ORF_ID | e_value | Gene_name | EC_number | CAZy | COGs | Description |
---|---|---|---|---|---|---|
LIDPMHCK_00001 | 4.4e-42 | G | ABC transporter permease | |||
LIDPMHCK_00002 | 0.0 | lacZ5 | 3.2.1.23 | G | Psort location Cytoplasmic, score 8.87 | |
LIDPMHCK_00003 | 2.6e-255 | G | Bacterial extracellular solute-binding protein | |||
LIDPMHCK_00004 | 9.7e-277 | G | Bacterial extracellular solute-binding protein | |||
LIDPMHCK_00005 | 4.5e-143 | coaX | 2.7.1.33 | H | Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis | |
LIDPMHCK_00006 | 7.2e-292 | E | ABC transporter, substrate-binding protein, family 5 | |||
LIDPMHCK_00007 | 7.4e-167 | P | Binding-protein-dependent transport system inner membrane component | |||
LIDPMHCK_00008 | 1.1e-146 | EP | Binding-protein-dependent transport system inner membrane component | |||
LIDPMHCK_00009 | 5.5e-136 | oppD | EP | oligopeptide transport protein of the ABC superfamily, ATP-binding component | ||
LIDPMHCK_00010 | 2.4e-136 | sapF | E | ATPases associated with a variety of cellular activities | ||
LIDPMHCK_00011 | 3.1e-192 | cbs | 2.5.1.47, 4.2.1.22 | E | Pyridoxal-phosphate dependent enzyme | |
LIDPMHCK_00012 | 2.4e-220 | metB | 2.5.1.48, 4.4.1.1, 4.4.1.8 | E | Cys/Met metabolism PLP-dependent enzyme | |
LIDPMHCK_00013 | 0.0 | recQ | 3.6.4.12 | L | ATP-dependent DNA helicase RecQ | |
LIDPMHCK_00014 | 2.7e-93 | luxS | 4.4.1.21 | H | Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD) | |
LIDPMHCK_00015 | 6.5e-104 | cysE | 2.3.1.178 | J | COG1670 acetyltransferases, including N-acetylases of ribosomal proteins | |
LIDPMHCK_00016 | 4.3e-272 | yhdG | E | aromatic amino acid transport protein AroP K03293 | ||
LIDPMHCK_00017 | 1.5e-263 | alr | 5.1.1.1 | M | Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids | |
LIDPMHCK_00018 | 3.1e-245 | dgt | 3.1.5.1 | F | Phosphohydrolase-associated domain | |
LIDPMHCK_00019 | 0.0 | dnaG | L | RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication | ||
LIDPMHCK_00020 | 6.9e-156 | pdxS | 4.3.3.6 | H | Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively | |
LIDPMHCK_00021 | 1.1e-115 | pdxT | 4.3.3.6 | H | Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS | |
LIDPMHCK_00022 | 4.2e-294 | EK | Alanine-glyoxylate amino-transferase | |||
LIDPMHCK_00023 | 1.5e-209 | ybiR | P | Citrate transporter | ||
LIDPMHCK_00024 | 3.3e-30 | |||||
LIDPMHCK_00025 | 3.5e-42 | G | Alpha-L-arabinofuranosidase C-terminal domain | |||
LIDPMHCK_00026 | 2.3e-159 | K | Helix-turn-helix domain, rpiR family | |||
LIDPMHCK_00029 | 8.8e-256 | G | Bacterial extracellular solute-binding protein | |||
LIDPMHCK_00030 | 9.9e-225 | K | helix_turn _helix lactose operon repressor | |||
LIDPMHCK_00031 | 0.0 | 3.2.1.10 | GH13 | G | Alpha amylase, catalytic domain protein | |
LIDPMHCK_00032 | 1.7e-12 | L | Psort location Cytoplasmic, score 8.87 | |||
LIDPMHCK_00033 | 0.0 | E | ABC transporter, substrate-binding protein, family 5 | |||
LIDPMHCK_00034 | 6.1e-85 | msrA | 1.8.4.11, 1.8.4.12 | O | peptide-methionine (S)-S-oxide reductase activity | |
LIDPMHCK_00035 | 2.1e-135 | V | ATPases associated with a variety of cellular activities | |||
LIDPMHCK_00036 | 1.4e-173 | M | Conserved repeat domain | |||
LIDPMHCK_00037 | 5.6e-278 | macB_8 | V | MacB-like periplasmic core domain | ||
LIDPMHCK_00038 | 0.0 | dxs | 2.2.1.7 | H | Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) | |
LIDPMHCK_00039 | 2.4e-181 | adh3 | C | Zinc-binding dehydrogenase | ||
LIDPMHCK_00040 | 5.2e-84 | purE | 5.4.99.18 | F | Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) | |
LIDPMHCK_00041 | 1.1e-222 | purK | 6.3.4.18 | F | Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) | |
LIDPMHCK_00042 | 2.6e-68 | zur | P | Belongs to the Fur family | ||
LIDPMHCK_00043 | 1.5e-84 | ylbB | V | FtsX-like permease family | ||
LIDPMHCK_00044 | 2.2e-27 | ylbB | V | FtsX-like permease family | ||
LIDPMHCK_00045 | 1.1e-70 | XK27_06785 | V | ABC transporter | ||
LIDPMHCK_00046 | 7.1e-64 | |||||
LIDPMHCK_00047 | 6.8e-84 | zur | P | Ferric uptake regulator family | ||
LIDPMHCK_00048 | 7.8e-140 | S | TIGRFAM TIGR03943 family protein | |||
LIDPMHCK_00049 | 9.1e-169 | ycgR | S | Predicted permease | ||
LIDPMHCK_00050 | 2.3e-25 | adcA | P | ZinT (YodA) periplasmic lipocalin-like zinc-recruitment | ||
LIDPMHCK_00051 | 1.3e-18 | J | Ribosomal L32p protein family | |||
LIDPMHCK_00052 | 1.1e-14 | rpmJ | J | Ribosomal protein L36 | ||
LIDPMHCK_00053 | 4.4e-34 | rpmE2 | J | Ribosomal protein L31 | ||
LIDPMHCK_00054 | 2.5e-44 | rpsN | J | Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site | ||
LIDPMHCK_00055 | 1.4e-20 | rpmG | J | Ribosomal protein L33 | ||
LIDPMHCK_00056 | 3.9e-29 | rpmB | J | Ribosomal L28 family | ||
LIDPMHCK_00057 | 1.5e-98 | S | cobalamin synthesis protein | |||
LIDPMHCK_00058 | 2.1e-155 | P | Zinc-uptake complex component A periplasmic | |||
LIDPMHCK_00059 | 0.0 | XK27_08315 | M | Psort location CytoplasmicMembrane, score 9.26 | ||
LIDPMHCK_00060 | 4.9e-298 | aldH | 1.2.1.3, 1.2.1.5 | C | Aldehyde dehydrogenase family | |
LIDPMHCK_00061 | 3.7e-243 | purD | 6.3.4.13 | F | Belongs to the GARS family | |
LIDPMHCK_00062 | 2.1e-183 | purM | 6.3.3.1, 6.3.4.13 | F | Phosphoribosylformylglycinamidine cyclo-ligase | |
LIDPMHCK_00063 | 9.3e-294 | purF | 2.4.2.14 | F | Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine | |
LIDPMHCK_00064 | 3e-290 | umuC | 2.7.7.7 | L | DNA-damage repair protein (DNA polymerase IV) K00961 | |
LIDPMHCK_00065 | 3.5e-32 | |||||
LIDPMHCK_00066 | 3.7e-12 | C | Aldo/keto reductase family | |||
LIDPMHCK_00067 | 1.4e-101 | mug | 3.2.2.28 | L | Uracil DNA glycosylase superfamily | |
LIDPMHCK_00068 | 7.8e-112 | Q | D-alanine [D-alanyl carrier protein] ligase activity | |||
LIDPMHCK_00069 | 1.6e-260 | Q | D-alanine [D-alanyl carrier protein] ligase activity | |||
LIDPMHCK_00070 | 9e-240 | I | alpha/beta hydrolase fold | |||
LIDPMHCK_00071 | 0.0 | purL | 6.3.5.3 | F | CobB/CobQ-like glutamine amidotransferase domain | |
LIDPMHCK_00072 | 3.6e-137 | purC | 4.1.1.21, 4.3.2.2, 6.3.2.6 | F | Belongs to the SAICAR synthetase family | |
LIDPMHCK_00073 | 8.2e-222 | purT | 2.1.2.2 | F | Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate | |
LIDPMHCK_00074 | 2.3e-229 | mtnE | 2.6.1.83 | E | Aminotransferase class I and II | |
LIDPMHCK_00075 | 9.9e-219 | M | Glycosyl transferase 4-like domain | |||
LIDPMHCK_00076 | 2.3e-195 | ltaE | 4.1.2.48 | E | Beta-eliminating lyase | |
LIDPMHCK_00078 | 6.6e-111 | yocS | S | SBF-like CPA transporter family (DUF4137) | ||
LIDPMHCK_00079 | 9.3e-62 | rpsL | J | Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit | ||
LIDPMHCK_00080 | 3.3e-80 | rpsG | J | One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA | ||
LIDPMHCK_00081 | 0.0 | fusA | J | Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome | ||
LIDPMHCK_00082 | 6.2e-232 | tuf | J | This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis | ||
LIDPMHCK_00083 | 3.5e-129 | tmp1 | S | Domain of unknown function (DUF4391) | ||
LIDPMHCK_00084 | 2.3e-145 | rlrG | K | Bacterial regulatory helix-turn-helix protein, lysR family | ||
LIDPMHCK_00085 | 2.7e-186 | MA20_14895 | S | Conserved hypothetical protein 698 | ||
LIDPMHCK_00086 | 6.3e-21 | S | Psort location CytoplasmicMembrane, score | |||
LIDPMHCK_00087 | 1.2e-28 | S | polysaccharide biosynthetic process | |||
LIDPMHCK_00088 | 1.3e-60 | crcB | U | Important for reducing fluoride concentration in the cell, thus reducing its toxicity | ||
LIDPMHCK_00089 | 1.7e-85 | D | Important for reducing fluoride concentration in the cell, thus reducing its toxicity | |||
LIDPMHCK_00090 | 6.4e-67 | K | MerR family regulatory protein | |||
LIDPMHCK_00091 | 1.2e-196 | 1.1.1.1, 1.1.1.14 | C | Zinc-binding dehydrogenase | ||
LIDPMHCK_00092 | 3.9e-259 | S | Domain of unknown function (DUF4143) | |||
LIDPMHCK_00093 | 3.4e-109 | P | Protein of unknown function DUF47 | |||
LIDPMHCK_00094 | 6.4e-170 | ugpQ | 3.1.4.46 | C | Domain of unknown function | |
LIDPMHCK_00095 | 2.6e-239 | ugpB | G | Bacterial extracellular solute-binding protein | ||
LIDPMHCK_00096 | 8.9e-142 | ugpE | G | Binding-protein-dependent transport system inner membrane component | ||
LIDPMHCK_00097 | 3.5e-164 | ugpA | P | Binding-protein-dependent transport system inner membrane component | ||
LIDPMHCK_00098 | 1.5e-140 | P | Phosphate transporter family | |||
LIDPMHCK_00099 | 1.3e-190 | K | helix_turn _helix lactose operon repressor | |||
LIDPMHCK_00100 | 1.5e-144 | K | LysR substrate binding domain | |||
LIDPMHCK_00101 | 1.7e-101 | K | LysR substrate binding domain | |||
LIDPMHCK_00102 | 0.0 | uvrA3 | L | The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate | ||
LIDPMHCK_00103 | 1.4e-240 | vbsD | V | MatE |
eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)