ORF_ID e_value Gene_name EC_number CAZy COGs Description
GDCALCFG_00001 1e-147 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
GDCALCFG_00002 4.1e-52 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
GDCALCFG_00003 7e-75 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
GDCALCFG_00004 5.8e-152 rafG G ABC transporter permease
GDCALCFG_00005 4.2e-150 malC G Binding-protein-dependent transport system inner membrane component
GDCALCFG_00006 9e-11 K Psort location Cytoplasmic, score
GDCALCFG_00007 3.3e-30 K Psort location Cytoplasmic, score
GDCALCFG_00008 6.9e-72 K Psort location Cytoplasmic, score
GDCALCFG_00009 2e-76 amyE G Bacterial extracellular solute-binding protein
GDCALCFG_00010 4.8e-116 amyE G Bacterial extracellular solute-binding protein
GDCALCFG_00012 5.9e-229 M Protein of unknown function (DUF2961)
GDCALCFG_00013 2.9e-254 amyE G Bacterial extracellular solute-binding protein
GDCALCFG_00014 8.9e-187 K Periplasmic binding protein-like domain
GDCALCFG_00015 1.5e-266 amyE G Bacterial extracellular solute-binding protein
GDCALCFG_00016 5.6e-83 dps P Belongs to the Dps family
GDCALCFG_00017 2.7e-236 ytfL P Transporter associated domain
GDCALCFG_00018 2.6e-208 S AAA ATPase domain
GDCALCFG_00019 1.8e-119 cah 4.2.1.1 P Reversible hydration of carbon dioxide
GDCALCFG_00020 1e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
GDCALCFG_00021 0.0 trxB2 1.8.1.9 C Thioredoxin domain
GDCALCFG_00022 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
GDCALCFG_00023 2.1e-163
GDCALCFG_00024 3e-94 S Uncharacterised protein conserved in bacteria (DUF2194)
GDCALCFG_00025 3.2e-209 S Uncharacterised protein conserved in bacteria (DUF2194)
GDCALCFG_00026 1.2e-277 pelF GT4 M Domain of unknown function (DUF3492)
GDCALCFG_00027 3.8e-282 pelG S Putative exopolysaccharide Exporter (EPS-E)
GDCALCFG_00028 0.0 cotH M CotH kinase protein
GDCALCFG_00029 2.9e-156 P VTC domain
GDCALCFG_00030 3.2e-110 S Domain of unknown function (DUF4956)
GDCALCFG_00031 0.0 yliE T Putative diguanylate phosphodiesterase
GDCALCFG_00032 6.5e-125 S AAA domain
GDCALCFG_00033 2.1e-310 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
GDCALCFG_00034 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
GDCALCFG_00035 0.0 yjjP S Threonine/Serine exporter, ThrE
GDCALCFG_00036 6.1e-299 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GDCALCFG_00037 1.3e-166 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
GDCALCFG_00038 6.3e-288 S Amidohydrolase family
GDCALCFG_00039 5.5e-203 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
GDCALCFG_00040 3.4e-38 S Protein of unknown function (DUF3073)
GDCALCFG_00041 9.4e-113 K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
GDCALCFG_00042 4.9e-210 2.7.13.3 T Histidine kinase
GDCALCFG_00043 2.1e-223 EGP Major Facilitator Superfamily
GDCALCFG_00044 1.1e-71 I Sterol carrier protein
GDCALCFG_00045 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
GDCALCFG_00046 2.6e-35
GDCALCFG_00047 6.7e-120 gluP 3.4.21.105 S Rhomboid family
GDCALCFG_00048 2.6e-69 crgA D Involved in cell division
GDCALCFG_00049 1.8e-118 S Bacterial protein of unknown function (DUF881)
GDCALCFG_00050 6.6e-72 srtA 3.4.22.70 M Sortase family
GDCALCFG_00051 1.7e-142 srtA 3.4.22.70 M Sortase family
GDCALCFG_00052 4.5e-120 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
GDCALCFG_00053 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
GDCALCFG_00054 2.3e-173 T Protein tyrosine kinase
GDCALCFG_00055 2.8e-263 pbpA M penicillin-binding protein
GDCALCFG_00056 4.5e-278 rodA D Belongs to the SEDS family
GDCALCFG_00057 3.7e-272 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
GDCALCFG_00058 2.1e-75 fhaB T Inner membrane component of T3SS, cytoplasmic domain
GDCALCFG_00059 2e-129 fhaA T Protein of unknown function (DUF2662)
GDCALCFG_00060 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
GDCALCFG_00061 5.8e-213 pldB 3.1.1.5 I Serine aminopeptidase, S33
GDCALCFG_00062 3.4e-91 hsp20 O Hsp20/alpha crystallin family
GDCALCFG_00063 1.3e-176 yddG EG EamA-like transporter family
GDCALCFG_00064 3.7e-21
GDCALCFG_00065 2.2e-249 S Putative esterase
GDCALCFG_00066 0.0 lysX S Uncharacterised conserved protein (DUF2156)
GDCALCFG_00067 4.8e-201 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GDCALCFG_00068 4.4e-132 S Pyridoxamine 5'-phosphate oxidase
GDCALCFG_00069 3.6e-199 S Fic/DOC family
GDCALCFG_00070 2.3e-62 M Glycosyltransferase like family 2
GDCALCFG_00071 1e-70 M Glycosyltransferase like family 2
GDCALCFG_00072 0.0 KL Domain of unknown function (DUF3427)
GDCALCFG_00073 3.1e-74 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
GDCALCFG_00074 5.1e-51 ybjQ S Putative heavy-metal-binding
GDCALCFG_00075 8.5e-143 yplQ S Haemolysin-III related
GDCALCFG_00077 1e-259 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
GDCALCFG_00078 3.4e-203 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
GDCALCFG_00079 0.0 cadA P E1-E2 ATPase
GDCALCFG_00080 1.1e-275 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
GDCALCFG_00081 1.5e-172 htpX O Belongs to the peptidase M48B family
GDCALCFG_00083 5.2e-170 yicL EG EamA-like transporter family
GDCALCFG_00084 8.9e-198 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
GDCALCFG_00085 1e-253 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GDCALCFG_00086 2.2e-282 clcA P Voltage gated chloride channel
GDCALCFG_00087 1.3e-148 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GDCALCFG_00088 1.9e-57 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GDCALCFG_00089 7.2e-51 natB E Receptor family ligand binding region
GDCALCFG_00090 2.5e-135 K helix_turn _helix lactose operon repressor
GDCALCFG_00091 2.7e-52 K helix_turn _helix lactose operon repressor
GDCALCFG_00093 1.4e-300 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
GDCALCFG_00094 9.5e-152 scrT G Transporter major facilitator family protein
GDCALCFG_00095 2.7e-28 scrT G Transporter major facilitator family protein
GDCALCFG_00096 0.0 tetP J Elongation factor G, domain IV
GDCALCFG_00097 2.2e-142 Q Thiopurine S-methyltransferase (TPMT)
GDCALCFG_00098 3e-29
GDCALCFG_00099 1e-30 S Helix-turn-helix domain
GDCALCFG_00100 1.9e-68 S Bacterial mobilisation protein (MobC)
GDCALCFG_00101 0.0 D nuclear chromosome segregation
GDCALCFG_00102 1.1e-70 S Cysteine-rich VLP
GDCALCFG_00103 2.4e-161 repA K Replication initiator protein A (RepA) N-terminus
GDCALCFG_00104 4.3e-163 L DNA replication protein
GDCALCFG_00105 7.2e-26 S Transposon-encoded protein TnpW
GDCALCFG_00106 1.7e-131 L Domain of unknown function (DUF4368)
GDCALCFG_00107 1.8e-108 malF G Binding-protein-dependent transport system inner membrane component
GDCALCFG_00108 6.4e-232 malE G Bacterial extracellular solute-binding protein
GDCALCFG_00109 0.0 malL 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
GDCALCFG_00110 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
GDCALCFG_00111 3.6e-174 3.4.22.70 M Sortase family
GDCALCFG_00112 0.0 M domain protein
GDCALCFG_00113 0.0 M cell wall anchor domain protein
GDCALCFG_00114 1.2e-186 K Psort location Cytoplasmic, score
GDCALCFG_00115 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
GDCALCFG_00116 3.7e-204 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
GDCALCFG_00117 2.4e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
GDCALCFG_00118 1.4e-251 yhjE EGP Sugar (and other) transporter
GDCALCFG_00119 3.1e-179 K helix_turn _helix lactose operon repressor
GDCALCFG_00120 1.4e-57 scrT G Transporter major facilitator family protein
GDCALCFG_00121 1.3e-268 recD2 3.6.4.12 L PIF1-like helicase
GDCALCFG_00122 1.8e-121 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
GDCALCFG_00123 4.8e-293 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
GDCALCFG_00124 3e-213 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
GDCALCFG_00125 1.5e-118 ywlC 2.7.7.87 J Belongs to the SUA5 family
GDCALCFG_00126 6.6e-125 livF E ATPases associated with a variety of cellular activities
GDCALCFG_00127 1.4e-161 E Branched-chain amino acid ATP-binding cassette transporter
GDCALCFG_00128 7.7e-189 livM U Belongs to the binding-protein-dependent transport system permease family
GDCALCFG_00129 5.4e-111 U Belongs to the binding-protein-dependent transport system permease family
GDCALCFG_00130 1.8e-207 livK E Receptor family ligand binding region
GDCALCFG_00131 8.2e-165 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
GDCALCFG_00132 8.2e-191 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GDCALCFG_00133 1.3e-36 rpmE J Binds the 23S rRNA
GDCALCFG_00135 9.3e-32 EGP Major facilitator Superfamily
GDCALCFG_00136 5.4e-64 yebQ EGP Major facilitator Superfamily
GDCALCFG_00137 2.4e-147
GDCALCFG_00138 3.5e-73 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
GDCALCFG_00139 1.4e-166 dkgB S Oxidoreductase, aldo keto reductase family protein
GDCALCFG_00140 1.5e-18 lmrB U Major Facilitator Superfamily
GDCALCFG_00141 1.2e-86 K Winged helix DNA-binding domain
GDCALCFG_00142 5.3e-178 glkA 2.7.1.2 G ROK family
GDCALCFG_00144 6.1e-308 EGP Major Facilitator Superfamily
GDCALCFG_00145 0.0 yjjK S ATP-binding cassette protein, ChvD family
GDCALCFG_00146 2.5e-169 tesB I Thioesterase-like superfamily
GDCALCFG_00147 3.5e-86 S Protein of unknown function (DUF3180)
GDCALCFG_00148 8.5e-226 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
GDCALCFG_00149 1.3e-162 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
GDCALCFG_00150 2.8e-117 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
GDCALCFG_00151 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GDCALCFG_00152 2.7e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
GDCALCFG_00153 3.7e-210 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
GDCALCFG_00154 3.6e-253 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
GDCALCFG_00155 6.7e-301
GDCALCFG_00156 1.8e-190 natA V ATPases associated with a variety of cellular activities
GDCALCFG_00157 4.7e-235 epsG M Glycosyl transferase family 21
GDCALCFG_00158 4.7e-280 S AI-2E family transporter
GDCALCFG_00159 2.3e-178 3.4.14.13 M Glycosyltransferase like family 2
GDCALCFG_00160 5.2e-204 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
GDCALCFG_00161 4.3e-263 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
GDCALCFG_00164 1.3e-163 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
GDCALCFG_00167 5.6e-10 S Helix-turn-helix domain
GDCALCFG_00168 4.7e-206 S Helix-turn-helix domain
GDCALCFG_00169 1.3e-78 S Transcription factor WhiB
GDCALCFG_00170 4.8e-100 parA D AAA domain
GDCALCFG_00171 6.8e-40
GDCALCFG_00172 1.3e-282 S ATPases associated with a variety of cellular activities
GDCALCFG_00173 3.4e-94 K FR47-like protein
GDCALCFG_00174 3.8e-119 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
GDCALCFG_00175 0.0 XK27_00515 D Cell surface antigen C-terminus
GDCALCFG_00176 5e-22
GDCALCFG_00178 1.1e-36
GDCALCFG_00179 2.1e-146
GDCALCFG_00180 2.5e-41 S PrgI family protein
GDCALCFG_00181 0.0 trsE U type IV secretory pathway VirB4
GDCALCFG_00182 1.2e-198 isp2 3.2.1.96 M CHAP domain
GDCALCFG_00183 9.2e-149
GDCALCFG_00184 1.7e-45
GDCALCFG_00185 1.4e-147 L Psort location Cytoplasmic, score
GDCALCFG_00186 0.0 U Type IV secretory system Conjugative DNA transfer
GDCALCFG_00188 1.1e-53
GDCALCFG_00189 1.4e-200 ard S Antirestriction protein (ArdA)
GDCALCFG_00190 9.7e-104 S Protein of unknown function (DUF3801)
GDCALCFG_00191 4.6e-258 rlx U Relaxase/Mobilisation nuclease domain
GDCALCFG_00192 1.1e-68 S Bacterial mobilisation protein (MobC)
GDCALCFG_00193 2.7e-61
GDCALCFG_00194 3e-40
GDCALCFG_00195 4.9e-237 K ParB-like nuclease domain
GDCALCFG_00196 7.7e-106 S Domain of unknown function (DUF4192)
GDCALCFG_00197 4.4e-78 S Nucleotidyltransferase domain
GDCALCFG_00198 8e-182 L Phage integrase family
GDCALCFG_00200 9.4e-16 L Phage integrase family
GDCALCFG_00201 2.6e-12 sprF 4.6.1.1 M Cell surface antigen C-terminus
GDCALCFG_00202 1.9e-267 lacS G Psort location CytoplasmicMembrane, score 10.00
GDCALCFG_00203 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GDCALCFG_00204 4.8e-185 lacR K Transcriptional regulator, LacI family
GDCALCFG_00205 6.3e-22 L Helix-turn-helix domain
GDCALCFG_00206 4.2e-258 G Bacterial extracellular solute-binding protein
GDCALCFG_00207 9.1e-220 GK ROK family
GDCALCFG_00208 0.0 G Glycosyl hydrolase family 20, domain 2
GDCALCFG_00209 6.7e-08 L HTH-like domain
GDCALCFG_00210 1.5e-218 vex3 V ABC transporter permease
GDCALCFG_00211 2e-209 vex1 V Efflux ABC transporter, permease protein
GDCALCFG_00212 4.1e-110 vex2 V ABC transporter, ATP-binding protein
GDCALCFG_00213 1.4e-11 azlC E AzlC protein
GDCALCFG_00214 5.9e-97 ptpA 3.1.3.48 T low molecular weight
GDCALCFG_00215 2.3e-127 folA 1.5.1.3 H dihydrofolate reductase
GDCALCFG_00216 1e-167 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GDCALCFG_00217 3.4e-73 attW O OsmC-like protein
GDCALCFG_00218 1.5e-189 T Universal stress protein family
GDCALCFG_00219 1.1e-103 M NlpC/P60 family
GDCALCFG_00220 2.9e-99 M NlpC/P60 family
GDCALCFG_00221 7.8e-169 usp 3.5.1.28 CBM50 S CHAP domain
GDCALCFG_00222 2.1e-213 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
GDCALCFG_00223 1.8e-32
GDCALCFG_00224 6e-174 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GDCALCFG_00225 5.4e-116 phoU P Plays a role in the regulation of phosphate uptake
GDCALCFG_00226 2e-138 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GDCALCFG_00227 4.7e-174 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
GDCALCFG_00228 2.3e-311 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
GDCALCFG_00230 2.5e-217 araJ EGP Major facilitator Superfamily
GDCALCFG_00231 0.0 S Domain of unknown function (DUF4037)
GDCALCFG_00232 2.9e-116 S Protein of unknown function (DUF4125)
GDCALCFG_00233 0.0 S alpha beta
GDCALCFG_00234 1.9e-58
GDCALCFG_00235 1.6e-286 pspC KT PspC domain
GDCALCFG_00236 2.6e-236 tcsS3 KT PspC domain
GDCALCFG_00237 7.6e-118 degU K helix_turn_helix, Lux Regulon
GDCALCFG_00238 4.1e-168 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
GDCALCFG_00239 8.3e-204 mdsC 2.7.1.162, 2.7.1.39 S Phosphotransferase enzyme family
GDCALCFG_00240 0.0 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
GDCALCFG_00241 2.5e-167 G ABC transporter permease
GDCALCFG_00242 6.9e-173 malC G Binding-protein-dependent transport system inner membrane component
GDCALCFG_00243 5.2e-248 G Bacterial extracellular solute-binding protein
GDCALCFG_00245 1.1e-242 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GDCALCFG_00246 8.3e-181 I Diacylglycerol kinase catalytic domain
GDCALCFG_00247 5.9e-163 arbG K CAT RNA binding domain
GDCALCFG_00248 0.0 crr 2.7.1.193 G pts system, glucose-specific IIABC component
GDCALCFG_00249 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
GDCALCFG_00250 7.5e-197 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
GDCALCFG_00251 6.1e-73 K Transcriptional regulator
GDCALCFG_00252 4.6e-277 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GDCALCFG_00253 9.2e-174 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GDCALCFG_00254 9.1e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GDCALCFG_00256 1.6e-98
GDCALCFG_00257 3.9e-260 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GDCALCFG_00258 4.3e-219 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
GDCALCFG_00259 1.4e-220 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GDCALCFG_00260 4.8e-82 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GDCALCFG_00261 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GDCALCFG_00262 3.4e-186 nusA K Participates in both transcription termination and antitermination
GDCALCFG_00263 2.1e-126
GDCALCFG_00264 1.5e-101 K helix_turn _helix lactose operon repressor
GDCALCFG_00266 3.6e-151 E Transglutaminase/protease-like homologues
GDCALCFG_00267 0.0 gcs2 S A circularly permuted ATPgrasp
GDCALCFG_00268 8.7e-170 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
GDCALCFG_00269 4.4e-57 rplQ J Ribosomal protein L17
GDCALCFG_00270 3.4e-183 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GDCALCFG_00271 1.5e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GDCALCFG_00272 1.2e-61 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GDCALCFG_00273 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
GDCALCFG_00274 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GDCALCFG_00275 2.2e-99 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
GDCALCFG_00276 6.9e-248 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
GDCALCFG_00277 8.1e-76 rplO J binds to the 23S rRNA
GDCALCFG_00278 7e-26 rpmD J Ribosomal protein L30p/L7e
GDCALCFG_00279 3.3e-95 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GDCALCFG_00280 2.4e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GDCALCFG_00281 5.4e-95 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GDCALCFG_00282 2.1e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GDCALCFG_00283 9.2e-18 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GDCALCFG_00284 4.4e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GDCALCFG_00285 1.3e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GDCALCFG_00286 6.6e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GDCALCFG_00287 6.4e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GDCALCFG_00288 4.1e-37 rpmC J Belongs to the universal ribosomal protein uL29 family
GDCALCFG_00289 2.2e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GDCALCFG_00290 1.7e-100 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GDCALCFG_00291 5.7e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GDCALCFG_00292 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GDCALCFG_00293 1.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GDCALCFG_00294 7.5e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
GDCALCFG_00295 3.1e-116 rplD J Forms part of the polypeptide exit tunnel
GDCALCFG_00296 8.7e-116 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GDCALCFG_00297 8e-51 rpsJ J Involved in the binding of tRNA to the ribosomes
GDCALCFG_00298 8.2e-137 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
GDCALCFG_00299 9.5e-145 ywiC S YwiC-like protein
GDCALCFG_00300 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
GDCALCFG_00301 3.5e-224 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
GDCALCFG_00302 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
GDCALCFG_00304 3.7e-82 rpsI J Belongs to the universal ribosomal protein uS9 family
GDCALCFG_00305 3.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GDCALCFG_00306 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
GDCALCFG_00307 8.4e-117
GDCALCFG_00308 2.2e-111 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
GDCALCFG_00309 1.3e-182 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GDCALCFG_00310 3.2e-111 M Bacterial capsule synthesis protein PGA_cap
GDCALCFG_00311 6.3e-245 bglA 3.2.1.21 G Glycosyl hydrolase family 1
GDCALCFG_00312 6.1e-160 U Binding-protein-dependent transport system inner membrane component
GDCALCFG_00313 1.2e-163 malC U Binding-protein-dependent transport system inner membrane component
GDCALCFG_00314 4.9e-243 malE G Bacterial extracellular solute-binding protein
GDCALCFG_00315 1.4e-217 rbsR K helix_turn _helix lactose operon repressor
GDCALCFG_00316 5.2e-22
GDCALCFG_00318 9.1e-64 S EamA-like transporter family
GDCALCFG_00319 1e-21 S EamA-like transporter family
GDCALCFG_00320 4e-237 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GDCALCFG_00321 6.1e-224 dapC E Aminotransferase class I and II
GDCALCFG_00322 2.9e-59 fdxA C 4Fe-4S binding domain
GDCALCFG_00323 1.2e-269 E aromatic amino acid transport protein AroP K03293
GDCALCFG_00324 3.8e-221 murB 1.3.1.98 M Cell wall formation
GDCALCFG_00325 4.1e-25 rpmG J Ribosomal protein L33
GDCALCFG_00329 1.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GDCALCFG_00330 1.1e-135
GDCALCFG_00331 2.6e-85 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
GDCALCFG_00332 4.9e-56 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
GDCALCFG_00333 4.3e-31 fmdB S Putative regulatory protein
GDCALCFG_00334 3.6e-106 flgA NO SAF
GDCALCFG_00335 6.6e-19 L Superfamily I DNA and RNA helicases and helicase subunits
GDCALCFG_00336 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
GDCALCFG_00337 7.5e-191 T Forkhead associated domain
GDCALCFG_00338 9.3e-49 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
GDCALCFG_00339 2.4e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GDCALCFG_00340 1.7e-145 3.2.1.8 S alpha beta
GDCALCFG_00341 1.1e-251 pbuO S Permease family
GDCALCFG_00342 2.1e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GDCALCFG_00343 2.3e-171 pstA P Phosphate transport system permease
GDCALCFG_00344 1.2e-156 pstC P probably responsible for the translocation of the substrate across the membrane
GDCALCFG_00345 1.1e-201 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
GDCALCFG_00346 3.8e-142 KT Transcriptional regulatory protein, C terminal
GDCALCFG_00347 3.3e-207 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
GDCALCFG_00348 1.5e-239 EGP Sugar (and other) transporter
GDCALCFG_00349 6.3e-123 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GDCALCFG_00350 1.9e-236 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GDCALCFG_00351 4.1e-217 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GDCALCFG_00352 1e-267 pepC 3.4.22.40 E Peptidase C1-like family
GDCALCFG_00353 2.4e-44 D nuclear chromosome segregation
GDCALCFG_00354 1.7e-125 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GDCALCFG_00355 2.4e-150 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
GDCALCFG_00356 7.5e-197 yfiH Q Multi-copper polyphenol oxidoreductase laccase
GDCALCFG_00357 2e-299 yegQ O Peptidase family U32 C-terminal domain
GDCALCFG_00358 2.4e-178 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
GDCALCFG_00359 1.9e-101 rsmD 2.1.1.171 L Conserved hypothetical protein 95
GDCALCFG_00360 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
GDCALCFG_00361 2.5e-29 rpmB J Ribosomal L28 family
GDCALCFG_00362 3.2e-197 yegV G pfkB family carbohydrate kinase
GDCALCFG_00363 4.1e-237 yxiO S Vacuole effluxer Atg22 like
GDCALCFG_00364 6.3e-169 S permease
GDCALCFG_00365 1.4e-57 CO Thioredoxin domain
GDCALCFG_00366 1.5e-173 arsB P arsenical-resistance protein
GDCALCFG_00367 2.4e-174 K Helix-turn-helix XRE-family like proteins
GDCALCFG_00368 1.4e-20
GDCALCFG_00369 8.6e-116 S Alpha/beta hydrolase family
GDCALCFG_00373 9.4e-17 EGP Major facilitator Superfamily
GDCALCFG_00374 6.1e-45 XK27_04590 S NADPH-dependent FMN reductase
GDCALCFG_00376 4.5e-294 pccB I Carboxyl transferase domain
GDCALCFG_00377 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
GDCALCFG_00378 2.6e-90 bioY S BioY family
GDCALCFG_00379 3.2e-162 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
GDCALCFG_00380 0.0
GDCALCFG_00381 3.2e-164 QT PucR C-terminal helix-turn-helix domain
GDCALCFG_00382 2.7e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
GDCALCFG_00383 1e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GDCALCFG_00384 2.5e-146 K Psort location Cytoplasmic, score
GDCALCFG_00385 1.4e-110 nusG K Participates in transcription elongation, termination and antitermination
GDCALCFG_00386 5.6e-33 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
GDCALCFG_00388 1.7e-229 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
GDCALCFG_00389 8e-222 G polysaccharide deacetylase
GDCALCFG_00390 8.3e-199 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
GDCALCFG_00391 2.1e-310 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GDCALCFG_00392 5.8e-39 rpmA J Ribosomal L27 protein
GDCALCFG_00393 1.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
GDCALCFG_00394 0.0 rne 3.1.26.12 J Ribonuclease E/G family
GDCALCFG_00395 2.4e-231 dapE 3.5.1.18 E Peptidase dimerisation domain
GDCALCFG_00396 1.9e-167 mdcF S Transporter, auxin efflux carrier (AEC) family protein
GDCALCFG_00397 5.7e-166 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
GDCALCFG_00398 2.3e-147 S Amidohydrolase
GDCALCFG_00399 3.8e-200 fucP G Major Facilitator Superfamily
GDCALCFG_00400 2.8e-148 IQ KR domain
GDCALCFG_00401 1.2e-249 4.2.1.68 M Enolase C-terminal domain-like
GDCALCFG_00402 1.2e-191 K Bacterial regulatory proteins, lacI family
GDCALCFG_00403 1.8e-254 V Efflux ABC transporter, permease protein
GDCALCFG_00404 3.3e-138 V ATPases associated with a variety of cellular activities
GDCALCFG_00405 1.6e-28 S Protein of unknown function (DUF1778)
GDCALCFG_00406 2e-91 K Acetyltransferase (GNAT) family
GDCALCFG_00407 6.7e-273 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
GDCALCFG_00408 2.7e-184 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
GDCALCFG_00409 1.8e-237 hom 1.1.1.3 E Homoserine dehydrogenase
GDCALCFG_00410 5.6e-54 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
GDCALCFG_00411 3e-55 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GDCALCFG_00412 1.7e-301 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
GDCALCFG_00413 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
GDCALCFG_00414 8.1e-131 K Bacterial regulatory proteins, tetR family
GDCALCFG_00415 1.4e-221 G Transmembrane secretion effector
GDCALCFG_00416 6.8e-256 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GDCALCFG_00417 5.3e-256 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
GDCALCFG_00418 2.1e-157 ET Bacterial periplasmic substrate-binding proteins
GDCALCFG_00419 2.4e-119 ytmL P Binding-protein-dependent transport system inner membrane component
GDCALCFG_00420 1.2e-138 P Binding-protein-dependent transport system inner membrane component
GDCALCFG_00421 3e-104 S L-2-amino-thiazoline-4-carboxylic acid hydrolase
GDCALCFG_00422 1.1e-130 yxeO 3.6.3.21 E ATPases associated with a variety of cellular activities
GDCALCFG_00423 1.8e-220 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
GDCALCFG_00424 6.5e-22 2.7.13.3 T Histidine kinase
GDCALCFG_00425 4.9e-21 S Bacterial PH domain
GDCALCFG_00426 9.3e-132 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
GDCALCFG_00427 1.3e-273 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
GDCALCFG_00428 2.2e-140 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
GDCALCFG_00429 1.3e-262 S Calcineurin-like phosphoesterase
GDCALCFG_00430 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
GDCALCFG_00431 5e-233 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
GDCALCFG_00432 8.5e-132
GDCALCFG_00433 0.0 G N-terminal domain of (some) glycogen debranching enzymes
GDCALCFG_00434 1.6e-49 P Binding-protein-dependent transport system inner membrane component
GDCALCFG_00435 3.9e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GDCALCFG_00436 1.4e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GDCALCFG_00437 2.6e-216 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
GDCALCFG_00438 2.5e-216 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
GDCALCFG_00439 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GDCALCFG_00440 2.3e-162 S Auxin Efflux Carrier
GDCALCFG_00441 4e-158 fahA Q Fumarylacetoacetate (FAA) hydrolase family
GDCALCFG_00442 3.1e-109 S Domain of unknown function (DUF4190)
GDCALCFG_00443 3.9e-165
GDCALCFG_00444 1e-234 glf 5.4.99.9 M UDP-galactopyranose mutase
GDCALCFG_00445 2.3e-46 5.3.1.27 G sugar phosphate isomerase involved in capsule formation
GDCALCFG_00446 6.4e-58 G Branched-chain amino acid transport system / permease component
GDCALCFG_00447 1.5e-72 P branched-chain amino acid ABC transporter, permease protein
GDCALCFG_00448 6.3e-120 G ATPases associated with a variety of cellular activities
GDCALCFG_00449 3e-81 G ABC-type sugar transport system periplasmic component
GDCALCFG_00450 3e-167 xylB 1.1.1.57, 2.7.1.17 G Belongs to the FGGY kinase family
GDCALCFG_00451 1e-75 xylR GK ROK family
GDCALCFG_00452 3.3e-36
GDCALCFG_00453 5.4e-200 M Glycosyltransferase like family 2
GDCALCFG_00454 2.1e-244 S Predicted membrane protein (DUF2142)
GDCALCFG_00455 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
GDCALCFG_00456 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
GDCALCFG_00457 2.2e-287 lsgC M transferase activity, transferring glycosyl groups
GDCALCFG_00458 1.3e-235 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
GDCALCFG_00459 7.4e-144 rgpC U Transport permease protein
GDCALCFG_00460 0.0 rgpF M Rhamnan synthesis protein F
GDCALCFG_00461 4.4e-183 M Glycosyltransferase like family 2
GDCALCFG_00462 1.7e-170 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
GDCALCFG_00463 4.6e-290 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
GDCALCFG_00464 5.9e-207 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
GDCALCFG_00465 0.0
GDCALCFG_00466 1.6e-174 rfbJ M Glycosyl transferase family 2
GDCALCFG_00467 1.1e-195 lytC 3.1.4.46, 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
GDCALCFG_00468 2.3e-230 K Cell envelope-related transcriptional attenuator domain
GDCALCFG_00469 1.7e-255 V ABC transporter permease
GDCALCFG_00470 9.5e-185 V ABC transporter
GDCALCFG_00471 1.2e-143 T HD domain
GDCALCFG_00472 4.6e-160 S Glutamine amidotransferase domain
GDCALCFG_00473 0.0 kup P Transport of potassium into the cell
GDCALCFG_00474 5.3e-186 tatD L TatD related DNase
GDCALCFG_00475 0.0 yknV V ABC transporter
GDCALCFG_00476 0.0 mdlA2 V ABC transporter
GDCALCFG_00477 9.1e-253 S Domain of unknown function (DUF4143)
GDCALCFG_00478 8e-195 G Glycosyl hydrolases family 43
GDCALCFG_00479 1.9e-153 U Binding-protein-dependent transport system inner membrane component
GDCALCFG_00480 5.9e-177 U Binding-protein-dependent transport system inner membrane component
GDCALCFG_00481 3.1e-242 G Bacterial extracellular solute-binding protein
GDCALCFG_00482 3.4e-194 K helix_turn _helix lactose operon repressor
GDCALCFG_00483 0.0 lacZ 3.2.1.23 G Beta-galactosidase trimerisation domain
GDCALCFG_00484 1.6e-268 S AAA domain
GDCALCFG_00485 3.1e-54 EGP Major facilitator Superfamily
GDCALCFG_00486 4e-34 EGP Major facilitator Superfamily
GDCALCFG_00487 5.7e-21 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
GDCALCFG_00488 0.0 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
GDCALCFG_00489 0.0 oppD P Belongs to the ABC transporter superfamily
GDCALCFG_00490 3.2e-173 dppC EP N-terminal TM domain of oligopeptide transport permease C
GDCALCFG_00491 3.9e-176 appB EP Binding-protein-dependent transport system inner membrane component
GDCALCFG_00492 1.7e-279 pepC 3.4.22.40 E Peptidase C1-like family
GDCALCFG_00493 1e-47
GDCALCFG_00494 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GDCALCFG_00495 9.4e-121
GDCALCFG_00496 6.5e-182 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GDCALCFG_00498 1.1e-256 G MFS/sugar transport protein
GDCALCFG_00499 6.2e-179 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GDCALCFG_00500 0.0 lmrA2 V ABC transporter transmembrane region
GDCALCFG_00501 0.0 lmrA1 V ABC transporter, ATP-binding protein
GDCALCFG_00502 3.9e-90 ydgJ K helix_turn_helix multiple antibiotic resistance protein
GDCALCFG_00503 1.9e-278 cycA E Amino acid permease
GDCALCFG_00504 0.0 V FtsX-like permease family
GDCALCFG_00505 8.9e-130 V ABC transporter
GDCALCFG_00506 7e-270 aroP E aromatic amino acid transport protein AroP K03293
GDCALCFG_00507 2.2e-105 S Protein of unknown function, DUF624
GDCALCFG_00508 6.8e-153 rafG G ABC transporter permease
GDCALCFG_00509 4.4e-147 malC G Binding-protein-dependent transport system inner membrane component
GDCALCFG_00510 3.7e-185 K Psort location Cytoplasmic, score
GDCALCFG_00511 9.2e-253 amyE G Bacterial extracellular solute-binding protein
GDCALCFG_00512 3.6e-102 G Phosphoglycerate mutase family
GDCALCFG_00513 4.4e-59 S Protein of unknown function (DUF4235)
GDCALCFG_00514 4.2e-141 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
GDCALCFG_00515 0.0 pip S YhgE Pip domain protein
GDCALCFG_00516 3.5e-279 pip S YhgE Pip domain protein
GDCALCFG_00517 1.8e-40
GDCALCFG_00518 1.5e-186 K Periplasmic binding protein domain
GDCALCFG_00519 1.8e-141 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
GDCALCFG_00520 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
GDCALCFG_00521 1.4e-150 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
GDCALCFG_00522 1.6e-153 yecS E Binding-protein-dependent transport system inner membrane component
GDCALCFG_00523 4.9e-168 pknD ET ABC transporter, substrate-binding protein, family 3
GDCALCFG_00524 6.1e-142 pknD ET ABC transporter, substrate-binding protein, family 3
GDCALCFG_00525 6.3e-79 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
GDCALCFG_00526 4e-147 usp 3.5.1.28 CBM50 D CHAP domain protein
GDCALCFG_00527 9.8e-161 ftsX D Part of the ABC transporter FtsEX involved in cellular division
GDCALCFG_00528 1.3e-205 ftsE D Cell division ATP-binding protein FtsE
GDCALCFG_00529 1.6e-205 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
GDCALCFG_00530 6.5e-268 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
GDCALCFG_00531 7.5e-123 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GDCALCFG_00532 2.6e-258 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GDCALCFG_00533 4.7e-58 S Sulfite exporter TauE/SafE
GDCALCFG_00534 5.3e-47 K PFAM helix-turn-helix- domain containing protein, AraC type
GDCALCFG_00535 2.1e-131 bglA 3.2.1.21 G Glycosyl hydrolase family 1
GDCALCFG_00536 8.2e-118 P Binding-protein-dependent transport system inner membrane component
GDCALCFG_00537 4.1e-108 malC P Binding-protein-dependent transport system inner membrane component
GDCALCFG_00538 1.2e-106 G Bacterial extracellular solute-binding protein
GDCALCFG_00539 3.4e-11 S Sulfite exporter TauE/SafE
GDCALCFG_00540 5.6e-52 S Sulfite exporter TauE/SafE
GDCALCFG_00541 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
GDCALCFG_00542 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GDCALCFG_00543 1.7e-162 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GDCALCFG_00544 1.9e-133 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
GDCALCFG_00545 3.3e-234 G Major Facilitator Superfamily
GDCALCFG_00546 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
GDCALCFG_00547 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
GDCALCFG_00548 3e-220 KLT Protein tyrosine kinase
GDCALCFG_00549 0.0 S Fibronectin type 3 domain
GDCALCFG_00550 2.5e-239 S Protein of unknown function DUF58
GDCALCFG_00551 0.0 E Transglutaminase-like superfamily
GDCALCFG_00552 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GDCALCFG_00553 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GDCALCFG_00554 7.2e-101
GDCALCFG_00555 3.7e-187 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
GDCALCFG_00556 7.6e-115 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
GDCALCFG_00557 3.2e-253 S UPF0210 protein
GDCALCFG_00558 6.4e-44 gcvR T Belongs to the UPF0237 family
GDCALCFG_00559 2e-233 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
GDCALCFG_00560 1.9e-252 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
GDCALCFG_00561 8.2e-123 glpR K DeoR C terminal sensor domain
GDCALCFG_00562 4.1e-225 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
GDCALCFG_00563 1.3e-230 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
GDCALCFG_00564 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
GDCALCFG_00565 2.1e-134 glxR K helix_turn_helix, cAMP Regulatory protein
GDCALCFG_00566 8.4e-218 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
GDCALCFG_00567 4.9e-193 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
GDCALCFG_00568 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
GDCALCFG_00569 5.5e-225 S Uncharacterized conserved protein (DUF2183)
GDCALCFG_00570 5.9e-70 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
GDCALCFG_00571 2.2e-211 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
GDCALCFG_00572 5.4e-158 mhpC I Alpha/beta hydrolase family
GDCALCFG_00573 1.6e-120 F Domain of unknown function (DUF4916)
GDCALCFG_00574 1.9e-59 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
GDCALCFG_00575 8.8e-160 S G5
GDCALCFG_00576 1.2e-162
GDCALCFG_00577 1.9e-235 wcoI DM Psort location CytoplasmicMembrane, score
GDCALCFG_00578 3.2e-69
GDCALCFG_00579 5.6e-261 S Psort location CytoplasmicMembrane, score 9.99
GDCALCFG_00580 1e-10 L Helix-turn-helix domain
GDCALCFG_00581 6.7e-21 S enterobacterial common antigen metabolic process
GDCALCFG_00582 4.3e-186 S AAA domain, putative AbiEii toxin, Type IV TA system
GDCALCFG_00583 1.6e-80 S RloB-like protein
GDCALCFG_00585 6e-27 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
GDCALCFG_00586 1.1e-47 V Abi-like protein
GDCALCFG_00588 7e-46 murG 2.4.1.227 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GDCALCFG_00589 3.4e-28 K NB-ARC domain
GDCALCFG_00590 1.4e-08 L Transposase and inactivated derivatives IS30 family
GDCALCFG_00591 8.4e-96 S GtrA-like protein
GDCALCFG_00592 3.3e-61 S Macrophage migration inhibitory factor (MIF)
GDCALCFG_00593 4.8e-290 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
GDCALCFG_00594 0.0 pepD E Peptidase family C69
GDCALCFG_00595 2.7e-108 S Phosphatidylethanolamine-binding protein
GDCALCFG_00596 1.1e-292 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GDCALCFG_00598 3.3e-37 ptsH G PTS HPr component phosphorylation site
GDCALCFG_00599 2.3e-105 K helix_turn _helix lactose operon repressor
GDCALCFG_00600 7.8e-208 holB 2.7.7.7 L DNA polymerase III
GDCALCFG_00601 4.8e-117 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GDCALCFG_00602 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GDCALCFG_00603 1.2e-165 3.6.1.27 I PAP2 superfamily
GDCALCFG_00604 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
GDCALCFG_00605 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GDCALCFG_00606 1.8e-270 S Calcineurin-like phosphoesterase
GDCALCFG_00607 9e-153 K FCD
GDCALCFG_00608 2.6e-244 P Domain of unknown function (DUF4143)
GDCALCFG_00609 0.0 nanI 3.2.1.18 GH33 G BNR repeat-like domain
GDCALCFG_00610 9.1e-14 nagA 3.5.1.25 G Amidohydrolase family
GDCALCFG_00611 3.7e-148 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GDCALCFG_00612 2e-180 nanL 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
GDCALCFG_00613 1.7e-148 oppF E ATPases associated with a variety of cellular activities
GDCALCFG_00614 0.0 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
GDCALCFG_00615 4.6e-153 oppB6 EP Binding-protein-dependent transport system inner membrane component
GDCALCFG_00616 2.7e-304 E Bacterial extracellular solute-binding proteins, family 5 Middle
GDCALCFG_00617 3e-161 3.5.1.106 I carboxylic ester hydrolase activity
GDCALCFG_00618 1.3e-125 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
GDCALCFG_00619 6.3e-169 2.7.1.2 GK ROK family
GDCALCFG_00620 3.8e-173 L Domain of unknown function (DUF4862)
GDCALCFG_00621 9.6e-112
GDCALCFG_00622 2.9e-212 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GDCALCFG_00623 1.3e-23 L PFAM Integrase catalytic
GDCALCFG_00624 6.6e-31
GDCALCFG_00626 6.1e-10
GDCALCFG_00629 7.5e-123 O AAA domain (Cdc48 subfamily)
GDCALCFG_00630 7e-67
GDCALCFG_00632 9.5e-54 L Phage integrase, N-terminal SAM-like domain
GDCALCFG_00633 2.8e-301 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
GDCALCFG_00634 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
GDCALCFG_00635 1.7e-262 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GDCALCFG_00636 6.5e-66 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
GDCALCFG_00637 2.7e-134 3.1.3.85 G Phosphoglycerate mutase family
GDCALCFG_00640 5.6e-158 S Sucrose-6F-phosphate phosphohydrolase
GDCALCFG_00641 1.8e-176 metQ P NLPA lipoprotein
GDCALCFG_00642 3.2e-220 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GDCALCFG_00643 7.4e-113 metI P Binding-protein-dependent transport system inner membrane component
GDCALCFG_00644 1.1e-225 S Peptidase dimerisation domain
GDCALCFG_00645 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GDCALCFG_00646 2.6e-38
GDCALCFG_00647 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
GDCALCFG_00648 8.7e-175 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GDCALCFG_00649 2.3e-121 S Protein of unknown function (DUF3000)
GDCALCFG_00650 6.2e-254 rnd 3.1.13.5 J 3'-5' exonuclease
GDCALCFG_00651 4.4e-234 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
GDCALCFG_00652 4.1e-243 clcA_2 P Voltage gated chloride channel
GDCALCFG_00653 8.9e-60
GDCALCFG_00654 6.5e-116 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GDCALCFG_00655 1.2e-120 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GDCALCFG_00656 5.2e-251 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GDCALCFG_00659 1.5e-241 patB 4.4.1.8 E Aminotransferase, class I II
GDCALCFG_00660 1.3e-238 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
GDCALCFG_00661 3.6e-168 fmt2 3.2.2.10 S Belongs to the LOG family
GDCALCFG_00662 1.9e-113 safC S O-methyltransferase
GDCALCFG_00663 4.2e-183 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
GDCALCFG_00664 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
GDCALCFG_00665 0.0 dprA 5.99.1.2 LU DNA recombination-mediator protein A
GDCALCFG_00666 3.4e-291 comM O Magnesium chelatase, subunit ChlI C-terminal
GDCALCFG_00667 2.2e-75 yraN L Belongs to the UPF0102 family
GDCALCFG_00668 1.6e-23 L Transposase and inactivated derivatives IS30 family
GDCALCFG_00669 2.8e-165 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
GDCALCFG_00670 1.7e-251 metY 2.5.1.49 E Aminotransferase class-V
GDCALCFG_00671 5.7e-169 V ABC transporter, ATP-binding protein
GDCALCFG_00672 0.0 MV MacB-like periplasmic core domain
GDCALCFG_00673 1.3e-140 K helix_turn_helix, Lux Regulon
GDCALCFG_00674 0.0 tcsS2 T Histidine kinase
GDCALCFG_00675 4.1e-294 pip 3.4.11.5 S alpha/beta hydrolase fold
GDCALCFG_00676 1.4e-147 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GDCALCFG_00677 1.1e-153 cjaA ET Bacterial periplasmic substrate-binding proteins
GDCALCFG_00678 2.6e-138 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
GDCALCFG_00679 1.2e-118 E Binding-protein-dependent transport system inner membrane component
GDCALCFG_00680 6.7e-111 papP E Binding-protein-dependent transport system inner membrane component
GDCALCFG_00681 1.7e-203 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
GDCALCFG_00682 1.4e-164 K Arac family
GDCALCFG_00683 2.7e-28 S rRNA binding
GDCALCFG_00685 2.7e-247 V MatE
GDCALCFG_00686 7.9e-140 drrC L ABC transporter
GDCALCFG_00687 3e-262 drrC L ABC transporter
GDCALCFG_00688 4e-26 2.7.7.7 L Transposase, Mutator family
GDCALCFG_00689 7e-234 XK27_00240 K Fic/DOC family
GDCALCFG_00690 3.1e-60 yccF S Inner membrane component domain
GDCALCFG_00691 1.3e-159 ksgA 2.1.1.182 J Methyltransferase domain
GDCALCFG_00692 2.5e-67 S Cupin 2, conserved barrel domain protein
GDCALCFG_00693 1.5e-52 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
GDCALCFG_00694 1.1e-37 L RelB antitoxin
GDCALCFG_00695 1.3e-243 S HipA-like C-terminal domain
GDCALCFG_00696 2.4e-17 K addiction module antidote protein HigA
GDCALCFG_00697 5.7e-220 G Transmembrane secretion effector
GDCALCFG_00698 4.9e-120 K Bacterial regulatory proteins, tetR family
GDCALCFG_00699 3.9e-221 int L Phage integrase, N-terminal SAM-like domain
GDCALCFG_00700 8.7e-146 polC_1 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
GDCALCFG_00701 7.1e-43
GDCALCFG_00702 2.2e-18
GDCALCFG_00703 1.9e-23
GDCALCFG_00712 2.6e-49 ssb1 L Single-stranded DNA-binding protein
GDCALCFG_00713 5.4e-08
GDCALCFG_00714 1.5e-11
GDCALCFG_00715 4.4e-33 V HNH endonuclease
GDCALCFG_00716 6.8e-44 A 3'-to-5' exoribonuclease specific for small oligoribonucleotides
GDCALCFG_00717 6.9e-41 S Protein of unknwon function (DUF3310)
GDCALCFG_00722 8.8e-08
GDCALCFG_00725 1.1e-08 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
GDCALCFG_00728 6.2e-21
GDCALCFG_00730 1.2e-34 L HNH endonuclease
GDCALCFG_00731 3.9e-07
GDCALCFG_00732 5.6e-240 S Terminase
GDCALCFG_00733 2.2e-181 S Phage portal protein, SPP1 Gp6-like
GDCALCFG_00734 1.8e-167
GDCALCFG_00735 1.6e-22
GDCALCFG_00736 6e-147 V Phage capsid family
GDCALCFG_00738 5.1e-46 S Phage protein Gp19/Gp15/Gp42
GDCALCFG_00739 1.2e-31
GDCALCFG_00740 8.9e-09
GDCALCFG_00741 2.3e-20
GDCALCFG_00742 1.3e-60 eae N domain, Protein
GDCALCFG_00743 2.9e-27
GDCALCFG_00744 6.4e-29
GDCALCFG_00745 5.5e-83 NT phage tail tape measure protein
GDCALCFG_00746 1.3e-65 S phage tail
GDCALCFG_00747 7.1e-226 S Prophage endopeptidase tail
GDCALCFG_00750 2.5e-39
GDCALCFG_00751 4.6e-134
GDCALCFG_00752 5.3e-85 L reverse transcriptase
GDCALCFG_00754 9.4e-18
GDCALCFG_00755 2.4e-106 M Glycosyl hydrolases family 25
GDCALCFG_00756 5.7e-29 S Putative phage holin Dp-1
GDCALCFG_00757 5.9e-12
GDCALCFG_00758 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
GDCALCFG_00759 1.2e-13 EGP Transmembrane secretion effector
GDCALCFG_00760 7.1e-292 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
GDCALCFG_00761 2.8e-243 nagA 3.5.1.25 G Amidohydrolase family
GDCALCFG_00762 1.9e-147 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GDCALCFG_00763 1.1e-175 2.7.1.2 GK ROK family
GDCALCFG_00764 3.1e-220 GK ROK family
GDCALCFG_00765 5.4e-158 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
GDCALCFG_00766 7.5e-253 gtr U Sugar (and other) transporter
GDCALCFG_00767 0.0 P Domain of unknown function (DUF4976)
GDCALCFG_00768 4e-272 aslB C Iron-sulfur cluster-binding domain
GDCALCFG_00769 1.6e-106 S Sulfite exporter TauE/SafE
GDCALCFG_00770 2.2e-27 L Helix-turn-helix domain
GDCALCFG_00771 2.4e-91 S Sulfite exporter TauE/SafE
GDCALCFG_00772 1.7e-63 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GDCALCFG_00774 4.3e-237 EGP Major facilitator Superfamily
GDCALCFG_00775 1.1e-106 3.1.3.27 E haloacid dehalogenase-like hydrolase
GDCALCFG_00776 1.4e-161 3.1.3.73 G Phosphoglycerate mutase family
GDCALCFG_00777 8.4e-235 rutG F Permease family
GDCALCFG_00778 8.4e-306 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
GDCALCFG_00779 9.2e-258 nplT G Alpha amylase, catalytic domain
GDCALCFG_00780 9.8e-189 pit P Phosphate transporter family
GDCALCFG_00781 3.3e-112 MA20_27875 P Protein of unknown function DUF47
GDCALCFG_00782 8.3e-114 K helix_turn_helix, Lux Regulon
GDCALCFG_00783 5.7e-242 T Histidine kinase
GDCALCFG_00784 2.5e-119 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
GDCALCFG_00785 1.1e-186 V ATPases associated with a variety of cellular activities
GDCALCFG_00786 7.5e-225 V ABC-2 family transporter protein
GDCALCFG_00787 4.6e-250 V ABC-2 family transporter protein
GDCALCFG_00788 1.6e-71 E GDSL-like Lipase/Acylhydrolase family
GDCALCFG_00789 4.7e-24 E GDSL-like Lipase/Acylhydrolase family
GDCALCFG_00790 4.9e-103
GDCALCFG_00791 9.2e-194
GDCALCFG_00792 1.1e-110 3.4.13.21 E Peptidase family S51
GDCALCFG_00793 3.5e-106 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
GDCALCFG_00794 2.1e-163 M pfam nlp p60
GDCALCFG_00795 4.8e-159 I Serine aminopeptidase, S33
GDCALCFG_00796 1.1e-40 S Protein of unknown function (DUF2975)
GDCALCFG_00797 2.8e-31 yozG K Cro/C1-type HTH DNA-binding domain
GDCALCFG_00798 1.5e-242 pbuX F Permease family
GDCALCFG_00799 4.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
GDCALCFG_00800 0.0 pcrA 3.6.4.12 L DNA helicase
GDCALCFG_00801 3.4e-62 S Domain of unknown function (DUF4418)
GDCALCFG_00802 1.3e-216 V FtsX-like permease family
GDCALCFG_00803 7.4e-161 lolD V ABC transporter
GDCALCFG_00804 1.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GDCALCFG_00805 1.8e-155 S Peptidase C26
GDCALCFG_00806 2.5e-91 3.5.4.5 F cytidine deaminase activity
GDCALCFG_00807 1.8e-46 sdpI S SdpI/YhfL protein family
GDCALCFG_00808 1.2e-111 E Transglutaminase-like superfamily
GDCALCFG_00809 7.1e-67 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
GDCALCFG_00810 1.2e-48 relB L RelB antitoxin
GDCALCFG_00811 1.9e-129 pgm3 G Phosphoglycerate mutase family
GDCALCFG_00812 2.4e-55 WQ51_05790 S Bacterial protein of unknown function (DUF948)
GDCALCFG_00813 1.6e-35
GDCALCFG_00814 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GDCALCFG_00815 2.7e-71 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GDCALCFG_00816 1.2e-195 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GDCALCFG_00817 5.3e-70 3.4.23.43 S Type IV leader peptidase family
GDCALCFG_00818 2.3e-218 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
GDCALCFG_00819 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
GDCALCFG_00820 3.5e-79 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
GDCALCFG_00821 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
GDCALCFG_00822 0.0 S L,D-transpeptidase catalytic domain
GDCALCFG_00823 1.5e-291 sufB O FeS assembly protein SufB
GDCALCFG_00824 5.2e-234 sufD O FeS assembly protein SufD
GDCALCFG_00825 7e-144 sufC O FeS assembly ATPase SufC
GDCALCFG_00826 1.1e-239 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GDCALCFG_00827 8.1e-102 iscU C SUF system FeS assembly protein, NifU family
GDCALCFG_00828 3.2e-109 yitW S Iron-sulfur cluster assembly protein
GDCALCFG_00829 6.2e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
GDCALCFG_00830 3.3e-166 spoU 2.1.1.185 J SpoU rRNA Methylase family
GDCALCFG_00832 3e-134 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
GDCALCFG_00833 4.4e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
GDCALCFG_00834 2.5e-217 phoH T PhoH-like protein
GDCALCFG_00835 1.2e-100 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GDCALCFG_00836 4.4e-96 corC S CBS domain
GDCALCFG_00837 1.9e-136 corC S CBS domain
GDCALCFG_00838 1.6e-185 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GDCALCFG_00839 0.0 fadD 6.2.1.3 I AMP-binding enzyme
GDCALCFG_00840 4.8e-205 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
GDCALCFG_00841 2.1e-43 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
GDCALCFG_00842 5.1e-233 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
GDCALCFG_00843 1.4e-234 yhjX EGP Major facilitator Superfamily
GDCALCFG_00844 1.7e-103 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
GDCALCFG_00845 1.6e-226 ilvE 2.6.1.42 E Amino-transferase class IV
GDCALCFG_00846 2.9e-146 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
GDCALCFG_00847 3.3e-138 S UPF0126 domain
GDCALCFG_00848 5.8e-34 rpsT J Binds directly to 16S ribosomal RNA
GDCALCFG_00849 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
GDCALCFG_00850 1.7e-254 hemN H Involved in the biosynthesis of porphyrin-containing compound
GDCALCFG_00852 1e-190 K helix_turn _helix lactose operon repressor
GDCALCFG_00853 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
GDCALCFG_00854 8.9e-300 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
GDCALCFG_00855 3.5e-94 E ABC transporter, substrate-binding protein, family 5
GDCALCFG_00856 8.6e-184 E ABC transporter, substrate-binding protein, family 5
GDCALCFG_00857 0.0 S Glycosyl hydrolases related to GH101 family, GH129
GDCALCFG_00858 3.9e-81
GDCALCFG_00859 2.1e-243 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
GDCALCFG_00860 1.4e-158 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
GDCALCFG_00861 9e-161 S Sucrose-6F-phosphate phosphohydrolase
GDCALCFG_00862 1.3e-105 bcp 1.11.1.15 O Redoxin
GDCALCFG_00863 3.4e-141
GDCALCFG_00865 3.9e-96 L Transposase and inactivated derivatives IS30 family
GDCALCFG_00866 2.3e-10 L Transposase and inactivated derivatives IS30 family
GDCALCFG_00867 1.3e-13 relB L RelB antitoxin
GDCALCFG_00868 1.8e-115 2.1.1.72, 3.1.21.3, 3.1.21.4 L N-6 DNA methylase
GDCALCFG_00869 2.3e-46 2.1.1.72, 3.1.21.3, 3.1.21.4 L N-6 DNA methylase
GDCALCFG_00870 6.8e-87 S AAA domain
GDCALCFG_00871 2.5e-60 2.7.11.1 KLT Protein tyrosine kinase
GDCALCFG_00873 3.5e-78 S Putative inner membrane protein (DUF1819)
GDCALCFG_00874 1.6e-81 S Domain of unknown function (DUF1788)
GDCALCFG_00875 0.0 FbpA 3.1.21.3, 3.2.1.170 GH38 K RNA-binding protein homologous to eukaryotic snRNP
GDCALCFG_00876 0.0 LV DNA restriction-modification system
GDCALCFG_00877 1.1e-26
GDCALCFG_00878 1.4e-81 J tRNA cytidylyltransferase activity
GDCALCFG_00879 1.3e-21 lexA 3.6.4.12 K Putative DNA-binding domain
GDCALCFG_00880 0.0 thiN 2.7.6.2 H PglZ domain
GDCALCFG_00881 0.0 3.4.21.53 O Putative ATP-dependent Lon protease
GDCALCFG_00882 4.6e-70 S TIR domain
GDCALCFG_00884 2.6e-28 S zinc finger
GDCALCFG_00886 9.8e-33 rarD S EamA-like transporter family
GDCALCFG_00887 7.1e-126 S Plasmid pRiA4b ORF-3-like protein
GDCALCFG_00888 2.6e-154 CP_1020 S zinc ion binding
GDCALCFG_00889 1.3e-19 CP_1020 S zinc ion binding
GDCALCFG_00890 5.2e-178 I alpha/beta hydrolase fold
GDCALCFG_00891 5.9e-91 S Appr-1'-p processing enzyme
GDCALCFG_00892 1.9e-146 S phosphoesterase or phosphohydrolase
GDCALCFG_00893 2.6e-140 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
GDCALCFG_00895 3e-133 S Phospholipase/Carboxylesterase
GDCALCFG_00896 7.8e-202 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
GDCALCFG_00897 2.4e-98 sixA 3.6.1.55 T Phosphoglycerate mutase family
GDCALCFG_00899 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GDCALCFG_00900 1.6e-162 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
GDCALCFG_00901 1.7e-187 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GDCALCFG_00902 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
GDCALCFG_00903 8.3e-179 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
GDCALCFG_00904 7e-74 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
GDCALCFG_00905 3.3e-291 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
GDCALCFG_00906 9.4e-175 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
GDCALCFG_00907 6.9e-158 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
GDCALCFG_00908 3.1e-181 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
GDCALCFG_00909 5e-125 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GDCALCFG_00910 9e-29
GDCALCFG_00911 2.4e-217 MA20_36090 S Psort location Cytoplasmic, score 8.87
GDCALCFG_00912 9.4e-172 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
GDCALCFG_00913 9.4e-123 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GDCALCFG_00914 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GDCALCFG_00915 3.7e-301 ybiT S ABC transporter
GDCALCFG_00916 4e-130 S Enoyl-(Acyl carrier protein) reductase
GDCALCFG_00917 5.2e-56 P ABC transporter
GDCALCFG_00918 2.2e-59 P ABC transporter
GDCALCFG_00919 1e-49 XK26_04485 P Cobalt transport protein
GDCALCFG_00920 3.4e-33 XK26_04485 P Cobalt transport protein
GDCALCFG_00921 5e-234 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
GDCALCFG_00922 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
GDCALCFG_00923 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
GDCALCFG_00924 3.7e-190 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
GDCALCFG_00925 3.7e-179 rapZ S Displays ATPase and GTPase activities
GDCALCFG_00926 3.5e-169 whiA K May be required for sporulation
GDCALCFG_00927 8.4e-221 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
GDCALCFG_00928 1e-145 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GDCALCFG_00929 2.5e-34 secG U Preprotein translocase SecG subunit
GDCALCFG_00930 1.5e-177 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
GDCALCFG_00931 2.9e-159 S Sucrose-6F-phosphate phosphohydrolase
GDCALCFG_00932 4e-300 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
GDCALCFG_00933 1.9e-188
GDCALCFG_00934 8.1e-241 brnQ U Component of the transport system for branched-chain amino acids
GDCALCFG_00935 1e-201 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
GDCALCFG_00936 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
GDCALCFG_00937 9.7e-192 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
GDCALCFG_00938 6.8e-212 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
GDCALCFG_00939 7.3e-157 G Fructosamine kinase
GDCALCFG_00940 1.8e-156 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
GDCALCFG_00941 1.2e-133 S PAC2 family
GDCALCFG_00947 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GDCALCFG_00948 3.1e-112 hit 2.7.7.53 FG HIT domain
GDCALCFG_00949 2e-111 yebC K transcriptional regulatory protein
GDCALCFG_00950 2.7e-100 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
GDCALCFG_00951 3.2e-107 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
GDCALCFG_00952 9.4e-200 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
GDCALCFG_00953 1.2e-52 yajC U Preprotein translocase subunit
GDCALCFG_00954 2.7e-100 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GDCALCFG_00955 3.1e-223 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
GDCALCFG_00956 2.9e-165 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
GDCALCFG_00957 6e-236
GDCALCFG_00958 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
GDCALCFG_00959 4.8e-32
GDCALCFG_00960 2.9e-120 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GDCALCFG_00961 4.5e-143 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GDCALCFG_00962 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
GDCALCFG_00964 2.3e-164 supH S Sucrose-6F-phosphate phosphohydrolase
GDCALCFG_00965 1e-292 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
GDCALCFG_00966 0.0 pafB K WYL domain
GDCALCFG_00967 6.8e-53
GDCALCFG_00968 0.0 helY L DEAD DEAH box helicase
GDCALCFG_00969 5.1e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
GDCALCFG_00970 5.7e-140 pgp 3.1.3.18 S HAD-hyrolase-like
GDCALCFG_00971 4.7e-37
GDCALCFG_00972 1.1e-63
GDCALCFG_00973 3.2e-110 K helix_turn_helix, mercury resistance
GDCALCFG_00974 6.7e-75 garA T Inner membrane component of T3SS, cytoplasmic domain
GDCALCFG_00975 4.2e-139 S Bacterial protein of unknown function (DUF881)
GDCALCFG_00976 3.9e-35 sbp S Protein of unknown function (DUF1290)
GDCALCFG_00977 1.7e-171 S Bacterial protein of unknown function (DUF881)
GDCALCFG_00978 1.2e-106 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GDCALCFG_00979 7.9e-157 hisG 2.4.2.17 F ATP phosphoribosyltransferase
GDCALCFG_00980 9.9e-42 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
GDCALCFG_00981 5.5e-113 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
GDCALCFG_00982 1.7e-184 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GDCALCFG_00983 2.1e-160 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
GDCALCFG_00984 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
GDCALCFG_00985 4.2e-132 S SOS response associated peptidase (SRAP)
GDCALCFG_00986 9.1e-153 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
GDCALCFG_00987 3.1e-259 mmuP E amino acid
GDCALCFG_00988 1.9e-50 EGP Major facilitator Superfamily
GDCALCFG_00989 3.4e-191 V VanZ like family
GDCALCFG_00990 4.8e-15 cefD 5.1.1.17 E Aminotransferase, class V
GDCALCFG_00991 3.9e-36 cefD 5.1.1.17 E Aminotransferase class-V
GDCALCFG_00992 3.3e-100 S Acetyltransferase (GNAT) domain
GDCALCFG_00993 3.3e-50
GDCALCFG_00994 5.2e-121
GDCALCFG_00997 3.8e-08 K helix_turn_helix, Lux Regulon
GDCALCFG_00998 4.5e-20 2.7.13.3 T Histidine kinase
GDCALCFG_00999 5.5e-193 2.7.13.3 T Histidine kinase
GDCALCFG_01000 2e-126 K helix_turn_helix, Lux Regulon
GDCALCFG_01001 4.4e-94
GDCALCFG_01002 3.6e-144 M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GDCALCFG_01003 1.4e-124 lolD Q ATPases associated with a variety of cellular activities
GDCALCFG_01004 4e-175 V MacB-like periplasmic core domain
GDCALCFG_01005 2.1e-39 relB L RelB antitoxin
GDCALCFG_01006 9.4e-49 S Bacterial toxin of type II toxin-antitoxin system, YafQ
GDCALCFG_01007 4.3e-25 2.7.13.3 T Histidine kinase
GDCALCFG_01008 8e-94 rpoE4 K Sigma-70 region 2
GDCALCFG_01009 3.2e-22 S Psort location CytoplasmicMembrane, score
GDCALCFG_01010 2.1e-106
GDCALCFG_01011 2.9e-137
GDCALCFG_01012 2e-163 yfiL V ATPases associated with a variety of cellular activities
GDCALCFG_01013 2e-70
GDCALCFG_01014 5.3e-62
GDCALCFG_01015 5.3e-148 S EamA-like transporter family
GDCALCFG_01016 1.4e-102
GDCALCFG_01017 4.6e-129
GDCALCFG_01018 1.4e-121 V ATPases associated with a variety of cellular activities
GDCALCFG_01019 2e-109 L Transposase and inactivated derivatives IS30 family
GDCALCFG_01020 3.5e-10 L Transposase DDE domain
GDCALCFG_01021 1.7e-273 aspA 4.3.1.1 E Fumarase C C-terminus
GDCALCFG_01022 1.7e-137 M Mechanosensitive ion channel
GDCALCFG_01023 9.9e-186 S CAAX protease self-immunity
GDCALCFG_01024 1.5e-239 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
GDCALCFG_01025 1.4e-151 U Binding-protein-dependent transport system inner membrane component
GDCALCFG_01026 9.9e-161 U Binding-protein-dependent transport system inner membrane component
GDCALCFG_01027 9.9e-219 P Bacterial extracellular solute-binding protein
GDCALCFG_01028 7e-228 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
GDCALCFG_01029 2.7e-180 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
GDCALCFG_01030 8.8e-189 plsC2 2.3.1.51 I Phosphate acyltransferases
GDCALCFG_01031 1.4e-63 psp1 3.5.99.10 J Endoribonuclease L-PSP
GDCALCFG_01034 6.9e-118 cyaA 4.6.1.1 S CYTH
GDCALCFG_01035 1.1e-170 trxA2 O Tetratricopeptide repeat
GDCALCFG_01036 7.8e-180
GDCALCFG_01037 4e-186
GDCALCFG_01038 9.4e-159 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
GDCALCFG_01039 1.4e-130 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
GDCALCFG_01040 3.6e-48 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
GDCALCFG_01041 6.1e-282 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GDCALCFG_01042 5.5e-164 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GDCALCFG_01043 1.3e-309 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GDCALCFG_01044 2.4e-150 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GDCALCFG_01045 2.9e-61 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GDCALCFG_01046 1.7e-29 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GDCALCFG_01047 6.4e-148 atpB C it plays a direct role in the translocation of protons across the membrane
GDCALCFG_01048 1.6e-207 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
GDCALCFG_01050 0.0 K RNA polymerase II activating transcription factor binding
GDCALCFG_01051 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
GDCALCFG_01052 4e-92 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
GDCALCFG_01053 1.6e-97 mntP P Probably functions as a manganese efflux pump
GDCALCFG_01054 3.7e-67
GDCALCFG_01055 4.6e-135 KT Transcriptional regulatory protein, C terminal
GDCALCFG_01056 1.3e-125 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GDCALCFG_01057 1.9e-278 E Bacterial extracellular solute-binding proteins, family 5 Middle
GDCALCFG_01058 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
GDCALCFG_01059 0.0 S domain protein
GDCALCFG_01060 6.8e-63 tyrA 5.4.99.5 E Chorismate mutase type II
GDCALCFG_01061 1.4e-131 rafA 3.2.1.22 G alpha-galactosidase
GDCALCFG_01062 1.3e-114 araQ U Binding-protein-dependent transport system inner membrane component
GDCALCFG_01063 9.5e-121 lacF P Binding-protein-dependent transport system inner membrane component
GDCALCFG_01064 2.6e-154 araN G Bacterial extracellular solute-binding protein
GDCALCFG_01065 5.1e-50 K helix_turn_helix, arabinose operon control protein
GDCALCFG_01066 1.4e-142 L Transposase
GDCALCFG_01067 1.9e-37 pabC 2.6.1.42, 4.1.3.38 EH Amino-transferase class IV
GDCALCFG_01069 2.7e-293 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
GDCALCFG_01070 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
GDCALCFG_01071 3.3e-52 S Protein of unknown function (DUF2469)
GDCALCFG_01072 1.1e-195 2.3.1.57 J Acetyltransferase (GNAT) domain
GDCALCFG_01073 1.3e-282 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GDCALCFG_01074 7.8e-288 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
GDCALCFG_01075 2.7e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GDCALCFG_01076 4.2e-38 K Psort location Cytoplasmic, score
GDCALCFG_01077 5.6e-55 K Psort location Cytoplasmic, score
GDCALCFG_01078 3.7e-180
GDCALCFG_01079 1.4e-167 V ABC transporter
GDCALCFG_01080 5.3e-170 spoU 2.1.1.185 J RNA methyltransferase TrmH family
GDCALCFG_01081 3.1e-110 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GDCALCFG_01082 1.6e-210 rmuC S RmuC family
GDCALCFG_01083 3.3e-43 csoR S Metal-sensitive transcriptional repressor
GDCALCFG_01084 0.0 pacS 1.9.3.1, 3.6.3.54 P E1-E2 ATPase
GDCALCFG_01085 1.9e-130 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
GDCALCFG_01086 1e-127 xerH L Belongs to the 'phage' integrase family
GDCALCFG_01087 8.6e-60
GDCALCFG_01088 6.2e-43
GDCALCFG_01089 6e-189 EGP Major Facilitator Superfamily
GDCALCFG_01090 1.8e-20 L Transposase
GDCALCFG_01091 5.5e-209 2.7.13.3 T Histidine kinase
GDCALCFG_01092 1.3e-111 K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
GDCALCFG_01093 3.1e-130 V ABC transporter
GDCALCFG_01094 1.9e-116
GDCALCFG_01095 4.1e-39 L Transposase
GDCALCFG_01097 7.7e-71 rplI J Binds to the 23S rRNA
GDCALCFG_01098 2e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GDCALCFG_01099 6e-72 ssb1 L Single-stranded DNA-binding protein
GDCALCFG_01100 4.6e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
GDCALCFG_01101 1.3e-187 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GDCALCFG_01102 2.2e-154 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
GDCALCFG_01103 2.3e-245 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
GDCALCFG_01104 0.0 ubiB S ABC1 family
GDCALCFG_01105 5.5e-38 S granule-associated protein
GDCALCFG_01106 2.4e-141 cobQ S CobB/CobQ-like glutamine amidotransferase domain
GDCALCFG_01107 5.2e-246 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
GDCALCFG_01108 3.3e-257 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
GDCALCFG_01109 2e-239 dinF V MatE
GDCALCFG_01110 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
GDCALCFG_01111 1e-54 glnB K Nitrogen regulatory protein P-II
GDCALCFG_01112 4.9e-227 amt U Ammonium Transporter Family
GDCALCFG_01113 2.2e-171 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
GDCALCFG_01114 1e-151 icaR K Bacterial regulatory proteins, tetR family
GDCALCFG_01115 1.1e-197 XK27_01805 M Glycosyltransferase like family 2
GDCALCFG_01116 1.1e-299 pepD E Peptidase family C69
GDCALCFG_01118 1.5e-290 3.5.2.6 V Beta-lactamase enzyme family
GDCALCFG_01119 2e-304 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GDCALCFG_01120 4.1e-192 opcA G Glucose-6-phosphate dehydrogenase subunit
GDCALCFG_01121 1.3e-140 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
GDCALCFG_01122 2.2e-271 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GDCALCFG_01123 2.7e-252 S Putative ABC-transporter type IV
GDCALCFG_01124 0.0 pip S YhgE Pip domain protein
GDCALCFG_01125 6.2e-307 pip S YhgE Pip domain protein
GDCALCFG_01127 3.2e-101 K Psort location Cytoplasmic, score 8.87
GDCALCFG_01128 8.4e-67 S FMN_bind
GDCALCFG_01129 4.5e-146 macB V ABC transporter, ATP-binding protein
GDCALCFG_01130 2.1e-199 Z012_06715 V FtsX-like permease family
GDCALCFG_01131 1.7e-227 macB_2 V ABC transporter permease
GDCALCFG_01132 1.6e-230 S Predicted membrane protein (DUF2318)
GDCALCFG_01133 1.6e-99 tpd P Fe2+ transport protein
GDCALCFG_01134 0.0 efeU_1 P Iron permease FTR1 family
GDCALCFG_01135 1.4e-66 L Phage integrase, N-terminal SAM-like domain
GDCALCFG_01138 4.2e-294 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GDCALCFG_01140 7.5e-146 S Protein of unknown function (DUF805)
GDCALCFG_01141 3.6e-232 3.1.1.31 G Lactonase, 7-bladed beta-propeller
GDCALCFG_01142 8.2e-118
GDCALCFG_01143 1.7e-122 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
GDCALCFG_01144 2.8e-247 EGP Major facilitator Superfamily
GDCALCFG_01145 4.7e-97 askB 1.1.1.3, 2.7.2.4 E ACT domain
GDCALCFG_01146 1.3e-134 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
GDCALCFG_01147 3.6e-193 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
GDCALCFG_01148 3e-40 V Abi-like protein
GDCALCFG_01149 8.9e-202 3.4.22.70 M Sortase family
GDCALCFG_01150 1.8e-26 S Polyketide cyclase / dehydrase and lipid transport
GDCALCFG_01151 8.7e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GDCALCFG_01152 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
GDCALCFG_01153 3.2e-96 K Bacterial regulatory proteins, tetR family
GDCALCFG_01154 1.7e-215 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
GDCALCFG_01155 6.5e-54 S TIGRFAM helicase secretion neighborhood TadE-like protein
GDCALCFG_01156 1.4e-57 U TadE-like protein
GDCALCFG_01157 1.1e-41 S Protein of unknown function (DUF4244)
GDCALCFG_01158 3.1e-116 gspF NU Type II secretion system (T2SS), protein F
GDCALCFG_01159 1.2e-74 U Type ii secretion system
GDCALCFG_01160 5.9e-191 cpaF U Type II IV secretion system protein
GDCALCFG_01161 4.9e-124 cpaE D bacterial-type flagellum organization
GDCALCFG_01162 1.6e-134 dedA S SNARE associated Golgi protein
GDCALCFG_01163 2.3e-127 S HAD hydrolase, family IA, variant 3
GDCALCFG_01164 2.5e-141 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
GDCALCFG_01165 5.1e-115 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
GDCALCFG_01166 3.1e-17 F Psort location CytoplasmicMembrane, score 10.00
GDCALCFG_01167 1.2e-103 hspR K transcriptional regulator, MerR family
GDCALCFG_01168 2.1e-156 dnaJ1 O DnaJ molecular chaperone homology domain
GDCALCFG_01169 1e-58 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GDCALCFG_01170 0.0 dnaK O Heat shock 70 kDa protein
GDCALCFG_01171 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 M Aamy_C
GDCALCFG_01172 1.1e-194 K Psort location Cytoplasmic, score
GDCALCFG_01173 1.9e-144 traX S TraX protein
GDCALCFG_01174 1.7e-165 malG G Binding-protein-dependent transport system inner membrane component
GDCALCFG_01175 6.6e-131 malF G Binding-protein-dependent transport system inner membrane component
GDCALCFG_01176 1.7e-142 cobB2 K Sir2 family
GDCALCFG_01177 2.7e-230 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
GDCALCFG_01178 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
GDCALCFG_01179 2.9e-154 G Binding-protein-dependent transport system inner membrane component
GDCALCFG_01180 1.1e-143 malC G Binding-protein-dependent transport system inner membrane component
GDCALCFG_01181 6.8e-245 msmE7 G Bacterial extracellular solute-binding protein
GDCALCFG_01182 1.2e-230 nagC GK ROK family
GDCALCFG_01183 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
GDCALCFG_01184 8.3e-78 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
GDCALCFG_01185 0.0 yjcE P Sodium/hydrogen exchanger family
GDCALCFG_01186 3.3e-120 S membrane transporter protein
GDCALCFG_01187 7.8e-148 ypfH S Phospholipase/Carboxylesterase
GDCALCFG_01188 2.6e-155
GDCALCFG_01189 9e-112 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
GDCALCFG_01190 2.3e-36
GDCALCFG_01191 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
GDCALCFG_01192 2e-16 K helix_turn _helix lactose operon repressor
GDCALCFG_01193 7.5e-86 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GDCALCFG_01194 1.6e-288 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
GDCALCFG_01195 3.5e-206 EGP Major facilitator Superfamily
GDCALCFG_01196 7.5e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GDCALCFG_01197 1.3e-167 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
GDCALCFG_01198 4.6e-301 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
GDCALCFG_01199 1.6e-271 KLT Domain of unknown function (DUF4032)
GDCALCFG_01200 8.8e-156
GDCALCFG_01201 7.6e-18 tnp7109-21 L Integrase core domain
GDCALCFG_01202 1.1e-131 K helix_turn _helix lactose operon repressor
GDCALCFG_01203 1.1e-146 G Periplasmic binding protein domain
GDCALCFG_01204 8.7e-178 3.6.3.17 G ATPases associated with a variety of cellular activities
GDCALCFG_01205 5e-142 U Branched-chain amino acid transport system / permease component
GDCALCFG_01206 7.6e-186
GDCALCFG_01207 4.1e-112 tnp3514b L Winged helix-turn helix
GDCALCFG_01208 3.9e-50 S LPXTG-motif cell wall anchor domain protein
GDCALCFG_01209 4.3e-211 ugpC E Belongs to the ABC transporter superfamily
GDCALCFG_01210 3e-136 K UTRA domain
GDCALCFG_01211 8.4e-241 ulaA 2.7.1.194 S PTS system sugar-specific permease component
GDCALCFG_01212 3.7e-45 ulaB 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
GDCALCFG_01213 2.1e-73 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GDCALCFG_01214 3.1e-220 2.4.1.166 GT2 M Glycosyltransferase like family 2
GDCALCFG_01215 1.3e-190 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GDCALCFG_01217 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GDCALCFG_01218 2.3e-87 nrdI F Probably involved in ribonucleotide reductase function
GDCALCFG_01219 3.1e-43 nrdH O Glutaredoxin
GDCALCFG_01220 2.8e-122 S Psort location CytoplasmicMembrane, score
GDCALCFG_01221 0.0 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
GDCALCFG_01222 3.1e-121 K Helix-turn-helix XRE-family like proteins
GDCALCFG_01223 2.5e-27 T LytTr DNA-binding domain
GDCALCFG_01224 8.8e-34 T LytTr DNA-binding domain
GDCALCFG_01225 0.0 3.2.1.21 GH3 G Fibronectin type III-like domain
GDCALCFG_01226 0.0 KLT Protein tyrosine kinase
GDCALCFG_01227 6.8e-136 O Thioredoxin
GDCALCFG_01229 2e-216 S G5
GDCALCFG_01230 2.2e-168 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
GDCALCFG_01231 1.5e-177 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
GDCALCFG_01232 3.1e-110 S LytR cell envelope-related transcriptional attenuator
GDCALCFG_01233 1.6e-282 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
GDCALCFG_01234 2.8e-166 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
GDCALCFG_01235 0.0
GDCALCFG_01236 0.0 murJ KLT MviN-like protein
GDCALCFG_01237 7e-176 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
GDCALCFG_01238 1.4e-221 parB K Belongs to the ParB family
GDCALCFG_01239 2.4e-173 parA D CobQ CobB MinD ParA nucleotide binding domain protein
GDCALCFG_01240 1.2e-123 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
GDCALCFG_01241 4.3e-92 jag S Putative single-stranded nucleic acids-binding domain
GDCALCFG_01242 1.3e-182 yidC U Membrane protein insertase, YidC Oxa1 family
GDCALCFG_01243 2.9e-57 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
GDCALCFG_01244 2.6e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
GDCALCFG_01245 3.3e-280 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GDCALCFG_01246 1.9e-206 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
GDCALCFG_01247 6.4e-202 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GDCALCFG_01248 4.2e-83 S Protein of unknown function (DUF721)
GDCALCFG_01249 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GDCALCFG_01250 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GDCALCFG_01251 3.2e-50 S Transmembrane domain of unknown function (DUF3566)
GDCALCFG_01252 1.5e-183 lacR K Transcriptional regulator, LacI family
GDCALCFG_01253 7.8e-14 lacS G Psort location CytoplasmicMembrane, score 10.00
GDCALCFG_01254 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GDCALCFG_01255 1.9e-205 V VanZ like family
GDCALCFG_01256 2.5e-258 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
GDCALCFG_01257 2.5e-194 S Psort location CytoplasmicMembrane, score
GDCALCFG_01260 1.3e-122 S Protein of unknown function DUF45
GDCALCFG_01262 3.6e-257 S Domain of unknown function (DUF4143)
GDCALCFG_01263 3.3e-83 dps P Belongs to the Dps family
GDCALCFG_01264 2.9e-118 L Transposase and inactivated derivatives IS30 family
GDCALCFG_01265 1.1e-88 amyE G Bacterial extracellular solute-binding protein
GDCALCFG_01266 1e-114 S Protein of unknown function, DUF624
GDCALCFG_01267 3.8e-201 K Periplasmic binding protein domain
GDCALCFG_01268 2.1e-292 3.2.1.26 GH32 G Glycosyl hydrolases family 32
GDCALCFG_01269 5.9e-252 amyE G Bacterial extracellular solute-binding protein
GDCALCFG_01270 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
GDCALCFG_01271 3e-187 K Psort location Cytoplasmic, score
GDCALCFG_01272 4.9e-81 L Transposase and inactivated derivatives IS30 family
GDCALCFG_01273 5.7e-118
GDCALCFG_01274 0.0 XK27_09800 I Psort location CytoplasmicMembrane, score 9.99
GDCALCFG_01275 1.9e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GDCALCFG_01277 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
GDCALCFG_01278 1.7e-232 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GDCALCFG_01279 7.8e-252 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
GDCALCFG_01280 1.9e-214 ykiI
GDCALCFG_01281 5.3e-107
GDCALCFG_01282 2.5e-186 L Helix-turn-helix domain
GDCALCFG_01283 1.4e-104 L Resolvase, N terminal domain
GDCALCFG_01285 1.2e-20 tag 3.2.2.20 L Methyladenine glycosylase
GDCALCFG_01286 4.7e-125 S GyrI-like small molecule binding domain
GDCALCFG_01287 9e-89 K Putative zinc ribbon domain
GDCALCFG_01288 1.4e-24 zntR K bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
GDCALCFG_01289 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
GDCALCFG_01290 4e-127 3.6.1.13 L NUDIX domain
GDCALCFG_01291 3.3e-177 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
GDCALCFG_01292 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GDCALCFG_01293 2.8e-124 pdtaR T Response regulator receiver domain protein
GDCALCFG_01295 1.1e-109 aspA 3.6.1.13 L NUDIX domain
GDCALCFG_01296 2.7e-274 pyk 2.7.1.40 G Pyruvate kinase
GDCALCFG_01297 2.1e-177 terC P Integral membrane protein, TerC family
GDCALCFG_01298 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
GDCALCFG_01299 1.6e-115 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GDCALCFG_01300 3.2e-254 rpsA J Ribosomal protein S1
GDCALCFG_01301 5.8e-163 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GDCALCFG_01302 3e-183 P Zinc-uptake complex component A periplasmic
GDCALCFG_01303 1.9e-161 znuC P ATPases associated with a variety of cellular activities
GDCALCFG_01304 5.2e-137 znuB U ABC 3 transport family
GDCALCFG_01305 1.8e-87 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
GDCALCFG_01306 2.1e-100 carD K CarD-like/TRCF domain
GDCALCFG_01307 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
GDCALCFG_01308 2.9e-128 T Response regulator receiver domain protein
GDCALCFG_01309 4.4e-197 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GDCALCFG_01310 5e-122 ctsW S Phosphoribosyl transferase domain
GDCALCFG_01311 1.8e-150 cof 5.2.1.8 T Eukaryotic phosphomannomutase
GDCALCFG_01312 6.3e-78 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
GDCALCFG_01313 7.9e-264
GDCALCFG_01314 0.0 S Glycosyl transferase, family 2
GDCALCFG_01315 1.8e-55 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
GDCALCFG_01316 1.9e-205 K Cell envelope-related transcriptional attenuator domain
GDCALCFG_01317 0.0 D FtsK/SpoIIIE family
GDCALCFG_01318 4.9e-47 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
GDCALCFG_01319 1.1e-278 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GDCALCFG_01320 1.1e-146 yplQ S Haemolysin-III related
GDCALCFG_01321 4.4e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GDCALCFG_01322 1.4e-74 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
GDCALCFG_01323 1.2e-282 sdaA 4.3.1.17 E Serine dehydratase alpha chain
GDCALCFG_01324 2.9e-94
GDCALCFG_01325 1.7e-07 int8 L Phage integrase family
GDCALCFG_01326 5.1e-15 int8 L Phage integrase family
GDCALCFG_01327 1.6e-58 int8 L Phage integrase family
GDCALCFG_01329 8.5e-10 S Predicted membrane protein (DUF2335)
GDCALCFG_01330 1.3e-07
GDCALCFG_01333 1.1e-33
GDCALCFG_01334 5.1e-07
GDCALCFG_01335 1e-46 XK27_00240 K Fic/DOC family
GDCALCFG_01337 3.8e-108 L PFAM Integrase catalytic
GDCALCFG_01338 3.7e-47 L PFAM Integrase catalytic
GDCALCFG_01339 3.8e-147 K helix_turn _helix lactose operon repressor
GDCALCFG_01340 2.7e-237 bfrA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
GDCALCFG_01341 9.7e-258 M Protein of unknown function (DUF2961)
GDCALCFG_01342 2e-128 P Binding-protein-dependent transport systems inner membrane component
GDCALCFG_01343 3.3e-126 P Binding-protein-dependent transport system inner membrane component
GDCALCFG_01344 2.5e-210 G Bacterial extracellular solute-binding protein
GDCALCFG_01345 7e-62 pin L Resolvase, N terminal domain
GDCALCFG_01347 7.9e-26 L Transposase
GDCALCFG_01348 1.1e-25 L HTH-like domain
GDCALCFG_01349 6.4e-40 L HTH-like domain
GDCALCFG_01350 4.2e-80 L Transposase and inactivated derivatives IS30 family
GDCALCFG_01351 2.5e-17
GDCALCFG_01352 5.5e-113 parA D AAA domain
GDCALCFG_01353 1.9e-81 S Transcription factor WhiB
GDCALCFG_01354 1e-35
GDCALCFG_01355 1.2e-181 S Helix-turn-helix domain
GDCALCFG_01356 8e-15
GDCALCFG_01357 3.9e-27
GDCALCFG_01358 5.6e-119
GDCALCFG_01359 8.9e-65
GDCALCFG_01361 7.5e-116 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GDCALCFG_01362 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GDCALCFG_01363 8.5e-84 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
GDCALCFG_01364 1.4e-47 S Domain of unknown function (DUF4193)
GDCALCFG_01365 1.2e-149 S Protein of unknown function (DUF3071)
GDCALCFG_01366 1.5e-233 S Type I phosphodiesterase / nucleotide pyrophosphatase
GDCALCFG_01367 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
GDCALCFG_01369 5.2e-43 K Psort location Cytoplasmic, score
GDCALCFG_01370 1.2e-48 K Psort location Cytoplasmic, score
GDCALCFG_01371 0.0 lhr L DEAD DEAH box helicase
GDCALCFG_01372 3.1e-173 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GDCALCFG_01373 1.7e-221 G Major Facilitator Superfamily
GDCALCFG_01374 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
GDCALCFG_01375 2.4e-190 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
GDCALCFG_01376 9.6e-115
GDCALCFG_01377 6.5e-196 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
GDCALCFG_01378 0.0 pknL 2.7.11.1 KLT PASTA
GDCALCFG_01379 4e-130 plsC2 2.3.1.51 I Phosphate acyltransferases
GDCALCFG_01380 2.7e-115
GDCALCFG_01381 3e-190 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
GDCALCFG_01382 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GDCALCFG_01383 2.4e-113 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GDCALCFG_01384 6e-103 recX S Modulates RecA activity
GDCALCFG_01385 5.4e-196 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GDCALCFG_01386 7e-39 S Protein of unknown function (DUF3046)
GDCALCFG_01387 2.6e-78 K Helix-turn-helix XRE-family like proteins
GDCALCFG_01388 1.7e-91 cinA 3.5.1.42 S Belongs to the CinA family
GDCALCFG_01389 6.1e-117 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GDCALCFG_01390 0.0 ftsK D FtsK SpoIIIE family protein
GDCALCFG_01391 4.6e-150 fic D Fic/DOC family
GDCALCFG_01392 2.5e-183 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GDCALCFG_01393 1.2e-277 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
GDCALCFG_01394 2e-149 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
GDCALCFG_01395 4.5e-164 ydeD EG EamA-like transporter family
GDCALCFG_01396 1.1e-136 ybhL S Belongs to the BI1 family
GDCALCFG_01397 5.5e-112 K helix_turn_helix, Lux Regulon
GDCALCFG_01398 1.3e-119 E Psort location Cytoplasmic, score 8.87
GDCALCFG_01399 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
GDCALCFG_01400 0.0 ctpE P E1-E2 ATPase
GDCALCFG_01401 4.1e-96
GDCALCFG_01402 5.5e-239 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GDCALCFG_01403 3.8e-134 S Protein of unknown function (DUF3159)
GDCALCFG_01404 1.5e-155 S Protein of unknown function (DUF3710)
GDCALCFG_01405 1.7e-170 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
GDCALCFG_01406 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
GDCALCFG_01407 1.6e-172 dppC EP N-terminal TM domain of oligopeptide transport permease C
GDCALCFG_01408 8.9e-154 dppB EP Binding-protein-dependent transport system inner membrane component
GDCALCFG_01409 0.0 E ABC transporter, substrate-binding protein, family 5
GDCALCFG_01410 3.6e-188 xerC D Belongs to the 'phage' integrase family. XerC subfamily
GDCALCFG_01411 6.4e-148 V ABC transporter, ATP-binding protein
GDCALCFG_01412 0.0 MV MacB-like periplasmic core domain
GDCALCFG_01413 4.5e-42
GDCALCFG_01414 7.2e-189 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
GDCALCFG_01415 2e-188 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
GDCALCFG_01416 1e-78
GDCALCFG_01417 0.0 typA T Elongation factor G C-terminus
GDCALCFG_01418 7e-107 K Virulence activator alpha C-term
GDCALCFG_01419 4.8e-137 V ATPases associated with a variety of cellular activities
GDCALCFG_01420 0.0 V FtsX-like permease family
GDCALCFG_01421 6.7e-243 naiP U Sugar (and other) transporter
GDCALCFG_01422 1.8e-237 iscS1 2.8.1.7 E Aminotransferase class-V
GDCALCFG_01423 3.8e-162 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, N-terminal domain
GDCALCFG_01424 1.3e-301 nadB 1.3.5.4, 1.4.3.16, 2.4.2.19 H Catalyzes the oxidation of L-aspartate to iminoaspartate
GDCALCFG_01425 9.8e-252 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
GDCALCFG_01426 3.4e-160 nrtR 3.6.1.55 F NUDIX hydrolase
GDCALCFG_01427 1.4e-116 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GDCALCFG_01428 8.5e-151 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
GDCALCFG_01429 3.8e-152 soj D CobQ CobB MinD ParA nucleotide binding domain protein
GDCALCFG_01430 3.2e-159 xerD D recombinase XerD
GDCALCFG_01431 6.6e-215 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
GDCALCFG_01432 1.8e-60 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GDCALCFG_01433 6.2e-25 rpmI J Ribosomal protein L35
GDCALCFG_01434 1.7e-113 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GDCALCFG_01435 1.3e-50 S Spermine/spermidine synthase domain
GDCALCFG_01436 2.5e-135 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
GDCALCFG_01437 1.3e-196 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
GDCALCFG_01438 8.5e-90 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GDCALCFG_01439 7.5e-183 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
GDCALCFG_01440 8.5e-192 galM 5.1.3.3 G Aldose 1-epimerase
GDCALCFG_01441 6.2e-187 galM 5.1.3.3 G Aldose 1-epimerase
GDCALCFG_01442 3.3e-52
GDCALCFG_01443 3.6e-137 sigH K Belongs to the sigma-70 factor family. ECF subfamily
GDCALCFG_01444 7.1e-297 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GDCALCFG_01445 1.2e-191 V Acetyltransferase (GNAT) domain
GDCALCFG_01446 9.7e-20 V Acetyltransferase (GNAT) domain
GDCALCFG_01447 3.5e-40 V Acetyltransferase (GNAT) domain
GDCALCFG_01448 0.0 smc D Required for chromosome condensation and partitioning
GDCALCFG_01449 2e-302 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
GDCALCFG_01450 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
GDCALCFG_01451 6.6e-98 3.6.1.55 F NUDIX domain
GDCALCFG_01452 1.5e-247 nagA 3.5.1.25 G Amidohydrolase family
GDCALCFG_01453 6.2e-151 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GDCALCFG_01454 3.6e-210 GK ROK family
GDCALCFG_01455 2.2e-165 2.7.1.2 GK ROK family
GDCALCFG_01456 4.8e-224 GK ROK family
GDCALCFG_01457 4.7e-168 2.7.1.4 G pfkB family carbohydrate kinase
GDCALCFG_01458 2e-98 G Major Facilitator Superfamily
GDCALCFG_01459 7.9e-85 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GDCALCFG_01460 7.7e-14
GDCALCFG_01461 7.3e-173 ftsQ 6.3.2.4 D Cell division protein FtsQ
GDCALCFG_01462 4.9e-282 murC 6.3.2.8 M Belongs to the MurCDEF family
GDCALCFG_01463 4.2e-217 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GDCALCFG_01464 3.3e-225 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
GDCALCFG_01465 5.1e-273 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GDCALCFG_01466 1.2e-205 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GDCALCFG_01467 2e-240 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
GDCALCFG_01468 2e-155 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GDCALCFG_01469 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
GDCALCFG_01470 1.4e-67 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
GDCALCFG_01471 5.1e-190 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
GDCALCFG_01472 2.2e-93 mraZ K Belongs to the MraZ family
GDCALCFG_01473 0.0 L DNA helicase
GDCALCFG_01474 7.5e-230 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
GDCALCFG_01475 8.4e-78 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GDCALCFG_01476 7.4e-46 M Lysin motif
GDCALCFG_01477 5.8e-129 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GDCALCFG_01478 4.1e-162 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GDCALCFG_01479 1.7e-176 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
GDCALCFG_01480 1.2e-272 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GDCALCFG_01481 3.4e-123 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
GDCALCFG_01482 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
GDCALCFG_01483 1.3e-216 EGP Major facilitator Superfamily
GDCALCFG_01484 2.1e-265 glnA2 6.3.1.2 E glutamine synthetase
GDCALCFG_01485 8.1e-279 S Uncharacterized protein conserved in bacteria (DUF2252)
GDCALCFG_01486 4.1e-130 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
GDCALCFG_01487 1.4e-121 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
GDCALCFG_01488 2.3e-99
GDCALCFG_01489 2.7e-111 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
GDCALCFG_01490 3.1e-220 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
GDCALCFG_01491 4.8e-252 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
GDCALCFG_01492 1.1e-53 acyP 3.6.1.7 C Acylphosphatase
GDCALCFG_01493 7.7e-157 yvgN 1.1.1.346 S Aldo/keto reductase family
GDCALCFG_01494 0.0 2.4.1.230, 3.2.1.51 GH65,GH95 G Glycosyl hydrolase family 65, N-terminal domain
GDCALCFG_01495 2.8e-165 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
GDCALCFG_01496 1.1e-155 S Amidohydrolase
GDCALCFG_01497 3e-142 IQ KR domain
GDCALCFG_01498 2.9e-165 4.2.1.68 M Enolase C-terminal domain-like
GDCALCFG_01499 3.2e-23 P ATPases associated with a variety of cellular activities
GDCALCFG_01500 1.2e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
GDCALCFG_01501 2.3e-82 argR K Regulates arginine biosynthesis genes
GDCALCFG_01502 3.9e-184 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GDCALCFG_01503 1.3e-248 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
GDCALCFG_01504 4.1e-178 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
GDCALCFG_01505 7.4e-214 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
GDCALCFG_01506 1.5e-203 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
GDCALCFG_01507 1.1e-92
GDCALCFG_01508 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
GDCALCFG_01509 7.7e-202 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GDCALCFG_01510 6e-160 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GDCALCFG_01511 7.4e-164 cbiQ P Cobalt transport protein
GDCALCFG_01512 1.8e-278 ykoD P ATPases associated with a variety of cellular activities
GDCALCFG_01513 1.8e-107 ykoE S ABC-type cobalt transport system, permease component
GDCALCFG_01514 1.4e-259 argE E Peptidase dimerisation domain
GDCALCFG_01515 6.9e-102 S Protein of unknown function (DUF3043)
GDCALCFG_01516 1.7e-276 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GDCALCFG_01517 9.2e-144 S Domain of unknown function (DUF4191)
GDCALCFG_01518 5e-281 glnA 6.3.1.2 E glutamine synthetase
GDCALCFG_01519 6e-205 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
GDCALCFG_01520 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GDCALCFG_01521 0.0 S Tetratricopeptide repeat
GDCALCFG_01522 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
GDCALCFG_01523 1.2e-138 bioM P ATPases associated with a variety of cellular activities
GDCALCFG_01524 4.8e-224 E Aminotransferase class I and II
GDCALCFG_01525 2e-189 P NMT1/THI5 like
GDCALCFG_01526 1.3e-134 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
GDCALCFG_01527 3.1e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GDCALCFG_01528 4.5e-129 recO L Involved in DNA repair and RecF pathway recombination
GDCALCFG_01529 0.0 I acetylesterase activity
GDCALCFG_01530 4.5e-230 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
GDCALCFG_01531 1.7e-221 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
GDCALCFG_01532 6.8e-210 2.7.11.1 NU Tfp pilus assembly protein FimV
GDCALCFG_01534 1.6e-73 S Protein of unknown function (DUF3052)
GDCALCFG_01535 3.5e-158 lon T Belongs to the peptidase S16 family
GDCALCFG_01536 1.4e-288 S Zincin-like metallopeptidase
GDCALCFG_01537 1.1e-289 uvrD2 3.6.4.12 L DNA helicase
GDCALCFG_01538 1.9e-300 mphA S Aminoglycoside phosphotransferase
GDCALCFG_01539 7.2e-33 S Protein of unknown function (DUF3107)
GDCALCFG_01540 1.6e-168 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
GDCALCFG_01541 4.2e-127 S Vitamin K epoxide reductase
GDCALCFG_01542 6e-171 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
GDCALCFG_01543 4.3e-149 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
GDCALCFG_01544 2.9e-159 S Patatin-like phospholipase
GDCALCFG_01545 4.2e-15 S Domain of unknown function (DUF4143)
GDCALCFG_01546 1.5e-25 S Domain of unknown function (DUF4143)
GDCALCFG_01547 7.2e-116 XK27_08050 O prohibitin homologues
GDCALCFG_01548 2.7e-08 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
GDCALCFG_01549 4.6e-176 S Domain of unknown function (DUF4143)
GDCALCFG_01550 2.5e-42 XAC3035 O Glutaredoxin
GDCALCFG_01551 4e-234 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
GDCALCFG_01552 1.9e-126 ypfH S Phospholipase/Carboxylesterase
GDCALCFG_01553 0.0 tetP J Elongation factor G, domain IV
GDCALCFG_01555 8.3e-136 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
GDCALCFG_01556 1.4e-104 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
GDCALCFG_01557 6.7e-170 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
GDCALCFG_01558 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
GDCALCFG_01559 2.2e-240 carA 6.3.5.5 F Belongs to the CarA family
GDCALCFG_01560 1.7e-93 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GDCALCFG_01561 3.9e-104 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GDCALCFG_01562 8.1e-131 ybbL V ATPases associated with a variety of cellular activities
GDCALCFG_01563 7.1e-136 ybbM V Uncharacterised protein family (UPF0014)
GDCALCFG_01564 0.0 T Diguanylate cyclase, GGDEF domain
GDCALCFG_01565 9.1e-253 3.2.1.14 GH18 S Carbohydrate binding domain
GDCALCFG_01566 0.0 M probably involved in cell wall
GDCALCFG_01568 7.4e-48 4.1.1.44 L Cupin 2, conserved barrel domain protein
GDCALCFG_01569 3.9e-185 S Membrane transport protein
GDCALCFG_01570 3.2e-40 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
GDCALCFG_01571 5.7e-110 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
GDCALCFG_01572 2.6e-126 magIII L endonuclease III
GDCALCFG_01573 1.4e-243 vbsD V MatE
GDCALCFG_01574 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
GDCALCFG_01575 3.4e-29 K LysR substrate binding domain
GDCALCFG_01576 8.1e-148 K LysR substrate binding domain
GDCALCFG_01577 3.8e-190 K helix_turn _helix lactose operon repressor
GDCALCFG_01578 1.4e-143 P Phosphate transporter family
GDCALCFG_01579 3e-163 ugpA P Binding-protein-dependent transport system inner membrane component
GDCALCFG_01580 4e-142 ugpE G Binding-protein-dependent transport system inner membrane component
GDCALCFG_01581 1.5e-239 ugpB G Bacterial extracellular solute-binding protein
GDCALCFG_01582 1.9e-169 ugpQ 3.1.4.46 C Domain of unknown function
GDCALCFG_01583 1.7e-108 P Protein of unknown function DUF47
GDCALCFG_01584 1.4e-259 S Domain of unknown function (DUF4143)
GDCALCFG_01585 4.3e-197 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
GDCALCFG_01586 3e-16 K MerR family regulatory protein
GDCALCFG_01587 5.4e-09 K MerR family regulatory protein
GDCALCFG_01588 9.3e-87 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GDCALCFG_01589 1.3e-60 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GDCALCFG_01590 5e-31 S Psort location CytoplasmicMembrane, score
GDCALCFG_01591 2.7e-186 MA20_14895 S Conserved hypothetical protein 698
GDCALCFG_01592 7.1e-147 rlrG K Bacterial regulatory helix-turn-helix protein, lysR family
GDCALCFG_01593 1e-128 tmp1 S Domain of unknown function (DUF4391)
GDCALCFG_01594 6.2e-232 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GDCALCFG_01595 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GDCALCFG_01596 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
GDCALCFG_01597 9.3e-62 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GDCALCFG_01598 6.6e-111 yocS S SBF-like CPA transporter family (DUF4137)
GDCALCFG_01600 1.5e-194 ltaE 4.1.2.48 E Beta-eliminating lyase
GDCALCFG_01601 8.1e-221 M Glycosyl transferase 4-like domain
GDCALCFG_01602 3.9e-229 mtnE 2.6.1.83 E Aminotransferase class I and II
GDCALCFG_01603 3.6e-225 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
GDCALCFG_01604 3.3e-138 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
GDCALCFG_01605 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
GDCALCFG_01606 1.7e-238 I alpha/beta hydrolase fold
GDCALCFG_01607 3.3e-253 Q D-alanine [D-alanyl carrier protein] ligase activity
GDCALCFG_01608 6.6e-111 Q D-alanine [D-alanyl carrier protein] ligase activity
GDCALCFG_01609 1.1e-101 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
GDCALCFG_01610 1.2e-13 C Aldo/keto reductase family
GDCALCFG_01611 3.5e-32
GDCALCFG_01612 1.2e-299 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
GDCALCFG_01613 2.7e-293 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
GDCALCFG_01614 2.1e-183 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
GDCALCFG_01615 3.7e-243 purD 6.3.4.13 F Belongs to the GARS family
GDCALCFG_01616 8.4e-298 aldH 1.2.1.3, 1.2.1.5 C Aldehyde dehydrogenase family
GDCALCFG_01617 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
GDCALCFG_01618 2.1e-155 P Zinc-uptake complex component A periplasmic
GDCALCFG_01620 8e-181 ycgR S Predicted permease
GDCALCFG_01621 7.8e-140 S TIGRFAM TIGR03943 family protein
GDCALCFG_01622 1.5e-19 zur P Ferric uptake regulator family
GDCALCFG_01623 2.4e-53 zur P Ferric uptake regulator family
GDCALCFG_01624 6.1e-35
GDCALCFG_01625 6.1e-49 XK27_06785 V ABC transporter
GDCALCFG_01626 8.9e-69 zur P Belongs to the Fur family
GDCALCFG_01627 4.2e-225 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GDCALCFG_01628 4.3e-86 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
GDCALCFG_01629 2.4e-181 adh3 C Zinc-binding dehydrogenase
GDCALCFG_01630 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GDCALCFG_01631 1.2e-277 macB_8 V MacB-like periplasmic core domain
GDCALCFG_01632 6.5e-187 M Conserved repeat domain
GDCALCFG_01633 2.1e-135 V ATPases associated with a variety of cellular activities
GDCALCFG_01634 2.1e-85 msrA 1.8.4.11, 1.8.4.12 O peptide-methionine (S)-S-oxide reductase activity
GDCALCFG_01635 0.0 E ABC transporter, substrate-binding protein, family 5
GDCALCFG_01636 3.6e-15 L Psort location Cytoplasmic, score 8.87
GDCALCFG_01637 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
GDCALCFG_01638 7.1e-223 K helix_turn _helix lactose operon repressor
GDCALCFG_01639 4.3e-258 G Bacterial extracellular solute-binding protein
GDCALCFG_01642 2.3e-159 K Helix-turn-helix domain, rpiR family
GDCALCFG_01643 7e-43 G Alpha-L-arabinofuranosidase C-terminal domain
GDCALCFG_01644 3.3e-30
GDCALCFG_01645 8.5e-210 ybiR P Citrate transporter
GDCALCFG_01646 2.2e-295 EK Alanine-glyoxylate amino-transferase
GDCALCFG_01647 1.1e-115 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
GDCALCFG_01648 2e-155 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
GDCALCFG_01649 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
GDCALCFG_01650 1.2e-244 dgt 3.1.5.1 F Phosphohydrolase-associated domain
GDCALCFG_01651 1.5e-263 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GDCALCFG_01652 1.1e-272 yhdG E aromatic amino acid transport protein AroP K03293
GDCALCFG_01653 1.7e-104 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GDCALCFG_01654 2.7e-93 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
GDCALCFG_01655 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
GDCALCFG_01656 4.1e-220 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
GDCALCFG_01657 1.1e-192 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
GDCALCFG_01658 1.3e-137 sapF E ATPases associated with a variety of cellular activities
GDCALCFG_01659 1.9e-136 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
GDCALCFG_01660 1e-147 EP Binding-protein-dependent transport system inner membrane component
GDCALCFG_01661 1.9e-167 P Binding-protein-dependent transport system inner membrane component
GDCALCFG_01662 6.1e-291 E ABC transporter, substrate-binding protein, family 5
GDCALCFG_01663 1.5e-143 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
GDCALCFG_01664 1.5e-277 G Bacterial extracellular solute-binding protein
GDCALCFG_01665 5.1e-259 G Bacterial extracellular solute-binding protein
GDCALCFG_01666 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GDCALCFG_01667 1.4e-168 G ABC transporter permease
GDCALCFG_01668 3.3e-92 malC G Binding-protein-dependent transport system inner membrane component
GDCALCFG_01671 2.1e-38 M COG4886 Leucine-rich repeat (LRR) protein
GDCALCFG_01672 9.9e-143
GDCALCFG_01673 3.4e-25
GDCALCFG_01674 4.5e-136
GDCALCFG_01675 9.7e-61 S PrgI family protein
GDCALCFG_01676 0.0 trsE U type IV secretory pathway VirB4
GDCALCFG_01678 1.6e-212 isp2 3.2.1.96 M CHAP domain
GDCALCFG_01679 1.7e-96
GDCALCFG_01680 5.5e-65
GDCALCFG_01682 1.5e-97 K Helix-turn-helix domain protein
GDCALCFG_01684 0.0 U Type IV secretory system Conjugative DNA transfer
GDCALCFG_01685 9.6e-40
GDCALCFG_01686 1.4e-42
GDCALCFG_01687 0.0 XK27_00500 KL Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
GDCALCFG_01689 3.1e-281
GDCALCFG_01690 1.2e-133 S Protein of unknown function (DUF3801)
GDCALCFG_01691 1.5e-284 ltrBE1 U Relaxase/Mobilisation nuclease domain
GDCALCFG_01692 2.7e-56 S Bacterial mobilisation protein (MobC)
GDCALCFG_01693 2.5e-42 K Protein of unknown function (DUF2442)
GDCALCFG_01694 2.1e-44 S Domain of unknown function (DUF4160)
GDCALCFG_01696 6.8e-34
GDCALCFG_01697 3e-59
GDCALCFG_01698 0.0 topB 5.99.1.2 L DNA topoisomerase
GDCALCFG_01699 3.3e-60
GDCALCFG_01700 2.2e-47
GDCALCFG_01701 1.3e-29 3.1.21.4 L Restriction endonuclease XhoI
GDCALCFG_01703 4e-65 S EcsC protein family
GDCALCFG_01705 6.8e-229 L Phage integrase family
GDCALCFG_01706 3.7e-105 S Protein of unknown function (DUF3800)
GDCALCFG_01707 5.1e-35 S Protein of unknown function DUF262
GDCALCFG_01708 6.8e-105 S Protein of unknown function (DUF1524)
GDCALCFG_01709 4.8e-22 S Protein of unknown function (DUF1524)
GDCALCFG_01711 2.3e-74
GDCALCFG_01713 2.2e-254 S HipA-like C-terminal domain
GDCALCFG_01714 2.9e-171 S Fic/DOC family
GDCALCFG_01715 7e-39
GDCALCFG_01716 0.0 4.2.1.53 S MCRA family
GDCALCFG_01717 1.8e-167 dkgA 1.1.1.346 C Aldo/keto reductase family
GDCALCFG_01718 1.4e-68 yneG S Domain of unknown function (DUF4186)
GDCALCFG_01719 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
GDCALCFG_01720 1.7e-201 K WYL domain
GDCALCFG_01721 4.9e-176 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
GDCALCFG_01722 3.5e-89 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GDCALCFG_01723 5.3e-22 tccB2 V DivIVA protein
GDCALCFG_01724 4.9e-45 yggT S YGGT family
GDCALCFG_01725 5.9e-69 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
GDCALCFG_01726 1.2e-211 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GDCALCFG_01727 2.2e-248 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GDCALCFG_01728 9.1e-294 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
GDCALCFG_01729 1.6e-115
GDCALCFG_01730 1.4e-133 cbiO V ATPases associated with a variety of cellular activities
GDCALCFG_01731 2.5e-94
GDCALCFG_01732 1.8e-60 marR5 K Winged helix DNA-binding domain
GDCALCFG_01733 4.2e-92
GDCALCFG_01734 2.4e-154 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
GDCALCFG_01735 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
GDCALCFG_01736 1.7e-229 O AAA domain (Cdc48 subfamily)
GDCALCFG_01737 3e-145 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
GDCALCFG_01738 4.7e-61 S Thiamine-binding protein
GDCALCFG_01739 6e-247 ydjK G Sugar (and other) transporter
GDCALCFG_01740 2.6e-213 2.7.13.3 T Histidine kinase
GDCALCFG_01741 6.1e-123 K helix_turn_helix, Lux Regulon
GDCALCFG_01742 4.5e-191
GDCALCFG_01743 1.3e-257 O SERine Proteinase INhibitors
GDCALCFG_01744 1.8e-195 K helix_turn _helix lactose operon repressor
GDCALCFG_01745 6.2e-241 lacY P LacY proton/sugar symporter
GDCALCFG_01746 3e-303 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
GDCALCFG_01747 3.2e-141 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
GDCALCFG_01748 2.5e-149 C Putative TM nitroreductase
GDCALCFG_01749 6.4e-198 S Glycosyltransferase, group 2 family protein
GDCALCFG_01750 1.3e-93 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GDCALCFG_01751 0.0 ecfA GP ABC transporter, ATP-binding protein
GDCALCFG_01752 3.1e-47 yhbY J CRS1_YhbY
GDCALCFG_01753 1.6e-53 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
GDCALCFG_01754 3.1e-52
GDCALCFG_01755 4.2e-186 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
GDCALCFG_01756 3.8e-252 EGP Major facilitator Superfamily
GDCALCFG_01757 3.3e-32 mtrB 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
GDCALCFG_01758 6.9e-11 KT Transcriptional regulatory protein, C terminal
GDCALCFG_01759 2.9e-249 rarA L Recombination factor protein RarA
GDCALCFG_01760 0.0 helY L DEAD DEAH box helicase
GDCALCFG_01761 4e-198 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
GDCALCFG_01762 4.6e-285 ydfD EK Alanine-glyoxylate amino-transferase
GDCALCFG_01763 6.6e-111 argO S LysE type translocator
GDCALCFG_01764 1e-287 phoN I PAP2 superfamily
GDCALCFG_01765 1.2e-194 gluD E Binding-protein-dependent transport system inner membrane component
GDCALCFG_01766 1.2e-110 gluC E Binding-protein-dependent transport system inner membrane component
GDCALCFG_01767 5.3e-147 gluB ET Belongs to the bacterial solute-binding protein 3 family
GDCALCFG_01768 8.9e-153 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
GDCALCFG_01769 6.1e-102 S Aminoacyl-tRNA editing domain
GDCALCFG_01770 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
GDCALCFG_01771 1.3e-260 hisS 6.1.1.21 J Histidyl-tRNA synthetase
GDCALCFG_01772 4.4e-224 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
GDCALCFG_01773 0.0 3.1.3.5 F 5'-nucleotidase, C-terminal domain
GDCALCFG_01774 9.6e-59 lipA I Hydrolase, alpha beta domain protein
GDCALCFG_01775 3.9e-132 xylE U Sugar (and other) transporter
GDCALCFG_01776 5.1e-26 K helix_turn_helix, arabinose operon control protein
GDCALCFG_01777 0.0 clpC O ATPase family associated with various cellular activities (AAA)
GDCALCFG_01778 1.2e-177 uspA T Belongs to the universal stress protein A family
GDCALCFG_01779 3.7e-180 S Protein of unknown function (DUF3027)
GDCALCFG_01780 2.9e-66 cspB K 'Cold-shock' DNA-binding domain
GDCALCFG_01781 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GDCALCFG_01782 2e-132 KT Response regulator receiver domain protein
GDCALCFG_01783 4.3e-99
GDCALCFG_01784 4.2e-33 S Proteins of 100 residues with WXG
GDCALCFG_01785 2.7e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
GDCALCFG_01786 6.1e-38 K 'Cold-shock' DNA-binding domain
GDCALCFG_01787 8.1e-85 S LytR cell envelope-related transcriptional attenuator
GDCALCFG_01788 3.8e-133 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GDCALCFG_01789 4.2e-187 moxR S ATPase family associated with various cellular activities (AAA)
GDCALCFG_01790 9.7e-164 S Protein of unknown function DUF58
GDCALCFG_01791 3.9e-85
GDCALCFG_01792 7.4e-189 S von Willebrand factor (vWF) type A domain
GDCALCFG_01793 1e-153 S von Willebrand factor (vWF) type A domain
GDCALCFG_01794 3.4e-55
GDCALCFG_01795 1.2e-254 S PGAP1-like protein
GDCALCFG_01796 1.3e-111 ykoE S ABC-type cobalt transport system, permease component
GDCALCFG_01797 3.3e-280 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
GDCALCFG_01798 0.0 S Lysylphosphatidylglycerol synthase TM region
GDCALCFG_01799 8.1e-42 hup L Belongs to the bacterial histone-like protein family
GDCALCFG_01800 3e-284 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
GDCALCFG_01802 8.9e-175 hisN 3.1.3.25 G Inositol monophosphatase family
GDCALCFG_01803 0.0 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
GDCALCFG_01804 6.6e-130 alsE 5.1.3.1 G Ribulose-phosphate 3 epimerase family
GDCALCFG_01805 1.6e-102 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GDCALCFG_01806 4e-287 arc O AAA ATPase forming ring-shaped complexes
GDCALCFG_01807 1.9e-124 apl 3.1.3.1 S SNARE associated Golgi protein
GDCALCFG_01808 2.1e-118 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
GDCALCFG_01809 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GDCALCFG_01810 1.6e-131 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GDCALCFG_01811 1.6e-188 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GDCALCFG_01812 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
GDCALCFG_01813 4.2e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
GDCALCFG_01814 4.7e-227 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GDCALCFG_01815 3.7e-54 L Transposase
GDCALCFG_01816 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GDCALCFG_01817 4.3e-151 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GDCALCFG_01818 4.7e-162 dcuD C C4-dicarboxylate anaerobic carrier
GDCALCFG_01819 2.6e-105 rihB 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
GDCALCFG_01820 2.4e-43 K acetyltransferase
GDCALCFG_01821 2.7e-127 rbsR K helix_turn _helix lactose operon repressor
GDCALCFG_01822 0.0 V ABC transporter transmembrane region
GDCALCFG_01823 0.0 V ABC transporter, ATP-binding protein
GDCALCFG_01824 1.2e-89 K MarR family
GDCALCFG_01825 7e-176 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
GDCALCFG_01826 5.8e-238 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
GDCALCFG_01827 2.6e-70 S Nucleotidyltransferase substrate binding protein like
GDCALCFG_01828 1.2e-45 S Nucleotidyltransferase domain
GDCALCFG_01830 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
GDCALCFG_01831 2.1e-142 K Bacterial regulatory proteins, tetR family
GDCALCFG_01832 5.5e-255 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
GDCALCFG_01833 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
GDCALCFG_01834 6.5e-136 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GDCALCFG_01835 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
GDCALCFG_01836 4.1e-256 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GDCALCFG_01837 3.5e-40 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GDCALCFG_01838 5.1e-91 ywrO 1.6.5.2 S Flavodoxin-like fold
GDCALCFG_01839 0.0 fadD 6.2.1.3 I AMP-binding enzyme
GDCALCFG_01840 3.2e-65 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GDCALCFG_01841 3.7e-78 F Nucleoside 2-deoxyribosyltransferase
GDCALCFG_01843 1.6e-200 S Endonuclease/Exonuclease/phosphatase family
GDCALCFG_01844 4.9e-179 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
GDCALCFG_01845 3.3e-233 aspB E Aminotransferase class-V
GDCALCFG_01846 8.5e-201 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
GDCALCFG_01847 7.4e-88 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
GDCALCFG_01848 1.2e-100 XK27_03610 K Acetyltransferase (GNAT) domain
GDCALCFG_01849 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
GDCALCFG_01850 9.8e-146 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
GDCALCFG_01851 2.4e-250 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
GDCALCFG_01852 6e-151 map 3.4.11.18 E Methionine aminopeptidase
GDCALCFG_01853 6.7e-143 S Short repeat of unknown function (DUF308)
GDCALCFG_01854 0.0 pepO 3.4.24.71 O Peptidase family M13
GDCALCFG_01855 2.2e-117 L Single-strand binding protein family
GDCALCFG_01856 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
GDCALCFG_01857 1.1e-156 pflA 1.97.1.4 O Radical SAM superfamily
GDCALCFG_01858 9e-71 L Transposase, Mutator family
GDCALCFG_01859 1.2e-178 menD 2.2.1.9 H Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
GDCALCFG_01860 1.3e-46 M Glycosyltransferase like family 2
GDCALCFG_01861 2.9e-119 S Psort location CytoplasmicMembrane, score 9.99
GDCALCFG_01862 8.9e-63 C Polysaccharide pyruvyl transferase
GDCALCFG_01863 1.5e-07
GDCALCFG_01864 1.7e-52 GT4 M Psort location Cytoplasmic, score 8.87
GDCALCFG_01865 2e-139 M Psort location Cytoplasmic, score 8.87
GDCALCFG_01866 9.5e-187 L Transposase and inactivated derivatives IS30 family
GDCALCFG_01868 3.9e-113 S Psort location CytoplasmicMembrane, score 9.99
GDCALCFG_01869 3.3e-109 3.1.3.48 T Low molecular weight phosphatase family
GDCALCFG_01870 1.1e-09
GDCALCFG_01871 4.3e-40 L Transposase, Mutator family
GDCALCFG_01872 3.2e-105 K Bacterial regulatory proteins, tetR family
GDCALCFG_01873 2.3e-256 MA20_36090 S Psort location Cytoplasmic, score 8.87
GDCALCFG_01874 3.6e-85 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
GDCALCFG_01875 4.4e-80 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
GDCALCFG_01876 2.1e-75 ams 2.4.1.4, 3.2.1.1, 5.4.99.16 GH13 G Alpha amylase, catalytic domain
GDCALCFG_01877 5.7e-113 P Sodium/hydrogen exchanger family
GDCALCFG_01880 2.8e-81
GDCALCFG_01881 0.0 Q von Willebrand factor (vWF) type A domain
GDCALCFG_01882 1.5e-278 M LPXTG cell wall anchor motif
GDCALCFG_01883 3.8e-87
GDCALCFG_01884 7.6e-110
GDCALCFG_01885 1e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GDCALCFG_01886 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
GDCALCFG_01887 1.2e-74 V ABC transporter, ATP-binding protein
GDCALCFG_01888 5.3e-31 V ABC transporter, ATP-binding protein
GDCALCFG_01889 1.3e-59 macB_7 V FtsX-like permease family
GDCALCFG_01890 2.4e-88 lemA S LemA family
GDCALCFG_01891 0.0 S Predicted membrane protein (DUF2207)
GDCALCFG_01892 1.9e-10 S Predicted membrane protein (DUF2207)
GDCALCFG_01893 6.1e-202 S Predicted membrane protein (DUF2207)
GDCALCFG_01894 2.5e-13
GDCALCFG_01895 2.4e-169 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
GDCALCFG_01896 2.5e-234 rfbP 2.7.8.6 M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
GDCALCFG_01897 0.0 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
GDCALCFG_01898 7.3e-281 EGP Major facilitator Superfamily
GDCALCFG_01899 1e-235 mntH P H( )-stimulated, divalent metal cation uptake system
GDCALCFG_01900 1.9e-141 L Protein of unknown function (DUF1524)
GDCALCFG_01901 5.2e-85 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
GDCALCFG_01902 6.3e-188 K helix_turn _helix lactose operon repressor
GDCALCFG_01903 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GDCALCFG_01904 8.8e-119 K Bacterial regulatory proteins, luxR family
GDCALCFG_01905 5.5e-220 T Histidine kinase
GDCALCFG_01906 3.2e-251 V Efflux ABC transporter, permease protein
GDCALCFG_01907 2.3e-162 V ABC transporter
GDCALCFG_01909 4.8e-48 S Protein of unknown function (DUF2089)
GDCALCFG_01910 2.2e-49
GDCALCFG_01911 5.5e-71 K Transcriptional regulator
GDCALCFG_01912 7.9e-109
GDCALCFG_01913 1.3e-38 K sequence-specific DNA binding
GDCALCFG_01914 3.4e-53 hipA 2.7.11.1 S kinase activity
GDCALCFG_01915 4.4e-42 2.6.1.76 EGP Major Facilitator Superfamily
GDCALCFG_01916 6.3e-20 G Major facilitator Superfamily
GDCALCFG_01917 1.4e-295 mmuP E amino acid
GDCALCFG_01919 1e-62 yeaO K Protein of unknown function, DUF488
GDCALCFG_01920 5.3e-77
GDCALCFG_01921 1.9e-173 3.6.4.12
GDCALCFG_01922 4e-65 yijF S Domain of unknown function (DUF1287)
GDCALCFG_01923 9.9e-299 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
GDCALCFG_01924 1.2e-70 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
GDCALCFG_01925 6.1e-140 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
GDCALCFG_01926 3.6e-76 3.5.1.124 S DJ-1/PfpI family
GDCALCFG_01927 1.3e-223 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
GDCALCFG_01928 3.7e-174 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
GDCALCFG_01929 2.6e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
GDCALCFG_01930 2.8e-134 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
GDCALCFG_01931 1.4e-145 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GDCALCFG_01932 5.8e-144 rpsB J Belongs to the universal ribosomal protein uS2 family
GDCALCFG_01933 1.7e-87 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GDCALCFG_01934 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
GDCALCFG_01935 3.3e-91
GDCALCFG_01936 1.5e-208 guaB 1.1.1.205 F IMP dehydrogenase family protein
GDCALCFG_01937 2.3e-242 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
GDCALCFG_01938 2e-257 G ABC transporter substrate-binding protein
GDCALCFG_01939 3.6e-87 M Peptidase family M23
GDCALCFG_01941 7.1e-167 xerH L Phage integrase family
GDCALCFG_01943 2.8e-134 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
GDCALCFG_01944 6e-87 K Psort location Cytoplasmic, score
GDCALCFG_01945 2.3e-29 S Fic/DOC family
GDCALCFG_01949 4.8e-58 ard S Antirestriction protein (ArdA)
GDCALCFG_01950 1e-08
GDCALCFG_01951 1.3e-84 M G5 domain protein
GDCALCFG_01952 7.7e-68
GDCALCFG_01955 1.4e-242 topB 5.99.1.2 L DNA topoisomerase
GDCALCFG_01958 1.8e-15 K Bacterial mobilisation protein (MobC)
GDCALCFG_01959 4.1e-33 ecoRIIR 3.1.21.4 L EcoRII C terminal
GDCALCFG_01960 4.1e-144 S Fic/DOC family
GDCALCFG_01961 2.4e-136 L PFAM Relaxase mobilization nuclease family protein
GDCALCFG_01962 4.5e-87 2.7.11.1 S HipA-like C-terminal domain
GDCALCFG_01964 1.1e-39
GDCALCFG_01965 2.5e-50 S Domain of unknown function (DUF4913)
GDCALCFG_01966 1.6e-231 U TraM recognition site of TraD and TraG
GDCALCFG_01967 2.5e-22
GDCALCFG_01968 1.7e-07
GDCALCFG_01971 8.9e-202 traD S COG0433 Predicted ATPase
GDCALCFG_01972 4.9e-186
GDCALCFG_01973 7.6e-142
GDCALCFG_01974 1.7e-29
GDCALCFG_01975 9.1e-33
GDCALCFG_01976 2.2e-06
GDCALCFG_01977 8e-21
GDCALCFG_01978 0.0 XK27_00515 D Cell surface antigen C-terminus
GDCALCFG_01979 8.5e-38
GDCALCFG_01980 4.4e-253 U Spy0128-like isopeptide containing domain
GDCALCFG_01981 3.1e-38
GDCALCFG_01982 4.5e-49
GDCALCFG_01983 3.4e-22
GDCALCFG_01985 8e-31 parA D VirC1 protein
GDCALCFG_01988 4.4e-16 S Transcription factor WhiB
GDCALCFG_01989 7.5e-16 S Helix-turn-helix domain
GDCALCFG_01995 2.7e-17
GDCALCFG_01997 1.2e-194 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GDCALCFG_01998 4.2e-104 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
GDCALCFG_01999 2.3e-159 yeaZ 2.3.1.234 O Glycoprotease family
GDCALCFG_02000 4e-88 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
GDCALCFG_02001 9e-173 holA 2.7.7.7 L DNA polymerase III delta subunit
GDCALCFG_02002 1.2e-310 comE S Competence protein
GDCALCFG_02003 1.5e-81 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
GDCALCFG_02004 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
GDCALCFG_02005 2.7e-160 ET Bacterial periplasmic substrate-binding proteins
GDCALCFG_02006 1.5e-169 corA P CorA-like Mg2+ transporter protein
GDCALCFG_02007 1.6e-165 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
GDCALCFG_02008 4.5e-233 L ribosomal rna small subunit methyltransferase
GDCALCFG_02009 4.1e-71 pdxH S Pfam:Pyridox_oxidase
GDCALCFG_02010 1.7e-168 EG EamA-like transporter family
GDCALCFG_02011 2.1e-131 C Putative TM nitroreductase
GDCALCFG_02012 8.5e-32
GDCALCFG_02013 3.3e-255 S Metal-independent alpha-mannosidase (GH125)
GDCALCFG_02014 1.7e-237 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
GDCALCFG_02015 4.9e-207 K helix_turn _helix lactose operon repressor
GDCALCFG_02016 0.0 3.2.1.96 G Glycosyl hydrolase family 85
GDCALCFG_02017 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
GDCALCFG_02018 1.9e-263 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
GDCALCFG_02019 5.2e-156 lacG G Binding-protein-dependent transport system inner membrane component
GDCALCFG_02020 4.3e-172 malC G Binding-protein-dependent transport system inner membrane component
GDCALCFG_02021 3e-245 srrA1 G Bacterial extracellular solute-binding protein
GDCALCFG_02022 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
GDCALCFG_02023 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
GDCALCFG_02024 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
GDCALCFG_02025 1e-15 L Phage integrase family
GDCALCFG_02027 7.5e-183 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
GDCALCFG_02028 2.2e-102 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
GDCALCFG_02029 6.6e-70 divIC D Septum formation initiator
GDCALCFG_02030 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GDCALCFG_02031 9e-175 1.1.1.65 C Aldo/keto reductase family
GDCALCFG_02032 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GDCALCFG_02033 1.5e-114 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
GDCALCFG_02034 3.5e-92 2.3.1.183 M Acetyltransferase (GNAT) domain
GDCALCFG_02035 0.0 S Uncharacterised protein family (UPF0182)
GDCALCFG_02036 1.9e-23 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
GDCALCFG_02037 6.3e-91 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
GDCALCFG_02038 3.2e-138 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GDCALCFG_02039 3e-96
GDCALCFG_02040 7.9e-233 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
GDCALCFG_02041 2.1e-282 thrC 4.2.3.1 E Threonine synthase N terminus
GDCALCFG_02042 2.2e-09 S Psort location Cytoplasmic, score
GDCALCFG_02043 1.8e-70 S ABC-2 family transporter protein
GDCALCFG_02044 1.7e-120 S ABC-2 family transporter protein
GDCALCFG_02045 1.1e-172 V ATPases associated with a variety of cellular activities
GDCALCFG_02046 4.8e-58 K helix_turn_helix gluconate operon transcriptional repressor
GDCALCFG_02047 4.7e-23 J Acetyltransferase (GNAT) domain
GDCALCFG_02048 1.9e-11 J Acetyltransferase (GNAT) domain
GDCALCFG_02049 3.6e-117 S Haloacid dehalogenase-like hydrolase
GDCALCFG_02050 0.0 recN L May be involved in recombinational repair of damaged DNA
GDCALCFG_02051 5.1e-184 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GDCALCFG_02052 8.3e-12 trkB P Cation transport protein
GDCALCFG_02053 4e-69 trkA P TrkA-N domain
GDCALCFG_02054 4.7e-96
GDCALCFG_02055 2.7e-140 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
GDCALCFG_02057 3.2e-200 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
GDCALCFG_02058 5.1e-169 L Tetratricopeptide repeat
GDCALCFG_02059 2.6e-255 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GDCALCFG_02060 2.8e-83 S Protein of unknown function (DUF975)
GDCALCFG_02061 7.4e-138 S Putative ABC-transporter type IV
GDCALCFG_02062 4.6e-102 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
GDCALCFG_02063 6.8e-71 M1-798 P Rhodanese Homology Domain
GDCALCFG_02064 1.3e-145 moeB 2.7.7.80 H ThiF family
GDCALCFG_02065 1.8e-156 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
GDCALCFG_02066 7.9e-28 thiS 2.8.1.10 H ThiS family
GDCALCFG_02067 4.4e-280 argH 4.3.2.1 E argininosuccinate lyase
GDCALCFG_02068 2.4e-32 relB L RelB antitoxin
GDCALCFG_02069 1.1e-43 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
GDCALCFG_02070 3.9e-31 L PFAM Integrase catalytic
GDCALCFG_02071 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
GDCALCFG_02072 1.5e-59 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
GDCALCFG_02073 3.8e-165 lepB 3.4.21.89 U Belongs to the peptidase S26 family
GDCALCFG_02074 6.5e-159 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GDCALCFG_02075 5.6e-211 K helix_turn _helix lactose operon repressor
GDCALCFG_02076 0.0 fadD 6.2.1.3 I AMP-binding enzyme
GDCALCFG_02077 1.7e-38 araE EGP Major facilitator Superfamily
GDCALCFG_02078 8.3e-20 araE EGP Major facilitator Superfamily
GDCALCFG_02079 0.0 cydD V ABC transporter transmembrane region
GDCALCFG_02080 1.6e-27 araE EGP Major facilitator Superfamily
GDCALCFG_02081 1.6e-260 G Bacterial extracellular solute-binding protein
GDCALCFG_02082 8.5e-265 abcT3 P ATPases associated with a variety of cellular activities
GDCALCFG_02083 0.0 pgi 5.3.1.9 G Belongs to the GPI family
GDCALCFG_02086 6.2e-177 S Auxin Efflux Carrier
GDCALCFG_02087 8.3e-129 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GDCALCFG_02088 1.1e-144 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
GDCALCFG_02089 2.3e-248 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GDCALCFG_02090 3.7e-119
GDCALCFG_02091 6.3e-78 soxR K MerR, DNA binding
GDCALCFG_02092 4.3e-194 yghZ C Aldo/keto reductase family
GDCALCFG_02093 1.8e-47 S Protein of unknown function (DUF3039)
GDCALCFG_02094 6e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GDCALCFG_02095 2.1e-79
GDCALCFG_02096 6.1e-114 yceD S Uncharacterized ACR, COG1399
GDCALCFG_02097 9.3e-21 rpmF J Belongs to the bacterial ribosomal protein bL32 family
GDCALCFG_02098 9.7e-135 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
GDCALCFG_02099 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
GDCALCFG_02100 4e-93 ilvN 2.2.1.6 E ACT domain
GDCALCFG_02101 3.9e-44 stbC S Plasmid stability protein
GDCALCFG_02102 2.1e-73 vapC S Toxic component of a toxin-antitoxin (TA) module. An RNase
GDCALCFG_02103 0.0 yjjK S ABC transporter
GDCALCFG_02104 1.1e-135 guaA1 6.3.5.2 F Peptidase C26
GDCALCFG_02105 0.0 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
GDCALCFG_02106 5.6e-161 P Cation efflux family
GDCALCFG_02107 6.9e-266 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GDCALCFG_02108 2.7e-204 S Endonuclease/Exonuclease/phosphatase family
GDCALCFG_02109 2.9e-57 rpsP J Belongs to the bacterial ribosomal protein bS16 family
GDCALCFG_02110 1e-34 CP_0960 S Belongs to the UPF0109 family
GDCALCFG_02111 2.2e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GDCALCFG_02112 2.5e-200 iunH1 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
GDCALCFG_02113 5.7e-84 2.7.7.49 L Transposase, Mutator family
GDCALCFG_02114 6.9e-56 L Transposase, Mutator family
GDCALCFG_02115 6.8e-67
GDCALCFG_02116 1.4e-86
GDCALCFG_02117 5e-21 L PFAM Integrase catalytic
GDCALCFG_02118 1.4e-10 L HTH-like domain
GDCALCFG_02120 3.9e-07
GDCALCFG_02121 7.7e-202 L Phage integrase, N-terminal SAM-like domain
GDCALCFG_02122 5.9e-193 L Phage integrase family
GDCALCFG_02123 3.5e-227 xerC_1 L Belongs to the 'phage' integrase family
GDCALCFG_02124 3.3e-25 L Transposase and inactivated derivatives IS30 family
GDCALCFG_02125 9.8e-53
GDCALCFG_02128 4.1e-144 L IstB-like ATP binding protein
GDCALCFG_02129 5.8e-296 L PFAM Integrase catalytic
GDCALCFG_02130 4.2e-44 L PFAM Integrase catalytic
GDCALCFG_02131 3.6e-148 L IstB-like ATP binding protein
GDCALCFG_02132 9.8e-296 L PFAM Integrase catalytic

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)