMOKDAL_03486 9.3e-68 yhcU S Family of unknown function (DUF5365)
GAMOKDAL_03487 3e-170 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GAMOKDAL_03488 4.6e-103 yhcS 3.4.22.70 M COG3764 Sortase (surface protein transpeptidase)
GAMOKDAL_03489 0.0 yhcR 3.1.3.5, 3.1.31.1 F Belongs to the 5'-nucleotidase family
GAMOKDAL_03490 5.2e-100 yhcQ M Spore coat protein
GAMOKDAL_03491 8.1e-166 yhcP
GAMOKDAL_03492 2.2e-65 yhcN S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
GAMOKDAL_03493 4.1e-40 yhcM
GAMOKDAL_03494 1.2e-49 K Transcriptional regulator PadR-like family
GAMOKDAL_03495 8.3e-78 S Protein of unknown function (DUF2812)
GAMOKDAL_03496 6.3e-220 ydjN U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
GAMOKDAL_03497 1.3e-196 yhcK 2.7.7.65 T COG2199 FOG GGDEF domain
GAMOKDAL_03498 2e-149 metQ M Belongs to the nlpA lipoprotein family
GAMOKDAL_03499 1e-30 cspB K Cold-shock protein
GAMOKDAL_03500 9.6e-164 yhcI S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
GAMOKDAL_03501 2.2e-165 yhcH V ABC transporter, ATP-binding protein
GAMOKDAL_03502 1.6e-123 yhcG V ABC transporter, ATP-binding protein
GAMOKDAL_03503 6.6e-60 yhcF K Transcriptional regulator
GAMOKDAL_03504 7.8e-55
GAMOKDAL_03505 1.5e-35 yhcC
GAMOKDAL_03506 1e-98 yhcB 1.6.5.2 S Belongs to the WrbA family
GAMOKDAL_03507 3.1e-271 yhcA EGP Major facilitator Superfamily
GAMOKDAL_03508 4e-97 yhbJ V COG1566 Multidrug resistance efflux pump
GAMOKDAL_03509 2.2e-76 yhbI K DNA-binding transcription factor activity
GAMOKDAL_03510 2.5e-225 yhbH S Belongs to the UPF0229 family
GAMOKDAL_03511 0.0 prkA T Ser protein kinase
GAMOKDAL_03512 2.1e-70 yhbF M COG1664 Integral membrane protein CcmA involved in cell shape determination
GAMOKDAL_03513 2.7e-65 yhbE M COG1664 Integral membrane protein CcmA involved in cell shape determination
GAMOKDAL_03514 1.8e-108 yhbD K Protein of unknown function (DUF4004)
GAMOKDAL_03515 8.2e-87 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
GAMOKDAL_03516 1.7e-176 yhbB S Putative amidase domain
GAMOKDAL_03517 1.5e-222 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
GAMOKDAL_03518 7.9e-114 yhzB S B3/4 domain
GAMOKDAL_03520 4.4e-29 K Transcriptional regulator
GAMOKDAL_03521 4.1e-78 ygaO
GAMOKDAL_03522 1.7e-41 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GAMOKDAL_03524 3.1e-217 ssuD 1.14.14.5 C Catalyzes the desulfonation of aliphatic sulfonates
GAMOKDAL_03525 9.4e-147 ssuC P COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
GAMOKDAL_03526 1.2e-169 ssuA M Sulfonate ABC transporter
GAMOKDAL_03527 2.5e-138 ssuB P COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component
GAMOKDAL_03528 7.9e-290 katA 1.11.1.6 P serves to protect cells from the toxic effects of hydrogen peroxide
GAMOKDAL_03530 0.0 thiC 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
GAMOKDAL_03531 8.5e-75 pepE 3.4.11.2, 3.4.13.21 E Belongs to the peptidase S51 family
GAMOKDAL_03532 1.2e-26
GAMOKDAL_03533 1.9e-141 spo0M S COG4326 Sporulation control protein
GAMOKDAL_03545 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GAMOKDAL_03546 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GAMOKDAL_03547 1.2e-17 gerE K Transcriptional regulator
GAMOKDAL_03548 6.5e-78 ybgC 3.1.2.23, 3.1.2.28 S thioesterase
GAMOKDAL_03549 1.7e-147 sdhB 1.3.5.1, 1.3.5.4 C succinate dehydrogenase
GAMOKDAL_03550 0.0 sdhA 1.3.5.1, 1.3.5.4 C succinate dehydrogenase
GAMOKDAL_03551 2.4e-107 sdhC C succinate dehydrogenase
GAMOKDAL_03552 1.2e-79 yslB S Protein of unknown function (DUF2507)
GAMOKDAL_03553 6.3e-216 lysC 1.1.1.3, 2.7.2.4 E Belongs to the aspartokinase family
GAMOKDAL_03554 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
GAMOKDAL_03555 2e-52 trxA O Belongs to the thioredoxin family
GAMOKDAL_03556 2.6e-304 xsa 3.2.1.55 GH51 G Alpha-L-arabinofuranosidase C-terminus
GAMOKDAL_03558 1.3e-176 etfA C Electron transfer flavoprotein
GAMOKDAL_03559 1.3e-134 etfB C Electron transfer flavoprotein
GAMOKDAL_03560 2.7e-135 fadB 4.2.1.17 I Belongs to the enoyl-CoA hydratase isomerase family
GAMOKDAL_03561 4e-99 fadR K Transcriptional regulator
GAMOKDAL_03562 0.0 lcfA 6.2.1.3 IQ COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
GAMOKDAL_03563 7.3e-68 yshE S membrane
GAMOKDAL_03564 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
GAMOKDAL_03565 0.0 polX L COG1796 DNA polymerase IV (family X)
GAMOKDAL_03566 1.3e-85 cvpA S membrane protein, required for colicin V production
GAMOKDAL_03567 2.4e-40 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
GAMOKDAL_03568 7.1e-167 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GAMOKDAL_03569 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GAMOKDAL_03570 8e-196 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GAMOKDAL_03571 9.1e-133 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GAMOKDAL_03572 5.8e-32 sspI S Belongs to the SspI family
GAMOKDAL_03573 8.6e-204 ysfB KT regulator
GAMOKDAL_03574 5.7e-261 glcD 1.1.3.15 C Glycolate oxidase subunit
GAMOKDAL_03575 2.3e-256 glcF C Glycolate oxidase
GAMOKDAL_03576 4.5e-53 ysfE 4.4.1.5 E Glyoxalase-like domain
GAMOKDAL_03577 0.0 cstA T Carbon starvation protein
GAMOKDAL_03578 3.9e-300 abfA 3.2.1.55 GH51 G alpha-L-arabinofuranosidase activity
GAMOKDAL_03579 3.4e-144 araQ G transport system permease
GAMOKDAL_03580 5.8e-17 araP G carbohydrate transport
GAMOKDAL_03581 4.8e-140 araP G carbohydrate transport
GAMOKDAL_03582 5.3e-253 araN G carbohydrate transport
GAMOKDAL_03583 7.5e-222 egsA 1.1.1.261 I Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species
GAMOKDAL_03584 3e-145 araL 3.1.3.41 G Haloacid dehalogenase-like hydrolase
GAMOKDAL_03585 8.4e-133 araD 4.1.2.17, 4.2.1.109, 5.1.3.4 G COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
GAMOKDAL_03586 0.0 araB 2.7.1.16 C Belongs to the ribulokinase family
GAMOKDAL_03587 1.6e-293 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
GAMOKDAL_03588 3.1e-189 abnA 3.2.1.99 GH43 G Belongs to the glycosyl hydrolase 43 family
GAMOKDAL_03589 3.8e-204 ysdC G COG1363 Cellulase M and related proteins
GAMOKDAL_03590 3.5e-67 ysdB S Sigma-w pathway protein YsdB
GAMOKDAL_03591 7.5e-45 ysdA S Membrane
GAMOKDAL_03592 3.6e-58 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GAMOKDAL_03593 9e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
GAMOKDAL_03594 3.3e-86 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GAMOKDAL_03596 2.4e-111 lrgB M Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgA, with the holin-like protein CidA. The LrgAB and CidA proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses
GAMOKDAL_03597 3.1e-48 lrgA S Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgB, with the holin-like protein CidA. The LrgAB and CidA proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses
GAMOKDAL_03598 1.6e-129 lytT T COG3279 Response regulator of the LytR AlgR family
GAMOKDAL_03599 0.0 lytS 2.7.13.3 T Histidine kinase
GAMOKDAL_03600 2.8e-148 ysaA S HAD-hyrolase-like
GAMOKDAL_03601 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GAMOKDAL_03603 1.4e-158 ytxC S YtxC-like family
GAMOKDAL_03604 6e-109 ytxB S SNARE associated Golgi protein
GAMOKDAL_03605 6.6e-173 dnaI L Primosomal protein DnaI
GAMOKDAL_03606 7.7e-266 dnaB L Membrane attachment protein
GAMOKDAL_03607 1.1e-80 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GAMOKDAL_03608 2e-67 speH 4.1.1.50 E Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
GAMOKDAL_03609 2.8e-193 gapB 1.2.1.12, 1.2.1.59 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
GAMOKDAL_03610 4.9e-66 ytcD K Transcriptional regulator
GAMOKDAL_03611 2.4e-204 ytbD EGP Major facilitator Superfamily
GAMOKDAL_03612 2e-160 ytbE S reductase
GAMOKDAL_03613 2.9e-97 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GAMOKDAL_03614 1.1e-107 ytaF P Probably functions as a manganese efflux pump
GAMOKDAL_03615 3.9e-156 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
GAMOKDAL_03616 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GAMOKDAL_03617 0.0 phoR 2.7.13.3 T Signal transduction histidine kinase
GAMOKDAL_03618 2.8e-131 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
GAMOKDAL_03619 3.1e-170 mdh 1.1.1.37 C Catalyzes the reversible oxidation of malate to oxaloacetate
GAMOKDAL_03620 4.1e-242 icd 1.1.1.42 C isocitrate
GAMOKDAL_03621 4.7e-210 citZ 2.3.3.1 C Belongs to the citrate synthase family
GAMOKDAL_03622 2.3e-70 yeaL S membrane
GAMOKDAL_03623 2.6e-192 ytvI S sporulation integral membrane protein YtvI
GAMOKDAL_03624 8.7e-63 fxsA S COG3030 Protein affecting phage T7 exclusion by the F plasmid
GAMOKDAL_03625 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
GAMOKDAL_03626 3.4e-180 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
GAMOKDAL_03627 4.3e-183 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
GAMOKDAL_03628 8.4e-162 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
GAMOKDAL_03629 1.5e-225 ytsJ 1.1.1.38 C Malate dehydrogenase
GAMOKDAL_03630 0.0 dnaE 2.7.7.7 L DNA polymerase
GAMOKDAL_03631 3.2e-56 ytrH S Sporulation protein YtrH
GAMOKDAL_03632 8.2e-69 ytrI
GAMOKDAL_03633 9.2e-29
GAMOKDAL_03634 7.8e-182 nrnA 3.1.13.3, 3.1.3.7 S COG0618 Exopolyphosphatase-related proteins
GAMOKDAL_03635 2.4e-47 ytpI S YtpI-like protein
GAMOKDAL_03636 8e-241 ytoI K transcriptional regulator containing CBS domains
GAMOKDAL_03637 5.8e-158 ytnM S membrane transporter protein
GAMOKDAL_03638 4.8e-235 ytnL 3.5.1.47 E hydrolase activity
GAMOKDAL_03639 1e-125 ribF 2.7.1.26, 2.7.7.2 H Riboflavin kinase
GAMOKDAL_03640 2.2e-254 moxC C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GAMOKDAL_03641 1.2e-45 ytnI O COG0695 Glutaredoxin and related proteins
GAMOKDAL_03642 2.9e-182 ytmO C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GAMOKDAL_03643 1e-142 tcyN 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
GAMOKDAL_03644 6.4e-120 tcyM U Binding-protein-dependent transport system inner membrane component
GAMOKDAL_03645 3.7e-123 tcyL P Binding-protein-dependent transport system inner membrane component
GAMOKDAL_03646 4.4e-149 tcyK M Bacterial periplasmic substrate-binding proteins
GAMOKDAL_03647 9.5e-152 tcyK ET Bacterial periplasmic substrate-binding proteins
GAMOKDAL_03648 1.5e-100 ytmI K Acetyltransferase (GNAT) domain
GAMOKDAL_03649 1.5e-172 ytlI K LysR substrate binding domain
GAMOKDAL_03650 2.6e-130 ytkL S Belongs to the UPF0173 family
GAMOKDAL_03651 1.2e-140 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
GAMOKDAL_03653 8.9e-267 argH 4.3.2.1 E argininosuccinate lyase
GAMOKDAL_03654 3e-234 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
GAMOKDAL_03655 3.6e-88 moaB 2.7.7.75 H May be involved in the biosynthesis of molybdopterin
GAMOKDAL_03656 3.7e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GAMOKDAL_03657 1.2e-164 ytxK 2.1.1.72 L DNA methylase
GAMOKDAL_03658 2.4e-89 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
GAMOKDAL_03659 8.7e-70 ytfJ S Sporulation protein YtfJ
GAMOKDAL_03660 5.6e-116 ytfI S Protein of unknown function (DUF2953)
GAMOKDAL_03661 8.5e-87 yteJ S RDD family
GAMOKDAL_03662 7.4e-178 sppA OU signal peptide peptidase SppA
GAMOKDAL_03663 4.8e-148 nadK 2.7.1.23 G Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GAMOKDAL_03664 0.0 ytcJ S amidohydrolase
GAMOKDAL_03665 2.9e-306 acsA 6.2.1.1, 6.2.1.2 I COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
GAMOKDAL_03666 2e-29 sspB S spore protein
GAMOKDAL_03667 3.5e-227 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GAMOKDAL_03668 5e-207 iscS2 2.8.1.7 E Cysteine desulfurase
GAMOKDAL_03669 4.9e-238 brnQ E Component of the transport system for branched-chain amino acids
GAMOKDAL_03670 4.6e-273 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
GAMOKDAL_03671 3.5e-154 hisK 3.1.3.15 E COG1387 Histidinol phosphatase and related hydrolases of the PHP family
GAMOKDAL_03672 1e-108 yttP K Transcriptional regulator
GAMOKDAL_03673 2.2e-87 ytsP 1.8.4.14 T GAF domain-containing protein
GAMOKDAL_03674 2.4e-311 ytrP 2.7.7.65 T COG2199 FOG GGDEF domain
GAMOKDAL_03675 2.5e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GAMOKDAL_03677 1.8e-237 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GAMOKDAL_03678 0.0 acsA 6.2.1.1 I COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
GAMOKDAL_03679 3.6e-122 acuA K Part of the acuABC operon, which is possibly involved in the breakdown of acetoin and butanediol. Acts as an acetyltransferase inactivating acetyl-CoA synthetase AcsA via acetylation at a Lys residue
GAMOKDAL_03680 1.6e-117 acuB S Domain in cystathionine beta-synthase and other proteins.
GAMOKDAL_03681 6.1e-224 acuC BQ histone deacetylase
GAMOKDAL_03682 6.8e-125 motS N Flagellar motor protein
GAMOKDAL_03683 6e-146 motA N flagellar motor
GAMOKDAL_03684 1.7e-182 ccpA K catabolite control protein A
GAMOKDAL_03685 4.9e-196 aroF 2.5.1.54, 5.4.99.5 E Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate
GAMOKDAL_03686 2.8e-54 ytxJ O Protein of unknown function (DUF2847)
GAMOKDAL_03687 6.6e-17 ytxH S COG4980 Gas vesicle protein
GAMOKDAL_03688 2.1e-17 ytxG S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
GAMOKDAL_03689 1.8e-253 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
GAMOKDAL_03690 0.0 sftA D Belongs to the FtsK SpoIIIE SftA family
GAMOKDAL_03691 9.7e-109 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GAMOKDAL_03692 9.8e-149 ytpQ S Belongs to the UPF0354 family
GAMOKDAL_03693 2.1e-57 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
GAMOKDAL_03694 5.9e-79 ytoQ S Nucleoside 2-deoxyribosyltransferase YtoQ
GAMOKDAL_03695 4e-206 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
GAMOKDAL_03696 2.2e-51 ytzB S small secreted protein
GAMOKDAL_03697 0.0 sfcA 1.1.1.38 C Malate dehydrogenase
GAMOKDAL_03698 7.1e-150 ytnP S COG0491 Zn-dependent hydrolases, including glyoxylases
GAMOKDAL_03699 2.4e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
GAMOKDAL_03700 7.8e-45 ytzH S YtzH-like protein
GAMOKDAL_03701 6.1e-151 ytmP 2.7.1.89 M Phosphotransferase
GAMOKDAL_03702 0.0 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
GAMOKDAL_03703 2.5e-180 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
GAMOKDAL_03704 1.3e-165 ytlQ
GAMOKDAL_03705 8.9e-101 ligT 3.1.4.58, 3.5.1.42 J Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
GAMOKDAL_03706 8.6e-173 ytkP 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
GAMOKDAL_03707 2.3e-270 pepV 3.5.1.18 E Dipeptidase
GAMOKDAL_03708 7.2e-226 pbuO S permease
GAMOKDAL_03709 6e-200 ythQ U Bacterial ABC transporter protein EcsB
GAMOKDAL_03710 6.2e-131 ythP V ABC transporter
GAMOKDAL_03711 2.4e-33 ytzE K COG1349 Transcriptional regulators of sugar metabolism
GAMOKDAL_03712 2.2e-131 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GAMOKDAL_03713 4.2e-292 ytgP S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
GAMOKDAL_03714 1.4e-231 ytfP S HI0933-like protein
GAMOKDAL_03715 3.4e-283 opuD M Belongs to the BCCT transporter (TC 2.A.15) family
GAMOKDAL_03716 3.1e-26 yteV S Sporulation protein Cse60
GAMOKDAL_03717 2.6e-115 yteU S Integral membrane protein
GAMOKDAL_03718 5e-256 yteT S Oxidoreductase family, C-terminal alpha/beta domain
GAMOKDAL_03719 3.9e-72 yteS G transport
GAMOKDAL_03720 1.5e-219 yteR 3.2.1.172 GH105 G unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
GAMOKDAL_03721 7.5e-172 lplB G COG4209 ABC-type polysaccharide transport system, permease component
GAMOKDAL_03722 0.0 ytdP K Transcriptional regulator
GAMOKDAL_03723 6.9e-289 ytcQ G COG1653 ABC-type sugar transport system, periplasmic component
GAMOKDAL_03724 1.5e-150 ytcP G COG0395 ABC-type sugar transport system, permease component
GAMOKDAL_03725 2.4e-136 udh 1.1.1.203, 1.1.1.388 GM NAD dependent epimerase/dehydratase family
GAMOKDAL_03726 4.5e-219 bioI 1.14.14.46 C Cytochrome P450
GAMOKDAL_03727 2.2e-190 bioB 2.8.1.6 H Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
GAMOKDAL_03728 1.5e-124 bioD 6.3.3.3 H Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
GAMOKDAL_03729 2.5e-214 bioF 2.3.1.29, 2.3.1.47, 6.2.1.14 H Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
GAMOKDAL_03730 2.3e-259 bioA 2.6.1.105, 2.6.1.62 H Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor
GAMOKDAL_03731 3.8e-139 bioW 2.3.1.47, 6.2.1.14 H Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP
GAMOKDAL_03732 9.2e-172 ytaP S Acetyl xylan esterase (AXE1)
GAMOKDAL_03733 2.5e-189 msmR K Transcriptional regulator
GAMOKDAL_03734 6.8e-245 msmE G Bacterial extracellular solute-binding protein
GAMOKDAL_03735 6.2e-168 amyD P ABC transporter
GAMOKDAL_03736 4.4e-144 amyC P ABC transporter (permease)
GAMOKDAL_03737 4e-253 melA 3.2.1.122, 3.2.1.22, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase
GAMOKDAL_03738 8.1e-51 ytwF P Sulfurtransferase
GAMOKDAL_03739 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
GAMOKDAL_03740 7.7e-55 ytvB S Protein of unknown function (DUF4257)
GAMOKDAL_03741 1.1e-141 pfyP T Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
GAMOKDAL_03742 6e-211 yttB EGP Major facilitator Superfamily
GAMOKDAL_03743 1.1e-42 yttA 2.7.13.3 S Pfam Transposase IS66
GAMOKDAL_03744 0.0 bceB V ABC transporter (permease)
GAMOKDAL_03745 1.1e-138 bceA V ABC transporter, ATP-binding protein
GAMOKDAL_03746 3.4e-183 T PhoQ Sensor
GAMOKDAL_03747 5.7e-129 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
GAMOKDAL_03748 2.1e-233 ytrF V COG0577 ABC-type antimicrobial peptide transport system, permease component
GAMOKDAL_03749 9.1e-127 ytrE V ABC transporter, ATP-binding protein
GAMOKDAL_03750 6.3e-150
GAMOKDAL_03751 2e-164 P ABC-2 family transporter protein
GAMOKDAL_03752 4.2e-161 ytrB P abc transporter atp-binding protein
GAMOKDAL_03753 5.1e-66 ytrA K GntR family transcriptional regulator
GAMOKDAL_03755 6.7e-41 ytzC S Protein of unknown function (DUF2524)
GAMOKDAL_03756 8.1e-190 yhcC S Fe-S oxidoreductase
GAMOKDAL_03757 1.2e-103 ytqB J Putative rRNA methylase
GAMOKDAL_03758 2e-216 ytpB 4.2.3.130 S Tetraprenyl-beta-curcumene synthase
GAMOKDAL_03759 2.8e-148 ytpA 3.1.1.5 I Alpha beta hydrolase
GAMOKDAL_03760 2.3e-58 ytoA S COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
GAMOKDAL_03761 8.4e-257 ytnA E COG1113 Gamma-aminobutyrate permease and related permeases
GAMOKDAL_03762 0.0 asnB 6.3.5.4 E Asparagine synthase
GAMOKDAL_03763 4.3e-225 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GAMOKDAL_03764 1.1e-308 pckA 4.1.1.49 C Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
GAMOKDAL_03765 1.2e-38 ytmB S Protein of unknown function (DUF2584)
GAMOKDAL_03766 1.6e-148 ytmA E COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases
GAMOKDAL_03767 1.8e-187 ytlA P COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components
GAMOKDAL_03768 1.4e-144 ytlC P ABC transporter
GAMOKDAL_03769 1.8e-142 ytlD P COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
GAMOKDAL_03770 2.8e-87 ytkD 3.6.1.55 L Belongs to the Nudix hydrolase family
GAMOKDAL_03771 7e-63 ytkC S Bacteriophage holin family
GAMOKDAL_03772 2.1e-76 dps P Belongs to the Dps family
GAMOKDAL_03774 1.1e-72 ytkA S YtkA-like
GAMOKDAL_03775 1.6e-87 luxS 4.4.1.21 T Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
GAMOKDAL_03776 2.8e-102 ytiB 4.2.1.1 P Reversible hydration of carbon dioxide
GAMOKDAL_03777 3.6e-41 rpmE2 J Ribosomal protein L31
GAMOKDAL_03778 1.1e-248 cydA 1.10.3.14 C oxidase, subunit
GAMOKDAL_03779 4e-187 cydB 1.10.3.14 C COG1294 Cytochrome bd-type quinol oxidase, subunit 2
GAMOKDAL_03780 1.1e-24 S Domain of Unknown Function (DUF1540)
GAMOKDAL_03781 4.4e-150 troD P 'COG1108 ABC-type Mn2 Zn2 transport systems, permease components'
GAMOKDAL_03782 4.8e-230 mntC P COG1108 ABC-type Mn2 Zn2 transport systems, permease components
GAMOKDAL_03783 1e-136 mntB P 'COG1121 ABC-type Mn Zn transport systems, ATPase component'
GAMOKDAL_03784 9.7e-169 troA P Belongs to the bacterial solute-binding protein 9 family
GAMOKDAL_03785 7.8e-213 menC 4.2.1.113 H Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)
GAMOKDAL_03786 3.9e-273 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
GAMOKDAL_03787 4.2e-155 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
GAMOKDAL_03788 1.6e-154 menH 4.2.99.20 S Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC)
GAMOKDAL_03789 0.0 menD 2.2.1.9 H Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
GAMOKDAL_03790 2.1e-271 menF 5.4.4.2 HQ Isochorismate synthase
GAMOKDAL_03791 2.6e-132 dksA T COG1734 DnaK suppressor protein
GAMOKDAL_03792 1.6e-151 galU 2.7.7.9 M Nucleotidyl transferase
GAMOKDAL_03793 5.4e-242 ugd 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
GAMOKDAL_03794 2.6e-177 ytcB 5.1.3.2 M NAD-dependent epimerase dehydratase
GAMOKDAL_03795 8.2e-232 ytcC M Glycosyltransferase Family 4
GAMOKDAL_03797 9.7e-205 cotS S Seems to be required for the assembly of the CotSA protein in spores
GAMOKDAL_03798 2.2e-215 cotSA M Glycosyl transferases group 1
GAMOKDAL_03799 4.4e-205 cotI S Spore coat protein
GAMOKDAL_03800 1.9e-75 tspO T membrane
GAMOKDAL_03801 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
GAMOKDAL_03802 7.1e-283 glgA 2.4.1.21 GT5 G Synthesizes alpha-1,4-glucan chains using ADP-glucose
GAMOKDAL_03803 8.3e-177 glgD 2.4.1.21, 2.7.7.27 GT5 G Glucose-1-phosphate adenylyltransferase, GlgD subunit
GAMOKDAL_03804 6.1e-197 glgC 2.7.7.27 G Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
GAMOKDAL_03805 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
GAMOKDAL_03814 7.8e-08
GAMOKDAL_03815 1.3e-09
GAMOKDAL_03824 6.7e-167 ygxA S Nucleotidyltransferase-like
GAMOKDAL_03825 2.8e-55 ygzB S UPF0295 protein
GAMOKDAL_03826 4e-80 perR P Belongs to the Fur family
GAMOKDAL_03827 2.8e-87 bcp 1.11.1.15 O Peroxiredoxin
GAMOKDAL_03828 4e-245 gsaB 5.4.3.8 H Glutamate-1-semialdehyde aminotransferase
GAMOKDAL_03829 8.7e-180 ygaE S Membrane
GAMOKDAL_03830 3.1e-301 ygaD V ABC transporter
GAMOKDAL_03831 1.3e-104 ygaC J Belongs to the UPF0374 family
GAMOKDAL_03832 3.3e-37 ygaB S YgaB-like protein
GAMOKDAL_03833 2.4e-08 sspE S Small, acid-soluble spore protein, gamma-type
GAMOKDAL_03834 2.9e-134 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
GAMOKDAL_03835 6.9e-36 yfhS
GAMOKDAL_03836 3.3e-210 mutY L A G-specific
GAMOKDAL_03837 1.2e-185 yfhP S membrane-bound metal-dependent
GAMOKDAL_03838 0.0 yfhO S Bacterial membrane protein YfhO
GAMOKDAL_03839 2.7e-185 csbB GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
GAMOKDAL_03840 1.3e-170 yfhM S Alpha beta hydrolase
GAMOKDAL_03841 3.5e-51 yfhL S SdpI/YhfL protein family
GAMOKDAL_03842 2.4e-87 batE T Bacterial SH3 domain homologues
GAMOKDAL_03843 1.3e-44 yfhJ S WVELL protein
GAMOKDAL_03844 6.2e-20 sspK S reproduction
GAMOKDAL_03845 1.1e-209 yfhI EGP Major facilitator Superfamily
GAMOKDAL_03847 9.7e-52 yfhH S Protein of unknown function (DUF1811)
GAMOKDAL_03848 2.5e-141 recX 2.4.1.337 GT4 S Modulates RecA activity
GAMOKDAL_03849 7.9e-171 yfhF S nucleoside-diphosphate sugar epimerase
GAMOKDAL_03851 6.1e-25 yfhD S YfhD-like protein
GAMOKDAL_03852 1.5e-106 yfhC C nitroreductase
GAMOKDAL_03853 1.1e-166 yfhB 5.3.3.17 S PhzF family
GAMOKDAL_03854 6.8e-171 yfhA P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GAMOKDAL_03855 1.5e-175 yfiZ P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GAMOKDAL_03856 2.8e-174 yfiY P ABC transporter substrate-binding protein
GAMOKDAL_03857 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
GAMOKDAL_03858 4.9e-79 yfiV K transcriptional
GAMOKDAL_03859 3.4e-283 yfiU EGP Major facilitator Superfamily
GAMOKDAL_03860 4.7e-99 yfiT S Belongs to the metal hydrolase YfiT family
GAMOKDAL_03861 1.8e-213 yfiS EGP Major facilitator Superfamily
GAMOKDAL_03862 3.2e-107 yfiR K Transcriptional regulator
GAMOKDAL_03863 4.5e-197 yfiQ G COG3936 Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
GAMOKDAL_03864 4.4e-80 estA 3.1.1.3 S acetyltransferases and hydrolases with the alpha beta hydrolase fold
GAMOKDAL_03865 8.3e-99 padR K transcriptional
GAMOKDAL_03866 1.8e-204 V COG0842 ABC-type multidrug transport system, permease component
GAMOKDAL_03867 8.9e-207 V ABC-2 family transporter protein
GAMOKDAL_03868 4.6e-166 V ABC transporter, ATP-binding protein
GAMOKDAL_03869 2.8e-109 KT LuxR family transcriptional regulator
GAMOKDAL_03870 5.3e-188 yxjM T Histidine kinase
GAMOKDAL_03871 4.3e-230 S Oxidoreductase
GAMOKDAL_03872 2.2e-176 G Xylose isomerase
GAMOKDAL_03873 2.2e-260 iolT EGP Major facilitator Superfamily
GAMOKDAL_03874 3e-173 K AraC-like ligand binding domain
GAMOKDAL_03875 4.1e-161 yfiE 1.13.11.2 S glyoxalase
GAMOKDAL_03876 1.1e-63 mhqP S DoxX
GAMOKDAL_03877 0.0 yfiC V COG1132 ABC-type multidrug transport system, ATPase and permease components
GAMOKDAL_03878 4.4e-308 yfiB3 V ABC transporter
GAMOKDAL_03879 5.1e-252 yobO M COG5434 Endopolygalacturonase
GAMOKDAL_03880 5.9e-141 yobO M COG5434 Endopolygalacturonase
GAMOKDAL_03881 2e-294 glvC 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
GAMOKDAL_03882 1e-139 glvR K Helix-turn-helix domain, rpiR family
GAMOKDAL_03883 2.9e-262 aglB 3.2.1.122, 3.2.1.22, 3.2.1.86 GH4,GT4 G COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
GAMOKDAL_03884 1.1e-44 yfjA S Belongs to the WXG100 family
GAMOKDAL_03885 5e-189 yfjB
GAMOKDAL_03886 4.1e-144 yfjC
GAMOKDAL_03887 1.8e-101 yfjD S Family of unknown function (DUF5381)
GAMOKDAL_03888 1.9e-79 S Family of unknown function (DUF5381)
GAMOKDAL_03889 4e-56 yfjF S UPF0060 membrane protein
GAMOKDAL_03890 9.8e-25 sspH S Belongs to the SspH family
GAMOKDAL_03891 0.0 acoR KQ COG3284 Transcriptional activator of acetoin glycerol metabolism
GAMOKDAL_03892 1.4e-251 acoL 1.8.1.4 C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
GAMOKDAL_03893 9.3e-196 acoC 2.3.1.12, 2.3.1.61 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
GAMOKDAL_03894 3.8e-190 acoB C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
GAMOKDAL_03895 2.6e-191 acoA C COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
GAMOKDAL_03896 4e-26 yfjL
GAMOKDAL_03897 8.4e-81 yfjM S Psort location Cytoplasmic, score
GAMOKDAL_03898 1.8e-189 yfjN J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GAMOKDAL_03899 3.9e-44 S YfzA-like protein
GAMOKDAL_03900 1.1e-267 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GAMOKDAL_03901 1e-167 yfjP 3.2.2.21 L COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
GAMOKDAL_03902 1.7e-184 corA P Mediates influx of magnesium ions
GAMOKDAL_03903 2e-147 yfjR 1.1.1.31 I NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
GAMOKDAL_03904 1.7e-153 pdaA G deacetylase
GAMOKDAL_03905 1.1e-26 yfjT
GAMOKDAL_03906 5.4e-222 yfkA S YfkB-like domain
GAMOKDAL_03907 3e-148 yfkC M Mechanosensitive ion channel
GAMOKDAL_03908 1.2e-146 yfkD S YfkD-like protein
GAMOKDAL_03909 6.1e-183 cax P COG0387 Ca2 H antiporter
GAMOKDAL_03910 7.7e-219 ycaD EGP COG0477 Permeases of the major facilitator superfamily
GAMOKDAL_03911 5e-08
GAMOKDAL_03912 9.7e-144 yihY S Belongs to the UPF0761 family
GAMOKDAL_03913 9.2e-50 yfkI S gas vesicle protein
GAMOKDAL_03914 2.2e-84 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
GAMOKDAL_03915 2.3e-28 yfkK S Belongs to the UPF0435 family
GAMOKDAL_03916 8.9e-207 ydiM EGP Major facilitator Superfamily
GAMOKDAL_03917 9.6e-89 yfkM 1.11.1.6, 3.5.1.124 S protease
GAMOKDAL_03918 0.0 cpdB 3.1.3.5, 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
GAMOKDAL_03919 4e-124 yfkO C nitroreductase
GAMOKDAL_03920 6.7e-133 treR K transcriptional
GAMOKDAL_03921 0.0 treC 3.2.1.93 GH13 G COG0366 Glycosidases
GAMOKDAL_03922 8.5e-257 treP 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
GAMOKDAL_03923 9.9e-283 yfkQ EG Spore germination protein
GAMOKDAL_03924 2.5e-206 yfkR S spore germination
GAMOKDAL_03926 1.9e-192 E Spore germination protein
GAMOKDAL_03927 2.2e-252 agcS_1 E Sodium alanine symporter
GAMOKDAL_03928 6e-67 yhdN S Domain of unknown function (DUF1992)
GAMOKDAL_03929 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
GAMOKDAL_03930 3.3e-250 nagE 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G COG1263 Phosphotransferase system IIC components, glucose maltose N-acetylglucosamine-specific
GAMOKDAL_03931 1.1e-138 map 3.4.11.18 E Methionine aminopeptidase
GAMOKDAL_03932 2.4e-50 yflH S Protein of unknown function (DUF3243)
GAMOKDAL_03933 4.1e-19 yflI
GAMOKDAL_03934 8.9e-18 yflJ S Protein of unknown function (DUF2639)
GAMOKDAL_03935 3.2e-121 yflK S protein conserved in bacteria
GAMOKDAL_03936 1.1e-43 acyP 3.6.1.7 C Belongs to the acylphosphatase family
GAMOKDAL_03937 1.3e-215 nos 1.14.14.47 C Belongs to the NOS family. Bacterial NOS oxygenase subfamily
GAMOKDAL_03938 3.9e-150 yflN S COG0491 Zn-dependent hydrolases, including glyoxylases
GAMOKDAL_03939 2.5e-226 citM C Citrate transporter
GAMOKDAL_03940 1.7e-179 yflP S Tripartite tricarboxylate transporter family receptor
GAMOKDAL_03941 2.2e-117 citT T response regulator
GAMOKDAL_03942 1.4e-287 citS 2.7.13.3 T Signal transduction histidine kinase regulating citrate malate metabolism
GAMOKDAL_03943 5.5e-235 yflS P Sodium:sulfate symporter transmembrane region
GAMOKDAL_03944 1.4e-239 pel 4.2.2.10, 4.2.2.2 G Pectate lyase
GAMOKDAL_03945 1.3e-57 yflT S Heat induced stress protein YflT
GAMOKDAL_03946 2.9e-24 S Protein of unknown function (DUF3212)
GAMOKDAL_03947 4.2e-167 fecB P COG4594 ABC-type Fe3 -citrate transport system, periplasmic component
GAMOKDAL_03948 1.2e-169 viuD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GAMOKDAL_03949 2.4e-168 fecD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GAMOKDAL_03950 1.1e-149 yfmF 3.6.3.34 P ATPases associated with a variety of cellular activities
GAMOKDAL_03951 5.7e-186 yfmJ S N-terminal domain of oxidoreductase
GAMOKDAL_03952 2.5e-77 yfmK 2.3.1.128 K acetyltransferase
GAMOKDAL_03953 4.5e-200 yfmL 3.6.4.13 L COG0513 Superfamily II DNA and RNA helicases
GAMOKDAL_03954 7.1e-297 yfmM S COG0488 ATPase components of ABC transporters with duplicated ATPase domains
GAMOKDAL_03955 6.3e-57
GAMOKDAL_03957 6.4e-19
GAMOKDAL_03958 1.6e-59 isp O Subtilase family
GAMOKDAL_03959 6.2e-208 yfmO EGP Major facilitator Superfamily
GAMOKDAL_03960 1.4e-69 yfmP K transcriptional
GAMOKDAL_03961 1.3e-73 yfmQ S Uncharacterised protein from bacillus cereus group
GAMOKDAL_03962 0.0 yfmR S COG0488 ATPase components of ABC transporters with duplicated ATPase domains
GAMOKDAL_03963 1.1e-113 yfmS NT chemotaxis protein
GAMOKDAL_03964 1.8e-278 yfmT 1.2.1.3, 1.2.1.67 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
GAMOKDAL_03965 6.4e-241 yfnA E amino acid
GAMOKDAL_03966 8.1e-131 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GAMOKDAL_03967 1.5e-204 fsr P COG0477 Permeases of the major facilitator superfamily
GAMOKDAL_03968 3.9e-189 yfnD M Nucleotide-diphospho-sugar transferase
GAMOKDAL_03969 1.2e-224 yfnE 2.4.1.338 GT2 S Glycosyltransferase like family 2
GAMOKDAL_03970 5.1e-178 yfnF M Nucleotide-diphospho-sugar transferase
GAMOKDAL_03971 3.2e-172 yfnG 4.2.1.45 M dehydratase
GAMOKDAL_03972 7.4e-146 rfbF 2.7.7.33 JM Nucleotidyl transferase
GAMOKDAL_03973 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
GAMOKDAL_03974 0.0 cypD 1.14.14.1, 1.6.2.4 C Belongs to the cytochrome P450 family
GAMOKDAL_03975 3e-193 yetN S Protein of unknown function (DUF3900)
GAMOKDAL_03977 3e-209 yetM CH FAD binding domain
GAMOKDAL_03978 2.1e-88 yetL K helix_turn_helix multiple antibiotic resistance protein
GAMOKDAL_03979 1.2e-158 yetK EG EamA-like transporter family
GAMOKDAL_03980 5.3e-105 yetJ S Belongs to the BI1 family
GAMOKDAL_03981 8.9e-20 yezD S Uncharacterized small protein (DUF2292)
GAMOKDAL_03982 1.9e-145 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
GAMOKDAL_03983 2.4e-34
GAMOKDAL_03984 2e-64 yetH E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GAMOKDAL_03985 4.4e-55 isdI 1.14.99.48, 1.14.99.57 S Antibiotic biosynthesis monooxygenase
GAMOKDAL_03986 5.2e-122 yetF S membrane
GAMOKDAL_03987 7.1e-253 lplD 3.2.1.122, 3.2.1.22, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase
GAMOKDAL_03988 1.7e-162 lplC G Binding-protein-dependent transport system inner membrane component
GAMOKDAL_03989 3.2e-175 lplB G COG4209 ABC-type polysaccharide transport system, permease component
GAMOKDAL_03990 9e-289 lplA G Bacterial extracellular solute-binding protein
GAMOKDAL_03991 0.0 yetA
GAMOKDAL_03992 0.0 yesZ 3.2.1.23 G beta-galactosidase activity
GAMOKDAL_03993 2e-123 yesY E GDSL-like Lipase/Acylhydrolase
GAMOKDAL_03994 0.0 yesX 4.2.2.23, 4.2.2.24 PL11 E cell wall organization
GAMOKDAL_03995 0.0 yesX 4.2.2.23, 4.2.2.24 PL11 E cell wall organization
GAMOKDAL_03996 3.9e-113 yesV S Protein of unknown function, DUF624
GAMOKDAL_03997 2.1e-125 yesU S Domain of unknown function (DUF1961)
GAMOKDAL_03998 3e-130 E GDSL-like Lipase/Acylhydrolase
GAMOKDAL_03999 0.0 yesS K Transcriptional regulator
GAMOKDAL_04000 2.3e-198 3.2.1.172 GH105 S Glycosyl Hydrolase Family 88
GAMOKDAL_04001 1.2e-163 yesQ P Binding-protein-dependent transport system inner membrane component
GAMOKDAL_04002 2.8e-171 yesP G Binding-protein-dependent transport system inner membrane component
GAMOKDAL_04003 1.2e-246 yesO G Bacterial extracellular solute-binding protein
GAMOKDAL_04004 5.2e-201 yesN K helix_turn_helix, arabinose operon control protein
GAMOKDAL_04005 0.0 yesM 2.7.13.3 T Histidine kinase
GAMOKDAL_04006 1.2e-101 yesL S Protein of unknown function, DUF624
GAMOKDAL_04008 1.3e-101 yesJ K Acetyltransferase (GNAT) family
GAMOKDAL_04009 5.2e-104 cotJC P Spore Coat
GAMOKDAL_04010 1.5e-45 cotJB S CotJB protein
GAMOKDAL_04011 5.3e-45 cotJA S Spore coat associated protein JA (CotJA)
GAMOKDAL_04012 2.5e-150 yesF GM NAD(P)H-binding
GAMOKDAL_04013 2.6e-79 yesE S SnoaL-like domain
GAMOKDAL_04014 8.2e-101 dhaR3 K Transcriptional regulator
GAMOKDAL_04016 2.7e-126 yeeN K transcriptional regulatory protein
GAMOKDAL_04018 8.5e-207 S Tetratricopeptide repeat
GAMOKDAL_04019 4e-179 3.4.24.40 CO amine dehydrogenase activity
GAMOKDAL_04020 0.0 L nucleic acid phosphodiester bond hydrolysis
GAMOKDAL_04021 3e-81 S Protein of unknown function, DUF600
GAMOKDAL_04022 6.1e-35
GAMOKDAL_04023 4.1e-256 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GAMOKDAL_04024 3e-170 yegS 2.7.1.107 I COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
GAMOKDAL_04025 0.0 swrC V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GAMOKDAL_04026 2.1e-146 yerO K Transcriptional regulator
GAMOKDAL_04027 3.1e-270 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GAMOKDAL_04028 7.9e-274 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
GAMOKDAL_04029 2.1e-45 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GAMOKDAL_04030 3.2e-262 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GAMOKDAL_04031 1.6e-123 sapB S MgtC SapB transporter
GAMOKDAL_04032 3.2e-197 yerI S homoserine kinase type II (protein kinase fold)
GAMOKDAL_04033 7e-220 camS S COG4851 Protein involved in sex pheromone biosynthesis
GAMOKDAL_04034 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GAMOKDAL_04035 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
GAMOKDAL_04036 2.2e-125 pcrB I 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
GAMOKDAL_04038 1e-303 yerD 1.4.7.1 E Belongs to the glutamate synthase family
GAMOKDAL_04039 2.4e-50 yerC S protein conserved in bacteria
GAMOKDAL_04040 1.8e-189 yerB S Protein of unknown function (DUF3048) C-terminal domain
GAMOKDAL_04041 0.0 yerA 3.5.4.2 F adenine deaminase
GAMOKDAL_04042 2.7e-27 S Protein of unknown function (DUF2892)
GAMOKDAL_04043 4.4e-228 yjeH E Amino acid permease
GAMOKDAL_04044 1e-72 K helix_turn_helix ASNC type
GAMOKDAL_04045 5.9e-233 purD 6.3.4.13 F Belongs to the GARS family
GAMOKDAL_04046 3e-287 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
GAMOKDAL_04047 8.3e-105 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
GAMOKDAL_04048 3.8e-177 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
GAMOKDAL_04049 3.6e-271 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
GAMOKDAL_04050 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GAMOKDAL_04051 5.1e-130 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GAMOKDAL_04052 2.9e-38 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GAMOKDAL_04053 3.1e-130 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
GAMOKDAL_04054 2.8e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
GAMOKDAL_04055 6.6e-215 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GAMOKDAL_04056 2.5e-83 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
GAMOKDAL_04057 8e-28 yebG S NETI protein
GAMOKDAL_04058 8.9e-93 yebE S UPF0316 protein
GAMOKDAL_04060 4.4e-117 yebC M Membrane
GAMOKDAL_04061 1e-211 pbuG S permease
GAMOKDAL_04062 3.3e-256 S Domain of unknown function (DUF4179)
GAMOKDAL_04063 1.2e-83 K Belongs to the sigma-70 factor family. ECF subfamily
GAMOKDAL_04064 8.3e-306 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
GAMOKDAL_04065 0.0 yebA E COG1305 Transglutaminase-like enzymes
GAMOKDAL_04066 5.8e-222 yeaD S conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
GAMOKDAL_04067 1.9e-175 yeaC S COG0714 MoxR-like ATPases
GAMOKDAL_04068 3.8e-154 yeaB P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GAMOKDAL_04069 4.4e-253 gabP E COG1113 Gamma-aminobutyrate permease and related permeases
GAMOKDAL_04070 0.0 cotA 1.10.3.4, 1.16.3.3 Q multicopper oxidases
GAMOKDAL_04071 4.8e-174 yeaA S Protein of unknown function (DUF4003)
GAMOKDAL_04072 3.8e-156 ydjP I Alpha/beta hydrolase family
GAMOKDAL_04073 1.4e-34 ydjO S Cold-inducible protein YdjO
GAMOKDAL_04075 2.1e-151 ydjN U Involved in the tonB-independent uptake of proteins
GAMOKDAL_04076 4.5e-64 ydjM M Lytic transglycolase
GAMOKDAL_04077 5.2e-195 bdhA 1.1.1.303, 1.1.1.4 E Dehydrogenase
GAMOKDAL_04078 2.3e-257 iolT EGP Major facilitator Superfamily
GAMOKDAL_04079 3e-195 S Ion transport 2 domain protein
GAMOKDAL_04080 4.1e-149 ydjI S virion core protein (lumpy skin disease virus)
GAMOKDAL_04081 4.9e-134 ydjH S COG1512 Beta-propeller domains of methanol dehydrogenase type
GAMOKDAL_04082 3.7e-177 ydjG 3.6.4.12 L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GAMOKDAL_04083 4.3e-113 pspA KT Phage shock protein A
GAMOKDAL_04084 7.5e-172 ydjE 2.7.1.4 G pfkB family carbohydrate kinase
GAMOKDAL_04085 3.3e-253 gutA G MFS/sugar transport protein
GAMOKDAL_04086 9.4e-200 gutB 1.1.1.14 E Dehydrogenase
GAMOKDAL_04087 0.0 K NB-ARC domain
GAMOKDAL_04088 3.6e-153 ydjC S Abhydrolase domain containing 18
GAMOKDAL_04089 2.2e-280 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
GAMOKDAL_04090 1.3e-42 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GAMOKDAL_04091 1.3e-128 ydiL S CAAX protease self-immunity
GAMOKDAL_04092 2.9e-27 ydiK S Domain of unknown function (DUF4305)
GAMOKDAL_04093 7.1e-125 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
GAMOKDAL_04094 7.5e-22 tatA U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
GAMOKDAL_04095 8.8e-116 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
GAMOKDAL_04096 5.5e-89 moaC 4.6.1.17 H Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
GAMOKDAL_04097 0.0 ydiF S ABC transporter
GAMOKDAL_04098 1.4e-187 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GAMOKDAL_04099 1.3e-84 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
GAMOKDAL_04100 9e-127 yeaZ 2.3.1.234 O COG1214 Inactive homolog of metal-dependent proteases
GAMOKDAL_04101 1.2e-85 ydiB 2.7.1.221, 5.1.1.1 S ATPase or kinase
GAMOKDAL_04102 5.8e-180 thiL 2.7.4.16 H Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
GAMOKDAL_04104 7.8e-08
GAMOKDAL_04105 3.4e-39 S COG NOG14552 non supervised orthologous group
GAMOKDAL_04106 2.5e-180 yaaC S YaaC-like Protein
GAMOKDAL_04107 1.8e-273 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
GAMOKDAL_04108 6.8e-248 dacA 3.4.16.4 M Belongs to the peptidase S11 family
GAMOKDAL_04109 2.2e-157 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
GAMOKDAL_04110 8e-108 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
GAMOKDAL_04111 8.1e-206 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GAMOKDAL_04112 1.3e-09
GAMOKDAL_04113 8.3e-122 dck 2.7.1.113, 2.7.1.74, 2.7.1.76 F Deoxycytidine kinase
GAMOKDAL_04114 7.9e-114 dgk 2.7.1.113, 2.7.1.74, 2.7.1.76 F Deoxyguanosine kinase
GAMOKDAL_04115 2.4e-213 yaaH M Glycoside Hydrolase Family
GAMOKDAL_04116 5e-96 yaaI Q COG1335 Amidases related to nicotinamidase
GAMOKDAL_04117 1.1e-83 tadA 3.5.4.1, 3.5.4.3, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
GAMOKDAL_04118 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GAMOKDAL_04119 5.3e-37 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
GAMOKDAL_04120 3.9e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GAMOKDAL_04121 7.9e-32 yaaL S Protein of unknown function (DUF2508)
GAMOKDAL_04122 3.7e-36 bofA S Sigma-K factor-processing regulatory protein BofA
GAMOKDAL_04123 3.8e-287 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
GAMOKDAL_04124 8.3e-190 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GAMOKDAL_04125 4.1e-30 yazB K transcriptional
GAMOKDAL_04126 7.9e-88 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
GAMOKDAL_04127 5.9e-61 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
GAMOKDAL_04128 1.7e-159 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
GAMOKDAL_04129 8.7e-167 pabC 2.6.1.42, 4.1.3.38 EH 4-amino-4-deoxychorismate lyase
GAMOKDAL_04130 9.6e-106 pabA 2.6.1.85, 4.1.3.27 EH Anthranilate synthase
GAMOKDAL_04131 9.1e-267 pabB 2.6.1.85 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
GAMOKDAL_04132 2.6e-169 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
GAMOKDAL_04133 4.4e-158 yacD 5.2.1.8 O peptidyl-prolyl isomerase
GAMOKDAL_04134 2.9e-162 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
GAMOKDAL_04135 1.5e-146 coaX 2.7.1.33 F Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
GAMOKDAL_04136 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GAMOKDAL_04137 7.9e-94 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
GAMOKDAL_04138 6.1e-271 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
GAMOKDAL_04139 3.7e-185 KLT serine threonine protein kinase
GAMOKDAL_04140 1.5e-124 yabS S protein containing a von Willebrand factor type A (vWA) domain
GAMOKDAL_04141 0.0 spoIIE 3.1.3.16, 3.1.3.3 KT stage II sporulation protein E
GAMOKDAL_04144 8.5e-58 yabR J RNA binding protein (contains ribosomal protein S1 domain)
GAMOKDAL_04145 3.6e-45 divIC D Septum formation initiator
GAMOKDAL_04146 9.5e-107 yabQ S spore cortex biosynthesis protein
GAMOKDAL_04147 1.5e-49 yabP S Sporulation protein YabP
GAMOKDAL_04148 1.1e-37 yabO J COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
GAMOKDAL_04149 2.5e-243 mazG 3.6.1.66, 3.6.1.9 S COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like
GAMOKDAL_04150 9.3e-284 yabM S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
GAMOKDAL_04151 1.5e-92 spoVT K stage V sporulation protein
GAMOKDAL_04152 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GAMOKDAL_04153 2.4e-39 yabK S Peptide ABC transporter permease
GAMOKDAL_04154 8e-105 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
GAMOKDAL_04155 3.9e-97 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
GAMOKDAL_04156 9.4e-175 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GAMOKDAL_04157 9.5e-229 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GAMOKDAL_04158 4.6e-48 spoVG D Essential for sporulation. Interferes with or is a negative regulator of the pathway leading to asymmetric septation
GAMOKDAL_04159 3.8e-63 yabJ 3.5.99.10 J translation initiation inhibitor, yjgF family
GAMOKDAL_04160 2.6e-152 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
GAMOKDAL_04161 4.1e-161 ispE 2.1.1.182, 2.7.1.148 I Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
GAMOKDAL_04162 7.8e-39 veg S protein conserved in bacteria
GAMOKDAL_04163 2.8e-136 yabG S peptidase
GAMOKDAL_04164 6.9e-156 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
GAMOKDAL_04165 3e-96 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
GAMOKDAL_04166 2e-167 rpfB GH23 T protein conserved in bacteria
GAMOKDAL_04167 1.2e-143 tatD L hydrolase, TatD
GAMOKDAL_04168 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GAMOKDAL_04169 8.8e-44 abrB K COG2002 Regulators of stationary sporulation gene expression
GAMOKDAL_04170 4.3e-158 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GAMOKDAL_04171 1.5e-49 yazA L endonuclease containing a URI domain
GAMOKDAL_04172 5.5e-138 yabB 2.1.1.223 S Conserved hypothetical protein 95
GAMOKDAL_04173 4.8e-31 yabA L Involved in initiation control of chromosome replication
GAMOKDAL_04174 6.1e-146 yaaT S stage 0 sporulation protein
GAMOKDAL_04175 1.1e-181 holB 2.7.7.7 L DNA polymerase III
GAMOKDAL_04176 1.5e-71 yaaR S protein conserved in bacteria
GAMOKDAL_04177 2.2e-54 yaaQ S protein conserved in bacteria
GAMOKDAL_04178 1.2e-112 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GAMOKDAL_04179 8.7e-273 adiA 4.1.1.17, 4.1.1.18, 4.1.1.19 E Orn Lys Arg decarboxylase
GAMOKDAL_04180 2.2e-202 yaaN P Belongs to the TelA family
GAMOKDAL_04181 3.4e-101 xpaC S 5-bromo-4-chloroindolyl phosphate hydrolysis protein
GAMOKDAL_04182 8.4e-30 csfB S Inhibitor of sigma-G Gin

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)