ORF_ID e_value Gene_name EC_number CAZy COGs Description
PNICKBOB_00001 4.3e-88 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PNICKBOB_00002 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PNICKBOB_00003 2.4e-124 metF 1.5.1.20 C Methylenetetrahydrofolate reductase
PNICKBOB_00004 3.6e-108 L Transposase and inactivated derivatives, IS30 family
PNICKBOB_00005 4.3e-184 P secondary active sulfate transmembrane transporter activity
PNICKBOB_00006 6.7e-96 apt 2.4.2.22, 2.4.2.7 F Phosphoribosyl transferase domain
PNICKBOB_00007 1.2e-138 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_00008 1.8e-72 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_00009 1.1e-204 L COG3547 Transposase and inactivated derivatives
PNICKBOB_00010 1.8e-90 bioY S BioY family
PNICKBOB_00011 1.8e-189 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PNICKBOB_00012 4.4e-135 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
PNICKBOB_00013 3.1e-144 accA 2.1.3.15, 6.4.1.2 I alpha subunit
PNICKBOB_00014 3.9e-156 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PNICKBOB_00015 2.5e-261 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
PNICKBOB_00016 2.7e-73 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
PNICKBOB_00017 3.7e-79 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PNICKBOB_00018 1.6e-230 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PNICKBOB_00019 8.6e-128 IQ reductase
PNICKBOB_00020 2e-169 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
PNICKBOB_00021 1.4e-34 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PNICKBOB_00022 4.5e-180 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PNICKBOB_00023 9.6e-80 marR K Transcriptional regulator
PNICKBOB_00024 3.8e-78 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PNICKBOB_00025 1.5e-187 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
PNICKBOB_00026 1.8e-13 ytgB S Transglycosylase associated protein
PNICKBOB_00027 6.2e-79 L Resolvase, N terminal domain
PNICKBOB_00028 1.6e-130 L Transposase
PNICKBOB_00029 2.1e-64 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_00030 2.8e-157 glcU U sugar transport
PNICKBOB_00031 1.5e-68 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_00032 8e-117 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_00033 1.5e-15 NU Mycoplasma protein of unknown function, DUF285
PNICKBOB_00034 8.1e-81 S Domain of unknown function (DUF4430)
PNICKBOB_00035 9.3e-184 U FFAT motif binding
PNICKBOB_00036 1.2e-132 S Domain of unknown function (DUF4430)
PNICKBOB_00037 1.1e-259 S Uncharacterised protein family (UPF0236)
PNICKBOB_00039 4.1e-156 P ABC-type cobalt transport system permease component CbiQ and related transporters
PNICKBOB_00040 0.0 ykoD_2 S AAA domain, putative AbiEii toxin, Type IV TA system
PNICKBOB_00041 8.7e-125 S ECF-type riboflavin transporter, S component
PNICKBOB_00042 4.5e-55 U FFAT motif binding
PNICKBOB_00043 1.2e-39 eutP E Ethanolamine utilisation - propanediol utilisation
PNICKBOB_00044 4e-33 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_00045 2e-236 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_00046 6.7e-259 ykgC 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
PNICKBOB_00047 3.4e-57 L Psort location Cytoplasmic, score
PNICKBOB_00048 8e-151 cbiO2 P ABC transporter
PNICKBOB_00049 7e-158 P ABC transporter
PNICKBOB_00050 4.4e-133 cbiQ P Cobalt transport protein
PNICKBOB_00051 1.3e-89 2.7.7.65 T phosphorelay sensor kinase activity
PNICKBOB_00052 1.8e-32 M NlpC/P60 family
PNICKBOB_00053 5.3e-124 L Transposase and inactivated derivatives, IS30 family
PNICKBOB_00054 1.6e-222 oxlT P Major Facilitator Superfamily
PNICKBOB_00055 5.9e-42 L Helix-turn-helix domain
PNICKBOB_00056 2.8e-179 yvdE K helix_turn _helix lactose operon repressor
PNICKBOB_00057 5.2e-147 ptp2 3.1.3.48 T Tyrosine phosphatase family
PNICKBOB_00058 1.8e-51 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PNICKBOB_00059 1.8e-90 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PNICKBOB_00060 6.9e-84 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PNICKBOB_00061 5.6e-152 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PNICKBOB_00063 1.9e-132 cobQ S glutamine amidotransferase
PNICKBOB_00064 7.3e-269 L COG2963 Transposase and inactivated derivatives
PNICKBOB_00065 9.5e-83 M NlpC/P60 family
PNICKBOB_00066 4.4e-138 EG EamA-like transporter family
PNICKBOB_00067 1e-108
PNICKBOB_00068 8.8e-35
PNICKBOB_00069 3.9e-72 L IS1381, transposase OrfA
PNICKBOB_00070 3.2e-24
PNICKBOB_00071 1e-105 XK27_05540 S DUF218 domain
PNICKBOB_00072 6.4e-57 XK27_05540 S DUF218 domain
PNICKBOB_00073 1.3e-70 yheS_2 S ATPases associated with a variety of cellular activities
PNICKBOB_00074 2.2e-74 yheS_2 S ATPases associated with a variety of cellular activities
PNICKBOB_00075 2.8e-87
PNICKBOB_00076 2.1e-58
PNICKBOB_00077 1.1e-245 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PNICKBOB_00078 6.4e-251 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PNICKBOB_00079 1.3e-184 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PNICKBOB_00082 4.8e-204 4.2.1.126 S Bacterial protein of unknown function (DUF871)
PNICKBOB_00083 6.3e-162 L An automated process has identified a potential problem with this gene model
PNICKBOB_00084 4.3e-194 asnA 6.3.1.1 F aspartate--ammonia ligase
PNICKBOB_00085 6.7e-50 S YcaO cyclodehydratase, ATP-ad Mg2+-binding
PNICKBOB_00086 6.3e-162 L An automated process has identified a potential problem with this gene model
PNICKBOB_00087 5.1e-38 S YcaO cyclodehydratase, ATP-ad Mg2+-binding
PNICKBOB_00088 2e-163 L An automated process has identified a potential problem with this gene model
PNICKBOB_00089 3.9e-246 yifK E Amino acid permease
PNICKBOB_00090 1.1e-221 cycA E Amino acid permease
PNICKBOB_00091 2.4e-128
PNICKBOB_00092 4.9e-119 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PNICKBOB_00093 0.0 clpE O AAA domain (Cdc48 subfamily)
PNICKBOB_00094 1.4e-170 S Alpha/beta hydrolase of unknown function (DUF915)
PNICKBOB_00095 8.7e-213 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PNICKBOB_00096 5.8e-118 XK27_06785 V ABC transporter, ATP-binding protein
PNICKBOB_00097 3.5e-203 XK27_06780 V ABC transporter permease
PNICKBOB_00098 7.2e-143 XK27_06780 V ABC transporter permease
PNICKBOB_00099 4.8e-27
PNICKBOB_00100 2.4e-153 L An automated process has identified a potential problem with this gene model
PNICKBOB_00101 8.9e-156 ropB K Transcriptional regulator
PNICKBOB_00102 1.9e-204 XK27_02480 EGP Major facilitator Superfamily
PNICKBOB_00103 4e-13 sagD S ATP diphosphatase activity
PNICKBOB_00106 1.1e-80 GM NAD(P)H-binding
PNICKBOB_00107 3.2e-121 C Aldo keto reductase
PNICKBOB_00108 1.6e-136 akr5f 1.1.1.346 S reductase
PNICKBOB_00109 1.7e-34 S Domain of unknown function (DUF4440)
PNICKBOB_00110 2.2e-10 K Bacterial regulatory proteins, tetR family
PNICKBOB_00111 4.9e-43 K Bacterial regulatory proteins, tetR family
PNICKBOB_00112 5.7e-273 ytgP S Polysaccharide biosynthesis protein
PNICKBOB_00113 1.4e-145 lysA2 M Glycosyl hydrolases family 25
PNICKBOB_00114 7.3e-21 S Protein of unknown function (DUF975)
PNICKBOB_00115 1e-93 S Protein of unknown function (DUF975)
PNICKBOB_00116 2.6e-49
PNICKBOB_00117 1e-16
PNICKBOB_00118 2.1e-126 S CAAX protease self-immunity
PNICKBOB_00119 5e-09
PNICKBOB_00121 3.2e-175 pbpX2 V Beta-lactamase
PNICKBOB_00122 3.5e-249 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PNICKBOB_00123 5.7e-36 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PNICKBOB_00124 2.9e-240 dltB M MBOAT, membrane-bound O-acyltransferase family
PNICKBOB_00125 7.2e-294 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PNICKBOB_00126 5.2e-19 S D-Ala-teichoic acid biosynthesis protein
PNICKBOB_00127 3.8e-50
PNICKBOB_00128 1e-215 ywhK S Membrane
PNICKBOB_00129 5.6e-25 ykuL S IMP dehydrogenase activity
PNICKBOB_00130 2.2e-221 L transposase, IS605 OrfB family
PNICKBOB_00131 0.0 cadA P P-type ATPase
PNICKBOB_00132 2e-203 napA P Sodium/hydrogen exchanger family
PNICKBOB_00133 1.5e-49 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PNICKBOB_00134 1.6e-47 S YoeB-like toxin of bacterial type II toxin-antitoxin system
PNICKBOB_00135 6.5e-282 V ABC transporter transmembrane region
PNICKBOB_00136 1.1e-78 S Putative adhesin
PNICKBOB_00137 5.9e-160 mutR K Helix-turn-helix XRE-family like proteins
PNICKBOB_00138 6.4e-47
PNICKBOB_00139 4.6e-120 S CAAX protease self-immunity
PNICKBOB_00140 8.6e-196 S DUF218 domain
PNICKBOB_00141 1.2e-12 macB_3 V ABC transporter, ATP-binding protein
PNICKBOB_00142 0.0 macB_3 V ABC transporter, ATP-binding protein
PNICKBOB_00143 1.5e-16 macB_3 V ABC transporter, ATP-binding protein
PNICKBOB_00144 8e-95 S ECF transporter, substrate-specific component
PNICKBOB_00145 5.2e-161 yeaE S Aldo/keto reductase family
PNICKBOB_00146 1.4e-133 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PNICKBOB_00147 6.9e-22 ybbH_2 K rpiR family
PNICKBOB_00148 2.7e-205 L transposase, IS605 OrfB family
PNICKBOB_00149 1.4e-14 ybbH_2 K rpiR family
PNICKBOB_00150 1.1e-195 L COG2826 Transposase and inactivated derivatives, IS30 family
PNICKBOB_00152 5.5e-118 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PNICKBOB_00153 1.4e-127 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PNICKBOB_00154 3.2e-92 cof S haloacid dehalogenase-like hydrolase
PNICKBOB_00155 3.5e-32 cof S haloacid dehalogenase-like hydrolase
PNICKBOB_00156 3.5e-228 pbuG S permease
PNICKBOB_00157 2.2e-174 S cog cog1373
PNICKBOB_00158 1e-215 L transposase, IS605 OrfB family
PNICKBOB_00159 3.2e-10 S cog cog1373
PNICKBOB_00160 1.7e-111 K helix_turn_helix, mercury resistance
PNICKBOB_00161 1.2e-231 pbuG S permease
PNICKBOB_00162 7.5e-73 S Uncharacterised protein family (UPF0236)
PNICKBOB_00163 8.4e-63 S Uncharacterised protein family (UPF0236)
PNICKBOB_00164 3.9e-44 S Uncharacterised protein family (UPF0236)
PNICKBOB_00165 3.6e-241 amtB P ammonium transporter
PNICKBOB_00166 4.5e-36 S Uncharacterised protein family (UPF0236)
PNICKBOB_00167 5.2e-224 pbuG S permease
PNICKBOB_00168 2.3e-35
PNICKBOB_00169 3.5e-76 atkY K Penicillinase repressor
PNICKBOB_00170 1.2e-64 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PNICKBOB_00171 1.4e-49 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PNICKBOB_00172 0.0 copA 3.6.3.54 P P-type ATPase
PNICKBOB_00173 7.7e-37 EGP Sugar (and other) transporter
PNICKBOB_00174 3.4e-156 EGP Sugar (and other) transporter
PNICKBOB_00175 1.2e-18
PNICKBOB_00176 1.7e-212
PNICKBOB_00177 8.4e-290 clcA P chloride
PNICKBOB_00178 2.2e-273 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PNICKBOB_00179 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PNICKBOB_00180 5.6e-253 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PNICKBOB_00181 6.4e-146 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PNICKBOB_00182 2.7e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PNICKBOB_00183 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PNICKBOB_00184 6.8e-259 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PNICKBOB_00185 3.9e-196 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PNICKBOB_00186 1.3e-34 yaaA S S4 domain protein YaaA
PNICKBOB_00187 1.1e-209 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PNICKBOB_00188 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PNICKBOB_00189 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PNICKBOB_00190 4.2e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
PNICKBOB_00191 3.1e-79 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PNICKBOB_00192 1.9e-33 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PNICKBOB_00193 9e-195 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_00194 1.9e-175 V ABC transporter transmembrane region
PNICKBOB_00195 1.7e-19 KLT serine threonine protein kinase
PNICKBOB_00196 3.9e-72 L IS1381, transposase OrfA
PNICKBOB_00197 2.4e-34 KLT Protein kinase domain
PNICKBOB_00198 3.9e-72 L IS1381, transposase OrfA
PNICKBOB_00199 2.8e-279 KLT Protein kinase domain
PNICKBOB_00200 4e-74 L COG2826 Transposase and inactivated derivatives, IS30 family
PNICKBOB_00201 9.8e-64 S SLAP domain
PNICKBOB_00202 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PNICKBOB_00203 4.3e-69 rplI J Binds to the 23S rRNA
PNICKBOB_00204 1.2e-255 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PNICKBOB_00205 6.3e-162 L An automated process has identified a potential problem with this gene model
PNICKBOB_00206 3.4e-169 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
PNICKBOB_00207 3.3e-229 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_00208 2.7e-174 degV S DegV family
PNICKBOB_00209 3.8e-170 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PNICKBOB_00211 4.7e-36
PNICKBOB_00212 2.8e-240 I Protein of unknown function (DUF2974)
PNICKBOB_00213 7e-36 L Transposase
PNICKBOB_00214 2.6e-177 L Transposase
PNICKBOB_00215 0.0 L Transposase
PNICKBOB_00216 2e-121 yhiD S MgtC family
PNICKBOB_00218 7.9e-140 K Helix-turn-helix XRE-family like proteins
PNICKBOB_00219 2.6e-74
PNICKBOB_00220 1.2e-103
PNICKBOB_00221 6.1e-143 D Ftsk spoiiie family protein
PNICKBOB_00222 3e-145 S Replication initiation factor
PNICKBOB_00223 1.1e-57
PNICKBOB_00224 1.6e-27
PNICKBOB_00225 4e-234 L Belongs to the 'phage' integrase family
PNICKBOB_00228 5.6e-09
PNICKBOB_00229 9.9e-247 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
PNICKBOB_00230 3.9e-72 L IS1381, transposase OrfA
PNICKBOB_00231 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
PNICKBOB_00232 9.4e-276 hsdM 2.1.1.72 V type I restriction-modification system
PNICKBOB_00233 5.5e-82 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
PNICKBOB_00234 6.5e-159 L An automated process has identified a potential problem with this gene model
PNICKBOB_00235 9.5e-71 S SLAP domain
PNICKBOB_00236 9.1e-19 S Uncharacterised protein family (UPF0236)
PNICKBOB_00237 7.8e-227 S Uncharacterised protein family (UPF0236)
PNICKBOB_00238 7.6e-112 ybbL S ABC transporter, ATP-binding protein
PNICKBOB_00239 1.1e-130 ybbM S Uncharacterised protein family (UPF0014)
PNICKBOB_00240 7.6e-139 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PNICKBOB_00241 3e-23 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PNICKBOB_00242 2.3e-107 K Bacterial regulatory proteins, tetR family
PNICKBOB_00243 3.3e-255 V Restriction endonuclease
PNICKBOB_00244 2e-25 pipD E Dipeptidase
PNICKBOB_00245 2.9e-102 pipD E Dipeptidase
PNICKBOB_00246 4.2e-45 pipD E Dipeptidase
PNICKBOB_00247 2e-234 S LPXTG cell wall anchor motif
PNICKBOB_00248 1.6e-148 S Putative ABC-transporter type IV
PNICKBOB_00249 1.3e-99 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S cob(I)alamin adenosyltransferase
PNICKBOB_00250 5.3e-87 S ECF transporter, substrate-specific component
PNICKBOB_00251 7.5e-57 S Domain of unknown function (DUF4430)
PNICKBOB_00252 0.0 rtpR 1.1.98.6, 1.17.4.1, 1.17.4.2 F ribonucleoside-triphosphate reductase activity
PNICKBOB_00253 2.2e-177 K AI-2E family transporter
PNICKBOB_00254 6.2e-105 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
PNICKBOB_00255 4.8e-11
PNICKBOB_00256 4.1e-41
PNICKBOB_00257 9.6e-138 XK27_08845 S ABC transporter, ATP-binding protein
PNICKBOB_00258 7.1e-124 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PNICKBOB_00259 5.5e-178 ABC-SBP S ABC transporter
PNICKBOB_00260 3.4e-137 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PNICKBOB_00261 4.7e-19 L Putative transposase DNA-binding domain
PNICKBOB_00262 1.2e-161 L Putative transposase DNA-binding domain
PNICKBOB_00263 1.5e-07 S SLAP domain
PNICKBOB_00264 1.3e-190 S SLAP domain
PNICKBOB_00265 1.4e-164 yvgN C Aldo keto reductase
PNICKBOB_00266 2.9e-17 tetP J elongation factor G
PNICKBOB_00267 0.0 tetP J elongation factor G
PNICKBOB_00268 6.2e-151 3.1.3.102, 3.1.3.104, 3.1.3.23 S haloacid dehalogenase-like hydrolase
PNICKBOB_00269 6.9e-192 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PNICKBOB_00270 1.4e-169 yniA G Phosphotransferase enzyme family
PNICKBOB_00271 7.4e-55 L Probable transposase
PNICKBOB_00272 4e-184 L Probable transposase
PNICKBOB_00273 5.9e-106 L Resolvase, N terminal domain
PNICKBOB_00274 3.3e-160 xth 3.1.11.2 L exodeoxyribonuclease III
PNICKBOB_00275 2.4e-128 E amino acid
PNICKBOB_00276 2e-100 L Helicase C-terminal domain protein
PNICKBOB_00277 3.9e-72 L IS1381, transposase OrfA
PNICKBOB_00278 0.0 L Helicase C-terminal domain protein
PNICKBOB_00279 3.9e-195 pbpX1 V Beta-lactamase
PNICKBOB_00280 1e-69 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PNICKBOB_00281 5.3e-79
PNICKBOB_00282 2.4e-83 S COG NOG38524 non supervised orthologous group
PNICKBOB_00284 1.3e-40 K LysR substrate binding domain
PNICKBOB_00285 5.1e-63 K LysR substrate binding domain
PNICKBOB_00286 1e-07 K LysR substrate binding domain
PNICKBOB_00287 6.5e-108 K Transcriptional regulator, LysR family
PNICKBOB_00288 4.4e-35 S Cytochrome b5
PNICKBOB_00289 6.6e-167 arbZ I Phosphate acyltransferases
PNICKBOB_00290 5.9e-157 arbY M Glycosyl transferase family 8
PNICKBOB_00291 3.7e-10 arbY M Glycosyl transferase family 8
PNICKBOB_00292 2.2e-187 arbY M Glycosyl transferase family 8
PNICKBOB_00293 4.1e-158 arbx M Glycosyl transferase family 8
PNICKBOB_00294 4e-13 K Helix-turn-helix domain
PNICKBOB_00295 2.1e-120 K Helix-turn-helix domain
PNICKBOB_00296 1.9e-14
PNICKBOB_00297 4.5e-67
PNICKBOB_00298 7.8e-148 arbV 2.3.1.51 I Acyl-transferase
PNICKBOB_00299 2.7e-197 S SLAP domain
PNICKBOB_00300 1.5e-135
PNICKBOB_00301 2e-166 S SLAP domain
PNICKBOB_00302 6.7e-11 L Transposase
PNICKBOB_00304 2.4e-33
PNICKBOB_00306 2.2e-131 K response regulator
PNICKBOB_00307 1.4e-307 vicK 2.7.13.3 T Histidine kinase
PNICKBOB_00308 1.2e-244 yycH S YycH protein
PNICKBOB_00309 6.9e-150 yycI S YycH protein
PNICKBOB_00310 3.3e-149 vicX 3.1.26.11 S domain protein
PNICKBOB_00311 1.5e-180 htrA 3.4.21.107 O serine protease
PNICKBOB_00312 1.5e-91 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PNICKBOB_00313 6.6e-31 K Helix-turn-helix XRE-family like proteins
PNICKBOB_00314 8.6e-187 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_00315 2.7e-176 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
PNICKBOB_00316 1.4e-92 P Cobalt transport protein
PNICKBOB_00317 3.9e-251 cbiO1 S ABC transporter, ATP-binding protein
PNICKBOB_00318 5.1e-173 K helix_turn_helix, arabinose operon control protein
PNICKBOB_00319 6.4e-60 L hmm pf00665
PNICKBOB_00320 5.6e-08 L hmm pf00665
PNICKBOB_00321 7e-19 L hmm pf00665
PNICKBOB_00322 3.7e-66 L Helix-turn-helix domain
PNICKBOB_00323 1.5e-161 htpX O Belongs to the peptidase M48B family
PNICKBOB_00324 2.3e-96 lemA S LemA family
PNICKBOB_00325 1e-193 ybiR P Citrate transporter
PNICKBOB_00326 5.9e-70 S Iron-sulphur cluster biosynthesis
PNICKBOB_00327 1.9e-16 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
PNICKBOB_00328 1.2e-17
PNICKBOB_00329 1e-151
PNICKBOB_00330 2.1e-59 L transposase, IS605 OrfB family
PNICKBOB_00331 1.1e-124 L transposase, IS605 OrfB family
PNICKBOB_00332 2e-23 G Glycosyl hydrolases family 8
PNICKBOB_00333 4.4e-64 G Glycosyl hydrolases family 8
PNICKBOB_00334 4.7e-17 S Peptidase propeptide and YPEB domain
PNICKBOB_00336 1e-150 L An automated process has identified a potential problem with this gene model
PNICKBOB_00338 2.2e-122 yfbR S HD containing hydrolase-like enzyme
PNICKBOB_00339 2.4e-161 L HNH nucleases
PNICKBOB_00340 3.3e-138 glnQ E ABC transporter, ATP-binding protein
PNICKBOB_00341 1.9e-136 glnP P ABC transporter permease
PNICKBOB_00342 3.9e-72 L IS1381, transposase OrfA
PNICKBOB_00343 1.5e-147 glnP P ABC transporter permease
PNICKBOB_00344 3.3e-123 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PNICKBOB_00345 8.2e-63 yeaO S Protein of unknown function, DUF488
PNICKBOB_00346 3.8e-121 terC P Integral membrane protein TerC family
PNICKBOB_00347 6.4e-93 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
PNICKBOB_00348 6.6e-133 cobB K SIR2 family
PNICKBOB_00349 3.5e-85
PNICKBOB_00350 4.5e-285 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PNICKBOB_00351 1e-178 S Alpha/beta hydrolase of unknown function (DUF915)
PNICKBOB_00352 5.6e-146 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PNICKBOB_00353 0.0 L Transposase
PNICKBOB_00354 5.8e-234 L COG2963 Transposase and inactivated derivatives
PNICKBOB_00355 2e-140 ypuA S Protein of unknown function (DUF1002)
PNICKBOB_00356 3.4e-149 epsV 2.7.8.12 S glycosyl transferase family 2
PNICKBOB_00357 3.3e-126 S Alpha/beta hydrolase family
PNICKBOB_00358 7.8e-117 GM NmrA-like family
PNICKBOB_00359 4.7e-65
PNICKBOB_00360 1.8e-181 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PNICKBOB_00361 1.7e-122 luxT K Bacterial regulatory proteins, tetR family
PNICKBOB_00362 1e-129
PNICKBOB_00363 7.1e-262 glnPH2 P ABC transporter permease
PNICKBOB_00364 8.1e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PNICKBOB_00365 2.2e-232 S Cysteine-rich secretory protein family
PNICKBOB_00366 4.7e-207 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PNICKBOB_00367 7.7e-92
PNICKBOB_00368 9.7e-203 yibE S overlaps another CDS with the same product name
PNICKBOB_00369 2.6e-130 yibF S overlaps another CDS with the same product name
PNICKBOB_00370 1.9e-160 I alpha/beta hydrolase fold
PNICKBOB_00371 5.7e-29
PNICKBOB_00372 0.0 G Belongs to the glycosyl hydrolase 31 family
PNICKBOB_00373 2e-163 L An automated process has identified a potential problem with this gene model
PNICKBOB_00374 5.7e-80 ntd 2.4.2.6 F Nucleoside
PNICKBOB_00375 4.9e-90 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PNICKBOB_00376 2.6e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
PNICKBOB_00377 8.5e-87 uspA T universal stress protein
PNICKBOB_00378 8.4e-152 phnD P Phosphonate ABC transporter
PNICKBOB_00379 5.2e-139 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PNICKBOB_00380 9.1e-131 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PNICKBOB_00381 1.2e-149 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PNICKBOB_00382 2e-108 tag 3.2.2.20 L glycosylase
PNICKBOB_00383 8.7e-84
PNICKBOB_00384 4.9e-273 S Calcineurin-like phosphoesterase
PNICKBOB_00385 0.0 asnB 6.3.5.4 E Asparagine synthase
PNICKBOB_00386 1.4e-253 yxbA 6.3.1.12 S ATP-grasp enzyme
PNICKBOB_00389 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PNICKBOB_00390 4.3e-140 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PNICKBOB_00391 7e-101 S Iron-sulfur cluster assembly protein
PNICKBOB_00392 6.1e-232 XK27_04775 S PAS domain
PNICKBOB_00393 2.1e-227 yttB EGP Major facilitator Superfamily
PNICKBOB_00394 0.0 pepO 3.4.24.71 O Peptidase family M13
PNICKBOB_00395 0.0 kup P Transport of potassium into the cell
PNICKBOB_00396 6.6e-75
PNICKBOB_00398 6.7e-28
PNICKBOB_00399 1.4e-16 S Protein of unknown function (DUF2922)
PNICKBOB_00400 9e-171 S SLAP domain
PNICKBOB_00402 2.8e-10 K DNA-templated transcription, initiation
PNICKBOB_00403 9.8e-12 K DNA-templated transcription, initiation
PNICKBOB_00404 3.3e-99
PNICKBOB_00405 3.5e-222 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PNICKBOB_00406 2.5e-208 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
PNICKBOB_00407 0.0 yjbQ P TrkA C-terminal domain protein
PNICKBOB_00408 2.8e-117 gepA K Protein of unknown function (DUF4065)
PNICKBOB_00409 7.5e-180 S Oxidoreductase family, NAD-binding Rossmann fold
PNICKBOB_00410 3e-118
PNICKBOB_00411 4.6e-132
PNICKBOB_00412 5e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PNICKBOB_00413 1.1e-109 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PNICKBOB_00414 5.3e-101 G Aldose 1-epimerase
PNICKBOB_00415 1.5e-200 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PNICKBOB_00416 9.6e-112 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PNICKBOB_00417 0.0 XK27_08315 M Sulfatase
PNICKBOB_00418 1.2e-266 S Fibronectin type III domain
PNICKBOB_00419 4.3e-244 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PNICKBOB_00420 1.2e-53
PNICKBOB_00422 1.6e-257 pepC 3.4.22.40 E aminopeptidase
PNICKBOB_00423 9.8e-123 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PNICKBOB_00424 1.4e-300 oppA E ABC transporter, substratebinding protein
PNICKBOB_00425 0.0 oppA E ABC transporter, substratebinding protein
PNICKBOB_00426 3.4e-211 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PNICKBOB_00427 2.9e-144 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PNICKBOB_00428 4.9e-185 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PNICKBOB_00429 1.3e-201 oppD P Belongs to the ABC transporter superfamily
PNICKBOB_00430 3.2e-175 oppF P Belongs to the ABC transporter superfamily
PNICKBOB_00431 5.8e-234 L COG2963 Transposase and inactivated derivatives
PNICKBOB_00432 1.1e-255 pepC 3.4.22.40 E aminopeptidase
PNICKBOB_00433 4.7e-60 hsp O Belongs to the small heat shock protein (HSP20) family
PNICKBOB_00434 1.8e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PNICKBOB_00435 6.4e-114
PNICKBOB_00437 5.3e-115 E Belongs to the SOS response-associated peptidase family
PNICKBOB_00438 2.8e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PNICKBOB_00439 1.5e-91 comEB 3.5.4.12 F MafB19-like deaminase
PNICKBOB_00440 3.9e-108 S TPM domain
PNICKBOB_00441 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PNICKBOB_00442 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PNICKBOB_00443 7.9e-148 tatD L hydrolase, TatD family
PNICKBOB_00444 5e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PNICKBOB_00445 2.3e-159 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PNICKBOB_00446 1e-38 veg S Biofilm formation stimulator VEG
PNICKBOB_00447 2.4e-150 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
PNICKBOB_00448 1.2e-191 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PNICKBOB_00449 4.5e-47 S SLAP domain
PNICKBOB_00450 1.1e-73 S SLAP domain
PNICKBOB_00451 2.2e-163 L transposase, IS605 OrfB family
PNICKBOB_00452 1.6e-140
PNICKBOB_00453 1.5e-216 S SLAP domain
PNICKBOB_00454 3.5e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PNICKBOB_00455 1.1e-55 2.7.1.2 GK ROK family
PNICKBOB_00456 1.6e-37 GK ROK family
PNICKBOB_00457 5.5e-43
PNICKBOB_00458 1.2e-268 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
PNICKBOB_00459 5.5e-68 S Domain of unknown function (DUF1934)
PNICKBOB_00460 3.3e-55 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PNICKBOB_00461 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PNICKBOB_00462 1.1e-245 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PNICKBOB_00463 1.3e-20 S Haloacid dehalogenase-like hydrolase
PNICKBOB_00464 1.7e-48 S Haloacid dehalogenase-like hydrolase
PNICKBOB_00465 2.2e-284 pipD E Dipeptidase
PNICKBOB_00466 3.7e-159 msmR K AraC-like ligand binding domain
PNICKBOB_00467 1.7e-224 pbuX F xanthine permease
PNICKBOB_00468 7.4e-106 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PNICKBOB_00469 1.6e-106 K DNA-binding helix-turn-helix protein
PNICKBOB_00470 7.8e-219 L transposase, IS605 OrfB family
PNICKBOB_00473 1.2e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PNICKBOB_00475 4e-207 L transposase, IS605 OrfB family
PNICKBOB_00476 4.3e-16 1.1.1.1 C Zinc-binding dehydrogenase
PNICKBOB_00477 8.9e-234 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PNICKBOB_00478 6.1e-155 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_00479 3.9e-68 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_00480 1.4e-98 L Transposase
PNICKBOB_00481 7.4e-74 L Transposase
PNICKBOB_00483 6.6e-204 L Transposase
PNICKBOB_00484 8.7e-309 L Transposase
PNICKBOB_00485 1.7e-159 L An automated process has identified a potential problem with this gene model
PNICKBOB_00486 2.6e-43
PNICKBOB_00487 7.3e-71
PNICKBOB_00488 1.2e-16 S Bacteriocin helveticin-J
PNICKBOB_00489 6.5e-139 S Bacteriocin helveticin-J
PNICKBOB_00490 3.2e-184 S SLAP domain
PNICKBOB_00491 4.6e-70 L transposase, IS605 OrfB family
PNICKBOB_00492 2.8e-137 L Transposase
PNICKBOB_00493 1.6e-157 S Sucrose-6F-phosphate phosphohydrolase
PNICKBOB_00494 1.9e-39 rpmE2 J Ribosomal protein L31
PNICKBOB_00495 5.3e-264 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PNICKBOB_00496 1.9e-254 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PNICKBOB_00497 1.7e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PNICKBOB_00498 5.3e-217 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PNICKBOB_00499 2.8e-91 K transcriptional regulator
PNICKBOB_00500 7.6e-129 S (CBS) domain
PNICKBOB_00501 3.3e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PNICKBOB_00502 1.7e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PNICKBOB_00503 7.2e-192 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PNICKBOB_00504 3.9e-72 L IS1381, transposase OrfA
PNICKBOB_00505 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PNICKBOB_00506 1.8e-34 yabO J S4 domain protein
PNICKBOB_00507 9.8e-59 divIC D Septum formation initiator
PNICKBOB_00508 4.1e-62 yabR J S1 RNA binding domain
PNICKBOB_00509 5.8e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PNICKBOB_00510 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PNICKBOB_00511 9.1e-164 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PNICKBOB_00512 7.3e-269 L COG2963 Transposase and inactivated derivatives
PNICKBOB_00513 2.1e-196 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PNICKBOB_00514 2.4e-300 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PNICKBOB_00516 7.6e-80
PNICKBOB_00517 1.6e-08
PNICKBOB_00519 2.9e-81 yebR 1.8.4.14 T GAF domain-containing protein
PNICKBOB_00520 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PNICKBOB_00521 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PNICKBOB_00522 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PNICKBOB_00523 4.3e-45 L COG2963 Transposase and inactivated derivatives
PNICKBOB_00524 4.9e-103 L COG2963 Transposase and inactivated derivatives
PNICKBOB_00525 1e-122 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
PNICKBOB_00526 7.8e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PNICKBOB_00527 6e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PNICKBOB_00528 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PNICKBOB_00529 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PNICKBOB_00530 6.9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PNICKBOB_00531 2.3e-105 rplD J Forms part of the polypeptide exit tunnel
PNICKBOB_00532 4.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PNICKBOB_00533 1.2e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PNICKBOB_00534 4.2e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PNICKBOB_00535 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PNICKBOB_00536 2e-110 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PNICKBOB_00537 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PNICKBOB_00538 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
PNICKBOB_00539 1.5e-40 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PNICKBOB_00540 8.7e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PNICKBOB_00541 4.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PNICKBOB_00542 1.6e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PNICKBOB_00543 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PNICKBOB_00544 7.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PNICKBOB_00545 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PNICKBOB_00546 2.2e-55 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PNICKBOB_00547 1.8e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PNICKBOB_00548 2.3e-24 rpmD J Ribosomal protein L30
PNICKBOB_00549 1.5e-71 rplO J Binds to the 23S rRNA
PNICKBOB_00550 4e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PNICKBOB_00551 2.7e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PNICKBOB_00552 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PNICKBOB_00553 6.6e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PNICKBOB_00554 5.5e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PNICKBOB_00555 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PNICKBOB_00556 8.1e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PNICKBOB_00557 1.1e-60 rplQ J Ribosomal protein L17
PNICKBOB_00558 2.2e-154 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PNICKBOB_00559 1.5e-152 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PNICKBOB_00560 6.7e-142 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PNICKBOB_00561 4.6e-151 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PNICKBOB_00562 4.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PNICKBOB_00563 1.6e-67 rpsI J Belongs to the universal ribosomal protein uS9 family
PNICKBOB_00564 7.9e-61 S Protein of unknown function (DUF805)
PNICKBOB_00565 1.1e-109 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
PNICKBOB_00566 3.4e-65 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PNICKBOB_00567 9.8e-14 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PNICKBOB_00568 7.1e-133 S membrane transporter protein
PNICKBOB_00569 4e-127 pgm3 G Belongs to the phosphoglycerate mutase family
PNICKBOB_00570 1.3e-162 czcD P cation diffusion facilitator family transporter
PNICKBOB_00571 2.5e-23
PNICKBOB_00572 2.6e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PNICKBOB_00573 4.9e-184 S AAA domain
PNICKBOB_00574 4.3e-217 L transposase, IS605 OrfB family
PNICKBOB_00575 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PNICKBOB_00576 3.5e-25
PNICKBOB_00577 4.8e-146 glcU U sugar transport
PNICKBOB_00578 1.1e-264 pepC 3.4.22.40 E Peptidase C1-like family
PNICKBOB_00579 0.0 L Transposase
PNICKBOB_00580 1.6e-219 L transposase, IS605 OrfB family
PNICKBOB_00581 4.5e-54
PNICKBOB_00582 4.4e-163 L An automated process has identified a potential problem with this gene model
PNICKBOB_00583 5.6e-103 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
PNICKBOB_00584 4.1e-256 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PNICKBOB_00585 1.1e-291 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PNICKBOB_00586 7.5e-277 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PNICKBOB_00587 7.9e-76 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PNICKBOB_00588 4.5e-140 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PNICKBOB_00589 1.6e-94 sigH K Belongs to the sigma-70 factor family
PNICKBOB_00590 2.2e-34
PNICKBOB_00591 1.1e-283 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
PNICKBOB_00592 5.4e-87 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PNICKBOB_00593 3.8e-79 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PNICKBOB_00594 2.4e-98 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PNICKBOB_00595 5.9e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PNICKBOB_00596 1.4e-101 nusG K Participates in transcription elongation, termination and antitermination
PNICKBOB_00597 2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PNICKBOB_00598 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PNICKBOB_00599 3.4e-222 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_00600 1.5e-64 L IS1381, transposase OrfA
PNICKBOB_00601 4.3e-158 pstS P Phosphate
PNICKBOB_00602 1.1e-173 pstC P probably responsible for the translocation of the substrate across the membrane
PNICKBOB_00603 7e-156 pstA P Phosphate transport system permease protein PstA
PNICKBOB_00604 1.1e-144 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PNICKBOB_00605 7.8e-140 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PNICKBOB_00606 3.2e-116 phoU P Plays a role in the regulation of phosphate uptake
PNICKBOB_00607 0.0 L Transposase
PNICKBOB_00608 3.6e-26 yfdV S Membrane transport protein
PNICKBOB_00609 1e-157 yfdV S Membrane transport protein
PNICKBOB_00610 5.4e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PNICKBOB_00611 4.1e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PNICKBOB_00612 4.9e-36 rsmC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
PNICKBOB_00613 2.8e-27 rsmC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
PNICKBOB_00614 1.2e-42 rsmC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
PNICKBOB_00615 2.7e-117 rsmC 2.1.1.172 J Methyltransferase
PNICKBOB_00616 6.9e-92 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PNICKBOB_00617 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PNICKBOB_00618 5e-38 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PNICKBOB_00619 2.1e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PNICKBOB_00620 2.9e-35 S Protein of unknown function (DUF2508)
PNICKBOB_00621 8.7e-116 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PNICKBOB_00622 2.2e-51 yaaQ S Cyclic-di-AMP receptor
PNICKBOB_00623 1.5e-155 holB 2.7.7.7 L DNA polymerase III
PNICKBOB_00624 2.4e-59 yabA L Involved in initiation control of chromosome replication
PNICKBOB_00625 2.3e-156 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PNICKBOB_00626 9.6e-143 fat 3.1.2.21 I Acyl-ACP thioesterase
PNICKBOB_00627 7.6e-86 S ECF transporter, substrate-specific component
PNICKBOB_00628 6.2e-134 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PNICKBOB_00629 1.6e-105 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PNICKBOB_00630 1.4e-198 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PNICKBOB_00632 1.5e-17 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PNICKBOB_00633 1.4e-58 L Transposase
PNICKBOB_00634 1.7e-19 S Toxin ToxN, type III toxin-antitoxin system
PNICKBOB_00635 2.9e-234 yfdE 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PNICKBOB_00636 1.4e-104 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PNICKBOB_00637 1.1e-26 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PNICKBOB_00638 1.7e-38 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
PNICKBOB_00639 8.3e-214 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
PNICKBOB_00640 1.4e-12 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
PNICKBOB_00641 0.0 uup S ABC transporter, ATP-binding protein
PNICKBOB_00642 2.6e-116 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PNICKBOB_00643 7.9e-79 XK27_02470 K LytTr DNA-binding domain
PNICKBOB_00644 7.2e-122 liaI S membrane
PNICKBOB_00645 1.1e-93 scrR K Transcriptional regulator, LacI family
PNICKBOB_00646 1.4e-15 scrR K Transcriptional regulator, LacI family
PNICKBOB_00647 5.4e-31 scrR K Transcriptional regulator, LacI family
PNICKBOB_00648 1e-102 2.7.1.199, 2.7.1.211 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PNICKBOB_00649 4.2e-49
PNICKBOB_00650 2.4e-25
PNICKBOB_00651 2.3e-90
PNICKBOB_00652 1.4e-192 L COG2826 Transposase and inactivated derivatives, IS30 family
PNICKBOB_00653 1.7e-309 nagZ 3.2.1.52 G Glycosyl hydrolase family 3 N terminal domain
PNICKBOB_00654 0.0 O Belongs to the peptidase S8 family
PNICKBOB_00655 5.5e-69 K DNA-binding transcription factor activity
PNICKBOB_00656 1.9e-197 L COG2826 Transposase and inactivated derivatives, IS30 family
PNICKBOB_00657 5.1e-111 sip L Belongs to the 'phage' integrase family
PNICKBOB_00658 3.9e-44 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PNICKBOB_00659 5e-293 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PNICKBOB_00660 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PNICKBOB_00661 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PNICKBOB_00662 1.6e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PNICKBOB_00663 6.1e-188 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PNICKBOB_00664 8.2e-38 yajC U Preprotein translocase
PNICKBOB_00665 4.9e-284 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PNICKBOB_00666 2.1e-213 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PNICKBOB_00667 2e-180 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PNICKBOB_00668 4.3e-229 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PNICKBOB_00669 8.1e-44
PNICKBOB_00670 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PNICKBOB_00671 2e-42 yrzL S Belongs to the UPF0297 family
PNICKBOB_00672 3.6e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PNICKBOB_00673 6.2e-51 yrzB S Belongs to the UPF0473 family
PNICKBOB_00674 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PNICKBOB_00675 4.6e-54 trxA O Belongs to the thioredoxin family
PNICKBOB_00676 1.2e-40 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PNICKBOB_00677 2.2e-205 L transposase, IS605 OrfB family
PNICKBOB_00678 2.1e-67 yslB S Protein of unknown function (DUF2507)
PNICKBOB_00679 1.8e-147 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PNICKBOB_00680 1.9e-115 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PNICKBOB_00681 8.8e-216 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_00682 1e-159 L An automated process has identified a potential problem with this gene model
PNICKBOB_00683 4.1e-153 ykuT M mechanosensitive ion channel
PNICKBOB_00684 3.3e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PNICKBOB_00685 5.1e-44
PNICKBOB_00686 0.0 L Transposase
PNICKBOB_00687 1.1e-204 L COG3547 Transposase and inactivated derivatives
PNICKBOB_00688 1.2e-216 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PNICKBOB_00689 1.9e-181 ccpA K catabolite control protein A
PNICKBOB_00690 1.1e-261 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PNICKBOB_00691 1.1e-55
PNICKBOB_00692 1.5e-277 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PNICKBOB_00693 1.8e-89 yutD S Protein of unknown function (DUF1027)
PNICKBOB_00694 1.2e-146 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PNICKBOB_00695 2.2e-84 S Protein of unknown function (DUF1461)
PNICKBOB_00696 1.8e-116 dedA S SNARE-like domain protein
PNICKBOB_00697 1.9e-152 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
PNICKBOB_00698 5.3e-79
PNICKBOB_00699 2.4e-83 S COG NOG38524 non supervised orthologous group
PNICKBOB_00716 1.4e-09 L COG2826 Transposase and inactivated derivatives, IS30 family
PNICKBOB_00717 5e-62 L COG2826 Transposase and inactivated derivatives, IS30 family
PNICKBOB_00729 4.8e-221 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
PNICKBOB_00730 4e-203 cpoA GT4 M Glycosyltransferase, group 1 family protein
PNICKBOB_00731 3.3e-173 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PNICKBOB_00732 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PNICKBOB_00733 2.3e-29 secG U Preprotein translocase
PNICKBOB_00734 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PNICKBOB_00735 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PNICKBOB_00736 5.3e-79
PNICKBOB_00739 2.4e-83 S COG NOG38524 non supervised orthologous group
PNICKBOB_00742 6.7e-178 psaA P Belongs to the bacterial solute-binding protein 9 family
PNICKBOB_00745 1.1e-217 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PNICKBOB_00746 5.7e-264 qacA EGP Major facilitator Superfamily
PNICKBOB_00747 4e-69 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PNICKBOB_00748 3.2e-239 L Probable transposase
PNICKBOB_00749 1.6e-43 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PNICKBOB_00750 3.5e-120 3.6.1.27 I Acid phosphatase homologues
PNICKBOB_00751 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PNICKBOB_00752 2e-297 ytgP S Polysaccharide biosynthesis protein
PNICKBOB_00753 1.5e-20 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PNICKBOB_00754 5.4e-87 O Belongs to the peptidase S8 family
PNICKBOB_00755 4.8e-68 O Belongs to the peptidase S8 family
PNICKBOB_00756 2.5e-35 infB UW LPXTG-motif cell wall anchor domain protein
PNICKBOB_00757 6.8e-18 infB UW LPXTG-motif cell wall anchor domain protein
PNICKBOB_00758 9.6e-35 infB UW LPXTG-motif cell wall anchor domain protein
PNICKBOB_00759 2.7e-19 atl 3.2.1.96, 3.5.1.28 GH73 UW LPXTG-motif cell wall anchor domain protein
PNICKBOB_00760 5.6e-21
PNICKBOB_00761 7.5e-59 CO Thioredoxin
PNICKBOB_00762 9.4e-118 M1-798 K Rhodanese Homology Domain
PNICKBOB_00763 4.1e-175 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PNICKBOB_00764 1.7e-10 frnE Q DSBA-like thioredoxin domain
PNICKBOB_00765 1.2e-18 frnE Q DSBA-like thioredoxin domain
PNICKBOB_00766 2.8e-39 frnE Q DSBA-like thioredoxin domain
PNICKBOB_00767 5.4e-28 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PNICKBOB_00768 1e-31 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
PNICKBOB_00769 3.4e-49 pspC KT PspC domain
PNICKBOB_00771 6.4e-243 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PNICKBOB_00772 8.1e-154 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PNICKBOB_00773 1.5e-110 M ErfK YbiS YcfS YnhG
PNICKBOB_00774 1e-72 padR K Virulence activator alpha C-term
PNICKBOB_00775 6.9e-103 padC Q Phenolic acid decarboxylase
PNICKBOB_00776 1.3e-113 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PNICKBOB_00778 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PNICKBOB_00779 3.5e-171 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PNICKBOB_00780 3e-90 3.6.1.55 L NUDIX domain
PNICKBOB_00781 2.1e-39
PNICKBOB_00782 3.9e-33
PNICKBOB_00783 6.6e-290 V ABC-type multidrug transport system, ATPase and permease components
PNICKBOB_00784 9.8e-286 V ABC-type multidrug transport system, ATPase and permease components
PNICKBOB_00785 4.4e-16 L PFAM IS66 Orf2 family protein
PNICKBOB_00786 1.2e-08
PNICKBOB_00788 2.6e-46 K Helix-turn-helix XRE-family like proteins
PNICKBOB_00789 5.3e-43
PNICKBOB_00790 1.6e-54 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PNICKBOB_00791 2.6e-44 L Probable transposase
PNICKBOB_00792 7.5e-56 L Probable transposase
PNICKBOB_00793 1.1e-71 L IS1381, transposase OrfA
PNICKBOB_00794 3.3e-83 racA K Domain of unknown function (DUF1836)
PNICKBOB_00795 1.2e-154 yitS S EDD domain protein, DegV family
PNICKBOB_00799 3.1e-150 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PNICKBOB_00800 9.8e-55
PNICKBOB_00801 2.1e-268 L COG2963 Transposase and inactivated derivatives
PNICKBOB_00802 2.3e-139 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PNICKBOB_00803 8.3e-31 mgtC S MgtC family
PNICKBOB_00804 4.5e-77 mgtC S MgtC family
PNICKBOB_00805 1.4e-21 bglH 3.2.1.86 GT1 G beta-glucosidase activity
PNICKBOB_00806 4.4e-163 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PNICKBOB_00807 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PNICKBOB_00808 8e-55 yheA S Belongs to the UPF0342 family
PNICKBOB_00809 1.8e-231 yhaO L Ser Thr phosphatase family protein
PNICKBOB_00810 0.0 L AAA domain
PNICKBOB_00811 3.4e-188 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
PNICKBOB_00812 1.1e-195 L COG2826 Transposase and inactivated derivatives, IS30 family
PNICKBOB_00813 1.7e-51 S PAS domain
PNICKBOB_00814 8.7e-154 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PNICKBOB_00815 8e-28
PNICKBOB_00816 3.1e-80 hit FG Scavenger mRNA decapping enzyme C-term binding
PNICKBOB_00817 3.3e-34 S Plasmid maintenance system killer
PNICKBOB_00818 3.8e-54 higA K Helix-turn-helix XRE-family like proteins
PNICKBOB_00819 2.2e-134 ecsA V ABC transporter, ATP-binding protein
PNICKBOB_00820 7.5e-214 ecsB U ABC transporter
PNICKBOB_00821 1e-124 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PNICKBOB_00822 4.7e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PNICKBOB_00823 3.3e-123 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PNICKBOB_00824 4.9e-259
PNICKBOB_00826 3.3e-71 L IS1381, transposase OrfA
PNICKBOB_00827 5e-218 L transposase, IS605 OrfB family
PNICKBOB_00829 1.8e-60 S Psort location Cytoplasmic, score
PNICKBOB_00830 2.8e-254 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PNICKBOB_00831 2.3e-176 S SLAP domain
PNICKBOB_00832 6.3e-290 M Peptidase family M1 domain
PNICKBOB_00833 2.9e-195 S Bacteriocin helveticin-J
PNICKBOB_00834 3.1e-14
PNICKBOB_00835 1.3e-162 L An automated process has identified a potential problem with this gene model
PNICKBOB_00836 4.3e-52 L RelB antitoxin
PNICKBOB_00837 4.8e-141 qmcA O prohibitin homologues
PNICKBOB_00838 2e-67 darA C Flavodoxin
PNICKBOB_00839 7.1e-16 darA C Flavodoxin
PNICKBOB_00840 3.9e-181 L Transposase
PNICKBOB_00841 1.2e-13 L Transposase
PNICKBOB_00842 2.9e-27 purD 6.3.4.13 F Belongs to the GARS family
PNICKBOB_00843 5.2e-92 purD 6.3.4.13 F Belongs to the GARS family
PNICKBOB_00844 2.6e-266 S Uncharacterised protein family (UPF0236)
PNICKBOB_00845 1.1e-149 hsdS2 2.1.1.72 L N-6 DNA Methylase
PNICKBOB_00846 0.0 hsdR 3.1.21.3 L Type I restriction enzyme R protein N terminus (HSDR_N)
PNICKBOB_00847 5.4e-286 hsdM 2.1.1.72 V type I restriction-modification system
PNICKBOB_00848 2.2e-89 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
PNICKBOB_00849 1.6e-64 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
PNICKBOB_00851 2.2e-15
PNICKBOB_00852 1.1e-91 V Type II restriction enzyme, methylase subunits
PNICKBOB_00853 1.9e-102 V Type II restriction enzyme, methylase subunits
PNICKBOB_00854 1.5e-54 V Type II restriction enzyme, methylase subunits
PNICKBOB_00855 1.1e-23 V Type II restriction enzyme, methylase subunits
PNICKBOB_00856 3e-30 V Type II restriction enzyme, methylase subunits
PNICKBOB_00857 9.2e-09 S Hypothetical protein (DUF2513)
PNICKBOB_00858 2.1e-35
PNICKBOB_00861 2.4e-11 K Transcriptional regulator, TetR family
PNICKBOB_00862 4e-170 L DDE superfamily endonuclease
PNICKBOB_00863 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PNICKBOB_00864 5.3e-158 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PNICKBOB_00865 4.5e-106 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PNICKBOB_00866 4.1e-83 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PNICKBOB_00867 6.2e-249 dnaB L Replication initiation and membrane attachment
PNICKBOB_00868 4e-167 dnaI L Primosomal protein DnaI
PNICKBOB_00869 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PNICKBOB_00870 1.6e-91
PNICKBOB_00871 5.4e-95
PNICKBOB_00873 9.9e-202 L COG2826 Transposase and inactivated derivatives, IS30 family
PNICKBOB_00874 8.6e-149 S Domain of unknown function (DUF389)
PNICKBOB_00875 6.4e-27 S Domain of unknown function (DUF389)
PNICKBOB_00876 2.7e-29 astA 2.8.2.22 M Arylsulfotransferase Ig-like domain
PNICKBOB_00877 6.1e-238 astA 2.8.2.22 M Arylsulfotransferase Ig-like domain
PNICKBOB_00878 1.5e-56 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PNICKBOB_00879 6.2e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PNICKBOB_00880 5.1e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PNICKBOB_00881 1.3e-93 yqeG S HAD phosphatase, family IIIA
PNICKBOB_00882 1.3e-212 yqeH S Ribosome biogenesis GTPase YqeH
PNICKBOB_00883 1.2e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PNICKBOB_00884 2.3e-110 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PNICKBOB_00885 3.4e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PNICKBOB_00886 1.7e-215 ylbM S Belongs to the UPF0348 family
PNICKBOB_00887 4.1e-98 yceD S Uncharacterized ACR, COG1399
PNICKBOB_00888 3.2e-127 K response regulator
PNICKBOB_00889 3.6e-280 arlS 2.7.13.3 T Histidine kinase
PNICKBOB_00890 1e-84 S Aminoacyl-tRNA editing domain
PNICKBOB_00891 6.8e-157 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PNICKBOB_00892 1.9e-43 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PNICKBOB_00893 3e-139 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PNICKBOB_00894 4.7e-63 yodB K Transcriptional regulator, HxlR family
PNICKBOB_00895 1.4e-203 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PNICKBOB_00896 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PNICKBOB_00897 1.4e-62 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PNICKBOB_00898 8.7e-170 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
PNICKBOB_00899 2.9e-57 S Phage derived protein Gp49-like (DUF891)
PNICKBOB_00900 5.3e-38 K Helix-turn-helix domain
PNICKBOB_00901 1.3e-246 L COG2963 Transposase and inactivated derivatives
PNICKBOB_00902 3.9e-72 L IS1381, transposase OrfA
PNICKBOB_00903 8.8e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
PNICKBOB_00904 0.0 S membrane
PNICKBOB_00905 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
PNICKBOB_00906 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PNICKBOB_00907 1.7e-99 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PNICKBOB_00908 6.8e-119 gluP 3.4.21.105 S Rhomboid family
PNICKBOB_00909 5.6e-33 yqgQ S Bacterial protein of unknown function (DUF910)
PNICKBOB_00910 8.5e-69 yqhL P Rhodanese-like protein
PNICKBOB_00911 9.4e-172 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PNICKBOB_00912 3.6e-70 L IS1381, transposase OrfA
PNICKBOB_00913 5.5e-21 ynbB 4.4.1.1 P aluminum resistance
PNICKBOB_00914 7e-64 ynbB 4.4.1.1 P aluminum resistance
PNICKBOB_00915 6.8e-264 glnA 6.3.1.2 E glutamine synthetase
PNICKBOB_00916 2.9e-136
PNICKBOB_00917 2.4e-164
PNICKBOB_00918 3.8e-150
PNICKBOB_00919 3.9e-81 L COG2963 Transposase and inactivated derivatives
PNICKBOB_00920 4.3e-45 L COG2963 Transposase and inactivated derivatives
PNICKBOB_00921 1.2e-191 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PNICKBOB_00922 3.3e-188 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
PNICKBOB_00923 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PNICKBOB_00924 4.9e-190 lacR K Transcriptional regulator
PNICKBOB_00925 6e-24 lacS G Transporter
PNICKBOB_00926 6.8e-48 lacS G Transporter
PNICKBOB_00927 5.9e-70 lacS G Transporter
PNICKBOB_00928 4e-57 lacS G Transporter
PNICKBOB_00929 0.0 lacS G Transporter
PNICKBOB_00930 1.7e-198 lacZ 3.2.1.23 G -beta-galactosidase
PNICKBOB_00931 8e-235 L COG2963 Transposase and inactivated derivatives
PNICKBOB_00932 1.3e-114 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PNICKBOB_00933 1.7e-31 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PNICKBOB_00934 3.4e-203 ydiM G Major Facilitator Superfamily
PNICKBOB_00935 3.6e-137 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PNICKBOB_00936 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PNICKBOB_00937 1.3e-84 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PNICKBOB_00938 4.3e-219 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PNICKBOB_00939 1.1e-132 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PNICKBOB_00940 1.3e-38 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PNICKBOB_00941 8.8e-127 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PNICKBOB_00942 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PNICKBOB_00943 2.4e-275 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PNICKBOB_00944 4.9e-201 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PNICKBOB_00945 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PNICKBOB_00946 4.3e-244 purD 6.3.4.13 F Belongs to the GARS family
PNICKBOB_00947 1.1e-204 L COG3547 Transposase and inactivated derivatives
PNICKBOB_00948 1.5e-233 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_00949 3.8e-143 K SIS domain
PNICKBOB_00950 6.3e-162 L An automated process has identified a potential problem with this gene model
PNICKBOB_00951 1.4e-165 yufQ S Belongs to the binding-protein-dependent transport system permease family
PNICKBOB_00952 1e-199 yufP S Belongs to the binding-protein-dependent transport system permease family
PNICKBOB_00953 3.6e-285 xylG 3.6.3.17 S ABC transporter
PNICKBOB_00954 1.4e-190 tcsA S ABC transporter substrate-binding protein PnrA-like
PNICKBOB_00955 1.1e-71 L IS1381, transposase OrfA
PNICKBOB_00957 2.2e-94 V ABC transporter transmembrane region
PNICKBOB_00958 6.1e-40 V ABC transporter transmembrane region
PNICKBOB_00959 1.2e-18
PNICKBOB_00960 1.3e-257 S Uncharacterised protein family (UPF0236)
PNICKBOB_00961 6.1e-219 naiP EGP Major facilitator Superfamily
PNICKBOB_00962 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
PNICKBOB_00963 3.6e-135 oppA E ABC transporter
PNICKBOB_00964 6.9e-21 oppA E ABC transporter
PNICKBOB_00965 2.2e-62 oppA E ABC transporter
PNICKBOB_00966 3.5e-36 Q Imidazolonepropionase and related amidohydrolases
PNICKBOB_00967 6e-49 Q Imidazolonepropionase and related amidohydrolases
PNICKBOB_00968 8.3e-73 Q Imidazolonepropionase and related amidohydrolases
PNICKBOB_00969 1.2e-22 Q Imidazolonepropionase and related amidohydrolases
PNICKBOB_00970 1.1e-17 psiE S Phosphate-starvation-inducible E
PNICKBOB_00972 9.6e-222 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PNICKBOB_00973 1.8e-289 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PNICKBOB_00974 3.5e-196 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PNICKBOB_00975 9.2e-78 S SLAP domain
PNICKBOB_00976 4.5e-114 S SLAP domain
PNICKBOB_00977 4.2e-98 L An automated process has identified a potential problem with this gene model
PNICKBOB_00978 1.8e-35 K response regulator
PNICKBOB_00979 3.1e-30 sptS 2.7.13.3 T Histidine kinase
PNICKBOB_00980 1.1e-114 sptS 2.7.13.3 T Histidine kinase
PNICKBOB_00981 1.6e-208 EGP Major facilitator Superfamily
PNICKBOB_00982 3.7e-72 O OsmC-like protein
PNICKBOB_00983 4.9e-128 dkgA 1.1.1.346 S L-ascorbic acid biosynthetic process
PNICKBOB_00984 1e-194 S Uncharacterised protein family (UPF0236)
PNICKBOB_00985 2.3e-34 S Uncharacterised protein family (UPF0236)
PNICKBOB_00986 1.6e-79
PNICKBOB_00987 8.8e-21
PNICKBOB_00988 4.5e-62
PNICKBOB_00989 1.7e-233 L COG2963 Transposase and inactivated derivatives
PNICKBOB_00990 1.4e-92
PNICKBOB_00991 3.8e-226 L Transposase
PNICKBOB_00992 0.0 hsdR 3.1.21.3 L DEAD/DEAH box helicase
PNICKBOB_00993 1.5e-277 hsdM 2.1.1.72 V type I restriction-modification system
PNICKBOB_00994 2.8e-109 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
PNICKBOB_00995 8.7e-139 K SIR2-like domain
PNICKBOB_00996 3.9e-72 L IS1381, transposase OrfA
PNICKBOB_00997 3.9e-32
PNICKBOB_00998 4e-22
PNICKBOB_01000 2e-127 G Peptidase_C39 like family
PNICKBOB_01001 1.7e-72 M NlpC/P60 family
PNICKBOB_01002 2.1e-29 M NlpC/P60 family
PNICKBOB_01003 1.1e-22 M NlpC/P60 family
PNICKBOB_01004 4.3e-12 M NlpC/P60 family
PNICKBOB_01005 3.9e-72 L IS1381, transposase OrfA
PNICKBOB_01006 0.0 cas3 L CRISPR-associated helicase cas3
PNICKBOB_01007 7.3e-95 casA L the current gene model (or a revised gene model) may contain a frame shift
PNICKBOB_01008 3.9e-72 L IS1381, transposase OrfA
PNICKBOB_01009 2.4e-114 casA L the current gene model (or a revised gene model) may contain a frame shift
PNICKBOB_01010 4.8e-66 casB S CRISPR-associated protein Cse2 (CRISPR_cse2)
PNICKBOB_01011 6.5e-159 casC L CT1975-like protein
PNICKBOB_01012 1.3e-91 casD S CRISPR-associated protein (Cas_Cas5)
PNICKBOB_01013 3.5e-88 casE S CRISPR_assoc
PNICKBOB_01014 1.5e-143 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PNICKBOB_01015 8.9e-103 cas2 2.7.7.7 L CRISPR-associated protein (Cas_Cas2CT1978)
PNICKBOB_01016 1e-43 L An automated process has identified a potential problem with this gene model
PNICKBOB_01017 2.8e-102 L An automated process has identified a potential problem with this gene model
PNICKBOB_01018 1.2e-20
PNICKBOB_01019 0.0 M domain protein
PNICKBOB_01020 2e-17
PNICKBOB_01021 2.5e-64 XK27_01125 L IS66 Orf2 like protein
PNICKBOB_01022 1.9e-30 S Transposase C of IS166 homeodomain
PNICKBOB_01023 1.4e-261 L Transposase IS66 family
PNICKBOB_01024 5.1e-54 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_01025 2.6e-50 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_01026 6e-86 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_01027 4.2e-15 L Resolvase, N terminal domain
PNICKBOB_01028 6.5e-44 L Resolvase, N terminal domain
PNICKBOB_01029 1.5e-124 L TIGRFAM transposase, IS605 OrfB family
PNICKBOB_01030 7.4e-55 L Probable transposase
PNICKBOB_01031 7.1e-207 G Major Facilitator Superfamily
PNICKBOB_01032 1.1e-204 L COG3547 Transposase and inactivated derivatives
PNICKBOB_01033 1.9e-236 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_01034 1.6e-227 L Transposase
PNICKBOB_01035 0.0 3.6.3.8 P P-type ATPase
PNICKBOB_01036 5.9e-112 yufQ S Belongs to the binding-protein-dependent transport system permease family
PNICKBOB_01037 2.8e-27 yufQ S Belongs to the binding-protein-dependent transport system permease family
PNICKBOB_01038 4.8e-57 yufP S Belongs to the binding-protein-dependent transport system permease family
PNICKBOB_01039 2.3e-33 S RelB antitoxin
PNICKBOB_01040 1e-113 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PNICKBOB_01041 5.4e-127 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PNICKBOB_01042 2.2e-168 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PNICKBOB_01043 4.2e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PNICKBOB_01044 7.2e-183 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PNICKBOB_01045 3.2e-247 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PNICKBOB_01046 7.1e-211 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PNICKBOB_01047 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PNICKBOB_01048 1.1e-47 L An automated process has identified a potential problem with this gene model
PNICKBOB_01049 1.7e-43
PNICKBOB_01051 5.8e-151 glcU U sugar transport
PNICKBOB_01052 2e-48
PNICKBOB_01053 2.5e-79 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PNICKBOB_01054 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PNICKBOB_01055 1.7e-21
PNICKBOB_01056 6.6e-65 arsC 1.20.4.1 P Belongs to the ArsC family
PNICKBOB_01057 1.9e-177 I Carboxylesterase family
PNICKBOB_01059 3.3e-209 M Glycosyl hydrolases family 25
PNICKBOB_01060 1.6e-68 S Predicted membrane protein (DUF2207)
PNICKBOB_01061 6.3e-162 L An automated process has identified a potential problem with this gene model
PNICKBOB_01062 9.8e-234 S Predicted membrane protein (DUF2207)
PNICKBOB_01063 2.1e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PNICKBOB_01064 2.5e-129 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
PNICKBOB_01065 1e-47 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PNICKBOB_01066 3.9e-72 L IS1381, transposase OrfA
PNICKBOB_01067 5.3e-127 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PNICKBOB_01068 1.1e-256 S Uncharacterized protein conserved in bacteria (DUF2325)
PNICKBOB_01069 4.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
PNICKBOB_01070 2.3e-47 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PNICKBOB_01071 4.4e-200 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PNICKBOB_01072 2.2e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PNICKBOB_01073 1.8e-69 yqhY S Asp23 family, cell envelope-related function
PNICKBOB_01074 8.1e-64 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PNICKBOB_01075 3.9e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PNICKBOB_01076 5.5e-200 L COG2826 Transposase and inactivated derivatives, IS30 family
PNICKBOB_01077 3.9e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PNICKBOB_01078 1.2e-194 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PNICKBOB_01079 7.5e-36 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PNICKBOB_01080 2.4e-161 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PNICKBOB_01081 6e-154 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PNICKBOB_01082 1.3e-307 recN L May be involved in recombinational repair of damaged DNA
PNICKBOB_01083 3.5e-21 6.3.3.2 S ASCH
PNICKBOB_01084 8.1e-44 6.3.3.2 S ASCH
PNICKBOB_01085 1.9e-112 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PNICKBOB_01086 3.2e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PNICKBOB_01087 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PNICKBOB_01088 6e-174 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PNICKBOB_01089 2e-247 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PNICKBOB_01090 9.2e-147 stp 3.1.3.16 T phosphatase
PNICKBOB_01091 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
PNICKBOB_01092 1.3e-165 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PNICKBOB_01093 2.9e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PNICKBOB_01094 1.4e-127 thiN 2.7.6.2 H thiamine pyrophosphokinase
PNICKBOB_01095 1.1e-204 L COG3547 Transposase and inactivated derivatives
PNICKBOB_01096 1.6e-51
PNICKBOB_01097 1.1e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PNICKBOB_01098 6.8e-57 asp S Asp23 family, cell envelope-related function
PNICKBOB_01099 1.1e-306 yloV S DAK2 domain fusion protein YloV
PNICKBOB_01100 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PNICKBOB_01101 9.9e-183 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PNICKBOB_01102 3.4e-36 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PNICKBOB_01103 1e-195 oppD P Belongs to the ABC transporter superfamily
PNICKBOB_01104 2.8e-182 oppF P Belongs to the ABC transporter superfamily
PNICKBOB_01105 2.3e-176 oppB P ABC transporter permease
PNICKBOB_01106 6.6e-149 oppC P Binding-protein-dependent transport system inner membrane component
PNICKBOB_01107 0.0 oppA E ABC transporter substrate-binding protein
PNICKBOB_01108 2.7e-301 oppA E ABC transporter substrate-binding protein
PNICKBOB_01109 1.3e-125 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PNICKBOB_01110 0.0 smc D Required for chromosome condensation and partitioning
PNICKBOB_01111 1.3e-166 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PNICKBOB_01112 1.5e-288 pipD E Dipeptidase
PNICKBOB_01113 2e-17
PNICKBOB_01114 2.5e-64 XK27_01125 L IS66 Orf2 like protein
PNICKBOB_01115 1.9e-30 S Transposase C of IS166 homeodomain
PNICKBOB_01116 1.4e-261 L Transposase IS66 family
PNICKBOB_01117 5.2e-108 L Transposase
PNICKBOB_01118 1.9e-183 L Transposase
PNICKBOB_01119 5.2e-44
PNICKBOB_01120 1.1e-259 yfnA E amino acid
PNICKBOB_01121 1.1e-135 L Transposase and inactivated derivatives, IS30 family
PNICKBOB_01122 3.2e-56 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PNICKBOB_01123 6.4e-228 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PNICKBOB_01124 4.5e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PNICKBOB_01125 1.5e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PNICKBOB_01126 2.2e-136 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PNICKBOB_01127 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PNICKBOB_01128 7.1e-121 ung2 3.2.2.27 L Uracil-DNA glycosylase
PNICKBOB_01129 3.6e-148 E GDSL-like Lipase/Acylhydrolase family
PNICKBOB_01130 3.6e-114 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PNICKBOB_01131 5.1e-38 ynzC S UPF0291 protein
PNICKBOB_01132 1.2e-129 L An automated process has identified a potential problem with this gene model
PNICKBOB_01133 4.2e-30 yneF S Uncharacterised protein family (UPF0154)
PNICKBOB_01134 1.5e-133 mdlA V ABC transporter
PNICKBOB_01135 3.5e-63 L transposase, IS605 OrfB family
PNICKBOB_01136 8.6e-59 L transposase, IS605 OrfB family
PNICKBOB_01137 3.7e-40 L transposase, IS605 OrfB family
PNICKBOB_01138 9.1e-152 mdlA V ABC transporter
PNICKBOB_01139 2.8e-273 mdlB V ABC transporter
PNICKBOB_01140 0.0 pepO 3.4.24.71 O Peptidase family M13
PNICKBOB_01141 1.4e-231 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PNICKBOB_01142 6.4e-116 plsC 2.3.1.51 I Acyltransferase
PNICKBOB_01143 2.4e-200 yabB 2.1.1.223 L Methyltransferase small domain
PNICKBOB_01144 2.1e-140 rpsB J Belongs to the universal ribosomal protein uS2 family
PNICKBOB_01145 2.2e-185 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PNICKBOB_01146 5.8e-234 L COG2963 Transposase and inactivated derivatives
PNICKBOB_01147 2.8e-131 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PNICKBOB_01148 4e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PNICKBOB_01149 1.4e-138 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PNICKBOB_01150 1.6e-146 cdsA 2.7.7.41 I Belongs to the CDS family
PNICKBOB_01151 2.3e-197 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PNICKBOB_01152 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PNICKBOB_01153 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PNICKBOB_01154 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
PNICKBOB_01155 4.2e-201 nusA K Participates in both transcription termination and antitermination
PNICKBOB_01156 8.8e-47 ylxR K Protein of unknown function (DUF448)
PNICKBOB_01157 1.2e-46 rplGA J ribosomal protein
PNICKBOB_01158 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PNICKBOB_01159 4.3e-59 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PNICKBOB_01160 7.5e-166 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PNICKBOB_01161 2.8e-182 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PNICKBOB_01162 2.5e-192 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PNICKBOB_01163 3.7e-79 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PNICKBOB_01164 0.0 dnaK O Heat shock 70 kDa protein
PNICKBOB_01165 2.6e-203 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PNICKBOB_01166 1.1e-95 L An automated process has identified a potential problem with this gene model
PNICKBOB_01167 3.8e-15
PNICKBOB_01168 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PNICKBOB_01169 2.1e-120 srtA 3.4.22.70 M sortase family
PNICKBOB_01170 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PNICKBOB_01171 3.7e-96 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PNICKBOB_01172 9.5e-172 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PNICKBOB_01173 4.2e-152 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PNICKBOB_01174 1.8e-87 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PNICKBOB_01175 1.6e-129 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PNICKBOB_01176 5.4e-34 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PNICKBOB_01177 1.6e-85 3.4.21.96 S SLAP domain
PNICKBOB_01178 0.0 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
PNICKBOB_01179 2.3e-156 lysR5 K LysR substrate binding domain
PNICKBOB_01180 3.2e-26 arcA 3.5.3.6 E Arginine
PNICKBOB_01181 1.3e-59 arcA 3.5.3.6 E Arginine
PNICKBOB_01182 4.9e-44 arcA 3.5.3.6 E Arginine
PNICKBOB_01183 3.9e-13 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PNICKBOB_01184 4.8e-140 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PNICKBOB_01185 5.8e-68 arcC 2.7.2.2 E Belongs to the carbamate kinase family
PNICKBOB_01186 3.4e-97 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PNICKBOB_01187 2.5e-214 S Sterol carrier protein domain
PNICKBOB_01188 1.1e-19
PNICKBOB_01189 5.9e-106 K LysR substrate binding domain
PNICKBOB_01190 2.4e-74
PNICKBOB_01191 0.0 L Transposase
PNICKBOB_01192 1.1e-204 L COG3547 Transposase and inactivated derivatives
PNICKBOB_01193 4.3e-236 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_01194 4.5e-59
PNICKBOB_01195 6.3e-19
PNICKBOB_01196 3.4e-163 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PNICKBOB_01197 1.5e-82 S Peptidase family M23
PNICKBOB_01198 8e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PNICKBOB_01199 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PNICKBOB_01200 1.1e-69 yqeY S YqeY-like protein
PNICKBOB_01201 3.3e-175 phoH T phosphate starvation-inducible protein PhoH
PNICKBOB_01202 2.5e-100 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PNICKBOB_01203 1.1e-169 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PNICKBOB_01204 3e-136 recO L Involved in DNA repair and RecF pathway recombination
PNICKBOB_01205 4.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PNICKBOB_01206 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PNICKBOB_01207 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PNICKBOB_01208 8.3e-199 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PNICKBOB_01209 1.2e-125 S Peptidase family M23
PNICKBOB_01210 5.1e-30 mutT 3.6.1.55 F NUDIX domain
PNICKBOB_01211 1.7e-125 trmK 2.1.1.217 S SAM-dependent methyltransferase
PNICKBOB_01212 2.6e-154 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PNICKBOB_01213 8e-243 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PNICKBOB_01214 3.9e-60 yvoA_1 K Transcriptional regulator, GntR family
PNICKBOB_01215 2.8e-123 skfE V ATPases associated with a variety of cellular activities
PNICKBOB_01216 6e-149
PNICKBOB_01217 5e-148
PNICKBOB_01218 1.2e-130
PNICKBOB_01219 3.9e-33 rarA L recombination factor protein RarA
PNICKBOB_01220 6.6e-60 rarA L recombination factor protein RarA
PNICKBOB_01221 7.8e-28
PNICKBOB_01222 2.8e-105 lepB 3.4.21.89 U Peptidase S24-like
PNICKBOB_01223 7.8e-140
PNICKBOB_01224 1.3e-179
PNICKBOB_01225 1.7e-262 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
PNICKBOB_01226 6.7e-187 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PNICKBOB_01227 4.2e-203 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PNICKBOB_01228 7.5e-180 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PNICKBOB_01229 9.6e-169 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
PNICKBOB_01230 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PNICKBOB_01231 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PNICKBOB_01232 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PNICKBOB_01233 2.9e-90 ypmB S Protein conserved in bacteria
PNICKBOB_01234 5.8e-260 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PNICKBOB_01235 7.4e-115 dnaD L DnaD domain protein
PNICKBOB_01236 3.9e-113 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PNICKBOB_01237 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PNICKBOB_01238 1.2e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PNICKBOB_01239 5e-107 ypsA S Belongs to the UPF0398 family
PNICKBOB_01240 8e-70 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PNICKBOB_01241 1e-220 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PNICKBOB_01242 1.9e-10 cpdA S Calcineurin-like phosphoesterase
PNICKBOB_01243 3.5e-87 cpdA S Calcineurin-like phosphoesterase
PNICKBOB_01244 3e-79 cpdA S Calcineurin-like phosphoesterase
PNICKBOB_01245 7e-33
PNICKBOB_01246 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PNICKBOB_01247 7.3e-80 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PNICKBOB_01248 1.6e-168 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PNICKBOB_01249 3e-198 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PNICKBOB_01250 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
PNICKBOB_01251 0.0 FbpA K Fibronectin-binding protein
PNICKBOB_01252 7.7e-65
PNICKBOB_01253 5e-24 degV S EDD domain protein, DegV family
PNICKBOB_01254 2e-17
PNICKBOB_01255 2.5e-64 XK27_01125 L IS66 Orf2 like protein
PNICKBOB_01256 1.9e-30 S Transposase C of IS166 homeodomain
PNICKBOB_01257 1.4e-261 L Transposase IS66 family
PNICKBOB_01258 7.1e-124 degV S EDD domain protein, DegV family
PNICKBOB_01259 2e-227 L Transposase
PNICKBOB_01260 7.6e-205 xerS L Belongs to the 'phage' integrase family
PNICKBOB_01261 1.8e-67
PNICKBOB_01262 1.3e-78 adk 2.7.4.3 F topology modulation protein
PNICKBOB_01263 1.2e-109 XK27_00160 S Domain of unknown function (DUF5052)
PNICKBOB_01264 1.4e-54
PNICKBOB_01265 1.8e-27 M Glycosyl hydrolases family 25
PNICKBOB_01266 2.5e-44 M Glycosyl hydrolases family 25
PNICKBOB_01267 1.1e-47 M Glycosyl hydrolases family 25
PNICKBOB_01268 2.3e-25 lysA2 M Glycosyl hydrolases family 25
PNICKBOB_01269 3.2e-34 S Transglycosylase associated protein
PNICKBOB_01270 2.4e-51 yoaK S Protein of unknown function (DUF1275)
PNICKBOB_01271 2.1e-55 K Helix-turn-helix domain
PNICKBOB_01272 3.7e-174 pepO 3.4.24.71 O Peptidase family M13
PNICKBOB_01273 1.3e-54 XK27_11280 S Psort location CytoplasmicMembrane, score
PNICKBOB_01274 1.1e-195 L COG2826 Transposase and inactivated derivatives, IS30 family
PNICKBOB_01275 4.4e-61 XK27_11280 S Psort location CytoplasmicMembrane, score
PNICKBOB_01276 6.8e-63 XK27_11280 S Psort location CytoplasmicMembrane, score
PNICKBOB_01277 0.0 prtS 3.4.21.110, 3.4.21.96 O Belongs to the peptidase S8 family
PNICKBOB_01278 9.9e-158 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PNICKBOB_01279 1.9e-62 yfjM S Protein of unknown function DUF262
PNICKBOB_01280 4.2e-220 L Transposase
PNICKBOB_01281 1.2e-106 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PNICKBOB_01282 1.3e-163 ppaC 3.6.1.1 C inorganic pyrophosphatase
PNICKBOB_01283 3.8e-171 K Transcriptional regulator
PNICKBOB_01284 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PNICKBOB_01285 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PNICKBOB_01286 6.5e-108 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PNICKBOB_01287 7.2e-210 snf 2.7.11.1 KL domain protein
PNICKBOB_01288 1.2e-85 dps P Belongs to the Dps family
PNICKBOB_01289 2e-94 K acetyltransferase
PNICKBOB_01290 5.4e-158 K COG COG0846 NAD-dependent protein deacetylases, SIR2 family
PNICKBOB_01291 1.8e-98 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PNICKBOB_01292 2.8e-108 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PNICKBOB_01293 6.6e-84 K Bacterial regulatory proteins, tetR family
PNICKBOB_01294 5.4e-47 1.1.1.3 T phosphoserine phosphatase activity
PNICKBOB_01295 9.9e-143 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PNICKBOB_01296 2.1e-39 S Hydrolases of the alpha beta superfamily
PNICKBOB_01297 8.9e-57 S Alpha beta hydrolase
PNICKBOB_01298 5e-66 K Acetyltransferase (GNAT) family
PNICKBOB_01299 5.8e-255 gor 1.8.1.7 C Glutathione reductase
PNICKBOB_01301 9.9e-117 L Integrase
PNICKBOB_01303 1.7e-90 dam 2.1.1.72 H Site-specific DNA-methyltransferase (adenine-specific)
PNICKBOB_01304 8.5e-204 L DDE superfamily endonuclease
PNICKBOB_01305 4.2e-197 L hmm pf00665
PNICKBOB_01306 1.7e-42 L Helix-turn-helix domain
PNICKBOB_01307 3.6e-73 L Helix-turn-helix domain
PNICKBOB_01308 9.1e-161 cjaA ET ABC transporter substrate-binding protein
PNICKBOB_01309 4.3e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PNICKBOB_01310 4e-79 P ABC transporter permease
PNICKBOB_01311 6e-112 papP P ABC transporter, permease protein
PNICKBOB_01312 3.4e-25 S Uncharacterized protein conserved in bacteria (DUF2255)
PNICKBOB_01313 3.1e-43 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PNICKBOB_01314 3.4e-15 tnp2PF3 L Transposase
PNICKBOB_01315 1.5e-48 hutG 3.5.3.8 E N-formylglutamate amidohydrolase
PNICKBOB_01316 3.1e-98 3.6.1.55, 3.6.1.67 F NUDIX domain
PNICKBOB_01317 3.9e-201 folP 2.5.1.15 H dihydropteroate synthase
PNICKBOB_01318 4.4e-247 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PNICKBOB_01319 4.6e-202 folE 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 F GTP cyclohydrolase 1
PNICKBOB_01320 3.2e-56 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PNICKBOB_01321 8e-125 magIII L Base excision DNA repair protein, HhH-GPD family
PNICKBOB_01322 7.3e-09
PNICKBOB_01323 2.7e-25
PNICKBOB_01324 1.6e-76 K LytTr DNA-binding domain
PNICKBOB_01325 3.3e-52 S Protein of unknown function (DUF3021)
PNICKBOB_01326 7e-89 XK27_09675 K Acetyltransferase (GNAT) domain
PNICKBOB_01327 5e-90
PNICKBOB_01328 3.3e-47
PNICKBOB_01329 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PNICKBOB_01330 2.2e-190 V Beta-lactamase
PNICKBOB_01331 7.6e-274 pepV 3.5.1.18 E dipeptidase PepV
PNICKBOB_01332 4.9e-233 L COG2963 Transposase and inactivated derivatives
PNICKBOB_01333 1.1e-245 brnQ U Component of the transport system for branched-chain amino acids
PNICKBOB_01334 4.2e-43
PNICKBOB_01335 4.1e-89 malY 4.4.1.8 E Aminotransferase, class I
PNICKBOB_01336 6e-56 malY 4.4.1.8 E Aminotransferase, class I
PNICKBOB_01337 3e-37
PNICKBOB_01338 2.1e-76 S LexA-binding, inner membrane-associated putative hydrolase
PNICKBOB_01339 3.4e-22
PNICKBOB_01340 1.1e-92 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PNICKBOB_01342 5e-182 L transposase, IS605 OrfB family
PNICKBOB_01343 3.3e-10 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
PNICKBOB_01344 1.6e-249 N Uncharacterized conserved protein (DUF2075)
PNICKBOB_01345 2.1e-34 mmuP E amino acid
PNICKBOB_01346 7.2e-130 mmuP E amino acid
PNICKBOB_01347 1.8e-30 mmuP E amino acid
PNICKBOB_01348 4.2e-36 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PNICKBOB_01349 1.6e-25 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PNICKBOB_01350 3.2e-41 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PNICKBOB_01351 1.2e-232 amd 3.5.1.47 E Peptidase family M20/M25/M40
PNICKBOB_01352 2.5e-234 steT E amino acid
PNICKBOB_01353 3e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
PNICKBOB_01354 0.0 pepO 3.4.24.71 O Peptidase family M13
PNICKBOB_01355 9.7e-183 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PNICKBOB_01356 1.7e-304 XK27_11280 S Psort location CytoplasmicMembrane, score
PNICKBOB_01357 5.9e-199 yfjM S Protein of unknown function DUF262
PNICKBOB_01358 3.9e-72 L IS1381, transposase OrfA
PNICKBOB_01359 3.2e-141 yfjM S Protein of unknown function DUF262
PNICKBOB_01360 5.3e-270 hsdR 2.1.1.72, 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
PNICKBOB_01361 2.1e-271 S Archaea bacterial proteins of unknown function
PNICKBOB_01362 4.4e-73
PNICKBOB_01363 1.8e-59 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PNICKBOB_01364 8.7e-34 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
PNICKBOB_01365 1.5e-57 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
PNICKBOB_01366 1e-88 dps P Belongs to the Dps family
PNICKBOB_01367 6e-35 copZ C Heavy-metal-associated domain
PNICKBOB_01368 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
PNICKBOB_01369 1.7e-49 mepA V MATE efflux family protein
PNICKBOB_01370 1.7e-20 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PNICKBOB_01371 1.3e-262 npr 1.11.1.1 C NADH oxidase
PNICKBOB_01372 5.3e-68 S pyridoxamine 5-phosphate
PNICKBOB_01373 1.4e-170 yobV1 K WYL domain
PNICKBOB_01374 3e-53 XK26_02160 S Pyridoxamine 5'-phosphate oxidase
PNICKBOB_01375 4.9e-33
PNICKBOB_01376 4.9e-55
PNICKBOB_01377 1.1e-54 4.4.1.5 E lactoylglutathione lyase activity
PNICKBOB_01378 5.2e-65 S ASCH domain
PNICKBOB_01379 5.4e-109 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PNICKBOB_01380 5.2e-80
PNICKBOB_01381 3.9e-72 L IS1381, transposase OrfA
PNICKBOB_01382 1.4e-286
PNICKBOB_01383 6.3e-107 V Transport permease protein
PNICKBOB_01384 1.3e-123 V Transport permease protein
PNICKBOB_01385 9.3e-50 CP ATPases associated with a variety of cellular activities
PNICKBOB_01386 2.9e-57 CP ATPases associated with a variety of cellular activities
PNICKBOB_01387 4e-43
PNICKBOB_01388 2.4e-37
PNICKBOB_01389 1.3e-51 V ABC transporter transmembrane region
PNICKBOB_01390 3.9e-72 L IS1381, transposase OrfA
PNICKBOB_01391 9.5e-212 V ABC transporter transmembrane region
PNICKBOB_01392 3.9e-72 L IS1381, transposase OrfA
PNICKBOB_01393 1.9e-286 lsa S ABC transporter
PNICKBOB_01394 1.9e-74 S Protein of unknown function (DUF3021)
PNICKBOB_01395 6.6e-75 K LytTr DNA-binding domain
PNICKBOB_01396 1.3e-103 rdgB 3.6.1.66, 5.1.1.3 F Ham1 family
PNICKBOB_01399 0.0 uvrA3 L excinuclease ABC, A subunit
PNICKBOB_01400 5.7e-94 yyaR K Acetyltransferase (GNAT) domain
PNICKBOB_01401 1.2e-88 mta K helix_turn_helix, mercury resistance
PNICKBOB_01402 5.3e-07 S ParE toxin of type II toxin-antitoxin system, parDE
PNICKBOB_01403 6e-234 L COG2963 Transposase and inactivated derivatives
PNICKBOB_01404 2e-17
PNICKBOB_01405 2.5e-64 XK27_01125 L IS66 Orf2 like protein
PNICKBOB_01406 1.9e-30 S Transposase C of IS166 homeodomain
PNICKBOB_01407 1.4e-261 L Transposase IS66 family
PNICKBOB_01408 1.3e-304 L Transposase
PNICKBOB_01409 1.1e-63 S Domain of unknown function (DUF5067)
PNICKBOB_01410 4.8e-63
PNICKBOB_01413 4.3e-120 XK27_07525 3.6.1.55 F NUDIX domain
PNICKBOB_01414 6.2e-145 2.4.2.3 F Phosphorylase superfamily
PNICKBOB_01415 6.4e-75 cdd 2.4.2.4, 3.5.4.5 F Cytidine and deoxycytidylate deaminase zinc-binding region
PNICKBOB_01417 3.6e-79 K Acetyltransferase (GNAT) domain
PNICKBOB_01418 4.2e-53
PNICKBOB_01419 1.3e-143 L Transposase
PNICKBOB_01420 8.6e-43 L Transposase
PNICKBOB_01421 5.4e-135
PNICKBOB_01422 6.1e-208 EGP Major facilitator Superfamily
PNICKBOB_01423 1.7e-102
PNICKBOB_01424 6e-108 S Fic/DOC family
PNICKBOB_01425 1.9e-56
PNICKBOB_01426 8.3e-91
PNICKBOB_01427 4.4e-40 ypaA S Protein of unknown function (DUF1304)
PNICKBOB_01428 9.2e-69 S Putative adhesin
PNICKBOB_01429 2.6e-294 V ABC-type multidrug transport system, ATPase and permease components
PNICKBOB_01430 2.9e-293 P ABC transporter
PNICKBOB_01431 9.7e-61
PNICKBOB_01432 6.5e-34
PNICKBOB_01433 1e-256 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PNICKBOB_01434 7.8e-236 mepA V MATE efflux family protein
PNICKBOB_01435 6.9e-231 S Putative peptidoglycan binding domain
PNICKBOB_01436 4e-93 S ECF-type riboflavin transporter, S component
PNICKBOB_01437 3.7e-151 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PNICKBOB_01438 5.7e-208 pbpX1 V Beta-lactamase
PNICKBOB_01439 2.7e-106 lacA 2.3.1.79 S Transferase hexapeptide repeat
PNICKBOB_01440 4.4e-112 3.6.1.27 I Acid phosphatase homologues
PNICKBOB_01441 1.3e-81 C Flavodoxin
PNICKBOB_01442 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PNICKBOB_01443 2e-77 ktrB P Potassium uptake protein
PNICKBOB_01444 9.3e-247 ynbB 4.4.1.1 P aluminum resistance
PNICKBOB_01445 1.7e-145 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PNICKBOB_01446 1.2e-255 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PNICKBOB_01447 1.4e-72 E Amino acid permease
PNICKBOB_01448 1.8e-104 E Amino acid permease
PNICKBOB_01449 6.9e-44 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
PNICKBOB_01450 5.5e-29 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
PNICKBOB_01451 2.9e-63 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PNICKBOB_01452 4.2e-65 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PNICKBOB_01453 1.8e-234 S Uncharacterised protein family (UPF0236)
PNICKBOB_01454 3.6e-151 xerD L Phage integrase, N-terminal SAM-like domain
PNICKBOB_01456 6.9e-81 L COG2826 Transposase and inactivated derivatives, IS30 family
PNICKBOB_01457 1.6e-176 lacX 5.1.3.3 G Aldose 1-epimerase
PNICKBOB_01458 7.7e-234 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PNICKBOB_01459 3e-90 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PNICKBOB_01460 3e-170 xerC D Phage integrase, N-terminal SAM-like domain
PNICKBOB_01461 1.9e-250 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PNICKBOB_01462 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PNICKBOB_01463 1.1e-155 dprA LU DNA protecting protein DprA
PNICKBOB_01464 2.9e-134 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PNICKBOB_01465 7.6e-160 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PNICKBOB_01466 1.2e-278 yjcE P Sodium proton antiporter
PNICKBOB_01467 9.3e-36 yozE S Belongs to the UPF0346 family
PNICKBOB_01468 7.7e-149 DegV S Uncharacterised protein, DegV family COG1307
PNICKBOB_01469 6.7e-114 hlyIII S protein, hemolysin III
PNICKBOB_01470 3e-226 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PNICKBOB_01471 3.2e-161 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PNICKBOB_01472 7.8e-230 S Tetratricopeptide repeat protein
PNICKBOB_01473 3e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PNICKBOB_01474 1.4e-245 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PNICKBOB_01475 3.3e-209 rpsA 1.17.7.4 J Ribosomal protein S1
PNICKBOB_01476 7.7e-115 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PNICKBOB_01477 2.4e-30 M Lysin motif
PNICKBOB_01478 5.5e-24 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PNICKBOB_01479 3.9e-72 L IS1381, transposase OrfA
PNICKBOB_01480 4e-88 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PNICKBOB_01481 1e-128 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PNICKBOB_01482 4.1e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PNICKBOB_01483 2.5e-130 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PNICKBOB_01484 4.9e-60 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PNICKBOB_01485 4e-167 xerD D recombinase XerD
PNICKBOB_01486 7.2e-169 cvfB S S1 domain
PNICKBOB_01487 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PNICKBOB_01488 6.6e-184 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PNICKBOB_01489 0.0 dnaE 2.7.7.7 L DNA polymerase
PNICKBOB_01490 2.5e-22 S Protein of unknown function (DUF2929)
PNICKBOB_01491 4.3e-311 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PNICKBOB_01492 7.6e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PNICKBOB_01493 6.2e-33 yrvD S Lipopolysaccharide assembly protein A domain
PNICKBOB_01494 1.2e-143 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PNICKBOB_01495 3.1e-178 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PNICKBOB_01496 0.0 oatA I Acyltransferase
PNICKBOB_01497 5.5e-242 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PNICKBOB_01498 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PNICKBOB_01499 3.5e-71 dedA 3.1.3.1 S SNARE associated Golgi protein
PNICKBOB_01500 2.6e-250 yfnA E Amino Acid
PNICKBOB_01501 3.3e-43 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PNICKBOB_01502 9.9e-78 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PNICKBOB_01503 7e-11 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PNICKBOB_01504 9.6e-46 yxeH S hydrolase
PNICKBOB_01505 1.9e-84 yxeH S hydrolase
PNICKBOB_01506 2.4e-158 S reductase
PNICKBOB_01507 1.7e-218 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PNICKBOB_01508 3.7e-210 S Uncharacterised protein family (UPF0236)
PNICKBOB_01509 2.1e-224 patA 2.6.1.1 E Aminotransferase
PNICKBOB_01510 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PNICKBOB_01511 1.1e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
PNICKBOB_01512 3.9e-75 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PNICKBOB_01513 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PNICKBOB_01514 1.3e-50
PNICKBOB_01515 6.1e-174 prmA J Ribosomal protein L11 methyltransferase
PNICKBOB_01516 3.3e-86 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PNICKBOB_01517 1.3e-170 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_01518 4.2e-56 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_01519 7.3e-92 L the current gene model (or a revised gene model) may contain a
PNICKBOB_01520 3.3e-204 L COG3547 Transposase and inactivated derivatives
PNICKBOB_01521 2e-228 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_01522 5.5e-97 yxkA S Phosphatidylethanolamine-binding protein
PNICKBOB_01523 4e-248 yjjP S Putative threonine/serine exporter
PNICKBOB_01524 1.8e-178 citR K Putative sugar-binding domain
PNICKBOB_01525 4.9e-54
PNICKBOB_01526 1.6e-16
PNICKBOB_01527 2.2e-66 S Domain of unknown function DUF1828
PNICKBOB_01528 5.6e-95 S UPF0397 protein
PNICKBOB_01529 0.0 ykoD P ABC transporter, ATP-binding protein
PNICKBOB_01530 4.3e-147 cbiQ P cobalt transport
PNICKBOB_01531 2.7e-10
PNICKBOB_01532 2.7e-71 yeaL S Protein of unknown function (DUF441)
PNICKBOB_01533 1.2e-219 L Transposase
PNICKBOB_01534 6.9e-150
PNICKBOB_01535 6.4e-290 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
PNICKBOB_01536 1.2e-166 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
PNICKBOB_01537 9.1e-44 citD C Covalent carrier of the coenzyme of citrate lyase
PNICKBOB_01538 6.3e-196 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PNICKBOB_01539 4e-155 ydjP I Alpha/beta hydrolase family
PNICKBOB_01540 9.4e-275 P Sodium:sulfate symporter transmembrane region
PNICKBOB_01541 1.6e-227 L Transposase
PNICKBOB_01542 9.4e-258 pepC 3.4.22.40 E Peptidase C1-like family
PNICKBOB_01543 2.4e-75
PNICKBOB_01544 1e-74 fhaB M Rib/alpha-like repeat
PNICKBOB_01545 1.3e-168 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PNICKBOB_01547 3.3e-38 UW LPXTG-motif cell wall anchor domain protein
PNICKBOB_01548 3.5e-09 UW LPXTG-motif cell wall anchor domain protein
PNICKBOB_01549 7.5e-128 S YSIRK type signal peptide
PNICKBOB_01550 6.2e-13 M domain protein
PNICKBOB_01552 3.4e-57 M domain protein
PNICKBOB_01553 3.2e-10 M domain protein
PNICKBOB_01554 7e-264 frdC 1.3.5.4 C FAD binding domain
PNICKBOB_01555 9e-267 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PNICKBOB_01556 6.2e-162 L An automated process has identified a potential problem with this gene model
PNICKBOB_01557 1.6e-85 repA S Replication initiator protein A
PNICKBOB_01558 9.4e-36 relB L Addiction module antitoxin, RelB DinJ family
PNICKBOB_01559 2.2e-85
PNICKBOB_01560 2.9e-122 S SLAP domain
PNICKBOB_01561 5.3e-172 S Bacteriocin helveticin-J
PNICKBOB_01562 6.2e-162 L An automated process has identified a potential problem with this gene model
PNICKBOB_01563 6.5e-30 S cog cog1373
PNICKBOB_01564 6.4e-88 metI P ABC transporter permease
PNICKBOB_01565 5.2e-190 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PNICKBOB_01566 2.8e-162 metQ1 P Belongs to the nlpA lipoprotein family
PNICKBOB_01567 0.0 aha1 P E1-E2 ATPase
PNICKBOB_01568 4.9e-151 L An automated process has identified a potential problem with this gene model
PNICKBOB_01569 7.2e-16 ps301 K sequence-specific DNA binding
PNICKBOB_01570 8.1e-96 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PNICKBOB_01571 1.7e-187 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PNICKBOB_01573 5.4e-91 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PNICKBOB_01574 2.3e-99 3.6.1.27 I Acid phosphatase homologues
PNICKBOB_01575 3.3e-90 yitS S Uncharacterised protein, DegV family COG1307
PNICKBOB_01576 5.2e-30 yitS S Uncharacterised protein, DegV family COG1307
PNICKBOB_01577 6.2e-246 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PNICKBOB_01578 1.9e-55 S Domain of unknown function (DUF4767)
PNICKBOB_01579 2.6e-163 L An automated process has identified a potential problem with this gene model
PNICKBOB_01580 4.6e-85 C nitroreductase
PNICKBOB_01581 7.7e-11 ypbG 2.7.1.2 GK ROK family
PNICKBOB_01582 9.2e-49 ypbG 2.7.1.2 GK ROK family
PNICKBOB_01583 9.4e-277 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PNICKBOB_01584 1.1e-129 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PNICKBOB_01585 4.9e-240 L Probable transposase
PNICKBOB_01586 3.5e-60 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PNICKBOB_01587 1.5e-135 gmuR K UTRA
PNICKBOB_01588 9.1e-122 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PNICKBOB_01589 7.9e-50 L COG2963 Transposase and inactivated derivatives
PNICKBOB_01590 1.4e-127 3.6.1.13, 3.6.1.55 F NUDIX domain
PNICKBOB_01591 1.4e-225 L Transposase
PNICKBOB_01592 1.2e-271 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PNICKBOB_01593 7.5e-108 pncA Q Isochorismatase family
PNICKBOB_01594 3.3e-101 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
PNICKBOB_01595 1.9e-96 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
PNICKBOB_01597 4.3e-109 K UTRA domain
PNICKBOB_01598 1.8e-59 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PNICKBOB_01599 3.6e-182 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PNICKBOB_01600 9.8e-18 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PNICKBOB_01601 0.0 L Transposase
PNICKBOB_01602 5.8e-234 L COG2963 Transposase and inactivated derivatives
PNICKBOB_01603 4.5e-174 S Aldo keto reductase
PNICKBOB_01604 1.7e-176 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
PNICKBOB_01605 1e-82
PNICKBOB_01606 2.3e-17 C FMN_bind
PNICKBOB_01607 4.5e-302 I Protein of unknown function (DUF2974)
PNICKBOB_01608 8.4e-107 3.6.1.55 F NUDIX domain
PNICKBOB_01609 1.8e-206 pbpX1 V Beta-lactamase
PNICKBOB_01610 1.6e-199 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PNICKBOB_01611 2.7e-61 aspC 2.6.1.1 E Aminotransferase
PNICKBOB_01612 2.7e-140 aspC 2.6.1.1 E Aminotransferase
PNICKBOB_01613 5.4e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PNICKBOB_01614 2.2e-176 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PNICKBOB_01615 2.1e-221 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PNICKBOB_01616 1.4e-77 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PNICKBOB_01617 9.4e-250 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PNICKBOB_01619 3.9e-72 L IS1381, transposase OrfA
PNICKBOB_01620 4.9e-251 lysC 2.7.2.4 E Belongs to the aspartokinase family
PNICKBOB_01621 1.2e-191 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PNICKBOB_01622 1.7e-182 yjeM E Amino Acid
PNICKBOB_01623 4.5e-46 yjeM E Amino Acid
PNICKBOB_01624 1.3e-105 engB D Necessary for normal cell division and for the maintenance of normal septation
PNICKBOB_01625 1.3e-235 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PNICKBOB_01626 6.4e-214 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PNICKBOB_01627 3.3e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PNICKBOB_01628 2.2e-151
PNICKBOB_01629 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PNICKBOB_01630 7e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PNICKBOB_01631 6.7e-35 rpsT J Binds directly to 16S ribosomal RNA
PNICKBOB_01632 4.8e-174 holA 2.7.7.7 L DNA polymerase III delta subunit
PNICKBOB_01633 0.0 comEC S Competence protein ComEC
PNICKBOB_01634 1.9e-84 comEA L Competence protein ComEA
PNICKBOB_01635 4.1e-192 ylbL T Belongs to the peptidase S16 family
PNICKBOB_01636 1.6e-85 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PNICKBOB_01637 2.2e-96 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PNICKBOB_01638 8.7e-54 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
PNICKBOB_01639 8e-208 ftsW D Belongs to the SEDS family
PNICKBOB_01640 0.0 typA T GTP-binding protein TypA
PNICKBOB_01641 8.9e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PNICKBOB_01642 4.2e-33 ykzG S Belongs to the UPF0356 family
PNICKBOB_01643 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PNICKBOB_01644 7.7e-20 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PNICKBOB_01645 3.5e-106 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PNICKBOB_01646 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PNICKBOB_01647 2e-104 S Repeat protein
PNICKBOB_01648 5.6e-126 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PNICKBOB_01649 1.2e-221 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PNICKBOB_01650 1.4e-56 XK27_04120 S Putative amino acid metabolism
PNICKBOB_01651 3.5e-216 iscS 2.8.1.7 E Aminotransferase class V
PNICKBOB_01652 3.8e-125 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PNICKBOB_01653 1.9e-39
PNICKBOB_01654 4.4e-103 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PNICKBOB_01655 2.1e-31 cspA K 'Cold-shock' DNA-binding domain
PNICKBOB_01656 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PNICKBOB_01657 1.4e-82 gpsB D DivIVA domain protein
PNICKBOB_01658 3.3e-149 ylmH S S4 domain protein
PNICKBOB_01659 9e-47 yggT S YGGT family
PNICKBOB_01660 1.3e-73 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PNICKBOB_01661 2.6e-207 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PNICKBOB_01662 1e-235 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PNICKBOB_01663 2.9e-151 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PNICKBOB_01664 1.8e-209 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PNICKBOB_01665 4.3e-261 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PNICKBOB_01666 7.1e-178 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PNICKBOB_01667 4.3e-47 ftsI 3.4.16.4 M Penicillin-binding Protein
PNICKBOB_01668 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PNICKBOB_01669 1.4e-54 ftsL D Cell division protein FtsL
PNICKBOB_01670 1.3e-182 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PNICKBOB_01671 1.8e-77 mraZ K Belongs to the MraZ family
PNICKBOB_01672 2.6e-163 L An automated process has identified a potential problem with this gene model
PNICKBOB_01673 2.2e-54 S Protein of unknown function (DUF3397)
PNICKBOB_01674 6.5e-13 S Protein of unknown function (DUF4044)
PNICKBOB_01675 7.8e-118 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_01676 4.6e-73 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_01677 1.1e-204 L COG3547 Transposase and inactivated derivatives
PNICKBOB_01678 2.9e-96 mreD
PNICKBOB_01679 7.9e-149 mreC M Involved in formation and maintenance of cell shape
PNICKBOB_01680 1.7e-174 mreB D cell shape determining protein MreB
PNICKBOB_01681 2.1e-114 radC L DNA repair protein
PNICKBOB_01682 5.7e-126 S Haloacid dehalogenase-like hydrolase
PNICKBOB_01683 2.1e-238 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PNICKBOB_01684 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PNICKBOB_01685 1.7e-166 L transposase, IS605 OrfB family
PNICKBOB_01686 1.2e-20 L transposase, IS605 OrfB family
PNICKBOB_01687 2.4e-36
PNICKBOB_01688 3.5e-244 L transposase, IS605 OrfB family
PNICKBOB_01689 1.2e-171 yfdH GT2 M Glycosyltransferase like family 2
PNICKBOB_01690 2.4e-66 2.4.1.83 GT2 S GtrA-like protein
PNICKBOB_01691 3.6e-34
PNICKBOB_01692 3.8e-43 K Helix-turn-helix XRE-family like proteins
PNICKBOB_01693 1.4e-127 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PNICKBOB_01694 6.3e-27 L Transposase
PNICKBOB_01695 2.4e-38 L PFAM transposase, IS4 family protein
PNICKBOB_01696 1.8e-27 L PFAM transposase, IS4 family protein
PNICKBOB_01697 1.3e-145
PNICKBOB_01698 2e-137 K Helix-turn-helix XRE-family like proteins
PNICKBOB_01699 1.7e-148 K Helix-turn-helix XRE-family like proteins
PNICKBOB_01700 1.4e-88 S Protein of unknown function (DUF3232)
PNICKBOB_01704 5.6e-17 rnhA 3.1.26.4 L Caulimovirus viroplasmin
PNICKBOB_01705 1.6e-08 rnhA 3.1.26.4 L Caulimovirus viroplasmin
PNICKBOB_01707 3e-18
PNICKBOB_01708 1.3e-201 L COG2826 Transposase and inactivated derivatives, IS30 family
PNICKBOB_01709 6.3e-162 L An automated process has identified a potential problem with this gene model
PNICKBOB_01710 5.1e-12
PNICKBOB_01711 6.7e-18
PNICKBOB_01712 1.8e-10
PNICKBOB_01713 3.7e-23
PNICKBOB_01714 2.1e-20
PNICKBOB_01717 2.6e-22
PNICKBOB_01718 8.5e-31
PNICKBOB_01719 1.5e-31 K Helix-turn-helix XRE-family like proteins
PNICKBOB_01720 1.8e-22 K Helix-turn-helix XRE-family like proteins
PNICKBOB_01721 1.9e-74 K Helix-turn-helix XRE-family like proteins
PNICKBOB_01722 1e-45 K Helix-turn-helix XRE-family like proteins
PNICKBOB_01723 1.5e-106 S Protein of unknown function (DUF3232)
PNICKBOB_01724 5.4e-56 S SLAP domain
PNICKBOB_01725 4.3e-36
PNICKBOB_01726 1.1e-26 K Helix-turn-helix XRE-family like proteins
PNICKBOB_01727 8e-131 L An automated process has identified a potential problem with this gene model
PNICKBOB_01728 2.1e-15 K Helix-turn-helix XRE-family like proteins
PNICKBOB_01729 1.2e-88 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PNICKBOB_01730 1.9e-33 S Protein of unknown function (DUF3232)
PNICKBOB_01731 5.8e-14 K Helix-turn-helix domain
PNICKBOB_01732 2.7e-227 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PNICKBOB_01733 1.3e-215 iscS2 2.8.1.7 E Aminotransferase class V
PNICKBOB_01734 3e-280 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PNICKBOB_01735 4.7e-111 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PNICKBOB_01736 2.7e-82 yueI S Protein of unknown function (DUF1694)
PNICKBOB_01737 1.2e-241 rarA L recombination factor protein RarA
PNICKBOB_01738 2.1e-34
PNICKBOB_01739 3.1e-78 usp6 T universal stress protein
PNICKBOB_01740 1.5e-217 rodA D Belongs to the SEDS family
PNICKBOB_01741 8.6e-34 S Protein of unknown function (DUF2969)
PNICKBOB_01742 3.8e-50 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PNICKBOB_01743 6.5e-179 mbl D Cell shape determining protein MreB Mrl
PNICKBOB_01744 1.7e-29 ywzB S Protein of unknown function (DUF1146)
PNICKBOB_01745 7.7e-55 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PNICKBOB_01746 6.3e-239 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PNICKBOB_01747 8.9e-173 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PNICKBOB_01748 2.2e-282 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PNICKBOB_01749 2.3e-93 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PNICKBOB_01750 9.5e-49 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PNICKBOB_01751 8.6e-29 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PNICKBOB_01752 7.6e-129 atpB C it plays a direct role in the translocation of protons across the membrane
PNICKBOB_01753 3.4e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PNICKBOB_01754 1.4e-189 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PNICKBOB_01755 6e-157 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PNICKBOB_01756 5.3e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PNICKBOB_01757 7.6e-114 tdk 2.7.1.21 F thymidine kinase
PNICKBOB_01758 3.1e-248 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
PNICKBOB_01761 1.6e-196 ampC V Beta-lactamase
PNICKBOB_01762 6e-54 L An automated process has identified a potential problem with this gene model
PNICKBOB_01763 3.8e-96 L An automated process has identified a potential problem with this gene model
PNICKBOB_01764 4.4e-14 EGP Major facilitator Superfamily
PNICKBOB_01765 2.4e-88 EGP Major facilitator Superfamily
PNICKBOB_01766 6.4e-262 pgi 5.3.1.9 G Belongs to the GPI family
PNICKBOB_01767 8.3e-108 vanZ V VanZ like family
PNICKBOB_01768 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PNICKBOB_01769 3.5e-219 L transposase, IS605 OrfB family
PNICKBOB_01770 2.8e-271 yclK 2.7.13.3 T Histidine kinase
PNICKBOB_01771 8.3e-131 K Transcriptional regulatory protein, C terminal
PNICKBOB_01772 2.4e-60 S SdpI/YhfL protein family
PNICKBOB_01773 1.7e-168 manA 5.3.1.8 G mannose-6-phosphate isomerase
PNICKBOB_01774 1.5e-71 patB 4.4.1.8 E Aminotransferase, class I
PNICKBOB_01775 5.6e-129 patB 4.4.1.8 E Aminotransferase, class I
PNICKBOB_01776 1.1e-31 M Protein of unknown function (DUF3737)
PNICKBOB_01777 7.9e-34 M Protein of unknown function (DUF3737)
PNICKBOB_01779 3.6e-224 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PNICKBOB_01780 1e-187 ytxK 2.1.1.72 L N-6 DNA Methylase
PNICKBOB_01781 8.9e-84 comGF U Putative Competence protein ComGF
PNICKBOB_01782 1e-41
PNICKBOB_01783 2.1e-73
PNICKBOB_01784 3.7e-44 comGC U competence protein ComGC
PNICKBOB_01785 9e-176 comGB NU type II secretion system
PNICKBOB_01786 8.4e-179 comGA NU Type II IV secretion system protein
PNICKBOB_01787 8.9e-133 yebC K Transcriptional regulatory protein
PNICKBOB_01788 4.6e-91 S VanZ like family
PNICKBOB_01789 2.9e-207 L transposase, IS605 OrfB family
PNICKBOB_01790 1.7e-56 E Amino acid permease
PNICKBOB_01791 2.2e-163 E Amino acid permease
PNICKBOB_01792 1.5e-16 E Amino acid permease
PNICKBOB_01793 5.8e-234 L COG2963 Transposase and inactivated derivatives
PNICKBOB_01794 5.9e-185 D Alpha beta
PNICKBOB_01795 4.3e-61 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PNICKBOB_01796 2.2e-39 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PNICKBOB_01797 3e-167 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PNICKBOB_01798 0.0 bglP G phosphotransferase system
PNICKBOB_01799 3e-63 licT K CAT RNA binding domain
PNICKBOB_01800 4.6e-64 licT K CAT RNA binding domain
PNICKBOB_01801 1.1e-206 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PNICKBOB_01802 1.4e-261 L Transposase IS66 family
PNICKBOB_01803 1.9e-30 S Transposase C of IS166 homeodomain
PNICKBOB_01804 2.5e-64 XK27_01125 L IS66 Orf2 like protein
PNICKBOB_01805 2e-17
PNICKBOB_01806 2.6e-70 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PNICKBOB_01807 1.1e-195 L COG2826 Transposase and inactivated derivatives, IS30 family
PNICKBOB_01808 7.1e-08 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PNICKBOB_01809 2.1e-118
PNICKBOB_01810 1.5e-149 S Sucrose-6F-phosphate phosphohydrolase
PNICKBOB_01811 1.1e-150 S hydrolase
PNICKBOB_01812 1.3e-257 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PNICKBOB_01813 9.2e-170 ybbR S YbbR-like protein
PNICKBOB_01814 4.2e-150 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PNICKBOB_01815 5.6e-208 potD P ABC transporter
PNICKBOB_01816 1.7e-132 potC P ABC transporter permease
PNICKBOB_01817 4.6e-130 potB P ABC transporter permease
PNICKBOB_01818 2e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PNICKBOB_01819 1.1e-164 murB 1.3.1.98 M Cell wall formation
PNICKBOB_01820 1.4e-98 dnaQ 2.7.7.7 L DNA polymerase III
PNICKBOB_01821 6.4e-90 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PNICKBOB_01822 1.6e-180 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PNICKBOB_01823 1.7e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PNICKBOB_01824 9.7e-158 ycsE S Sucrose-6F-phosphate phosphohydrolase
PNICKBOB_01825 4.8e-96
PNICKBOB_01826 2e-143 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PNICKBOB_01827 9.3e-228 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PNICKBOB_01828 1.3e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PNICKBOB_01829 3.6e-188 cggR K Putative sugar-binding domain
PNICKBOB_01831 5.2e-142 S Uncharacterised protein family (UPF0236)
PNICKBOB_01832 1.6e-25 S Uncharacterised protein family (UPF0236)
PNICKBOB_01833 3.4e-227 L Transposase
PNICKBOB_01834 6.3e-162 L An automated process has identified a potential problem with this gene model
PNICKBOB_01835 1.6e-63 K Helix-turn-helix XRE-family like proteins
PNICKBOB_01842 1.1e-57
PNICKBOB_01843 4.8e-15
PNICKBOB_01844 1.4e-184 L Transposase
PNICKBOB_01846 1.4e-26 L Transposase
PNICKBOB_01847 2e-72 L Transposase
PNICKBOB_01848 1e-135 ycaM E amino acid
PNICKBOB_01849 1.5e-59 ycaM E amino acid
PNICKBOB_01850 3e-34 S haloacid dehalogenase-like hydrolase
PNICKBOB_01851 2.1e-108 S haloacid dehalogenase-like hydrolase
PNICKBOB_01852 5.8e-234 L COG2963 Transposase and inactivated derivatives
PNICKBOB_01853 0.0 S SH3-like domain
PNICKBOB_01854 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PNICKBOB_01855 1.4e-170 whiA K May be required for sporulation
PNICKBOB_01856 2.6e-194 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PNICKBOB_01857 4.8e-165 rapZ S Displays ATPase and GTPase activities
PNICKBOB_01858 5.9e-81 S Short repeat of unknown function (DUF308)
PNICKBOB_01859 2.6e-266 S Uncharacterised protein family (UPF0236)
PNICKBOB_01860 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PNICKBOB_01861 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PNICKBOB_01862 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PNICKBOB_01863 8.9e-55 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PNICKBOB_01864 3e-187 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PNICKBOB_01865 3.2e-158 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PNICKBOB_01866 7.6e-180 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PNICKBOB_01867 5.1e-19
PNICKBOB_01868 2.3e-187 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PNICKBOB_01869 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PNICKBOB_01870 2.5e-95 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PNICKBOB_01871 2.6e-134 comFC S Competence protein
PNICKBOB_01872 1.3e-248 comFA L Helicase C-terminal domain protein
PNICKBOB_01873 4.8e-117 yvyE 3.4.13.9 S YigZ family
PNICKBOB_01874 1.9e-209 tagO 2.7.8.33, 2.7.8.35 M transferase
PNICKBOB_01875 9.5e-220 rny S Endoribonuclease that initiates mRNA decay
PNICKBOB_01876 2.5e-195 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PNICKBOB_01877 2.5e-98 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PNICKBOB_01878 7.5e-139 ymfM S Helix-turn-helix domain
PNICKBOB_01879 1.7e-131 IQ Enoyl-(Acyl carrier protein) reductase
PNICKBOB_01880 3.9e-237 S Peptidase M16
PNICKBOB_01881 1.8e-226 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
PNICKBOB_01882 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PNICKBOB_01883 1.4e-68 WQ51_03320 S Protein of unknown function (DUF1149)
PNICKBOB_01884 5.5e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PNICKBOB_01885 1.9e-212 yubA S AI-2E family transporter
PNICKBOB_01886 3.7e-23 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PNICKBOB_01887 1.5e-22 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PNICKBOB_01888 0.0 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
PNICKBOB_01889 8.8e-203 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PNICKBOB_01890 1.3e-109 S SNARE associated Golgi protein
PNICKBOB_01891 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
PNICKBOB_01892 1.5e-169 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PNICKBOB_01893 2.7e-154 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PNICKBOB_01894 2.1e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
PNICKBOB_01895 2.3e-113 yjbK S CYTH
PNICKBOB_01896 5.1e-113 yjbH Q Thioredoxin
PNICKBOB_01897 7.7e-160 coiA 3.6.4.12 S Competence protein
PNICKBOB_01898 2.5e-135 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PNICKBOB_01899 1e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PNICKBOB_01900 7.1e-306 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PNICKBOB_01901 2.5e-40 ptsH G phosphocarrier protein HPR
PNICKBOB_01902 4.1e-26
PNICKBOB_01903 6.2e-227 L DDE superfamily endonuclease
PNICKBOB_01904 0.0 clpE O Belongs to the ClpA ClpB family
PNICKBOB_01905 3.9e-44 XK27_09445 S Domain of unknown function (DUF1827)
PNICKBOB_01906 3.2e-305 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PNICKBOB_01907 1.2e-160 hlyX S Transporter associated domain
PNICKBOB_01908 1.3e-73
PNICKBOB_01909 1.9e-86
PNICKBOB_01910 6e-146 recX 2.4.1.337 GT4 S Regulatory protein RecX
PNICKBOB_01911 9.5e-261 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PNICKBOB_01912 5.1e-80 D Alpha beta
PNICKBOB_01913 6.8e-66 L An automated process has identified a potential problem with this gene model
PNICKBOB_01914 5.5e-15 L An automated process has identified a potential problem with this gene model
PNICKBOB_01915 6.5e-47
PNICKBOB_01916 2.1e-216 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PNICKBOB_01917 6.1e-219 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PNICKBOB_01918 9.3e-217 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
PNICKBOB_01919 4.7e-218 L transposase, IS605 OrfB family
PNICKBOB_01920 2.1e-168 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PNICKBOB_01921 1.6e-147 yihY S Belongs to the UPF0761 family
PNICKBOB_01922 8.5e-164 map 3.4.11.18 E Methionine Aminopeptidase
PNICKBOB_01923 1.6e-79 fld C Flavodoxin
PNICKBOB_01924 3.1e-90 gtcA S Teichoic acid glycosylation protein
PNICKBOB_01925 1e-215 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PNICKBOB_01926 1.2e-25
PNICKBOB_01928 6.4e-246 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PNICKBOB_01929 3.7e-208 yfmL 3.6.4.13 L DEAD DEAH box helicase
PNICKBOB_01930 3.4e-129 M Glycosyl hydrolases family 25
PNICKBOB_01931 2.3e-29 potE E amino acid
PNICKBOB_01932 6.3e-162 L An automated process has identified a potential problem with this gene model
PNICKBOB_01933 4.1e-190 potE E amino acid
PNICKBOB_01934 2.2e-102 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PNICKBOB_01935 3.1e-240 yhdP S Transporter associated domain
PNICKBOB_01936 1.3e-48 C nitroreductase
PNICKBOB_01937 2.5e-18 C nitroreductase
PNICKBOB_01938 1.8e-38
PNICKBOB_01939 1e-240 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_01940 1.1e-161 rssA S Phospholipase, patatin family
PNICKBOB_01941 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PNICKBOB_01942 2.1e-132 glcR K DeoR C terminal sensor domain
PNICKBOB_01943 1.3e-63 S Enterocin A Immunity
PNICKBOB_01944 2.5e-55 yitW S Iron-sulfur cluster assembly protein
PNICKBOB_01945 3.2e-272 sufB O assembly protein SufB
PNICKBOB_01946 3.8e-81 nifU C SUF system FeS assembly protein, NifU family
PNICKBOB_01947 1.2e-235 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PNICKBOB_01948 1.8e-229 sufD O FeS assembly protein SufD
PNICKBOB_01949 3.4e-146 sufC O FeS assembly ATPase SufC
PNICKBOB_01950 3.4e-23 L An automated process has identified a potential problem with this gene model
PNICKBOB_01951 2.7e-51 L An automated process has identified a potential problem with this gene model
PNICKBOB_01952 5.4e-155 S hydrolase
PNICKBOB_01953 4.8e-38 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
PNICKBOB_01954 1.5e-195 L transposase, IS605 OrfB family
PNICKBOB_01956 1.5e-74 gntR K UbiC transcription regulator-associated domain protein
PNICKBOB_01957 7.6e-21 gntR K UbiC transcription regulator-associated domain protein
PNICKBOB_01958 4.8e-176 rihB 3.2.2.1 F Nucleoside
PNICKBOB_01959 0.0 kup P Transport of potassium into the cell
PNICKBOB_01960 9e-127 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PNICKBOB_01961 1.2e-166 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PNICKBOB_01962 1.6e-162 2.7.7.12 C Domain of unknown function (DUF4931)
PNICKBOB_01963 3.9e-72 L IS1381, transposase OrfA
PNICKBOB_01964 4.5e-195 S Uncharacterised protein family (UPF0236)
PNICKBOB_01965 1.1e-33 S Uncharacterised protein family (UPF0236)
PNICKBOB_01966 8.6e-41 gcvR T Belongs to the UPF0237 family
PNICKBOB_01967 1.3e-246 XK27_08635 S UPF0210 protein
PNICKBOB_01968 1.8e-237 G Bacterial extracellular solute-binding protein
PNICKBOB_01969 1.7e-218 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_01970 5.5e-62 S Protein of unknown function (DUF2974)
PNICKBOB_01971 2.8e-109 glnP P ABC transporter permease
PNICKBOB_01972 9.6e-107 gluC P ABC transporter permease
PNICKBOB_01973 1.5e-152 glnH ET ABC transporter substrate-binding protein
PNICKBOB_01974 3.3e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PNICKBOB_01975 7.6e-103 S ABC-type cobalt transport system, permease component
PNICKBOB_01976 0.0 V ABC transporter transmembrane region
PNICKBOB_01977 1.9e-290 XK27_09600 V ABC transporter, ATP-binding protein
PNICKBOB_01978 8.8e-81 K Transcriptional regulator, MarR family
PNICKBOB_01979 9.3e-147 glnH ET ABC transporter
PNICKBOB_01980 8.4e-130 yfeJ 6.3.5.2 F glutamine amidotransferase
PNICKBOB_01981 1.5e-123
PNICKBOB_01982 6.2e-11
PNICKBOB_01983 3.4e-310 ybiT S ABC transporter, ATP-binding protein
PNICKBOB_01984 3.9e-209 pepA E M42 glutamyl aminopeptidase
PNICKBOB_01985 9.7e-113 mdtG EGP Major facilitator Superfamily
PNICKBOB_01986 2.9e-260 emrY EGP Major facilitator Superfamily
PNICKBOB_01987 1.8e-90 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PNICKBOB_01988 4.7e-241 pyrP F Permease
PNICKBOB_01989 1.2e-72 S reductase
PNICKBOB_01990 3.1e-215 L transposase, IS605 OrfB family
PNICKBOB_01991 8.4e-51 emrY EGP Major facilitator Superfamily
PNICKBOB_01992 1e-64 emrY EGP Major facilitator Superfamily
PNICKBOB_01997 6e-96 MA20_25245 K Acetyltransferase (GNAT) domain
PNICKBOB_02000 2e-29 cspA K Cold shock protein
PNICKBOB_02001 2.6e-115 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PNICKBOB_02002 7.5e-39 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PNICKBOB_02003 9.3e-152 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
PNICKBOB_02004 1.5e-230 mtnE 2.6.1.83 E Aminotransferase
PNICKBOB_02005 3.8e-184 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PNICKBOB_02006 6.6e-119 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PNICKBOB_02007 3.7e-257 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PNICKBOB_02008 3.5e-247 nhaC C Na H antiporter NhaC
PNICKBOB_02009 3.5e-55
PNICKBOB_02010 4.9e-120 ybhL S Belongs to the BI1 family
PNICKBOB_02011 1.4e-114 S Protein of unknown function (DUF1211)
PNICKBOB_02012 1e-170 yegS 2.7.1.107 G Lipid kinase
PNICKBOB_02013 2.9e-276 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PNICKBOB_02014 9.9e-261 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PNICKBOB_02015 5.2e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PNICKBOB_02016 3.2e-209 camS S sex pheromone
PNICKBOB_02017 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PNICKBOB_02018 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PNICKBOB_02019 1.2e-104 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
PNICKBOB_02021 2.1e-87 ydcK S Belongs to the SprT family
PNICKBOB_02022 1.3e-136 M Glycosyltransferase sugar-binding region containing DXD motif
PNICKBOB_02023 2.6e-261 epsU S Polysaccharide biosynthesis protein
PNICKBOB_02024 5.6e-225 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PNICKBOB_02025 9.3e-56 pacL 3.6.3.8 P P-type ATPase
PNICKBOB_02026 6.6e-100 pacL 3.6.3.8 P P-type ATPase
PNICKBOB_02027 9e-204 pacL 3.6.3.8 P P-type ATPase
PNICKBOB_02028 1.6e-57 pacL 3.6.3.8 P P-type ATPase
PNICKBOB_02029 2.4e-215 L Probable transposase
PNICKBOB_02030 2.7e-154 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PNICKBOB_02031 1.2e-285 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PNICKBOB_02032 8.3e-207 csaB M Glycosyl transferases group 1
PNICKBOB_02033 8.6e-136 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PNICKBOB_02034 6.8e-190 L transposase, IS605 OrfB family
PNICKBOB_02035 1.8e-55 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
PNICKBOB_02036 3e-122 gntR1 K UTRA
PNICKBOB_02037 6e-213
PNICKBOB_02040 1.2e-92
PNICKBOB_02041 6.1e-149 slpX S SLAP domain
PNICKBOB_02042 9.5e-11 pfoS S Phosphotransferase system, EIIC
PNICKBOB_02043 9e-78 pfoS S Phosphotransferase system, EIIC
PNICKBOB_02044 1.5e-19 pfoS S Phosphotransferase system, EIIC
PNICKBOB_02046 4.7e-22 L COG2826 Transposase and inactivated derivatives, IS30 family
PNICKBOB_02047 1.7e-133 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PNICKBOB_02048 1.7e-229 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
PNICKBOB_02049 9e-112 G Phosphoglycerate mutase family
PNICKBOB_02050 1.7e-196 D nuclear chromosome segregation
PNICKBOB_02051 5.8e-65 M LysM domain protein
PNICKBOB_02052 5.6e-13
PNICKBOB_02053 2.7e-21 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
PNICKBOB_02054 1.1e-47 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
PNICKBOB_02055 3.9e-29 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
PNICKBOB_02056 5.4e-68
PNICKBOB_02057 7.1e-32
PNICKBOB_02058 4.1e-71 S Iron-sulphur cluster biosynthesis
PNICKBOB_02059 0.0 L Transposase
PNICKBOB_02060 1.1e-204 L COG3547 Transposase and inactivated derivatives
PNICKBOB_02061 6.2e-111 L Probable transposase
PNICKBOB_02062 1.2e-104 L Probable transposase
PNICKBOB_02063 1.5e-227 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PNICKBOB_02064 4.3e-77 XK27_08435 K UTRA
PNICKBOB_02065 3.2e-220 L transposase, IS605 OrfB family
PNICKBOB_02066 1.6e-32 XK27_08435 K UTRA
PNICKBOB_02067 2.8e-62 L Transposase
PNICKBOB_02068 9.9e-97 L Transposase
PNICKBOB_02071 9.8e-52 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PNICKBOB_02072 5.3e-141 S Uncharacterized protein conserved in bacteria (DUF2263)
PNICKBOB_02073 3.6e-42
PNICKBOB_02074 6e-16 lhr L DEAD DEAH box helicase
PNICKBOB_02075 1.2e-205 L transposase, IS605 OrfB family
PNICKBOB_02076 2.8e-29 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
PNICKBOB_02077 8.6e-105 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
PNICKBOB_02078 2.4e-95 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
PNICKBOB_02079 6.1e-65 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
PNICKBOB_02080 2.9e-37
PNICKBOB_02081 1.5e-109 4.1.1.44 S Carboxymuconolactone decarboxylase family
PNICKBOB_02082 1.8e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PNICKBOB_02083 3.4e-91 S LPXTG cell wall anchor motif
PNICKBOB_02084 8.7e-72
PNICKBOB_02085 2.2e-45 yagE E amino acid
PNICKBOB_02086 8.8e-47
PNICKBOB_02087 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PNICKBOB_02088 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PNICKBOB_02089 8.3e-241 cycA E Amino acid permease
PNICKBOB_02090 1.6e-88 maa S transferase hexapeptide repeat
PNICKBOB_02091 3e-67 K Transcriptional regulator
PNICKBOB_02092 4.3e-62 K Transcriptional regulator
PNICKBOB_02093 2.2e-63 manO S Domain of unknown function (DUF956)
PNICKBOB_02094 1.2e-174 manN G system, mannose fructose sorbose family IID component
PNICKBOB_02095 9e-134 manY G PTS system
PNICKBOB_02096 3.6e-188 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PNICKBOB_02097 1.8e-16 rafA 3.2.1.22 G alpha-galactosidase
PNICKBOB_02098 6.1e-157 L An automated process has identified a potential problem with this gene model
PNICKBOB_02099 7.2e-34 scrB 3.2.1.26 GH32 G invertase
PNICKBOB_02100 6.2e-67 msmR7 K helix_turn_helix, arabinose operon control protein
PNICKBOB_02102 2.4e-83 S COG NOG38524 non supervised orthologous group
PNICKBOB_02103 5.3e-79
PNICKBOB_02104 1.1e-250 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PNICKBOB_02105 1.2e-97 J Acetyltransferase (GNAT) domain
PNICKBOB_02106 2.3e-110 yjbF S SNARE associated Golgi protein
PNICKBOB_02107 2.6e-154 I alpha/beta hydrolase fold
PNICKBOB_02108 1.3e-126 hipB K Helix-turn-helix
PNICKBOB_02109 1.3e-262 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
PNICKBOB_02110 7.8e-159
PNICKBOB_02111 0.0 ydgH S MMPL family
PNICKBOB_02112 2.5e-98 yobS K Bacterial regulatory proteins, tetR family
PNICKBOB_02113 4.7e-158 3.5.2.6 V Beta-lactamase enzyme family
PNICKBOB_02114 7.4e-161 corA P CorA-like Mg2+ transporter protein
PNICKBOB_02115 1.8e-237 G Bacterial extracellular solute-binding protein
PNICKBOB_02116 3.9e-72 L IS1381, transposase OrfA
PNICKBOB_02117 3.6e-254 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
PNICKBOB_02118 1.6e-146 gtsC P Binding-protein-dependent transport system inner membrane component
PNICKBOB_02119 5.6e-158 gtsB P ABC-type sugar transport systems, permease components
PNICKBOB_02120 1.4e-203 malK P ATPases associated with a variety of cellular activities
PNICKBOB_02121 1.1e-280 pipD E Dipeptidase
PNICKBOB_02122 8.5e-159 endA F DNA RNA non-specific endonuclease
PNICKBOB_02123 9.8e-164 dnaQ 2.7.7.7 L EXOIII
PNICKBOB_02124 8.1e-159 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PNICKBOB_02125 1.6e-194 L Probable transposase
PNICKBOB_02126 1e-41 S Protein of unknown function (DUF3290)
PNICKBOB_02127 1.3e-11 S Protein of unknown function (DUF3290)
PNICKBOB_02128 8.4e-139 pnuC H nicotinamide mononucleotide transporter
PNICKBOB_02129 4.4e-163 L An automated process has identified a potential problem with this gene model
PNICKBOB_02130 2.9e-277 V ABC transporter transmembrane region
PNICKBOB_02131 9.3e-180 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
PNICKBOB_02132 6e-188 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PNICKBOB_02133 2.3e-95 F Nucleoside 2-deoxyribosyltransferase
PNICKBOB_02134 4.9e-257 L DDE superfamily endonuclease
PNICKBOB_02135 1.7e-13 S Peptidase propeptide and YPEB domain
PNICKBOB_02136 1.5e-65 S Peptidase propeptide and YPEB domain
PNICKBOB_02137 5.5e-242 L DDE superfamily endonuclease
PNICKBOB_02138 3.1e-245 G Bacterial extracellular solute-binding protein
PNICKBOB_02139 2.9e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PNICKBOB_02140 2.3e-170 coaA 2.7.1.33 F Pantothenic acid kinase
PNICKBOB_02141 2.5e-103 E GDSL-like Lipase/Acylhydrolase
PNICKBOB_02142 2.2e-78 yjcF S Acetyltransferase (GNAT) domain
PNICKBOB_02143 6.1e-151 aatB ET ABC transporter substrate-binding protein
PNICKBOB_02144 6.9e-110 glnQ 3.6.3.21 E ABC transporter
PNICKBOB_02145 1.2e-109 glnP P ABC transporter permease
PNICKBOB_02146 0.0 helD 3.6.4.12 L DNA helicase
PNICKBOB_02147 3.4e-126 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
PNICKBOB_02148 1.1e-126 pgm3 G Phosphoglycerate mutase family
PNICKBOB_02149 0.0 V FtsX-like permease family
PNICKBOB_02150 2.4e-133 cysA V ABC transporter, ATP-binding protein
PNICKBOB_02151 4.5e-241 S response to antibiotic
PNICKBOB_02152 4.8e-125
PNICKBOB_02153 6.7e-16
PNICKBOB_02154 2.7e-188 ansA 3.5.1.1 EJ L-asparaginase, type I
PNICKBOB_02155 4.5e-40
PNICKBOB_02156 1.9e-46
PNICKBOB_02157 8e-86 L An automated process has identified a potential problem with this gene model
PNICKBOB_02158 2.7e-227 L Transposase
PNICKBOB_02159 1.2e-274 E Amino acid permease
PNICKBOB_02160 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PNICKBOB_02161 2.5e-166 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PNICKBOB_02162 3.3e-97
PNICKBOB_02163 2.4e-86 L COG2826 Transposase and inactivated derivatives, IS30 family
PNICKBOB_02164 2e-73 L COG2826 Transposase and inactivated derivatives, IS30 family
PNICKBOB_02165 3.9e-220 S Membrane protein involved in the export of O-antigen and teichoic acid
PNICKBOB_02166 2.9e-145 L COG2826 Transposase and inactivated derivatives, IS30 family
PNICKBOB_02167 1.5e-66 M Glycosyltransferase like family 2
PNICKBOB_02168 3.2e-32 L COG2826 Transposase and inactivated derivatives, IS30 family
PNICKBOB_02169 2.9e-145 L COG2826 Transposase and inactivated derivatives, IS30 family
PNICKBOB_02170 1.4e-95 L An automated process has identified a potential problem with this gene model
PNICKBOB_02171 2.7e-43 M Glycosyltransferase like family 2
PNICKBOB_02172 9.8e-203 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PNICKBOB_02173 1.4e-55 pglI 2.4.1.293 GT2 M Glycosyl transferase family 2
PNICKBOB_02174 6.9e-46 rgpF GT2,GT4 M transferase activity, transferring glycosyl groups
PNICKBOB_02175 5e-35 M -O-antigen
PNICKBOB_02177 1.6e-125 GT4 M Glycosyltransferase Family 4
PNICKBOB_02178 3.1e-119 M Domain of unknown function (DUF1972)
PNICKBOB_02179 9.1e-121 rfbP M Bacterial sugar transferase
PNICKBOB_02180 2.4e-144 ywqE 3.1.3.48 GM PHP domain protein
PNICKBOB_02181 5.1e-118 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PNICKBOB_02182 1.7e-138 epsB M biosynthesis protein
PNICKBOB_02183 4.1e-179 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PNICKBOB_02184 1.5e-199 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PNICKBOB_02185 2.4e-130 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_02186 1.1e-204 L COG3547 Transposase and inactivated derivatives
PNICKBOB_02188 7.4e-140 M NlpC/P60 family
PNICKBOB_02189 2.1e-15
PNICKBOB_02190 5.1e-221 L COG2963 Transposase and inactivated derivatives
PNICKBOB_02191 5e-123 M NlpC P60 family protein
PNICKBOB_02192 1.9e-45 S Archaea bacterial proteins of unknown function
PNICKBOB_02193 6.3e-31 S Archaea bacterial proteins of unknown function
PNICKBOB_02194 1.9e-90 M NlpC/P60 family
PNICKBOB_02195 1.2e-94 gmk2 2.7.4.8 F Guanylate kinase homologues.
PNICKBOB_02196 1.6e-35
PNICKBOB_02197 3.8e-279 S O-antigen ligase like membrane protein
PNICKBOB_02198 2.7e-100
PNICKBOB_02199 3.7e-174 L transposase, IS605 OrfB family
PNICKBOB_02200 9.5e-20 L Putative transposase DNA-binding domain
PNICKBOB_02201 4.5e-50
PNICKBOB_02202 8.2e-67
PNICKBOB_02203 1e-218 L transposase, IS605 OrfB family
PNICKBOB_02204 2.8e-82 S Threonine/Serine exporter, ThrE
PNICKBOB_02205 7.9e-140 thrE S Putative threonine/serine exporter
PNICKBOB_02206 1.1e-292 S ABC transporter
PNICKBOB_02207 1.7e-55
PNICKBOB_02208 1.4e-101 rimL J Acetyltransferase (GNAT) domain
PNICKBOB_02209 2.1e-86 S Protein of unknown function (DUF554)
PNICKBOB_02210 3.8e-216 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PNICKBOB_02211 0.0 pepF E oligoendopeptidase F
PNICKBOB_02212 1.5e-09 Z012_06740 S Fic/DOC family
PNICKBOB_02213 5.4e-62 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNICKBOB_02214 6e-239 ydjN U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PNICKBOB_02215 1.1e-131 znuB U ABC 3 transport family
PNICKBOB_02216 2.5e-118 fhuC P ABC transporter
PNICKBOB_02217 2.7e-169 psaA P Belongs to the bacterial solute-binding protein 9 family
PNICKBOB_02218 1e-41 K helix_turn_helix, Arsenical Resistance Operon Repressor
PNICKBOB_02219 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
PNICKBOB_02220 5.3e-167 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PNICKBOB_02221 1.8e-139 fruR K DeoR C terminal sensor domain
PNICKBOB_02224 8.7e-27
PNICKBOB_02225 7.1e-33
PNICKBOB_02226 1e-34 yozG K Transcriptional regulator
PNICKBOB_02227 8.1e-54 S Enterocin A Immunity
PNICKBOB_02228 1.3e-13 S Enterocin A Immunity
PNICKBOB_02229 2.6e-114 S Archaea bacterial proteins of unknown function
PNICKBOB_02230 4.2e-146 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PNICKBOB_02231 3.2e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PNICKBOB_02232 1.4e-209 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
PNICKBOB_02233 5.1e-122 K response regulator
PNICKBOB_02234 0.0 V ABC transporter
PNICKBOB_02235 5.8e-308 V ABC transporter, ATP-binding protein
PNICKBOB_02236 8.9e-139 XK27_01040 S Protein of unknown function (DUF1129)
PNICKBOB_02237 2.1e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PNICKBOB_02238 2.1e-44 yyzM S Bacterial protein of unknown function (DUF951)
PNICKBOB_02239 2.9e-154 spo0J K Belongs to the ParB family
PNICKBOB_02240 3.4e-138 soj D Sporulation initiation inhibitor
PNICKBOB_02241 1.6e-149 noc K Belongs to the ParB family
PNICKBOB_02242 1.4e-130 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PNICKBOB_02243 6.6e-85 cvpA S Colicin V production protein
PNICKBOB_02244 1.7e-181 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PNICKBOB_02245 6.7e-150 3.1.3.48 T Tyrosine phosphatase family
PNICKBOB_02246 2e-97 azr 1.5.1.36 S NADPH-dependent FMN reductase
PNICKBOB_02247 5.8e-97 nqr 1.5.1.36 S NADPH-dependent FMN reductase
PNICKBOB_02248 9.1e-36 S Uncharacterised protein family (UPF0236)
PNICKBOB_02249 1.5e-215 G Major Facilitator Superfamily
PNICKBOB_02250 1.1e-259 S Uncharacterised protein family (UPF0236)
PNICKBOB_02251 7.4e-112 K WHG domain
PNICKBOB_02252 2.8e-38
PNICKBOB_02253 4.3e-277 pipD E Dipeptidase
PNICKBOB_02254 8.8e-119 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PNICKBOB_02255 9.5e-168 hrtB V ABC transporter permease
PNICKBOB_02256 4.1e-95 ygfC K Bacterial regulatory proteins, tetR family
PNICKBOB_02257 9.3e-112 G phosphoglycerate mutase
PNICKBOB_02258 1.7e-142 aroD S Alpha/beta hydrolase family
PNICKBOB_02259 6.9e-144 S Belongs to the UPF0246 family
PNICKBOB_02260 2e-120
PNICKBOB_02261 2.9e-84 2.7.7.12 C Domain of unknown function (DUF4931)
PNICKBOB_02262 5.8e-42 L transposase, IS605 OrfB family
PNICKBOB_02263 9.2e-98 dtpT U amino acid peptide transporter
PNICKBOB_02264 0.0 pepN 3.4.11.2 E aminopeptidase
PNICKBOB_02265 5e-60 lysM M LysM domain
PNICKBOB_02266 5.8e-234 L COG2963 Transposase and inactivated derivatives
PNICKBOB_02268 1.2e-13 L Transposase
PNICKBOB_02269 2.4e-181 L Transposase
PNICKBOB_02270 1.9e-48 L COG2826 Transposase and inactivated derivatives, IS30 family
PNICKBOB_02271 3.9e-72 L IS1381, transposase OrfA
PNICKBOB_02272 4.7e-288 V ABC transporter transmembrane region
PNICKBOB_02273 0.0 2.7.7.73, 2.7.7.80 H ThiF family
PNICKBOB_02275 2.7e-263 lsa S ABC transporter
PNICKBOB_02276 3.9e-72 L IS1381, transposase OrfA
PNICKBOB_02277 4.5e-29 S Enterocin A Immunity
PNICKBOB_02278 7e-36 L Transposase
PNICKBOB_02279 2.6e-177 L Transposase
PNICKBOB_02280 1.2e-36 L Transposase
PNICKBOB_02281 1.4e-248 L Transposase
PNICKBOB_02282 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PNICKBOB_02283 9.3e-74 nrdI F Probably involved in ribonucleotide reductase function
PNICKBOB_02284 7.3e-194 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PNICKBOB_02285 9.8e-18 IQ reductase
PNICKBOB_02286 3.3e-95 cysE 2.3.1.30 E Bacterial transferase hexapeptide (six repeats)
PNICKBOB_02287 7e-220 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PNICKBOB_02288 3e-170 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PNICKBOB_02289 2.2e-265 S Uncharacterised protein family (UPF0236)
PNICKBOB_02290 4.3e-23
PNICKBOB_02291 3.6e-35 S Uncharacterised protein family (UPF0236)
PNICKBOB_02293 5.6e-10
PNICKBOB_02294 2e-227 L Transposase
PNICKBOB_02295 2.6e-286 V ABC-type multidrug transport system, ATPase and permease components
PNICKBOB_02296 1.1e-271 V ABC-type multidrug transport system, ATPase and permease components
PNICKBOB_02298 7.9e-188 2.7.7.73, 2.7.7.80 H Involved in molybdopterin and thiamine biosynthesis, family 2
PNICKBOB_02302 0.0 L Transposase
PNICKBOB_02303 5.8e-234 L COG2963 Transposase and inactivated derivatives
PNICKBOB_02304 2.1e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
PNICKBOB_02305 8e-42 S RelB antitoxin
PNICKBOB_02306 2.8e-100 L Integrase
PNICKBOB_02307 7.2e-47
PNICKBOB_02308 2.8e-84 FG adenosine 5'-monophosphoramidase activity
PNICKBOB_02309 5.1e-135 L Psort location Cytoplasmic, score
PNICKBOB_02310 1.6e-42 L Psort location Cytoplasmic, score
PNICKBOB_02311 1.7e-38 S Antitoxin component of a toxin-antitoxin (TA) module
PNICKBOB_02312 1.8e-50 S YoeB-like toxin of bacterial type II toxin-antitoxin system
PNICKBOB_02313 3.6e-119 3.1.21.3 V Type I restriction modification DNA specificity domain
PNICKBOB_02315 1.5e-182 L Lactococcus lactis RepB C-terminus
PNICKBOB_02317 3.4e-62 XK27_09990 D Fic/DOC family
PNICKBOB_02318 3.4e-109
PNICKBOB_02319 9.2e-199 D Relaxase/Mobilisation nuclease domain
PNICKBOB_02320 4.7e-58 mobC S Bacterial mobilisation protein (MobC)
PNICKBOB_02322 9.3e-64 L transposase activity
PNICKBOB_02325 5.4e-22 L Phage integrase family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)