ORF_ID e_value Gene_name EC_number CAZy COGs Description
GIFHNECI_00001 3.8e-66 G carbohydrate transport
GIFHNECI_00002 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GIFHNECI_00003 9.3e-124 G ABC transporter permease
GIFHNECI_00004 2.9e-190 K Periplasmic binding protein domain
GIFHNECI_00005 8.5e-20 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
GIFHNECI_00006 0.0 3.2.1.51 GH29 G Alpha-L-fucosidase
GIFHNECI_00007 1.1e-17 L Helix-turn-helix domain
GIFHNECI_00008 4.4e-18 S Protein of unknown function (DUF2442)
GIFHNECI_00009 2.6e-16 K Helix-turn-helix domain
GIFHNECI_00010 8.4e-107 L Belongs to the 'phage' integrase family
GIFHNECI_00011 5.8e-57 3.1.21.3 V Type I restriction modification DNA specificity domain
GIFHNECI_00012 2.1e-41 3.1.21.3 L PFAM restriction modification system DNA specificity domain
GIFHNECI_00013 2.6e-243 hsdM 2.1.1.72 V HsdM N-terminal domain
GIFHNECI_00014 0.0 hsdR 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
GIFHNECI_00015 4.2e-49 L Transposase and inactivated derivatives IS30 family
GIFHNECI_00016 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GIFHNECI_00017 3.8e-55 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
GIFHNECI_00018 7.1e-275 aldH 1.2.1.3, 1.2.1.5 C Aldehyde dehydrogenase family
GIFHNECI_00019 5.9e-126 XK27_08050 O prohibitin homologues
GIFHNECI_00020 2.2e-243 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
GIFHNECI_00021 5.4e-231 metC 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
GIFHNECI_00022 2.1e-260 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
GIFHNECI_00023 1.8e-226 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
GIFHNECI_00024 3e-112 macB_2 V ATPases associated with a variety of cellular activities
GIFHNECI_00025 0.0 ctpE P E1-E2 ATPase
GIFHNECI_00026 6.2e-49 racA K MerR, DNA binding
GIFHNECI_00027 1.6e-196 yghZ C Aldo/keto reductase family
GIFHNECI_00028 5.1e-101 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
GIFHNECI_00029 1.1e-250 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
GIFHNECI_00030 1.1e-149 map 3.4.11.18 E Methionine aminopeptidase
GIFHNECI_00031 5e-125 S Short repeat of unknown function (DUF308)
GIFHNECI_00032 0.0 pepO 3.4.24.71 O Peptidase family M13
GIFHNECI_00033 1.6e-120 L Single-strand binding protein family
GIFHNECI_00034 9e-170
GIFHNECI_00035 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
GIFHNECI_00037 7.9e-271 recD2 3.6.4.12 L PIF1-like helicase
GIFHNECI_00038 2.6e-160 supH S Sucrose-6F-phosphate phosphohydrolase
GIFHNECI_00039 5.9e-120 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
GIFHNECI_00040 2.8e-43 KT Transcriptional regulatory protein, C terminal
GIFHNECI_00041 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
GIFHNECI_00042 3.5e-288 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
GIFHNECI_00043 6.2e-192 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
GIFHNECI_00044 5.2e-116 ywlC 2.7.7.87 J Belongs to the SUA5 family
GIFHNECI_00045 9.2e-55 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
GIFHNECI_00046 1.2e-185 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
GIFHNECI_00047 1.2e-189 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GIFHNECI_00048 3.9e-36 rpmE J Binds the 23S rRNA
GIFHNECI_00050 9e-195 K helix_turn_helix, arabinose operon control protein
GIFHNECI_00051 2.6e-163 glcU G Sugar transport protein
GIFHNECI_00052 2.6e-178 iolG 1.1.1.18, 1.1.1.369 S Oxidoreductase family, C-terminal alpha/beta domain
GIFHNECI_00053 3.9e-256 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
GIFHNECI_00054 2.1e-107
GIFHNECI_00055 4.1e-169 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
GIFHNECI_00056 3.6e-141 3.5.2.6 V Beta-lactamase enzyme family
GIFHNECI_00057 0.0 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
GIFHNECI_00058 4.2e-164 EG EamA-like transporter family
GIFHNECI_00059 2.3e-143 V FtsX-like permease family
GIFHNECI_00060 2.6e-147 S Sulfite exporter TauE/SafE
GIFHNECI_00062 1.6e-28 L Transposase
GIFHNECI_00063 3.4e-216 MA20_36090 S Psort location Cytoplasmic, score 8.87
GIFHNECI_00064 3.4e-252 metY 2.5.1.49 H Psort location Cytoplasmic, score 9.98
GIFHNECI_00065 2.1e-35 1.1.1.122, 1.1.1.65 C Aldo/keto reductase family
GIFHNECI_00066 1.2e-72 EGP Major facilitator superfamily
GIFHNECI_00067 3.7e-179 glkA 2.7.1.2 G ROK family
GIFHNECI_00068 2e-299 S ATPases associated with a variety of cellular activities
GIFHNECI_00069 7.9e-47 EGP Major facilitator Superfamily
GIFHNECI_00070 2.4e-158 I alpha/beta hydrolase fold
GIFHNECI_00071 6.7e-113 S Pyridoxamine 5'-phosphate oxidase
GIFHNECI_00073 3.4e-49 S DUF218 domain
GIFHNECI_00074 6.2e-39 S Protein of unknown function (DUF979)
GIFHNECI_00075 4.4e-115 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GIFHNECI_00076 5.7e-126
GIFHNECI_00077 1.3e-45 M domain, Protein
GIFHNECI_00078 4e-19 M domain, Protein
GIFHNECI_00079 2.4e-306 yjjK S ATP-binding cassette protein, ChvD family
GIFHNECI_00080 0.0 3.2.1.52, 3.2.1.83 GH16,GH20 G hydrolase family 20, catalytic
GIFHNECI_00081 7.1e-172 tesB I Thioesterase-like superfamily
GIFHNECI_00082 3e-77 S Protein of unknown function (DUF3180)
GIFHNECI_00083 1.8e-292 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
GIFHNECI_00084 6.2e-165 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
GIFHNECI_00085 4.5e-100 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
GIFHNECI_00086 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GIFHNECI_00087 9.4e-98 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
GIFHNECI_00088 6e-213 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
GIFHNECI_00089 1.7e-260 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
GIFHNECI_00090 5e-309
GIFHNECI_00091 1.7e-168 natA V ATPases associated with a variety of cellular activities
GIFHNECI_00092 1.8e-231 epsG M Glycosyl transferase family 21
GIFHNECI_00093 4.3e-273 S AI-2E family transporter
GIFHNECI_00094 4.3e-177 3.4.14.13 M Glycosyltransferase like family 2
GIFHNECI_00095 8.1e-205 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
GIFHNECI_00098 1.1e-45 S Domain of unknown function (DUF4190)
GIFHNECI_00099 6.9e-200 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
GIFHNECI_00100 5.3e-175 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
GIFHNECI_00102 2.4e-15 S Transcription factor WhiB
GIFHNECI_00103 2.1e-266 lacS G Psort location CytoplasmicMembrane, score 10.00
GIFHNECI_00104 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GIFHNECI_00105 7.4e-86 nagA 3.5.1.25 G Amidohydrolase family
GIFHNECI_00106 4.6e-180 lacR K Transcriptional regulator, LacI family
GIFHNECI_00107 3.7e-65 L Transposase, Mutator family
GIFHNECI_00108 6.2e-117 O Subtilase family
GIFHNECI_00109 1.4e-147 L Transposase, Mutator family
GIFHNECI_00110 1.5e-12 S Psort location CytoplasmicMembrane, score 9.99
GIFHNECI_00111 2.9e-201 S AAA domain, putative AbiEii toxin, Type IV TA system
GIFHNECI_00112 2.3e-96 S RloB-like protein
GIFHNECI_00113 4.7e-220 vex3 V ABC transporter permease
GIFHNECI_00114 1e-210 vex1 V Efflux ABC transporter, permease protein
GIFHNECI_00115 9.9e-112 vex2 V ABC transporter, ATP-binding protein
GIFHNECI_00116 2.8e-45 azlD E Branched-chain amino acid transport protein (AzlD)
GIFHNECI_00117 2e-194 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
GIFHNECI_00118 2.1e-96 ptpA 3.1.3.48 T low molecular weight
GIFHNECI_00119 4.6e-128 folA 1.5.1.3 H dihydrofolate reductase
GIFHNECI_00120 1.6e-173 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GIFHNECI_00121 5e-72 attW O OsmC-like protein
GIFHNECI_00122 7.8e-191 T Universal stress protein family
GIFHNECI_00123 3.4e-101 M NlpC/P60 family
GIFHNECI_00124 2.4e-176 usp 3.5.1.28 CBM50 S CHAP domain
GIFHNECI_00125 2.5e-214 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
GIFHNECI_00126 2.6e-39
GIFHNECI_00127 1.3e-216 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GIFHNECI_00128 1.7e-117 phoU P Plays a role in the regulation of phosphate uptake
GIFHNECI_00129 2e-09 EGP Major facilitator Superfamily
GIFHNECI_00130 8.7e-153 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GIFHNECI_00131 4.3e-175 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
GIFHNECI_00132 0.0 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
GIFHNECI_00134 1.6e-216 araJ EGP Major facilitator Superfamily
GIFHNECI_00135 0.0 S Domain of unknown function (DUF4037)
GIFHNECI_00136 4e-110 S Protein of unknown function (DUF4125)
GIFHNECI_00137 1.5e-127
GIFHNECI_00138 2.4e-285 pspC KT PspC domain
GIFHNECI_00139 2.7e-266 tcsS3 KT PspC domain
GIFHNECI_00140 9.2e-126 degU K helix_turn_helix, Lux Regulon
GIFHNECI_00141 2e-277 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GIFHNECI_00142 2.3e-142 pgl 3.1.1.31 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
GIFHNECI_00143 9.4e-186 opcA G Glucose-6-phosphate dehydrogenase subunit
GIFHNECI_00144 0.0 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GIFHNECI_00145 7.6e-94
GIFHNECI_00147 0.0 nagLU 3.1.4.53, 3.2.1.21, 3.2.1.50 GH3 G Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain
GIFHNECI_00149 4e-229 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GIFHNECI_00150 0.0 nucH 3.1.3.5 F 5'-nucleotidase, C-terminal domain
GIFHNECI_00151 6.7e-212 I Diacylglycerol kinase catalytic domain
GIFHNECI_00152 1.9e-150 arbG K CAT RNA binding domain
GIFHNECI_00153 0.0 crr G pts system, glucose-specific IIABC component
GIFHNECI_00154 4.5e-27 M Spy0128-like isopeptide containing domain
GIFHNECI_00155 6.1e-43 M Spy0128-like isopeptide containing domain
GIFHNECI_00157 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
GIFHNECI_00158 1.4e-259 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GIFHNECI_00159 0.0 nagH 3.2.1.35, 3.2.1.52 GH20 G beta-N-acetylglucosaminidase
GIFHNECI_00160 2.1e-202 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GIFHNECI_00161 5.4e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GIFHNECI_00163 3.6e-106
GIFHNECI_00164 4.2e-49 L Transposase and inactivated derivatives IS30 family
GIFHNECI_00165 3.9e-254 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GIFHNECI_00166 2.5e-231 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
GIFHNECI_00167 1.7e-235 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GIFHNECI_00168 4.7e-84 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GIFHNECI_00169 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GIFHNECI_00170 2.8e-188 nusA K Participates in both transcription termination and antitermination
GIFHNECI_00171 2.8e-158
GIFHNECI_00172 6.6e-39 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
GIFHNECI_00174 1.3e-153 E Transglutaminase/protease-like homologues
GIFHNECI_00175 0.0 gcs2 S A circularly permuted ATPgrasp
GIFHNECI_00176 6.4e-173 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
GIFHNECI_00177 0.0 3.2.1.52 GH20 G hydrolase family 20, catalytic
GIFHNECI_00178 2.1e-64 rplQ J Ribosomal protein L17
GIFHNECI_00179 8.9e-184 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GIFHNECI_00180 1.1e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GIFHNECI_00181 3.3e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GIFHNECI_00182 6.5e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
GIFHNECI_00183 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GIFHNECI_00184 3.8e-99 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
GIFHNECI_00185 4.7e-249 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
GIFHNECI_00186 2.7e-63 rplO J binds to the 23S rRNA
GIFHNECI_00187 1e-24 rpmD J Ribosomal protein L30p/L7e
GIFHNECI_00188 1.5e-100 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GIFHNECI_00189 1.1e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GIFHNECI_00190 2.1e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GIFHNECI_00191 4.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GIFHNECI_00192 9.2e-18 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GIFHNECI_00193 2.2e-102 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GIFHNECI_00194 3.5e-52 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GIFHNECI_00195 6.6e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GIFHNECI_00196 3.5e-42 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GIFHNECI_00197 5e-38 rpmC J Belongs to the universal ribosomal protein uL29 family
GIFHNECI_00198 5.8e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GIFHNECI_00199 7.5e-96 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GIFHNECI_00200 4.3e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GIFHNECI_00201 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GIFHNECI_00202 4.2e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GIFHNECI_00203 2.6e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
GIFHNECI_00204 3.9e-119 rplD J Forms part of the polypeptide exit tunnel
GIFHNECI_00205 4.2e-118 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GIFHNECI_00206 5.2e-50 rpsJ J Involved in the binding of tRNA to the ribosomes
GIFHNECI_00207 1.9e-19 ywiC S YwiC-like protein
GIFHNECI_00208 4e-31 ywiC S YwiC-like protein
GIFHNECI_00209 8.7e-167 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
GIFHNECI_00210 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
GIFHNECI_00211 2.8e-232 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
GIFHNECI_00212 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
GIFHNECI_00213 8.8e-68 rpsI J Belongs to the universal ribosomal protein uS9 family
GIFHNECI_00214 3.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GIFHNECI_00215 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
GIFHNECI_00216 1.4e-117
GIFHNECI_00217 1.8e-113 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
GIFHNECI_00218 3.6e-257 M Bacterial capsule synthesis protein PGA_cap
GIFHNECI_00220 3.4e-236 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GIFHNECI_00221 3.6e-224 dapC E Aminotransferase class I and II
GIFHNECI_00222 9e-61 fdxA C 4Fe-4S binding domain
GIFHNECI_00223 6.9e-215 murB 1.3.1.98 M Cell wall formation
GIFHNECI_00224 1.9e-25 rpmG J Ribosomal protein L33
GIFHNECI_00228 1.2e-51 moxR S ATPase family associated with various cellular activities (AAA)
GIFHNECI_00229 5.3e-128 bla1 3.5.2.6 V Beta-lactamase enzyme family
GIFHNECI_00230 1.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GIFHNECI_00231 2.1e-127
GIFHNECI_00232 2.3e-92 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
GIFHNECI_00233 5.4e-121 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
GIFHNECI_00234 3.2e-38 fmdB S Putative regulatory protein
GIFHNECI_00235 3.6e-109 flgA NO SAF
GIFHNECI_00236 2.8e-41
GIFHNECI_00237 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
GIFHNECI_00238 7.2e-239 T Forkhead associated domain
GIFHNECI_00240 1.3e-37 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
GIFHNECI_00241 2.1e-88 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GIFHNECI_00242 2.6e-183 xynB2 1.1.1.169 E lipolytic protein G-D-S-L family
GIFHNECI_00243 0.0 guxA1 3.2.1.18, 3.2.1.91 GH33,GH6 G BNR repeat-like domain
GIFHNECI_00244 8.8e-222 pbuO S Permease family
GIFHNECI_00245 5.4e-12 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
GIFHNECI_00246 2.4e-170 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
GIFHNECI_00247 3.6e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GIFHNECI_00248 6.2e-180 pstA P Phosphate transport system permease
GIFHNECI_00249 3.8e-171 pstC P probably responsible for the translocation of the substrate across the membrane
GIFHNECI_00250 6.8e-172 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
GIFHNECI_00251 3.4e-129 KT Transcriptional regulatory protein, C terminal
GIFHNECI_00252 5.1e-243 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
GIFHNECI_00253 1.9e-124 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GIFHNECI_00254 1.7e-240 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GIFHNECI_00255 9.7e-109 K helix_turn_helix, Arsenical Resistance Operon Repressor
GIFHNECI_00256 4.4e-242 EGP Major facilitator Superfamily
GIFHNECI_00257 4.8e-218 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GIFHNECI_00258 1.5e-165 L Excalibur calcium-binding domain
GIFHNECI_00259 7.1e-269 pepC 3.4.22.40 E Peptidase C1-like family
GIFHNECI_00260 3.7e-53 D nuclear chromosome segregation
GIFHNECI_00261 1.5e-126 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GIFHNECI_00262 1.1e-144 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
GIFHNECI_00263 1.1e-186 yfiH Q Multi-copper polyphenol oxidoreductase laccase
GIFHNECI_00264 0.0 yegQ O Peptidase family U32 C-terminal domain
GIFHNECI_00265 6.7e-159 L Transposase and inactivated derivatives IS30 family
GIFHNECI_00266 4.6e-168 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
GIFHNECI_00267 2.2e-41 nrdH O Glutaredoxin
GIFHNECI_00268 1.1e-98 nrdI F Probably involved in ribonucleotide reductase function
GIFHNECI_00269 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GIFHNECI_00270 6.1e-189 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GIFHNECI_00271 3.5e-74 megL 2.5.1.48, 4.4.1.1, 4.4.1.11, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
GIFHNECI_00272 0.0 S Predicted membrane protein (DUF2207)
GIFHNECI_00273 1.5e-87 lemA S LemA family
GIFHNECI_00274 2.8e-115 xylR K purine nucleotide biosynthetic process
GIFHNECI_00275 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
GIFHNECI_00276 3e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GIFHNECI_00277 1.2e-118
GIFHNECI_00278 0.0 nagH 3.2.1.35, 3.2.1.52 GH20 G beta-N-acetylglucosaminidase
GIFHNECI_00280 4.2e-161 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
GIFHNECI_00281 5.9e-100 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
GIFHNECI_00282 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
GIFHNECI_00283 1.6e-307 pccB I Carboxyl transferase domain
GIFHNECI_00284 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
GIFHNECI_00285 2.4e-63 bioY S BioY family
GIFHNECI_00286 1.9e-11 bioY S BioY family
GIFHNECI_00287 4.4e-152 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
GIFHNECI_00288 0.0
GIFHNECI_00289 5.9e-146 QT PucR C-terminal helix-turn-helix domain
GIFHNECI_00290 2.3e-130 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
GIFHNECI_00291 8.7e-50 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
GIFHNECI_00292 1.5e-283 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GIFHNECI_00293 6e-166 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GIFHNECI_00294 0.0 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GIFHNECI_00295 2.4e-150 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GIFHNECI_00296 1.1e-60 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GIFHNECI_00297 1e-30 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GIFHNECI_00298 6e-146 atpB C it plays a direct role in the translocation of protons across the membrane
GIFHNECI_00299 2e-207 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
GIFHNECI_00301 4.6e-35
GIFHNECI_00302 0.0 K RNA polymerase II activating transcription factor binding
GIFHNECI_00303 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
GIFHNECI_00304 5.2e-92 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
GIFHNECI_00306 2.7e-100 mntP P Probably functions as a manganese efflux pump
GIFHNECI_00308 1.4e-125
GIFHNECI_00309 1.8e-133 KT Transcriptional regulatory protein, C terminal
GIFHNECI_00310 1.5e-120 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GIFHNECI_00311 4.3e-294 E Bacterial extracellular solute-binding proteins, family 5 Middle
GIFHNECI_00312 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
GIFHNECI_00313 1.3e-44 insK L Integrase core domain
GIFHNECI_00314 0.0 S domain protein
GIFHNECI_00315 4.7e-73 tyrA 5.4.99.5 E Chorismate mutase type II
GIFHNECI_00316 1.5e-89 lrp_3 K helix_turn_helix ASNC type
GIFHNECI_00317 8.8e-234 E Aminotransferase class I and II
GIFHNECI_00318 4.7e-304 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
GIFHNECI_00319 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
GIFHNECI_00320 2.5e-52 S Protein of unknown function (DUF2469)
GIFHNECI_00321 1.7e-198 2.3.1.57 J Acetyltransferase (GNAT) domain
GIFHNECI_00322 1.4e-286 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GIFHNECI_00323 1.1e-289 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
GIFHNECI_00324 6.2e-48 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GIFHNECI_00325 4.8e-15 V ABC transporter
GIFHNECI_00326 7.3e-62 V ABC transporter
GIFHNECI_00327 1e-60 V ABC transporter
GIFHNECI_00328 6.9e-156 spoU 2.1.1.185 J RNA methyltransferase TrmH family
GIFHNECI_00329 7.7e-129 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GIFHNECI_00330 3.4e-199 rmuC S RmuC family
GIFHNECI_00331 9.6e-43 csoR S Metal-sensitive transcriptional repressor
GIFHNECI_00332 0.0 pacS 3.6.3.54 P E1-E2 ATPase
GIFHNECI_00333 0.0 ubiB S ABC1 family
GIFHNECI_00334 3.5e-19 S granule-associated protein
GIFHNECI_00335 7.5e-143 cobQ S CobB/CobQ-like glutamine amidotransferase domain
GIFHNECI_00336 7.7e-275 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
GIFHNECI_00337 7.5e-258 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
GIFHNECI_00338 7e-251 dinF V MatE
GIFHNECI_00339 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
GIFHNECI_00340 1e-54 glnB K Nitrogen regulatory protein P-II
GIFHNECI_00341 3.4e-220 amt U Ammonium Transporter Family
GIFHNECI_00342 8.1e-203 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
GIFHNECI_00344 1.2e-116 icaR K Bacterial regulatory proteins, tetR family
GIFHNECI_00345 1.5e-197 XK27_01805 M Glycosyltransferase like family 2
GIFHNECI_00346 0.0 S Glycosyl hydrolases related to GH101 family, GH129
GIFHNECI_00347 8.4e-306 pepD E Peptidase family C69
GIFHNECI_00349 2.9e-19 XK26_04485 P Cobalt transport protein
GIFHNECI_00350 9.6e-68 XK26_04485 P Cobalt transport protein
GIFHNECI_00351 1.3e-81
GIFHNECI_00352 0.0 V ABC transporter transmembrane region
GIFHNECI_00353 1.8e-301 V ABC transporter, ATP-binding protein
GIFHNECI_00354 1e-81 K Winged helix DNA-binding domain
GIFHNECI_00355 2e-14
GIFHNECI_00356 4e-290 M LPXTG cell wall anchor motif
GIFHNECI_00357 0.0 M chlorophyll binding
GIFHNECI_00358 9.7e-195 3.4.22.70 M Sortase family
GIFHNECI_00360 9.2e-09 S Sucrose-6F-phosphate phosphohydrolase
GIFHNECI_00361 2.2e-159 S Sucrose-6F-phosphate phosphohydrolase
GIFHNECI_00362 2.7e-241 S Putative ABC-transporter type IV
GIFHNECI_00363 1.2e-80
GIFHNECI_00364 3e-33 Q phosphatase activity
GIFHNECI_00365 1.4e-294 bglA 3.2.1.86 GT1 G Glycosyl hydrolase family 1
GIFHNECI_00366 7.5e-39 celC 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
GIFHNECI_00367 1.2e-48 celA 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
GIFHNECI_00368 2.1e-249 gmuC G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GIFHNECI_00369 3.2e-68 S haloacid dehalogenase-like hydrolase
GIFHNECI_00370 3.6e-131 yydK K UTRA
GIFHNECI_00371 1.3e-70 S FMN_bind
GIFHNECI_00372 7.5e-149 macB V ABC transporter, ATP-binding protein
GIFHNECI_00373 1.1e-205 Z012_06715 V FtsX-like permease family
GIFHNECI_00374 9.7e-223 macB_2 V ABC transporter permease
GIFHNECI_00375 1.4e-234 S Predicted membrane protein (DUF2318)
GIFHNECI_00376 6.4e-109 tpd P Fe2+ transport protein
GIFHNECI_00377 4.6e-308 efeU_1 P Iron permease FTR1 family
GIFHNECI_00378 5.9e-22 G MFS/sugar transport protein
GIFHNECI_00379 1.4e-200 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GIFHNECI_00380 2e-125 S Fic/DOC family
GIFHNECI_00381 3.6e-291 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GIFHNECI_00382 5e-38 ptsH G PTS HPr component phosphorylation site
GIFHNECI_00383 2.8e-186 K helix_turn _helix lactose operon repressor
GIFHNECI_00384 1.3e-210 holB 2.7.7.7 L DNA polymerase III
GIFHNECI_00385 2.1e-118 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GIFHNECI_00386 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GIFHNECI_00387 3e-188 3.6.1.27 I PAP2 superfamily
GIFHNECI_00388 0.0 vpr M PA domain
GIFHNECI_00389 1.4e-122 yplQ S Haemolysin-III related
GIFHNECI_00390 4.6e-232 glf 5.4.99.9 M UDP-galactopyranose mutase
GIFHNECI_00391 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
GIFHNECI_00392 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GIFHNECI_00393 9.3e-280 S Calcineurin-like phosphoesterase
GIFHNECI_00394 3e-15 pbpB 2.7.11.1, 3.4.16.4 S PASTA domain
GIFHNECI_00395 2.6e-272 pbpB 2.7.11.1, 3.4.16.4 S PASTA domain
GIFHNECI_00396 1.7e-116
GIFHNECI_00397 8.5e-212 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GIFHNECI_00398 1.8e-96 askB 1.1.1.3, 2.7.2.4 E ACT domain
GIFHNECI_00399 5.3e-136 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
GIFHNECI_00400 6.7e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GIFHNECI_00401 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
GIFHNECI_00402 3.7e-215 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
GIFHNECI_00403 3.1e-57 S TIGRFAM helicase secretion neighborhood TadE-like protein
GIFHNECI_00404 3.2e-41 S Protein of unknown function (DUF4244)
GIFHNECI_00405 1.3e-80 gspF NU Type II secretion system (T2SS), protein F
GIFHNECI_00406 1.7e-120 U Type ii secretion system
GIFHNECI_00407 3.4e-191 cpaF U Type II IV secretion system protein
GIFHNECI_00408 2.6e-152 cpaE D bacterial-type flagellum organization
GIFHNECI_00410 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
GIFHNECI_00411 6.3e-201 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
GIFHNECI_00412 2.3e-91
GIFHNECI_00413 4.9e-45 cbiM P PDGLE domain
GIFHNECI_00414 2.8e-28 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
GIFHNECI_00415 1.8e-209 S Glycosyltransferase, group 2 family protein
GIFHNECI_00416 1.7e-276
GIFHNECI_00417 1.6e-26 thiS 2.8.1.10 H ThiS family
GIFHNECI_00418 9.2e-164 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
GIFHNECI_00419 0.0 S Psort location Cytoplasmic, score 8.87
GIFHNECI_00420 6.9e-150 gtrB GT2 M Glycosyl transferase family 2
GIFHNECI_00421 0.0 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
GIFHNECI_00422 1.1e-246 V ABC transporter permease
GIFHNECI_00423 3.2e-173 V ABC transporter
GIFHNECI_00424 1.8e-136 T HD domain
GIFHNECI_00425 3e-164 S Glutamine amidotransferase domain
GIFHNECI_00427 0.0 kup P Transport of potassium into the cell
GIFHNECI_00428 5.9e-185 tatD L TatD related DNase
GIFHNECI_00429 8.2e-210 xylR 5.3.1.12 G MFS/sugar transport protein
GIFHNECI_00430 2.6e-41 xylR 5.3.1.12 G MFS/sugar transport protein
GIFHNECI_00432 1.1e-84 K Transcriptional regulator
GIFHNECI_00433 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GIFHNECI_00434 3.6e-130
GIFHNECI_00435 8.6e-59
GIFHNECI_00436 2.9e-166 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GIFHNECI_00437 1.3e-125 dedA S SNARE associated Golgi protein
GIFHNECI_00439 3.5e-134 S HAD hydrolase, family IA, variant 3
GIFHNECI_00440 0.0 3.2.1.18, 3.2.1.51 GH29,GH33 G BNR Asp-box repeat
GIFHNECI_00441 3.8e-47 insK L Integrase core domain
GIFHNECI_00442 0.0 3.2.1.18, 3.2.1.51 GH29,GH33 G BNR repeat-like domain
GIFHNECI_00443 5.2e-87 hspR K transcriptional regulator, MerR family
GIFHNECI_00444 2.4e-173 dnaJ1 O DnaJ molecular chaperone homology domain
GIFHNECI_00445 1.4e-58 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GIFHNECI_00446 0.0 dnaK O Heat shock 70 kDa protein
GIFHNECI_00447 0.0 phoA 3.1.3.1, 3.1.3.39 P Alkaline phosphatase homologues
GIFHNECI_00448 1e-190 K Psort location Cytoplasmic, score
GIFHNECI_00449 1.2e-131 G Phosphoglycerate mutase family
GIFHNECI_00450 1.6e-69 S Protein of unknown function (DUF4235)
GIFHNECI_00451 1.6e-140 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
GIFHNECI_00452 1.1e-45
GIFHNECI_00453 1e-144 cobB2 K Sir2 family
GIFHNECI_00454 2.2e-234 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
GIFHNECI_00455 1.1e-83 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
GIFHNECI_00456 1.4e-144 ypfH S Phospholipase/Carboxylesterase
GIFHNECI_00457 0.0 yjcE P Sodium/hydrogen exchanger family
GIFHNECI_00458 5.3e-112 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
GIFHNECI_00459 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
GIFHNECI_00460 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
GIFHNECI_00462 9.9e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GIFHNECI_00463 1e-270 KLT Domain of unknown function (DUF4032)
GIFHNECI_00464 9.8e-155
GIFHNECI_00465 6.9e-181 3.4.22.70 M Sortase family
GIFHNECI_00466 7.9e-243 M LPXTG-motif cell wall anchor domain protein
GIFHNECI_00467 0.0 S LPXTG-motif cell wall anchor domain protein
GIFHNECI_00468 6.6e-104 L Helix-turn-helix domain
GIFHNECI_00469 4.3e-211 ugpC E Belongs to the ABC transporter superfamily
GIFHNECI_00470 6.9e-175 K Psort location Cytoplasmic, score
GIFHNECI_00471 0.0 KLT Protein tyrosine kinase
GIFHNECI_00472 8.4e-151 O Thioredoxin
GIFHNECI_00474 5.4e-212 S G5
GIFHNECI_00475 6.3e-171 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
GIFHNECI_00476 9.3e-168 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
GIFHNECI_00477 6.7e-113 S LytR cell envelope-related transcriptional attenuator
GIFHNECI_00478 6.8e-278 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
GIFHNECI_00479 5.2e-124 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
GIFHNECI_00480 0.0 M Conserved repeat domain
GIFHNECI_00481 0.0 murJ KLT MviN-like protein
GIFHNECI_00482 2.6e-203 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
GIFHNECI_00483 1.8e-243 parB K Belongs to the ParB family
GIFHNECI_00484 8.5e-179 parA D CobQ CobB MinD ParA nucleotide binding domain protein
GIFHNECI_00485 6.5e-125 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
GIFHNECI_00486 8.6e-93 jag S Putative single-stranded nucleic acids-binding domain
GIFHNECI_00487 1e-171 yidC U Membrane protein insertase, YidC Oxa1 family
GIFHNECI_00488 4.5e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
GIFHNECI_00489 2e-299 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GIFHNECI_00490 6e-205 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
GIFHNECI_00491 8e-241 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GIFHNECI_00492 2e-87 S Protein of unknown function (DUF721)
GIFHNECI_00493 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GIFHNECI_00494 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GIFHNECI_00495 1e-72 S Transmembrane domain of unknown function (DUF3566)
GIFHNECI_00496 2.8e-20 abfA1 3.2.1.55 GH51 G arabinose metabolic process
GIFHNECI_00497 3.5e-187 G Glycosyl hydrolases family 43
GIFHNECI_00498 2.7e-187 K Periplasmic binding protein domain
GIFHNECI_00499 3e-228 I Serine aminopeptidase, S33
GIFHNECI_00500 1.3e-07 K helix_turn _helix lactose operon repressor
GIFHNECI_00503 1.5e-258 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
GIFHNECI_00504 1.4e-122 gntR K FCD
GIFHNECI_00505 2.5e-50 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GIFHNECI_00506 0.0 3.2.1.55 GH51 G arabinose metabolic process
GIFHNECI_00509 0.0 G Glycosyl hydrolase family 20, domain 2
GIFHNECI_00510 2.3e-190 K helix_turn _helix lactose operon repressor
GIFHNECI_00511 8.6e-78 ulaC 2.7.1.194, 2.7.1.197, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GIFHNECI_00512 3.3e-40 ulaC 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
GIFHNECI_00513 3.6e-261 ulaA 2.7.1.194 S PTS system sugar-specific permease component
GIFHNECI_00514 3.3e-135 S Protein of unknown function DUF45
GIFHNECI_00515 1.9e-83 dps P Belongs to the Dps family
GIFHNECI_00516 2.2e-188 yddG EG EamA-like transporter family
GIFHNECI_00517 1.2e-241 ytfL P Transporter associated domain
GIFHNECI_00518 1.8e-78 K helix_turn _helix lactose operon repressor
GIFHNECI_00519 6.9e-119 cah 4.2.1.1 P Reversible hydration of carbon dioxide
GIFHNECI_00520 2.9e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
GIFHNECI_00521 0.0 trxB1 1.8.1.9 C Thioredoxin domain
GIFHNECI_00522 4.3e-239 yhjX EGP Major facilitator Superfamily
GIFHNECI_00523 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
GIFHNECI_00524 0.0 yjjP S Threonine/Serine exporter, ThrE
GIFHNECI_00525 5.2e-177 S Amidohydrolase family
GIFHNECI_00526 1.5e-194 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
GIFHNECI_00527 6.5e-204 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
GIFHNECI_00528 1e-47 S Protein of unknown function (DUF3073)
GIFHNECI_00529 1.1e-101 T protein histidine kinase activity
GIFHNECI_00530 3e-62 L Transposase and inactivated derivatives IS30 family
GIFHNECI_00531 3e-203 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
GIFHNECI_00532 8.7e-28 I transferase activity, transferring acyl groups other than amino-acyl groups
GIFHNECI_00533 0.0 lytC 2.1.1.197, 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
GIFHNECI_00534 4.4e-172 rfbJ M Glycosyl transferase family 2
GIFHNECI_00535 2.1e-16 L PFAM Integrase catalytic
GIFHNECI_00536 4.1e-144 L IstB-like ATP binding protein
GIFHNECI_00537 9.9e-172 L Transposase
GIFHNECI_00538 1.3e-208 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
GIFHNECI_00539 1.6e-124 rgpC U Transport permease protein
GIFHNECI_00540 1.2e-168 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
GIFHNECI_00541 3.1e-102 L Transposase, Mutator family
GIFHNECI_00542 1e-105 L PFAM Integrase catalytic
GIFHNECI_00543 1.3e-75 L IstB-like ATP binding protein
GIFHNECI_00544 1.1e-178 L HTH-like domain
GIFHNECI_00545 1.7e-16 L Transposase
GIFHNECI_00546 4.6e-41 L Transposase DDE domain
GIFHNECI_00547 2.3e-289 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
GIFHNECI_00548 3e-220 3.6.4.12 K Putative DNA-binding domain
GIFHNECI_00549 4.2e-23 L Transposase and inactivated derivatives IS30 family
GIFHNECI_00550 1.5e-45 L IstB-like ATP binding protein
GIFHNECI_00551 0.0
GIFHNECI_00552 2.5e-202 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
GIFHNECI_00553 1.1e-26 2.1.1.72 S Adenine-specific methyltransferase EcoRI
GIFHNECI_00554 8.1e-171 tnp7109-21 L Integrase core domain
GIFHNECI_00555 4.7e-46 L Transposase
GIFHNECI_00556 1.3e-63 D MobA/MobL family
GIFHNECI_00557 3e-71
GIFHNECI_00559 6.3e-40 L Transposase and inactivated derivatives IS30 family
GIFHNECI_00560 3.5e-137 L Transposase and inactivated derivatives IS30 family
GIFHNECI_00561 8.8e-259 S Domain of unknown function (DUF4143)
GIFHNECI_00562 1.4e-57 yccF S Inner membrane component domain
GIFHNECI_00563 3.5e-12
GIFHNECI_00564 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
GIFHNECI_00565 3.9e-43 tnp7109-21 L Integrase core domain
GIFHNECI_00566 2.5e-52 L IstB-like ATP binding protein
GIFHNECI_00567 8.7e-46 L Transposase
GIFHNECI_00568 2e-73 I Sterol carrier protein
GIFHNECI_00569 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
GIFHNECI_00570 2.2e-27 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
GIFHNECI_00572 3.4e-35
GIFHNECI_00573 6.4e-145 gluP 3.4.21.105 S Rhomboid family
GIFHNECI_00574 6.8e-26 L HTH-like domain
GIFHNECI_00575 1.4e-256 L ribosomal rna small subunit methyltransferase
GIFHNECI_00576 6.9e-67 crgA D Involved in cell division
GIFHNECI_00577 3.5e-143 S Bacterial protein of unknown function (DUF881)
GIFHNECI_00578 2.6e-233 srtA 3.4.22.70 M Sortase family
GIFHNECI_00579 3.4e-120 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
GIFHNECI_00580 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
GIFHNECI_00581 2e-183 T Protein tyrosine kinase
GIFHNECI_00582 1.3e-263 pbpA M penicillin-binding protein
GIFHNECI_00583 2.8e-266 rodA D Belongs to the SEDS family
GIFHNECI_00584 4.3e-257 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
GIFHNECI_00585 7.9e-94 fhaB T Inner membrane component of T3SS, cytoplasmic domain
GIFHNECI_00586 1e-130 fhaA T Protein of unknown function (DUF2662)
GIFHNECI_00587 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
GIFHNECI_00588 0.0 pip S YhgE Pip domain protein
GIFHNECI_00589 0.0 pip S YhgE Pip domain protein
GIFHNECI_00590 4.6e-207 pldB 3.1.1.5 I Serine aminopeptidase, S33
GIFHNECI_00591 2.5e-162 yicL EG EamA-like transporter family
GIFHNECI_00592 6.9e-104
GIFHNECI_00594 3.5e-196 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GIFHNECI_00596 0.0 KL Domain of unknown function (DUF3427)
GIFHNECI_00597 7.8e-91 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
GIFHNECI_00598 1.6e-35 D DivIVA domain protein
GIFHNECI_00599 2.7e-52 ybjQ S Putative heavy-metal-binding
GIFHNECI_00600 1.3e-156 I Serine aminopeptidase, S33
GIFHNECI_00601 4.1e-86 yjcF Q Acetyltransferase (GNAT) domain
GIFHNECI_00603 2.7e-257 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
GIFHNECI_00604 2.1e-242 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
GIFHNECI_00605 0.0 cadA P E1-E2 ATPase
GIFHNECI_00606 5e-273 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
GIFHNECI_00607 5.8e-169 htpX O Belongs to the peptidase M48B family
GIFHNECI_00609 0.0 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
GIFHNECI_00611 9.3e-42 S Bacterial mobilisation protein (MobC)
GIFHNECI_00612 2.3e-127 S Domain of unknown function (DUF4417)
GIFHNECI_00614 3.4e-76
GIFHNECI_00615 3.9e-50 E IrrE N-terminal-like domain
GIFHNECI_00616 2e-12 E IrrE N-terminal-like domain
GIFHNECI_00617 4.9e-57 K Cro/C1-type HTH DNA-binding domain
GIFHNECI_00618 6.6e-248 3.5.1.104 G Polysaccharide deacetylase
GIFHNECI_00619 3.3e-200 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
GIFHNECI_00620 1.9e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GIFHNECI_00621 1.5e-164 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GIFHNECI_00622 1.1e-59 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GIFHNECI_00623 2e-194 K helix_turn _helix lactose operon repressor
GIFHNECI_00624 5.9e-76 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
GIFHNECI_00625 2.4e-298 scrT G Transporter major facilitator family protein
GIFHNECI_00626 2.5e-253 yhjE EGP Sugar (and other) transporter
GIFHNECI_00627 2.8e-204 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
GIFHNECI_00628 9e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
GIFHNECI_00629 8.8e-184 gmk 1.1.1.23, 2.7.4.8 S Protein of unknown function (DUF559)
GIFHNECI_00630 0.0 lacZ 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GIFHNECI_00631 9.6e-275 aroP E aromatic amino acid transport protein AroP K03293
GIFHNECI_00632 7e-101 K Transcriptional regulator C-terminal region
GIFHNECI_00633 2.6e-129 V ABC transporter
GIFHNECI_00634 0.0 V FtsX-like permease family
GIFHNECI_00635 2.5e-83 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GIFHNECI_00636 3e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GIFHNECI_00637 1.2e-39 E ABC transporter
GIFHNECI_00638 7.6e-100 bcp 1.11.1.15 O Redoxin
GIFHNECI_00639 1.8e-149 S Virulence factor BrkB
GIFHNECI_00640 2.1e-41 XAC3035 O Glutaredoxin
GIFHNECI_00641 5.7e-84 L Transposase
GIFHNECI_00642 4.3e-23 L Transposase
GIFHNECI_00643 5.5e-187 L Transposase, Mutator family
GIFHNECI_00644 0.0 yvnB 3.1.4.53 S Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
GIFHNECI_00645 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GIFHNECI_00646 2.3e-71 L HNH endonuclease
GIFHNECI_00647 2.9e-243 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
GIFHNECI_00648 8.5e-266 EGP Major Facilitator Superfamily
GIFHNECI_00649 1.3e-40 2.3.1.39 IQ [acyl-carrier-protein] S-malonyltransferase activity
GIFHNECI_00650 5.2e-119 L Integrase core domain
GIFHNECI_00651 1.8e-36 L Psort location Cytoplasmic, score 8.87
GIFHNECI_00652 5e-116 K WHG domain
GIFHNECI_00653 1.9e-110 pptA 6.3.2.14 Q 4'-phosphopantetheinyl transferase superfamily
GIFHNECI_00654 1.2e-151 L HNH endonuclease
GIFHNECI_00655 1.2e-44 L Transposase
GIFHNECI_00656 1.2e-169 tnp7109-21 L Integrase core domain
GIFHNECI_00657 4.5e-174 S Domain of unknown function (DUF4928)
GIFHNECI_00658 6.7e-231 dcm 2.1.1.37 L Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
GIFHNECI_00659 5.7e-157 S FRG domain
GIFHNECI_00660 4.3e-12 S FRG domain
GIFHNECI_00661 2.5e-214 T AAA domain
GIFHNECI_00662 1.2e-86 T AAA domain
GIFHNECI_00663 8.2e-53
GIFHNECI_00665 7.9e-17 M Belongs to the glycosyl hydrolase 30 family
GIFHNECI_00666 8.1e-98 M Belongs to the glycosyl hydrolase 30 family
GIFHNECI_00667 6.3e-190 1.1.1.65 C Aldo/keto reductase family
GIFHNECI_00668 2.9e-93 ydgJ K helix_turn_helix multiple antibiotic resistance protein
GIFHNECI_00669 0.0 lmrA1 V ABC transporter, ATP-binding protein
GIFHNECI_00670 0.0 lmrA2 V ABC transporter transmembrane region
GIFHNECI_00672 0.0 3.2.1.51 GH95 G Glycosyl hydrolase family 65, N-terminal domain
GIFHNECI_00673 1.3e-107 S Phosphatidylethanolamine-binding protein
GIFHNECI_00674 0.0 pepD E Peptidase family C69
GIFHNECI_00675 4e-287 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
GIFHNECI_00676 1.3e-62 S Macrophage migration inhibitory factor (MIF)
GIFHNECI_00677 4.4e-97 S GtrA-like protein
GIFHNECI_00678 6.2e-263 EGP Major facilitator Superfamily
GIFHNECI_00679 2.8e-125 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
GIFHNECI_00680 2.2e-144
GIFHNECI_00681 3.8e-137 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
GIFHNECI_00682 2.1e-199 P NMT1/THI5 like
GIFHNECI_00683 4.9e-122 S HAD hydrolase, family IA, variant 3
GIFHNECI_00685 4.1e-297 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GIFHNECI_00686 2.6e-94 S Domain of unknown function (DUF4143)
GIFHNECI_00687 9.5e-65 S Domain of unknown function (DUF4143)
GIFHNECI_00690 9.2e-250 S Calcineurin-like phosphoesterase
GIFHNECI_00691 2.8e-138 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
GIFHNECI_00692 2.2e-273 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
GIFHNECI_00693 3.8e-133 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
GIFHNECI_00694 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
GIFHNECI_00696 7.8e-137 S CAAX protease self-immunity
GIFHNECI_00697 1e-220 pyrD 1.3.1.14 F Dihydroorotate dehydrogenase
GIFHNECI_00698 9.8e-255 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GIFHNECI_00699 3.7e-225 G Transmembrane secretion effector
GIFHNECI_00700 7.3e-132 K Bacterial regulatory proteins, tetR family
GIFHNECI_00701 5.3e-130
GIFHNECI_00702 2.3e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GIFHNECI_00703 6.1e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
GIFHNECI_00704 1.8e-165 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
GIFHNECI_00705 1.9e-187
GIFHNECI_00706 5.1e-179
GIFHNECI_00707 3.8e-163 trxA2 O Tetratricopeptide repeat
GIFHNECI_00708 1.5e-117 cyaA 4.6.1.1 S CYTH
GIFHNECI_00710 1.4e-184 K Bacterial regulatory proteins, lacI family
GIFHNECI_00711 4.7e-19 4.2.1.68 M Enolase C-terminal domain-like
GIFHNECI_00712 6.8e-29 4.2.1.68 M Enolase C-terminal domain-like
GIFHNECI_00713 1.1e-109 IQ KR domain
GIFHNECI_00714 8.8e-187 G Bacterial extracellular solute-binding protein
GIFHNECI_00715 6.5e-120 U Binding-protein-dependent transport system inner membrane component
GIFHNECI_00716 1.3e-125 G Binding-protein-dependent transport systems inner membrane component
GIFHNECI_00718 2.8e-183 fucA 3.2.1.51 GH29 G Alpha-L-fucosidase
GIFHNECI_00720 0.0 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
GIFHNECI_00721 5.2e-63 psp1 3.5.99.10 J Endoribonuclease L-PSP
GIFHNECI_00722 1.5e-180 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
GIFHNECI_00723 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
GIFHNECI_00724 6.3e-304 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
GIFHNECI_00725 1.9e-81 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GIFHNECI_00726 2.9e-290 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
GIFHNECI_00727 2.3e-240 hom 1.1.1.3 E Homoserine dehydrogenase
GIFHNECI_00728 1.6e-188 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
GIFHNECI_00729 1.8e-278 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
GIFHNECI_00730 4.6e-64
GIFHNECI_00731 6.1e-58
GIFHNECI_00732 2.4e-164 V ATPases associated with a variety of cellular activities
GIFHNECI_00733 3.3e-256 V Efflux ABC transporter, permease protein
GIFHNECI_00734 2.2e-168 mdcF S Transporter, auxin efflux carrier (AEC) family protein
GIFHNECI_00735 5.8e-241 dapE 3.5.1.18 E Peptidase dimerisation domain
GIFHNECI_00737 0.0 rne 3.1.26.12 J Ribonuclease E/G family
GIFHNECI_00738 3.2e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
GIFHNECI_00739 3.1e-40 rpmA J Ribosomal L27 protein
GIFHNECI_00740 3.7e-215 K Psort location Cytoplasmic, score
GIFHNECI_00741 4.8e-299 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GIFHNECI_00742 4.1e-201 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
GIFHNECI_00743 5.8e-230 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
GIFHNECI_00745 4.7e-32 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
GIFHNECI_00746 2.6e-99 nusG K Participates in transcription elongation, termination and antitermination
GIFHNECI_00747 2.8e-173 plsC2 2.3.1.51 I Phosphate acyltransferases
GIFHNECI_00748 6.2e-177 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
GIFHNECI_00749 5.7e-219 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
GIFHNECI_00750 3.7e-201 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
GIFHNECI_00751 0.0 3.2.1.97 GH101 G Glycosyl hydrolase 101 beta sandwich domain
GIFHNECI_00752 6.9e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GIFHNECI_00753 0.0 ftsK 2.7.11.1, 2.7.7.7, 3.4.21.110, 4.2.1.2 D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
GIFHNECI_00754 2.8e-115
GIFHNECI_00756 1.5e-175 T Pfam Adenylate and Guanylate cyclase catalytic domain
GIFHNECI_00757 6.1e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
GIFHNECI_00758 1.1e-79 ssb1 L Single-stranded DNA-binding protein
GIFHNECI_00759 2e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GIFHNECI_00760 5e-70 rplI J Binds to the 23S rRNA
GIFHNECI_00761 9e-28 S Parallel beta-helix repeats
GIFHNECI_00762 4.8e-51 E Domain of unknown function (DUF5011)
GIFHNECI_00764 3.7e-131 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
GIFHNECI_00765 3.1e-123 M Protein of unknown function (DUF3152)
GIFHNECI_00766 4.1e-186 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
GIFHNECI_00767 1e-145 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
GIFHNECI_00768 2e-51 acyP 3.6.1.7 C Acylphosphatase
GIFHNECI_00769 0.0 inlJ M domain protein
GIFHNECI_00770 1.9e-276 M LPXTG cell wall anchor motif
GIFHNECI_00771 6.3e-213 3.4.22.70 M Sortase family
GIFHNECI_00772 1e-68 S Domain of unknown function (DUF4854)
GIFHNECI_00773 4.2e-155 fahA Q Fumarylacetoacetate (FAA) hydrolase family
GIFHNECI_00774 2.6e-31 2.1.1.72 S Protein conserved in bacteria
GIFHNECI_00775 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GIFHNECI_00776 3.6e-132 M Mechanosensitive ion channel
GIFHNECI_00777 1.7e-119 K Bacterial regulatory proteins, tetR family
GIFHNECI_00778 1.5e-239 MA20_36090 S Psort location Cytoplasmic, score 8.87
GIFHNECI_00779 4.2e-233 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
GIFHNECI_00780 1.9e-76
GIFHNECI_00781 5.7e-24 M Belongs to the glycosyl hydrolase 28 family
GIFHNECI_00783 1.4e-68 S alpha beta
GIFHNECI_00784 0.0 fadD 6.2.1.3 I AMP-binding enzyme
GIFHNECI_00785 3.5e-07 S Scramblase
GIFHNECI_00790 2.2e-128 tam 2.1.1.144, 2.1.1.197 S Methyltransferase domain
GIFHNECI_00791 1.9e-236 K Helix-turn-helix XRE-family like proteins
GIFHNECI_00792 1.8e-53 relB L RelB antitoxin
GIFHNECI_00793 1.1e-59 T Toxic component of a toxin-antitoxin (TA) module
GIFHNECI_00794 2e-132 K helix_turn_helix, mercury resistance
GIFHNECI_00795 6.6e-243 yxiO S Vacuole effluxer Atg22 like
GIFHNECI_00797 6.5e-201 yegV G pfkB family carbohydrate kinase
GIFHNECI_00798 1.4e-29 rpmB J Ribosomal L28 family
GIFHNECI_00799 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
GIFHNECI_00800 6.5e-219 steT E amino acid
GIFHNECI_00803 0.0
GIFHNECI_00804 4.9e-248 U Sodium:dicarboxylate symporter family
GIFHNECI_00805 3.4e-121 rsmD 2.1.1.171 L Conserved hypothetical protein 95
GIFHNECI_00806 1.7e-105 XK27_02070 S Nitroreductase family
GIFHNECI_00807 2e-82 hsp20 O Hsp20/alpha crystallin family
GIFHNECI_00808 3.2e-165 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
GIFHNECI_00809 1.3e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GIFHNECI_00810 1.8e-34 CP_0960 S Belongs to the UPF0109 family
GIFHNECI_00811 1e-54 rpsP J Belongs to the bacterial ribosomal protein bS16 family
GIFHNECI_00812 1.9e-294 ydfD EK Alanine-glyoxylate amino-transferase
GIFHNECI_00813 1.3e-93 argO S LysE type translocator
GIFHNECI_00814 1.5e-219 S Endonuclease/Exonuclease/phosphatase family
GIFHNECI_00815 3.5e-270 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GIFHNECI_00816 1.4e-164 P Cation efflux family
GIFHNECI_00817 0.0 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
GIFHNECI_00818 2.3e-136 guaA1 6.3.5.2 F Peptidase C26
GIFHNECI_00819 0.0 yjjK S ABC transporter
GIFHNECI_00820 2e-58 S Protein of unknown function (DUF3039)
GIFHNECI_00821 1.1e-72 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GIFHNECI_00822 3.6e-107
GIFHNECI_00823 1.9e-112 yceD S Uncharacterized ACR, COG1399
GIFHNECI_00824 2.3e-19 rpmF J Belongs to the bacterial ribosomal protein bL32 family
GIFHNECI_00825 1e-139 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
GIFHNECI_00826 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
GIFHNECI_00827 7.6e-92 ilvN 2.2.1.6 E ACT domain
GIFHNECI_00830 5.7e-247 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GIFHNECI_00831 2.1e-134 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
GIFHNECI_00832 3.7e-117 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GIFHNECI_00833 4.6e-172 S Auxin Efflux Carrier
GIFHNECI_00836 0.0 pgi 5.3.1.9 G Belongs to the GPI family
GIFHNECI_00837 1.5e-190
GIFHNECI_00839 3.4e-200
GIFHNECI_00841 5.5e-122 mgtC S MgtC family
GIFHNECI_00842 0.0 mgtA 3.6.3.2 P Cation transporting ATPase, C-terminus
GIFHNECI_00843 4.8e-274 abcT3 P ATPases associated with a variety of cellular activities
GIFHNECI_00844 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
GIFHNECI_00846 1.4e-173 K Putative sugar-binding domain
GIFHNECI_00847 5.7e-212 gatC G PTS system sugar-specific permease component
GIFHNECI_00848 2.7e-293 2.7.1.53 G FGGY family of carbohydrate kinases, C-terminal domain
GIFHNECI_00849 1.2e-171 ulaE 5.1.3.22 G Xylose isomerase-like TIM barrel
GIFHNECI_00850 9.7e-129 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
GIFHNECI_00851 5.6e-62 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
GIFHNECI_00852 9.9e-157 lepB 3.4.21.89 U Belongs to the peptidase S26 family
GIFHNECI_00853 2.5e-132 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GIFHNECI_00854 8.7e-201 K helix_turn _helix lactose operon repressor
GIFHNECI_00855 0.0 fadD 6.2.1.3 I AMP-binding enzyme
GIFHNECI_00856 6.9e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
GIFHNECI_00857 1.1e-110 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
GIFHNECI_00860 5.8e-175 G Glycosyl hydrolases family 43
GIFHNECI_00861 2.9e-107 G Glycosyl hydrolases family 43
GIFHNECI_00862 4.7e-202 K helix_turn _helix lactose operon repressor
GIFHNECI_00863 3.3e-11 3.2.1.14 GH18 EM Domain of unknown function (DUF5011)
GIFHNECI_00864 2.9e-170 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
GIFHNECI_00865 2.9e-122 L Protein of unknown function (DUF1524)
GIFHNECI_00866 3.9e-224 mntH P H( )-stimulated, divalent metal cation uptake system
GIFHNECI_00867 1.1e-249 EGP Major facilitator Superfamily
GIFHNECI_00868 2.7e-216 rfbP M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
GIFHNECI_00869 4.6e-135 pflA S Protein of unknown function (DUF4012)
GIFHNECI_00870 1.5e-132
GIFHNECI_00872 3.5e-42 S Psort location CytoplasmicMembrane, score 9.99
GIFHNECI_00873 9.5e-68 S Psort location CytoplasmicMembrane, score 9.99
GIFHNECI_00874 2e-73 M Glycosyltransferase like family 2
GIFHNECI_00875 1.1e-160 L Transposase
GIFHNECI_00876 4.7e-137 L IstB-like ATP binding protein
GIFHNECI_00877 2.8e-133 L Transposase, Mutator family
GIFHNECI_00881 3.4e-61
GIFHNECI_00882 4.2e-176 5.1.3.37 P Domain of unknown function (DUF4143)
GIFHNECI_00883 6.1e-110 ysdA S Protein of unknown function (DUF1294)
GIFHNECI_00884 6.5e-247 S Psort location CytoplasmicMembrane, score 9.99
GIFHNECI_00885 5e-36 L Transposase
GIFHNECI_00886 1.9e-10 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
GIFHNECI_00887 2.2e-102 K cell envelope-related transcriptional attenuator
GIFHNECI_00888 1e-226
GIFHNECI_00889 1.7e-179 S G5
GIFHNECI_00890 3.2e-59 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
GIFHNECI_00891 1.5e-117 F Domain of unknown function (DUF4916)
GIFHNECI_00892 2.6e-160 mhpC I Alpha/beta hydrolase family
GIFHNECI_00893 2.4e-08 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
GIFHNECI_00894 0.0 enhA_2 S L,D-transpeptidase catalytic domain
GIFHNECI_00895 3.7e-72 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
GIFHNECI_00896 4.1e-240 S Uncharacterized conserved protein (DUF2183)
GIFHNECI_00897 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
GIFHNECI_00898 2.4e-192 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
GIFHNECI_00899 2.2e-119 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
GIFHNECI_00900 6.1e-134 glxR K helix_turn_helix, cAMP Regulatory protein
GIFHNECI_00901 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
GIFHNECI_00902 2.5e-219 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
GIFHNECI_00903 5.7e-227 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
GIFHNECI_00904 9.7e-144 glpR K DeoR C terminal sensor domain
GIFHNECI_00905 3.3e-252 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
GIFHNECI_00906 9.9e-233 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
GIFHNECI_00907 8.6e-243 EGP Sugar (and other) transporter
GIFHNECI_00908 4.2e-43 gcvR T Belongs to the UPF0237 family
GIFHNECI_00909 9.4e-253 S UPF0210 protein
GIFHNECI_00910 1.9e-188 S Membrane
GIFHNECI_00912 6.3e-122 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
GIFHNECI_00913 2.2e-66 exsH 3.2.1.178, 3.2.1.18, 3.2.1.52 GH16,GH20,GH33 G Putative cell wall binding repeat
GIFHNECI_00914 9.3e-35 exsH 3.2.1.178, 3.2.1.18, 3.2.1.52 GH16,GH20,GH33 G xyloglucan:xyloglucosyl transferase activity
GIFHNECI_00915 3e-184 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
GIFHNECI_00916 3.7e-94
GIFHNECI_00917 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GIFHNECI_00918 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GIFHNECI_00919 7.2e-95 T Forkhead associated domain
GIFHNECI_00920 2.8e-68 B Belongs to the OprB family
GIFHNECI_00921 1.3e-165 3.1.3.16 T Sigma factor PP2C-like phosphatases
GIFHNECI_00922 0.0 E Transglutaminase-like superfamily
GIFHNECI_00923 6.6e-227 S Protein of unknown function DUF58
GIFHNECI_00924 2.4e-229 S ATPase family associated with various cellular activities (AAA)
GIFHNECI_00925 0.0 S Fibronectin type 3 domain
GIFHNECI_00926 9.8e-269 KLT Protein tyrosine kinase
GIFHNECI_00927 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
GIFHNECI_00928 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
GIFHNECI_00929 2.6e-147 K -acetyltransferase
GIFHNECI_00930 3.8e-249 G Major Facilitator Superfamily
GIFHNECI_00931 6.4e-24 relB L RelB antitoxin
GIFHNECI_00932 1.5e-58 L Transposase
GIFHNECI_00933 1e-132 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
GIFHNECI_00934 1.9e-161 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GIFHNECI_00935 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GIFHNECI_00936 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
GIFHNECI_00937 6.3e-244 O Subtilase family
GIFHNECI_00938 1.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GIFHNECI_00939 1.2e-123 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GIFHNECI_00940 1e-270 S zinc finger
GIFHNECI_00941 1.4e-105 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
GIFHNECI_00942 1.1e-228 aspB E Aminotransferase class-V
GIFHNECI_00943 1.8e-157 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
GIFHNECI_00944 3.5e-132 tmp1 S Domain of unknown function (DUF4391)
GIFHNECI_00945 1.3e-148 moeB 2.7.7.80 H ThiF family
GIFHNECI_00946 1.6e-255 cdr OP Sulfurtransferase TusA
GIFHNECI_00947 5.3e-181 iunH1 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
GIFHNECI_00950 7.3e-203 S Endonuclease/Exonuclease/phosphatase family
GIFHNECI_00951 7.8e-43 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GIFHNECI_00952 4.2e-272 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GIFHNECI_00953 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
GIFHNECI_00954 2.5e-140 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GIFHNECI_00956 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
GIFHNECI_00957 4.5e-166
GIFHNECI_00958 1e-256 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
GIFHNECI_00959 0.0 plyA3 3.2.1.18 GH33 M Parallel beta-helix repeats
GIFHNECI_00961 4.1e-87 K MarR family
GIFHNECI_00962 0.0 V ABC transporter, ATP-binding protein
GIFHNECI_00963 0.0 V ABC transporter transmembrane region
GIFHNECI_00964 1.8e-168 S Patatin-like phospholipase
GIFHNECI_00965 3e-153 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
GIFHNECI_00966 2.5e-169 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
GIFHNECI_00967 7.6e-115 S Vitamin K epoxide reductase
GIFHNECI_00968 8.7e-167 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
GIFHNECI_00969 2.6e-30 S Protein of unknown function (DUF3107)
GIFHNECI_00970 2.8e-242 mphA S Aminoglycoside phosphotransferase
GIFHNECI_00971 3.1e-281 uvrD2 3.6.4.12 L DNA helicase
GIFHNECI_00972 5.1e-287 S Zincin-like metallopeptidase
GIFHNECI_00973 1.7e-151 lon T Belongs to the peptidase S16 family
GIFHNECI_00974 5.7e-47 S Protein of unknown function (DUF3052)
GIFHNECI_00975 1.2e-196 K helix_turn _helix lactose operon repressor
GIFHNECI_00976 1.2e-61 S Thiamine-binding protein
GIFHNECI_00977 4.1e-164 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
GIFHNECI_00978 6.9e-231 O AAA domain (Cdc48 subfamily)
GIFHNECI_00979 1.3e-84
GIFHNECI_00980 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
GIFHNECI_00981 6.1e-160 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
GIFHNECI_00982 0.0 lacZ 3.2.1.23 G Domain of unknown function (DUF4982)
GIFHNECI_00983 1.8e-300 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
GIFHNECI_00984 1.1e-224 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GIFHNECI_00985 7.3e-231 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GIFHNECI_00986 4.3e-80 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
GIFHNECI_00987 2.1e-42 yggT S YGGT family
GIFHNECI_00988 9.7e-90 3.1.21.3 V DivIVA protein
GIFHNECI_00989 4e-103 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GIFHNECI_00990 9e-178 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
GIFHNECI_00992 6e-63
GIFHNECI_00993 5.2e-147 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
GIFHNECI_00994 3.7e-202 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
GIFHNECI_00995 6.9e-190 ftsE D Cell division ATP-binding protein FtsE
GIFHNECI_00996 2.4e-159 ftsX D Part of the ABC transporter FtsEX involved in cellular division
GIFHNECI_00997 8.2e-162 usp 3.5.1.28 CBM50 D CHAP domain protein
GIFHNECI_00998 3e-76 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
GIFHNECI_00999 1e-147 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
GIFHNECI_01001 3.2e-90
GIFHNECI_01002 4.7e-14
GIFHNECI_01003 1.4e-12 L PFAM Integrase catalytic
GIFHNECI_01005 1.5e-201 2.7.11.1 NU Tfp pilus assembly protein FimV
GIFHNECI_01006 5.2e-223 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
GIFHNECI_01007 2.3e-235 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
GIFHNECI_01008 2.2e-293 I acetylesterase activity
GIFHNECI_01009 7e-144 recO L Involved in DNA repair and RecF pathway recombination
GIFHNECI_01010 1.8e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GIFHNECI_01011 5.1e-192 ywqG S Domain of unknown function (DUF1963)
GIFHNECI_01012 3.3e-38 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
GIFHNECI_01013 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
GIFHNECI_01014 5.8e-98 S zinc-ribbon domain
GIFHNECI_01015 2e-46 yhbY J CRS1_YhbY
GIFHNECI_01016 0.0 4.2.1.53 S MCRA family
GIFHNECI_01019 3.4e-202 K WYL domain
GIFHNECI_01020 5e-156 yvgN 1.1.1.346 S Aldo/keto reductase family
GIFHNECI_01021 6.4e-173 dkgA 1.1.1.346 C Aldo/keto reductase family
GIFHNECI_01022 1.2e-76 yneG S Domain of unknown function (DUF4186)
GIFHNECI_01024 4.7e-182 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
GIFHNECI_01025 1.2e-255 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
GIFHNECI_01026 4.2e-225 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
GIFHNECI_01027 1.2e-111 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
GIFHNECI_01028 1.3e-112
GIFHNECI_01029 1.1e-121 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
GIFHNECI_01030 1.7e-131 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
GIFHNECI_01031 1.9e-283 S Uncharacterized protein conserved in bacteria (DUF2252)
GIFHNECI_01032 2.1e-265 glnA2 6.3.1.2 E glutamine synthetase
GIFHNECI_01033 2.4e-248 S Domain of unknown function (DUF5067)
GIFHNECI_01034 2.7e-30 EGP Major facilitator Superfamily
GIFHNECI_01035 2.3e-46 tnp7109-21 L Integrase core domain
GIFHNECI_01036 7.9e-30
GIFHNECI_01038 9.2e-67
GIFHNECI_01039 2.8e-17 tnp3514b L Winged helix-turn helix
GIFHNECI_01040 4.2e-49 L Transposase and inactivated derivatives IS30 family
GIFHNECI_01041 5e-128 L PFAM Integrase catalytic
GIFHNECI_01042 1.5e-26 L PFAM Integrase catalytic
GIFHNECI_01043 5.4e-144 L IstB-like ATP binding protein
GIFHNECI_01044 2e-88 tnp3514b L Winged helix-turn helix
GIFHNECI_01045 1.6e-136 V HNH endonuclease
GIFHNECI_01046 8.4e-137 2.1.1.72 S Adenine-specific methyltransferase EcoRI
GIFHNECI_01048 9.5e-46 int8 L Phage integrase family
GIFHNECI_01049 5.3e-17 int8 L Phage integrase family
GIFHNECI_01050 4.2e-32 EGP Major facilitator Superfamily
GIFHNECI_01051 3.5e-175 M Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
GIFHNECI_01052 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
GIFHNECI_01053 7e-121 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
GIFHNECI_01054 1.9e-172
GIFHNECI_01055 3.1e-273 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GIFHNECI_01056 2.3e-176 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
GIFHNECI_01057 6e-166 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GIFHNECI_01058 7.5e-129 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GIFHNECI_01059 1.1e-49 M Lysin motif
GIFHNECI_01060 8.8e-83 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GIFHNECI_01061 4.1e-228 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
GIFHNECI_01062 0.0 L DNA helicase
GIFHNECI_01063 1.3e-90 mraZ K Belongs to the MraZ family
GIFHNECI_01064 1.6e-189 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
GIFHNECI_01065 1.1e-62 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
GIFHNECI_01066 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
GIFHNECI_01067 2.8e-180 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GIFHNECI_01068 1.3e-282 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
GIFHNECI_01069 3.6e-202 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GIFHNECI_01070 2.3e-265 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GIFHNECI_01071 4e-224 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
GIFHNECI_01072 6.5e-218 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GIFHNECI_01073 8.9e-295 murC 6.3.2.8 M Belongs to the MurCDEF family
GIFHNECI_01074 8.3e-155 ftsQ 6.3.2.4 D Cell division protein FtsQ
GIFHNECI_01075 8.2e-44 int8 L Phage integrase family
GIFHNECI_01076 8.5e-23
GIFHNECI_01079 5.6e-26 S Predicted membrane protein (DUF2335)
GIFHNECI_01080 8.7e-35 S Predicted membrane protein (DUF2335)
GIFHNECI_01081 6e-26 K Transcriptional regulator
GIFHNECI_01082 1.3e-11
GIFHNECI_01083 1.1e-07
GIFHNECI_01084 1e-12 L Phage integrase family
GIFHNECI_01085 2e-43 int8 L Phage integrase family
GIFHNECI_01086 4.9e-37
GIFHNECI_01088 1e-85 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GIFHNECI_01089 1.3e-235 G Major Facilitator Superfamily
GIFHNECI_01090 1.9e-169 2.7.1.4 G pfkB family carbohydrate kinase
GIFHNECI_01091 1.3e-224 GK ROK family
GIFHNECI_01092 3.4e-132 cutC P Participates in the control of copper homeostasis
GIFHNECI_01093 2.6e-216 GK ROK family
GIFHNECI_01094 6.6e-153 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GIFHNECI_01095 9.6e-244 nagA 3.5.1.25 G Amidohydrolase family
GIFHNECI_01096 8.2e-304 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
GIFHNECI_01097 2.5e-184 dppB EP Binding-protein-dependent transport system inner membrane component
GIFHNECI_01098 6.6e-191 dppC EP Binding-protein-dependent transport system inner membrane component
GIFHNECI_01099 0.0 P Belongs to the ABC transporter superfamily
GIFHNECI_01100 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
GIFHNECI_01101 4.3e-97 3.6.1.55 F NUDIX domain
GIFHNECI_01103 5.9e-286 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
GIFHNECI_01104 0.0 smc D Required for chromosome condensation and partitioning
GIFHNECI_01105 7.4e-129 racD 5.1.1.13 G Belongs to the aspartate glutamate racemases family
GIFHNECI_01106 2.8e-243 yxbA 6.3.1.12 S ATP-grasp
GIFHNECI_01107 1.3e-229 2.6.1.33 M DegT/DnrJ/EryC1/StrS aminotransferase family
GIFHNECI_01108 9.8e-191 V Acetyltransferase (GNAT) domain
GIFHNECI_01109 4.6e-296 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GIFHNECI_01110 1.1e-113 sigH K Belongs to the sigma-70 factor family. ECF subfamily
GIFHNECI_01111 1.7e-63
GIFHNECI_01112 1.8e-194 galM 5.1.3.3 G Aldose 1-epimerase
GIFHNECI_01113 5.5e-178 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
GIFHNECI_01114 8.4e-93 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GIFHNECI_01115 1e-198 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
GIFHNECI_01116 1.1e-133 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
GIFHNECI_01117 7.8e-08 S Spermine/spermidine synthase domain
GIFHNECI_01118 6.2e-110 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GIFHNECI_01119 2.1e-25 rpmI J Ribosomal protein L35
GIFHNECI_01120 9.6e-62 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GIFHNECI_01121 2.9e-179 xerD D recombinase XerD
GIFHNECI_01122 3.1e-152 soj D CobQ CobB MinD ParA nucleotide binding domain protein
GIFHNECI_01123 9.4e-150 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
GIFHNECI_01124 7.3e-98 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GIFHNECI_01125 2.5e-149 nrtR 3.6.1.55 F NUDIX hydrolase
GIFHNECI_01126 3.7e-251 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
GIFHNECI_01127 0.0 nadB 1.3.5.4, 1.4.3.16, 2.4.2.19 H Catalyzes the oxidation of L-aspartate to iminoaspartate
GIFHNECI_01128 2.4e-164 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, N-terminal domain
GIFHNECI_01129 4.4e-236 iscS1 2.8.1.7 E Aminotransferase class-V
GIFHNECI_01130 0.0 typA T Elongation factor G C-terminus
GIFHNECI_01131 1.7e-80
GIFHNECI_01132 4.2e-197 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
GIFHNECI_01133 3.7e-193 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
GIFHNECI_01134 7.3e-42
GIFHNECI_01135 3.6e-185 xerC D Belongs to the 'phage' integrase family. XerC subfamily
GIFHNECI_01136 7.9e-177 appB EP Binding-protein-dependent transport system inner membrane component
GIFHNECI_01137 3.5e-166 dppC EP N-terminal TM domain of oligopeptide transport permease C
GIFHNECI_01138 0.0 oppD P Belongs to the ABC transporter superfamily
GIFHNECI_01139 0.0 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
GIFHNECI_01140 5.9e-64 insK L Integrase core domain
GIFHNECI_01141 1.1e-272 pepC 3.4.22.40 E Peptidase C1-like family
GIFHNECI_01142 1.1e-169 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
GIFHNECI_01143 3.2e-139 S Protein of unknown function (DUF3710)
GIFHNECI_01144 6.1e-124 S Protein of unknown function (DUF3159)
GIFHNECI_01145 1.7e-248 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GIFHNECI_01146 1.2e-109
GIFHNECI_01147 0.0 ctpE P E1-E2 ATPase
GIFHNECI_01148 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
GIFHNECI_01149 1.1e-166 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
GIFHNECI_01150 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
GIFHNECI_01151 1.1e-53 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
GIFHNECI_01152 8.5e-221 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GIFHNECI_01153 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GIFHNECI_01154 3.2e-135 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GIFHNECI_01155 5.6e-183 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GIFHNECI_01156 4.3e-138 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
GIFHNECI_01158 0.0 arc O AAA ATPase forming ring-shaped complexes
GIFHNECI_01159 0.0 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
GIFHNECI_01160 2.4e-158 hisN 3.1.3.25 G Inositol monophosphatase family
GIFHNECI_01161 2e-10 pup S Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
GIFHNECI_01162 2.9e-268 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
GIFHNECI_01163 3.8e-47 insK L Integrase core domain
GIFHNECI_01164 8.1e-42 hup L Belongs to the bacterial histone-like protein family
GIFHNECI_01165 0.0 S Lysylphosphatidylglycerol synthase TM region
GIFHNECI_01166 3e-281 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
GIFHNECI_01167 2.2e-290 S PGAP1-like protein
GIFHNECI_01169 2.7e-74
GIFHNECI_01170 1.6e-148 S von Willebrand factor (vWF) type A domain
GIFHNECI_01171 1.2e-189 S von Willebrand factor (vWF) type A domain
GIFHNECI_01172 6.4e-94
GIFHNECI_01173 3.6e-172 S Protein of unknown function DUF58
GIFHNECI_01174 2.3e-196 moxR S ATPase family associated with various cellular activities (AAA)
GIFHNECI_01175 8e-145 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GIFHNECI_01176 3.4e-71 S LytR cell envelope-related transcriptional attenuator
GIFHNECI_01177 2.2e-44 cspA K 'Cold-shock' DNA-binding domain
GIFHNECI_01178 6.1e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
GIFHNECI_01179 1.7e-10 S Proteins of 100 residues with WXG
GIFHNECI_01180 3.8e-162
GIFHNECI_01181 1.6e-134 KT Response regulator receiver domain protein
GIFHNECI_01182 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GIFHNECI_01183 1e-66 cspB K 'Cold-shock' DNA-binding domain
GIFHNECI_01184 7.3e-192 S Protein of unknown function (DUF3027)
GIFHNECI_01185 4.7e-185 uspA T Belongs to the universal stress protein A family
GIFHNECI_01186 0.0 clpC O ATPase family associated with various cellular activities (AAA)
GIFHNECI_01189 6.6e-217 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
GIFHNECI_01190 3.3e-261 hisS 6.1.1.21 J Histidyl-tRNA synthetase
GIFHNECI_01191 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
GIFHNECI_01192 1.2e-62 K helix_turn_helix, Lux Regulon
GIFHNECI_01193 2.4e-92 S Aminoacyl-tRNA editing domain
GIFHNECI_01194 3.9e-139 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
GIFHNECI_01195 2.8e-146 gluB ET Belongs to the bacterial solute-binding protein 3 family
GIFHNECI_01196 6.8e-111 gluC E Binding-protein-dependent transport system inner membrane component
GIFHNECI_01197 6.3e-199 gluD E Binding-protein-dependent transport system inner membrane component
GIFHNECI_01198 6e-194 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
GIFHNECI_01199 0.0 helY L DEAD DEAH box helicase
GIFHNECI_01200 2.2e-257 rarA L Recombination factor protein RarA
GIFHNECI_01202 8.3e-255 EGP Major facilitator Superfamily
GIFHNECI_01203 0.0 ecfA GP ABC transporter, ATP-binding protein
GIFHNECI_01204 1.5e-104 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GIFHNECI_01205 5.1e-139 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
GIFHNECI_01206 2e-213 E Aminotransferase class I and II
GIFHNECI_01207 3.4e-138 bioM P ATPases associated with a variety of cellular activities
GIFHNECI_01208 1.6e-67 2.8.2.22 S Arylsulfotransferase Ig-like domain
GIFHNECI_01209 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
GIFHNECI_01210 0.0 S Tetratricopeptide repeat
GIFHNECI_01211 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GIFHNECI_01212 2.4e-209 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
GIFHNECI_01213 6.8e-161 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
GIFHNECI_01214 2e-86 int L Phage integrase, N-terminal SAM-like domain
GIFHNECI_01215 6.3e-115 L DNA restriction-modification system
GIFHNECI_01216 7.8e-33 3.1.21.4 L Recognizes the double-stranded sequence CTCGAG and cleaves after C-1
GIFHNECI_01217 7.4e-25 S GIY-YIG catalytic domain
GIFHNECI_01218 2.4e-29 L IstB-like ATP binding protein
GIFHNECI_01219 5.1e-48 S GIY-YIG catalytic domain
GIFHNECI_01223 5.5e-33 traSA D DNA segregation ATPase FtsK SpoIIIE
GIFHNECI_01225 4.7e-10
GIFHNECI_01226 1.8e-286 glnA 6.3.1.2 E glutamine synthetase
GIFHNECI_01227 3.8e-47 insK L Integrase core domain
GIFHNECI_01228 2.3e-142 S Domain of unknown function (DUF4191)
GIFHNECI_01229 2.9e-279 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GIFHNECI_01230 5.5e-104 S Protein of unknown function (DUF3043)
GIFHNECI_01231 1.2e-258 argE E Peptidase dimerisation domain
GIFHNECI_01232 3.7e-191 V N-Acetylmuramoyl-L-alanine amidase
GIFHNECI_01233 1.9e-152 ytrE V ATPases associated with a variety of cellular activities
GIFHNECI_01234 7.6e-197
GIFHNECI_01235 2.6e-228 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
GIFHNECI_01236 0.0 S Uncharacterised protein family (UPF0182)
GIFHNECI_01237 2.9e-204 tagB 2.7.8.14, 2.7.8.44, 2.7.8.47 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
GIFHNECI_01238 8.4e-34 tagH 3.6.3.38, 3.6.3.40 GM ABC transporter
GIFHNECI_01239 2.7e-97 2.3.1.183 M Acetyltransferase (GNAT) domain
GIFHNECI_01240 7.6e-114 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
GIFHNECI_01241 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GIFHNECI_01242 3.6e-293 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH chorismate binding enzyme
GIFHNECI_01243 6.4e-153 pabC 2.6.1.42, 2.6.1.85, 4.1.3.38 E branched-chain-amino-acid transaminase activity
GIFHNECI_01244 6.9e-245 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GIFHNECI_01245 6.1e-100 divIC D Septum formation initiator
GIFHNECI_01246 2e-106 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
GIFHNECI_01247 1.2e-183 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
GIFHNECI_01249 6.1e-97
GIFHNECI_01250 2.8e-279 sdaA 4.3.1.17 E Serine dehydratase alpha chain
GIFHNECI_01251 5.7e-73 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
GIFHNECI_01252 7.5e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GIFHNECI_01255 1.2e-106
GIFHNECI_01256 2e-142 yplQ S Haemolysin-III related
GIFHNECI_01257 8e-285 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GIFHNECI_01258 1.9e-46 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
GIFHNECI_01259 0.0 D FtsK/SpoIIIE family
GIFHNECI_01260 1.6e-269 K Cell envelope-related transcriptional attenuator domain
GIFHNECI_01261 5.8e-54 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
GIFHNECI_01262 0.0 S Glycosyl transferase, family 2
GIFHNECI_01263 3.6e-261
GIFHNECI_01264 6.3e-66 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
GIFHNECI_01265 3.4e-157 cof 5.2.1.8 T Eukaryotic phosphomannomutase
GIFHNECI_01266 1.5e-129 ctsW S Phosphoribosyl transferase domain
GIFHNECI_01267 2.1e-72 rulA 3.4.21.88 KT Peptidase S24-like
GIFHNECI_01268 1.9e-203 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GIFHNECI_01269 1.9e-127 T Response regulator receiver domain protein
GIFHNECI_01270 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
GIFHNECI_01271 5.1e-102 carD K CarD-like/TRCF domain
GIFHNECI_01272 8.5e-84 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
GIFHNECI_01273 4.3e-139 znuB U ABC 3 transport family
GIFHNECI_01274 1.3e-162 znuC P ATPases associated with a variety of cellular activities
GIFHNECI_01275 2.1e-172 P Zinc-uptake complex component A periplasmic
GIFHNECI_01276 1.8e-164 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GIFHNECI_01277 3.1e-241 rpsA J Ribosomal protein S1
GIFHNECI_01278 2.7e-106 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GIFHNECI_01279 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
GIFHNECI_01280 3e-179 terC P Integral membrane protein, TerC family
GIFHNECI_01281 6.6e-273 pyk 2.7.1.40 G Pyruvate kinase
GIFHNECI_01282 1.8e-110 aspA 3.6.1.13 L NUDIX domain
GIFHNECI_01284 9.2e-120 pdtaR T Response regulator receiver domain protein
GIFHNECI_01285 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GIFHNECI_01286 1.6e-171 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
GIFHNECI_01287 1.4e-119 3.6.1.13 L NUDIX domain
GIFHNECI_01288 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
GIFHNECI_01289 1.6e-219 ykiI
GIFHNECI_01291 7.4e-132 L Phage integrase family
GIFHNECI_01292 7.6e-109 3.4.13.21 E Peptidase family S51
GIFHNECI_01293 5.4e-275 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
GIFHNECI_01294 9.8e-233 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GIFHNECI_01295 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
GIFHNECI_01298 7.2e-237 dcm 2.1.1.37 H C-5 cytosine-specific DNA methylase
GIFHNECI_01299 1.8e-267 S MvaI/BcnI restriction endonuclease family
GIFHNECI_01300 2.5e-31
GIFHNECI_01301 1e-14 gntR K FCD
GIFHNECI_01302 5.9e-65 L protein secretion by the type IV secretion system
GIFHNECI_01304 2.9e-117 S Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A
GIFHNECI_01305 8.2e-42 L PFAM Integrase catalytic
GIFHNECI_01306 1.5e-18 L Integrase core domain
GIFHNECI_01307 4.1e-144 L IstB-like ATP binding protein
GIFHNECI_01308 1.9e-269 L PFAM Integrase catalytic
GIFHNECI_01309 3.8e-23 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
GIFHNECI_01310 2.5e-302 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
GIFHNECI_01311 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
GIFHNECI_01312 3.4e-189 pit P Phosphate transporter family
GIFHNECI_01313 1.1e-115 MA20_27875 P Protein of unknown function DUF47
GIFHNECI_01314 3.1e-119 K helix_turn_helix, Lux Regulon
GIFHNECI_01315 2.4e-234 T Histidine kinase
GIFHNECI_01316 1.2e-42 pacL 3.6.3.8, 3.6.3.9 P ATPase, P-type transporting, HAD superfamily, subfamily IC
GIFHNECI_01317 2.6e-180 V ATPases associated with a variety of cellular activities
GIFHNECI_01318 8.1e-227 V ABC-2 family transporter protein
GIFHNECI_01319 1.1e-251 V ABC-2 family transporter protein
GIFHNECI_01320 2.3e-284 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
GIFHNECI_01321 5.7e-197 L Transposase and inactivated derivatives IS30 family
GIFHNECI_01322 4.9e-193 M Glycosyltransferase like family 2
GIFHNECI_01323 0.0 rgpF M Rhamnan synthesis protein F
GIFHNECI_01324 8.8e-292 S Tetratricopeptide repeat
GIFHNECI_01325 1.1e-26 2.1.1.72 S Adenine-specific methyltransferase EcoRI
GIFHNECI_01326 2.4e-40
GIFHNECI_01327 5.6e-112 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
GIFHNECI_01329 3.2e-15 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
GIFHNECI_01330 2.1e-47 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
GIFHNECI_01332 4.1e-240 pbuX F Permease family
GIFHNECI_01333 1.9e-106 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
GIFHNECI_01334 0.0 yrhL I Psort location CytoplasmicMembrane, score 9.99
GIFHNECI_01335 0.0 pcrA 3.6.4.12 L DNA helicase
GIFHNECI_01336 8.2e-64 S Domain of unknown function (DUF4418)
GIFHNECI_01337 1.9e-212 V FtsX-like permease family
GIFHNECI_01338 1.3e-127 lolD V ABC transporter
GIFHNECI_01339 1e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GIFHNECI_01340 0.0 oatA I Psort location CytoplasmicMembrane, score 9.99
GIFHNECI_01341 9.8e-136 pgm3 G Phosphoglycerate mutase family
GIFHNECI_01342 3.8e-64 WQ51_05790 S Bacterial protein of unknown function (DUF948)
GIFHNECI_01343 1.1e-36
GIFHNECI_01344 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GIFHNECI_01345 3e-75 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GIFHNECI_01346 3.5e-187 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GIFHNECI_01347 1.3e-47 3.4.23.43 S Type IV leader peptidase family
GIFHNECI_01348 1.6e-219 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
GIFHNECI_01349 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
GIFHNECI_01350 5.9e-79 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
GIFHNECI_01351 3.3e-75
GIFHNECI_01352 1.7e-120 K helix_turn_helix, Lux Regulon
GIFHNECI_01353 2.6e-07 3.4.22.70 M Sortase family
GIFHNECI_01354 3e-62 L Transposase and inactivated derivatives IS30 family
GIFHNECI_01355 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
GIFHNECI_01356 3.6e-290 sufB O FeS assembly protein SufB
GIFHNECI_01357 1.5e-233 sufD O FeS assembly protein SufD
GIFHNECI_01358 1.4e-144 sufC O FeS assembly ATPase SufC
GIFHNECI_01359 2.9e-240 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GIFHNECI_01360 8.8e-101 iscU C SUF system FeS assembly protein, NifU family
GIFHNECI_01361 1.2e-108 yitW S Iron-sulfur cluster assembly protein
GIFHNECI_01362 4.7e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
GIFHNECI_01363 4e-164 spoU 2.1.1.185 J SpoU rRNA Methylase family
GIFHNECI_01365 2.1e-135 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
GIFHNECI_01366 4.4e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
GIFHNECI_01367 6.5e-196 phoH T PhoH-like protein
GIFHNECI_01368 7.4e-100 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GIFHNECI_01369 2.4e-251 corC S CBS domain
GIFHNECI_01370 1.5e-186 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GIFHNECI_01371 0.0 fadD 6.2.1.3 I AMP-binding enzyme
GIFHNECI_01372 1.1e-201 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
GIFHNECI_01373 4.4e-44 pntA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
GIFHNECI_01374 2.3e-233 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
GIFHNECI_01375 1.1e-189 S alpha beta
GIFHNECI_01376 8.3e-95 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
GIFHNECI_01377 2.4e-225 ilvE 2.6.1.42 E Amino-transferase class IV
GIFHNECI_01378 3e-101 3.1.4.37 T RNA ligase
GIFHNECI_01379 1.2e-135 S UPF0126 domain
GIFHNECI_01380 9.9e-34 rpsT J Binds directly to 16S ribosomal RNA
GIFHNECI_01381 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
GIFHNECI_01382 6.3e-244 hemN H Involved in the biosynthesis of porphyrin-containing compound
GIFHNECI_01383 4e-13 S Membrane
GIFHNECI_01384 4.7e-288 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
GIFHNECI_01385 0.0 tetP J Elongation factor G, domain IV
GIFHNECI_01386 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
GIFHNECI_01387 2.7e-304 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
GIFHNECI_01388 3.6e-82
GIFHNECI_01389 1.1e-244 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
GIFHNECI_01390 8.9e-164 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
GIFHNECI_01391 3.6e-163 ybeM S Carbon-nitrogen hydrolase
GIFHNECI_01392 2.4e-115 S Sel1-like repeats.
GIFHNECI_01393 1.2e-185 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GIFHNECI_01394 3.2e-96 L Transposase
GIFHNECI_01395 2.6e-64 L Transposase
GIFHNECI_01396 1.6e-28
GIFHNECI_01397 8.7e-127 XK26_04895
GIFHNECI_01398 2.4e-73 K Helix-turn-helix domain protein
GIFHNECI_01400 1.6e-25 L transposase activity
GIFHNECI_01401 5.3e-36 L IstB-like ATP binding protein
GIFHNECI_01402 7e-153 L PFAM Integrase catalytic
GIFHNECI_01403 0.0 S Protein of unknown function DUF262
GIFHNECI_01404 2.8e-28
GIFHNECI_01405 8.8e-43 rarD 3.4.17.13 E Rard protein
GIFHNECI_01406 1.7e-30 rarD 3.4.17.13 E Rard protein
GIFHNECI_01407 8.8e-178 I alpha/beta hydrolase fold
GIFHNECI_01408 7.4e-208 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
GIFHNECI_01409 1.2e-100 sixA T Phosphoglycerate mutase family
GIFHNECI_01410 8.7e-242 int L Phage integrase, N-terminal SAM-like domain
GIFHNECI_01411 1.1e-21
GIFHNECI_01412 1.1e-34
GIFHNECI_01413 4.5e-233 S Protein of unknown function DUF262
GIFHNECI_01414 4.2e-49
GIFHNECI_01415 2.5e-104 S Virulence protein RhuM family
GIFHNECI_01416 6.8e-123 S Domain of unknown function DUF1829
GIFHNECI_01417 3.1e-35
GIFHNECI_01418 1.6e-51
GIFHNECI_01419 1.4e-34
GIFHNECI_01420 9.4e-48
GIFHNECI_01421 3.7e-132 K BRO family, N-terminal domain
GIFHNECI_01425 2.3e-34
GIFHNECI_01426 2.2e-37
GIFHNECI_01428 1.2e-35
GIFHNECI_01430 4.3e-89 ssb1 L Single-strand binding protein family
GIFHNECI_01431 1.6e-268 K ParB-like nuclease domain
GIFHNECI_01432 5.4e-119 K Transcriptional regulator
GIFHNECI_01433 1.6e-25
GIFHNECI_01434 3.1e-79 V HNH endonuclease
GIFHNECI_01435 4.3e-106 A 3'-to-5' exoribonuclease specific for small oligoribonucleotides
GIFHNECI_01437 8.8e-50
GIFHNECI_01439 1.3e-134
GIFHNECI_01440 3.2e-32 K Transcriptional regulator
GIFHNECI_01443 1.5e-114 S Bifunctional DNA primase/polymerase, N-terminal
GIFHNECI_01444 4.8e-69
GIFHNECI_01445 0.0 S Terminase
GIFHNECI_01446 1.4e-280 S Phage portal protein, SPP1 Gp6-like
GIFHNECI_01447 1.5e-238
GIFHNECI_01448 1.1e-43
GIFHNECI_01449 6.6e-96
GIFHNECI_01450 3.8e-176 S Phage capsid family
GIFHNECI_01451 8.1e-65
GIFHNECI_01452 9.8e-91
GIFHNECI_01453 1.3e-78
GIFHNECI_01454 6.1e-73
GIFHNECI_01455 4.9e-72
GIFHNECI_01456 3.9e-93
GIFHNECI_01457 1.3e-82
GIFHNECI_01458 6.3e-53
GIFHNECI_01459 0.0 S Phage-related minor tail protein
GIFHNECI_01460 1.3e-145 S phage tail
GIFHNECI_01461 0.0 S Prophage endopeptidase tail
GIFHNECI_01462 1e-66
GIFHNECI_01463 3.4e-205
GIFHNECI_01465 3.9e-69
GIFHNECI_01467 1.9e-66 S SPP1 phage holin
GIFHNECI_01468 2.2e-127 3.5.1.28 M NLP P60 protein
GIFHNECI_01472 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GIFHNECI_01473 9.6e-163 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
GIFHNECI_01475 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
GIFHNECI_01476 1.4e-181 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
GIFHNECI_01477 2e-73 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
GIFHNECI_01478 1e-278 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
GIFHNECI_01479 7.5e-180 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
GIFHNECI_01480 1.7e-156 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
GIFHNECI_01481 2.8e-179 pyrD 1.3.1.14 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
GIFHNECI_01482 6.5e-125 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GIFHNECI_01483 1e-16 K MerR family regulatory protein
GIFHNECI_01484 3.1e-195 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
GIFHNECI_01485 5.7e-142
GIFHNECI_01486 1.5e-17 K Psort location Cytoplasmic, score
GIFHNECI_01487 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
GIFHNECI_01488 1.3e-241 vbsD V MatE
GIFHNECI_01489 2.1e-131 S Enoyl-(Acyl carrier protein) reductase
GIFHNECI_01490 2.3e-133 magIII L endonuclease III
GIFHNECI_01491 5e-93 laaE K Transcriptional regulator PadR-like family
GIFHNECI_01492 4e-176 S Membrane transport protein
GIFHNECI_01493 1.1e-67 4.1.1.44 S Cupin domain
GIFHNECI_01494 7e-225 hipA 2.7.11.1 S HipA N-terminal domain
GIFHNECI_01495 1.4e-40 K Helix-turn-helix
GIFHNECI_01496 2.2e-47 tam 2.1.1.144, 2.1.1.197 FG trans-aconitate 2-methyltransferase activity
GIFHNECI_01497 2.1e-18
GIFHNECI_01498 1.9e-101 K Bacterial regulatory proteins, tetR family
GIFHNECI_01499 1.4e-62 T Domain of unknown function (DUF4234)
GIFHNECI_01500 1.2e-171 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
GIFHNECI_01501 2.7e-122 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GIFHNECI_01502 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GIFHNECI_01503 4e-144 4.1.1.44 S Carboxymuconolactone decarboxylase family
GIFHNECI_01504 2.3e-90 dkgB S Oxidoreductase, aldo keto reductase family protein
GIFHNECI_01506 6.3e-287 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
GIFHNECI_01507 0.0 pafB K WYL domain
GIFHNECI_01508 1.7e-51
GIFHNECI_01509 0.0 helY L DEAD DEAH box helicase
GIFHNECI_01510 3e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
GIFHNECI_01511 7.3e-143 pgp 3.1.3.18 S HAD-hyrolase-like
GIFHNECI_01513 4.1e-144 L IstB-like ATP binding protein
GIFHNECI_01514 1.1e-105 L PFAM Integrase catalytic
GIFHNECI_01517 6.2e-90 K Putative zinc ribbon domain
GIFHNECI_01518 7.2e-126 S GyrI-like small molecule binding domain
GIFHNECI_01519 3.3e-24 L DNA integration
GIFHNECI_01521 1.9e-62
GIFHNECI_01522 8e-120 K helix_turn_helix, mercury resistance
GIFHNECI_01523 9.6e-74 garA T Inner membrane component of T3SS, cytoplasmic domain
GIFHNECI_01524 1.3e-140 S Bacterial protein of unknown function (DUF881)
GIFHNECI_01525 2.6e-31 sbp S Protein of unknown function (DUF1290)
GIFHNECI_01526 1.4e-173 S Bacterial protein of unknown function (DUF881)
GIFHNECI_01527 4.4e-115 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GIFHNECI_01528 1.8e-156 hisG 2.4.2.17 F ATP phosphoribosyltransferase
GIFHNECI_01529 6.4e-41 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
GIFHNECI_01530 6.3e-101 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
GIFHNECI_01531 4.5e-180 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GIFHNECI_01532 6.4e-162 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
GIFHNECI_01533 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
GIFHNECI_01534 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
GIFHNECI_01535 7.5e-146 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GIFHNECI_01536 4.1e-103 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GIFHNECI_01537 5.7e-30
GIFHNECI_01538 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
GIFHNECI_01539 2.2e-246
GIFHNECI_01540 2e-166 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
GIFHNECI_01541 9.6e-225 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
GIFHNECI_01542 5.5e-101 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GIFHNECI_01543 2.6e-44 yajC U Preprotein translocase subunit
GIFHNECI_01544 1.9e-200 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
GIFHNECI_01545 2.5e-104 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
GIFHNECI_01547 1.8e-99 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
GIFHNECI_01548 1e-131 yebC K transcriptional regulatory protein
GIFHNECI_01549 0.0 3.2.1.52 GH20 M Glycosyl hydrolase family 20, catalytic domain
GIFHNECI_01550 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GIFHNECI_01551 4.2e-249 U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
GIFHNECI_01554 1.5e-257
GIFHNECI_01558 2.8e-156 S PAC2 family
GIFHNECI_01559 5e-168 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
GIFHNECI_01560 7.1e-160 G Fructosamine kinase
GIFHNECI_01561 3.4e-211 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
GIFHNECI_01562 8.2e-219 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
GIFHNECI_01563 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
GIFHNECI_01564 1e-201 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
GIFHNECI_01565 1.1e-142 yoaK S Protein of unknown function (DUF1275)
GIFHNECI_01566 7.5e-253 brnQ U Component of the transport system for branched-chain amino acids
GIFHNECI_01569 5.2e-243 mepA_6 V MatE
GIFHNECI_01570 8e-162 S Sucrose-6F-phosphate phosphohydrolase
GIFHNECI_01571 7.7e-177 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
GIFHNECI_01572 8e-33 secG U Preprotein translocase SecG subunit
GIFHNECI_01573 5.3e-147 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GIFHNECI_01574 7.6e-222 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
GIFHNECI_01575 3.1e-173 whiA K May be required for sporulation
GIFHNECI_01576 4.5e-177 rapZ S Displays ATPase and GTPase activities
GIFHNECI_01577 7.5e-180 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
GIFHNECI_01578 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
GIFHNECI_01579 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
GIFHNECI_01580 1e-76
GIFHNECI_01581 1.8e-58 V MacB-like periplasmic core domain
GIFHNECI_01582 3.3e-118 K Transcriptional regulatory protein, C terminal
GIFHNECI_01583 3.9e-233 qseC 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
GIFHNECI_01584 4.5e-140 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
GIFHNECI_01585 2.6e-302 ybiT S ABC transporter
GIFHNECI_01586 7.2e-197 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
GIFHNECI_01587 4.3e-307 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
GIFHNECI_01588 2.8e-207 mdsC 2.7.1.162, 2.7.1.39 S Phosphotransferase enzyme family
GIFHNECI_01589 3.2e-217 GK ROK family
GIFHNECI_01590 6.9e-178 2.7.1.2 GK ROK family
GIFHNECI_01591 0.0 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
GIFHNECI_01592 1.6e-166 G ABC transporter permease
GIFHNECI_01593 4e-173 G Binding-protein-dependent transport system inner membrane component
GIFHNECI_01594 2.2e-243 G Bacterial extracellular solute-binding protein
GIFHNECI_01595 1e-306 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
GIFHNECI_01596 5.3e-74 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
GIFHNECI_01597 1.4e-139 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
GIFHNECI_01598 1.2e-227 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
GIFHNECI_01599 1.8e-176 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
GIFHNECI_01600 5.2e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
GIFHNECI_01601 2.4e-133 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
GIFHNECI_01602 1e-127 3.2.1.8 S alpha beta
GIFHNECI_01603 4.8e-146 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GIFHNECI_01604 1.4e-145 rpsB J Belongs to the universal ribosomal protein uS2 family
GIFHNECI_01605 1.7e-87 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GIFHNECI_01606 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
GIFHNECI_01607 3.4e-91
GIFHNECI_01608 2.5e-200 guaB 1.1.1.205 F IMP dehydrogenase family protein
GIFHNECI_01609 3.3e-241 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
GIFHNECI_01610 1.6e-275 G ABC transporter substrate-binding protein
GIFHNECI_01611 4.3e-280 fadD1 6.2.1.3 I AMP-binding enzyme
GIFHNECI_01612 1.4e-59 fadD1 6.2.1.3 I AMP-binding enzyme
GIFHNECI_01613 2.4e-131 M Peptidase family M23
GIFHNECI_01615 1.1e-195 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GIFHNECI_01616 2e-103 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
GIFHNECI_01617 9.5e-158 yeaZ 2.3.1.234 O Glycoprotease family
GIFHNECI_01618 3.8e-119 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
GIFHNECI_01619 4.8e-182 holA 2.7.7.7 L DNA polymerase III delta subunit
GIFHNECI_01620 0.0 comE S Competence protein
GIFHNECI_01621 4e-89 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
GIFHNECI_01622 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
GIFHNECI_01623 5.8e-169 ET Bacterial periplasmic substrate-binding proteins
GIFHNECI_01624 4.8e-171 corA P CorA-like Mg2+ transporter protein
GIFHNECI_01625 2.3e-161 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
GIFHNECI_01626 1.9e-297 E Serine carboxypeptidase
GIFHNECI_01627 0.0 S Psort location Cytoplasmic, score 8.87
GIFHNECI_01628 1.7e-108 S Domain of unknown function (DUF4194)
GIFHNECI_01629 8.8e-284 S Psort location Cytoplasmic, score 8.87
GIFHNECI_01630 1.1e-161 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
GIFHNECI_01631 7.6e-64 yeaO K Protein of unknown function, DUF488
GIFHNECI_01632 1.6e-125 ydaF_1 J Acetyltransferase (GNAT) domain
GIFHNECI_01633 2.2e-90 MA20_25245 K FR47-like protein
GIFHNECI_01634 4.3e-56 K Transcriptional regulator
GIFHNECI_01635 1.7e-100 XK27_07525 3.6.1.55 F Hydrolase of X-linked nucleoside diphosphate N terminal
GIFHNECI_01636 4.1e-20 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
GIFHNECI_01638 2.5e-183 S Acetyltransferase (GNAT) domain
GIFHNECI_01639 4.2e-49 L Transposase and inactivated derivatives IS30 family
GIFHNECI_01640 1.4e-132 S SOS response associated peptidase (SRAP)
GIFHNECI_01641 8.8e-122
GIFHNECI_01642 2.1e-79 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GIFHNECI_01643 3.4e-164 rpoC M heme binding
GIFHNECI_01644 2.3e-28 EGP Major facilitator Superfamily
GIFHNECI_01645 7.1e-98 EGP Major facilitator Superfamily
GIFHNECI_01647 4e-159
GIFHNECI_01648 3e-96 ypjC S Putative ABC-transporter type IV
GIFHNECI_01649 2.3e-110 ycaK 1.6.5.2 S NADPH-dependent FMN reductase
GIFHNECI_01650 3.7e-193 V VanZ like family
GIFHNECI_01651 4.6e-146 KT RESPONSE REGULATOR receiver
GIFHNECI_01652 3.5e-70 pdxH S Pfam:Pyridox_oxidase
GIFHNECI_01653 7.5e-142 yijF S Domain of unknown function (DUF1287)
GIFHNECI_01654 5e-133 C Putative TM nitroreductase
GIFHNECI_01655 3.8e-96
GIFHNECI_01657 3.2e-255 nplT 3.2.1.1 GH13 G Alpha amylase, catalytic domain
GIFHNECI_01658 1.3e-78 S Bacterial PH domain
GIFHNECI_01659 2.7e-137 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
GIFHNECI_01660 2.4e-69 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
GIFHNECI_01661 3.2e-264 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GIFHNECI_01663 2.4e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GIFHNECI_01664 1.6e-145 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GIFHNECI_01665 2.2e-91
GIFHNECI_01666 5.3e-237 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
GIFHNECI_01667 1.7e-284 thrC 4.2.3.1 E Threonine synthase N terminus
GIFHNECI_01668 8.1e-123 S ABC-2 family transporter protein
GIFHNECI_01669 3.7e-126 S ABC-2 family transporter protein
GIFHNECI_01670 7.7e-177 V ATPases associated with a variety of cellular activities
GIFHNECI_01671 3.7e-58 K helix_turn_helix gluconate operon transcriptional repressor
GIFHNECI_01672 8.9e-124 S Haloacid dehalogenase-like hydrolase
GIFHNECI_01673 4.1e-293 recN L May be involved in recombinational repair of damaged DNA
GIFHNECI_01674 7.3e-183 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GIFHNECI_01675 8.6e-236 trkB P Cation transport protein
GIFHNECI_01676 6.8e-116 trkA P TrkA-N domain
GIFHNECI_01677 8.3e-101
GIFHNECI_01678 3.6e-137 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
GIFHNECI_01680 5e-190 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
GIFHNECI_01681 3.6e-159 L Tetratricopeptide repeat
GIFHNECI_01682 3.7e-254 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GIFHNECI_01683 1.6e-143 S Putative ABC-transporter type IV
GIFHNECI_01684 8e-108 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
GIFHNECI_01685 4e-281 argH 4.3.2.1 E argininosuccinate lyase
GIFHNECI_01686 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
GIFHNECI_01687 3.2e-281 3.6.4.12 K Putative DNA-binding domain
GIFHNECI_01688 1.8e-95 3.1.21.3 V restriction
GIFHNECI_01689 0.0 hsdM 2.1.1.72 V modification (methylase) protein of type I restriction-modification system K03427
GIFHNECI_01690 1.7e-156 S Domain of unknown function (DUF4357)
GIFHNECI_01691 2.4e-30
GIFHNECI_01692 2e-73 hsdS 3.1.21.3 V type I restriction modification DNA specificity domain
GIFHNECI_01693 3.8e-178 L Phage integrase family
GIFHNECI_01694 4.1e-239 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
GIFHNECI_01695 1.4e-84 argR K Regulates arginine biosynthesis genes
GIFHNECI_01696 5e-184 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GIFHNECI_01697 2.5e-247 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
GIFHNECI_01698 1.7e-179 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
GIFHNECI_01699 1.2e-192 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
GIFHNECI_01700 2.2e-204 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
GIFHNECI_01701 3.6e-90
GIFHNECI_01702 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
GIFHNECI_01703 3.1e-203 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GIFHNECI_01704 7e-161 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GIFHNECI_01705 4.5e-135 ybbL V ATPases associated with a variety of cellular activities
GIFHNECI_01706 4.2e-136 ybbM V Uncharacterised protein family (UPF0014)
GIFHNECI_01707 5.7e-52 IQ oxidoreductase activity
GIFHNECI_01709 2.2e-42 K AraC-like ligand binding domain
GIFHNECI_01710 1.5e-236 rutG F Permease family
GIFHNECI_01711 1.1e-158 3.1.3.73 G Phosphoglycerate mutase family
GIFHNECI_01712 3.9e-63 S Phospholipase/Carboxylesterase
GIFHNECI_01713 3.1e-187 MA20_14895 S Conserved hypothetical protein 698
GIFHNECI_01714 4.3e-144 rlrG K Bacterial regulatory helix-turn-helix protein, lysR family
GIFHNECI_01715 8.4e-119 3.1.3.27 E haloacid dehalogenase-like hydrolase
GIFHNECI_01716 1.4e-289 2.4.1.166 GT2 M Glycosyltransferase like family 2
GIFHNECI_01718 0.0 pbpB 2.7.11.1, 3.4.16.4 S PASTA domain
GIFHNECI_01719 2.1e-125 ypfH S Phospholipase/Carboxylesterase
GIFHNECI_01720 2.7e-73 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
GIFHNECI_01721 1.9e-24
GIFHNECI_01722 1.2e-34 yhcC S Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
GIFHNECI_01723 1.1e-65 S Zincin-like metallopeptidase
GIFHNECI_01724 1.9e-85 S Helix-turn-helix
GIFHNECI_01725 2.5e-199 S Short C-terminal domain
GIFHNECI_01726 2.7e-22
GIFHNECI_01727 1.7e-147
GIFHNECI_01728 4.5e-79 K Psort location Cytoplasmic, score
GIFHNECI_01729 2.2e-256 KLT Protein tyrosine kinase
GIFHNECI_01730 7.9e-66 S Cupin 2, conserved barrel domain protein
GIFHNECI_01731 3.4e-155 ksgA 2.1.1.182 J Methyltransferase domain
GIFHNECI_01732 5.6e-59 yccF S Inner membrane component domain
GIFHNECI_01733 2.5e-119 E Psort location Cytoplasmic, score 8.87
GIFHNECI_01734 4.8e-246 XK27_00240 K Fic/DOC family
GIFHNECI_01735 1.4e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
GIFHNECI_01736 2e-230 mtnE 2.6.1.83 E Aminotransferase class I and II
GIFHNECI_01737 4.9e-93 metI P Binding-protein-dependent transport system inner membrane component
GIFHNECI_01738 1.6e-205 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GIFHNECI_01739 1.7e-182 1.2.4.1 C Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit
GIFHNECI_01740 5.5e-186 acoA 1.2.4.1 C Dehydrogenase E1 component
GIFHNECI_01741 1.2e-146 P NLPA lipoprotein
GIFHNECI_01742 2.7e-166 iaaA 3.4.19.5, 3.5.1.1 E Asparaginase
GIFHNECI_01743 1.2e-143 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GIFHNECI_01744 1.9e-264 pip 3.4.11.5 S alpha/beta hydrolase fold
GIFHNECI_01745 7.5e-208 L Transposase and inactivated derivatives IS30 family
GIFHNECI_01746 0.0 tcsS2 T Histidine kinase
GIFHNECI_01747 6.1e-132 K helix_turn_helix, Lux Regulon
GIFHNECI_01748 0.0 phoN I PAP2 superfamily
GIFHNECI_01749 0.0 MV MacB-like periplasmic core domain
GIFHNECI_01750 3.4e-162 V ABC transporter, ATP-binding protein
GIFHNECI_01751 2.2e-251 metY 2.5.1.49 E Aminotransferase class-V
GIFHNECI_01752 7.9e-157 S Putative ABC-transporter type IV
GIFHNECI_01753 1.5e-166 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
GIFHNECI_01754 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
GIFHNECI_01755 2e-283 dprA 5.99.1.2 LU DNA recombination-mediator protein A
GIFHNECI_01756 1.9e-294 comM O Magnesium chelatase, subunit ChlI C-terminal
GIFHNECI_01757 1.1e-70 yraN L Belongs to the UPF0102 family
GIFHNECI_01758 5.6e-183 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
GIFHNECI_01759 4.4e-118 safC S O-methyltransferase
GIFHNECI_01760 8.4e-168 fmt2 3.2.2.10 S Belongs to the LOG family
GIFHNECI_01761 5.9e-225 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
GIFHNECI_01762 6.5e-234 patB 4.4.1.8 E Aminotransferase, class I II
GIFHNECI_01765 5.5e-242 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GIFHNECI_01766 1.5e-127 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GIFHNECI_01767 1.1e-112 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GIFHNECI_01768 6.7e-254 clcA_2 P Voltage gated chloride channel
GIFHNECI_01769 8.1e-236 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
GIFHNECI_01770 2.7e-249 rnd 3.1.13.5 J 3'-5' exonuclease
GIFHNECI_01771 4.4e-114 S Protein of unknown function (DUF3000)
GIFHNECI_01772 3.9e-175 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GIFHNECI_01773 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
GIFHNECI_01774 3.5e-38
GIFHNECI_01775 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GIFHNECI_01776 5e-223 S Peptidase dimerisation domain
GIFHNECI_01777 2.8e-10 P ABC-type metal ion transport system permease component
GIFHNECI_01778 4.1e-36 P ABC-type metal ion transport system permease component
GIFHNECI_01779 1.4e-166 S Sucrose-6F-phosphate phosphohydrolase
GIFHNECI_01780 3.3e-176 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GIFHNECI_01781 2.3e-34
GIFHNECI_01782 6.3e-50
GIFHNECI_01783 4.3e-132
GIFHNECI_01784 5.5e-118
GIFHNECI_01785 1.2e-28
GIFHNECI_01786 7.7e-184 S Helix-turn-helix domain
GIFHNECI_01787 2.5e-42
GIFHNECI_01788 1.7e-90 S Transcription factor WhiB
GIFHNECI_01789 8.2e-117 parA D AAA domain
GIFHNECI_01790 9.7e-27
GIFHNECI_01791 2.2e-96
GIFHNECI_01792 1.2e-233 S HipA-like C-terminal domain
GIFHNECI_01793 5.8e-48
GIFHNECI_01794 9.4e-60
GIFHNECI_01795 2.9e-82
GIFHNECI_01796 0.0 topB 5.99.1.2 L DNA topoisomerase
GIFHNECI_01797 1.5e-86
GIFHNECI_01798 3e-55
GIFHNECI_01799 3.6e-41 S Protein of unknown function (DUF2442)
GIFHNECI_01800 6.9e-52 S Bacterial mobilisation protein (MobC)
GIFHNECI_01801 5.4e-279 ltrBE1 U Relaxase/Mobilisation nuclease domain
GIFHNECI_01802 1.1e-163 S Protein of unknown function (DUF3801)
GIFHNECI_01803 1.7e-284
GIFHNECI_01805 0.0 XK27_00500 KL Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
GIFHNECI_01806 7.1e-39
GIFHNECI_01807 9.3e-31
GIFHNECI_01808 0.0 U Type IV secretory system Conjugative DNA transfer
GIFHNECI_01811 1.1e-100 K Helix-turn-helix domain protein
GIFHNECI_01813 2.3e-158
GIFHNECI_01814 3.6e-14 U Type IV secretory system Conjugative DNA transfer
GIFHNECI_01815 5.4e-205 isp2 3.2.1.96 M CHAP domain
GIFHNECI_01816 0.0 trsE U type IV secretory pathway VirB4
GIFHNECI_01817 1e-62 S PrgI family protein
GIFHNECI_01818 3.3e-139
GIFHNECI_01819 8.9e-26
GIFHNECI_01820 0.0 XK27_00515 D Cell surface antigen C-terminus
GIFHNECI_01821 1.5e-07
GIFHNECI_01822 2e-24
GIFHNECI_01823 3.4e-255 L Phage integrase family
GIFHNECI_01824 1.1e-49 relB L RelB antitoxin
GIFHNECI_01825 1.8e-68 T Toxic component of a toxin-antitoxin (TA) module
GIFHNECI_01826 2.4e-29 L IstB-like ATP binding protein
GIFHNECI_01827 1.2e-114 L Psort location Cytoplasmic, score 8.87
GIFHNECI_01828 1.3e-207 E Belongs to the peptidase S1B family
GIFHNECI_01829 2.2e-10
GIFHNECI_01830 1e-27
GIFHNECI_01831 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GIFHNECI_01832 1.7e-84 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
GIFHNECI_01833 1.4e-47 S Domain of unknown function (DUF4193)
GIFHNECI_01834 1.2e-173 S Protein of unknown function (DUF3071)
GIFHNECI_01835 6.5e-237 S Type I phosphodiesterase / nucleotide pyrophosphatase
GIFHNECI_01836 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
GIFHNECI_01837 0.0 lhr L DEAD DEAH box helicase
GIFHNECI_01838 1e-25 yozG K Cro/C1-type HTH DNA-binding domain
GIFHNECI_01839 9.3e-37 S Protein of unknown function (DUF2975)
GIFHNECI_01840 2.3e-278 aspA 4.3.1.1 E Fumarase C C-terminus
GIFHNECI_01841 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
GIFHNECI_01842 6.3e-181 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
GIFHNECI_01843 2.9e-122
GIFHNECI_01844 1.5e-200 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
GIFHNECI_01845 0.0 pknL 2.7.11.1 KLT PASTA
GIFHNECI_01846 1e-133 plsC2 2.3.1.51 I Phosphate acyltransferases
GIFHNECI_01847 1.5e-109
GIFHNECI_01848 7.9e-191 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
GIFHNECI_01849 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GIFHNECI_01850 6.7e-111 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GIFHNECI_01852 3.6e-27 marR5 K Winged helix DNA-binding domain
GIFHNECI_01853 7.1e-74 recX S Modulates RecA activity
GIFHNECI_01854 8e-216 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GIFHNECI_01855 3.7e-40 S Protein of unknown function (DUF3046)
GIFHNECI_01856 7.3e-81 K Helix-turn-helix XRE-family like proteins
GIFHNECI_01857 4.2e-95 cinA 3.5.1.42 S Belongs to the CinA family
GIFHNECI_01858 6.6e-122 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GIFHNECI_01859 0.0 ftsK D FtsK SpoIIIE family protein
GIFHNECI_01860 4.5e-137 fic D Fic/DOC family
GIFHNECI_01861 9e-185 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GIFHNECI_01862 2.1e-279 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
GIFHNECI_01863 3.2e-121 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
GIFHNECI_01864 3.7e-171 ydeD EG EamA-like transporter family
GIFHNECI_01865 6.6e-132 ybhL S Belongs to the BI1 family
GIFHNECI_01866 2.6e-96 S Domain of unknown function (DUF5067)
GIFHNECI_01867 7.8e-266 T Histidine kinase
GIFHNECI_01868 1.1e-116 K helix_turn_helix, Lux Regulon
GIFHNECI_01869 0.0 S Protein of unknown function DUF262
GIFHNECI_01870 2e-302 gmk 2.4.2.10, 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
GIFHNECI_01871 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
GIFHNECI_01872 1.2e-238 carA 6.3.5.5 F Belongs to the CarA family
GIFHNECI_01873 7.3e-89 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GIFHNECI_01874 7.4e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GIFHNECI_01876 1.2e-189 EGP Transmembrane secretion effector
GIFHNECI_01877 0.0 S Esterase-like activity of phytase
GIFHNECI_01878 8.1e-232 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GIFHNECI_01879 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GIFHNECI_01880 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
GIFHNECI_01881 2.1e-61 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GIFHNECI_01883 3.2e-197 ltaE 4.1.2.48 E Beta-eliminating lyase
GIFHNECI_01884 4.1e-228 M Glycosyl transferase 4-like domain
GIFHNECI_01885 0.0 M Parallel beta-helix repeats
GIFHNECI_01886 4.9e-235 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
GIFHNECI_01887 3.8e-139 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
GIFHNECI_01888 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
GIFHNECI_01889 1.2e-112
GIFHNECI_01890 3.8e-95 S Protein of unknown function (DUF4230)
GIFHNECI_01891 5.8e-149 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
GIFHNECI_01892 1.3e-31 K DNA-binding transcription factor activity
GIFHNECI_01893 1.2e-67 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GIFHNECI_01894 2e-32
GIFHNECI_01895 4e-303 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
GIFHNECI_01896 1.3e-292 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
GIFHNECI_01897 4.4e-186 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
GIFHNECI_01898 5e-240 purD 6.3.4.13 F Belongs to the GARS family
GIFHNECI_01899 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
GIFHNECI_01900 2.3e-246 S Putative esterase
GIFHNECI_01901 0.0 lysX S Uncharacterised conserved protein (DUF2156)
GIFHNECI_01903 2.3e-162 P Zinc-uptake complex component A periplasmic
GIFHNECI_01904 2e-135 S cobalamin synthesis protein
GIFHNECI_01905 8.8e-47 rpmB J Ribosomal L28 family
GIFHNECI_01906 7.5e-49 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GIFHNECI_01907 2.2e-41 rpmE2 J Ribosomal protein L31
GIFHNECI_01908 8.2e-15 rpmJ J Ribosomal protein L36
GIFHNECI_01909 2.3e-23 J Ribosomal L32p protein family
GIFHNECI_01910 6.2e-202 ycgR S Predicted permease
GIFHNECI_01911 2.6e-154 S TIGRFAM TIGR03943 family protein
GIFHNECI_01912 9.8e-45
GIFHNECI_01913 4.3e-73 zur P Belongs to the Fur family
GIFHNECI_01914 4e-228 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GIFHNECI_01915 4.7e-85 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
GIFHNECI_01916 8.5e-179 adh3 C Zinc-binding dehydrogenase
GIFHNECI_01917 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GIFHNECI_01919 4.1e-144 L IstB-like ATP binding protein
GIFHNECI_01920 2.7e-82 L PFAM Integrase catalytic
GIFHNECI_01921 5e-128 L PFAM Integrase catalytic
GIFHNECI_01922 1.4e-44 S Memo-like protein
GIFHNECI_01923 2.9e-229 K Putative ATP-dependent DNA helicase recG C-terminal
GIFHNECI_01924 3e-159 K Helix-turn-helix domain, rpiR family
GIFHNECI_01925 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
GIFHNECI_01926 2.3e-248 dgt 3.1.5.1 F Phosphohydrolase-associated domain
GIFHNECI_01927 2e-263 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GIFHNECI_01928 1.5e-269 yhdG E aromatic amino acid transport protein AroP K03293
GIFHNECI_01929 7.1e-94 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GIFHNECI_01930 1.2e-31 J Acetyltransferase (GNAT) domain
GIFHNECI_01931 2.3e-92 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
GIFHNECI_01932 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
GIFHNECI_01933 6.5e-218 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
GIFHNECI_01934 9.3e-189 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
GIFHNECI_01935 4.4e-109
GIFHNECI_01936 7.6e-15 S COG NOG14600 non supervised orthologous group
GIFHNECI_01937 4.6e-188 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GIFHNECI_01938 1.2e-155 sapF E ATPases associated with a variety of cellular activities
GIFHNECI_01939 4e-142 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
GIFHNECI_01940 2.9e-163 EP Binding-protein-dependent transport system inner membrane component
GIFHNECI_01941 1.6e-169 P Binding-protein-dependent transport system inner membrane component
GIFHNECI_01942 3e-309 E ABC transporter, substrate-binding protein, family 5
GIFHNECI_01943 3.6e-143 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
GIFHNECI_01944 7.5e-277 G Bacterial extracellular solute-binding protein
GIFHNECI_01945 1.8e-116 insK L Integrase core domain
GIFHNECI_01946 2.2e-59 L Helix-turn-helix domain
GIFHNECI_01947 1.5e-152 L Transposase and inactivated derivatives IS30 family
GIFHNECI_01948 5.8e-296 L PFAM Integrase catalytic
GIFHNECI_01949 4.1e-144 L IstB-like ATP binding protein
GIFHNECI_01950 1.7e-158 neo 2.7.1.87, 2.7.1.95 F Phosphotransferase enzyme family
GIFHNECI_01951 1.2e-112
GIFHNECI_01952 3.8e-95 S Protein of unknown function (DUF4230)
GIFHNECI_01953 1.8e-40 L IstB-like ATP binding protein
GIFHNECI_01954 2.8e-146 L PFAM Integrase catalytic
GIFHNECI_01955 3.1e-130 L IstB-like ATP binding protein
GIFHNECI_01956 8.2e-16 L IstB-like ATP binding protein

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)