ORF_ID e_value Gene_name EC_number CAZy COGs Description
JAPFAENF_00001 1.8e-40
JAPFAENF_00002 7.7e-279 pip S YhgE Pip domain protein
JAPFAENF_00003 0.0 pip S YhgE Pip domain protein
JAPFAENF_00004 1.1e-138 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
JAPFAENF_00005 1.2e-59 S Protein of unknown function (DUF4235)
JAPFAENF_00006 3.6e-102 G Phosphoglycerate mutase family
JAPFAENF_00007 7.9e-252 amyE G Bacterial extracellular solute-binding protein
JAPFAENF_00008 3.7e-185 K Psort location Cytoplasmic, score
JAPFAENF_00009 4.4e-147 malC G Binding-protein-dependent transport system inner membrane component
JAPFAENF_00010 6.8e-153 rafG G ABC transporter permease
JAPFAENF_00011 6.5e-105 S Protein of unknown function, DUF624
JAPFAENF_00012 1.3e-268 aroP E aromatic amino acid transport protein AroP K03293
JAPFAENF_00013 7.5e-129 V ABC transporter
JAPFAENF_00014 0.0 V FtsX-like permease family
JAPFAENF_00015 9.5e-278 cycA E Amino acid permease
JAPFAENF_00016 1.3e-90 ydgJ K helix_turn_helix multiple antibiotic resistance protein
JAPFAENF_00017 0.0 lmrA1 V ABC transporter, ATP-binding protein
JAPFAENF_00018 0.0 lmrA2 V ABC transporter transmembrane region
JAPFAENF_00019 2.4e-178 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
JAPFAENF_00020 3.3e-256 G MFS/sugar transport protein
JAPFAENF_00022 9.1e-184 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JAPFAENF_00023 2.8e-13
JAPFAENF_00024 9.4e-121
JAPFAENF_00025 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JAPFAENF_00026 2.5e-46
JAPFAENF_00027 8e-277 pepC 3.4.22.40 E Peptidase C1-like family
JAPFAENF_00028 7.9e-177 appB EP Binding-protein-dependent transport system inner membrane component
JAPFAENF_00029 6e-172 dppC EP N-terminal TM domain of oligopeptide transport permease C
JAPFAENF_00030 0.0 oppD P Belongs to the ABC transporter superfamily
JAPFAENF_00031 0.0 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
JAPFAENF_00032 3.3e-248 EGP Major Facilitator Superfamily
JAPFAENF_00033 1.5e-266 S AAA domain
JAPFAENF_00035 1.1e-269 S ATPase domain predominantly from Archaea
JAPFAENF_00036 0.0 mdlA2 V ABC transporter
JAPFAENF_00037 0.0 yknV V ABC transporter
JAPFAENF_00038 5.9e-185 tatD L TatD related DNase
JAPFAENF_00039 0.0 kup P Transport of potassium into the cell
JAPFAENF_00040 1.8e-159 S Glutamine amidotransferase domain
JAPFAENF_00041 5.3e-144 T HD domain
JAPFAENF_00042 4e-183 V ABC transporter
JAPFAENF_00043 1e-257 V ABC transporter permease
JAPFAENF_00044 3.8e-225 K Cell envelope-related transcriptional attenuator domain
JAPFAENF_00045 3.4e-163 lytC 3.1.4.46, 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
JAPFAENF_00046 5.6e-172 rfbJ M Glycosyl transferase family 2
JAPFAENF_00047 0.0
JAPFAENF_00048 2.9e-206 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
JAPFAENF_00049 1.9e-288 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
JAPFAENF_00050 1e-170 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
JAPFAENF_00051 3.6e-185 M Glycosyltransferase like family 2
JAPFAENF_00052 0.0 rgpF M Rhamnan synthesis protein F
JAPFAENF_00053 7.4e-144 rgpC U Transport permease protein
JAPFAENF_00054 1.3e-235 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
JAPFAENF_00055 2.2e-287 lsgC M transferase activity, transferring glycosyl groups
JAPFAENF_00056 4.7e-221 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
JAPFAENF_00057 1.2e-176 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
JAPFAENF_00058 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
JAPFAENF_00059 2e-242 S Predicted membrane protein (DUF2142)
JAPFAENF_00060 2.9e-201 M Glycosyltransferase like family 2
JAPFAENF_00061 7.7e-235 glf 5.4.99.9 M UDP-galactopyranose mutase
JAPFAENF_00062 2.3e-162
JAPFAENF_00063 3.1e-117 S Domain of unknown function (DUF4190)
JAPFAENF_00064 4e-158 fahA Q Fumarylacetoacetate (FAA) hydrolase family
JAPFAENF_00065 6.2e-163 S Auxin Efflux Carrier
JAPFAENF_00066 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
JAPFAENF_00068 2.3e-217 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
JAPFAENF_00069 2.6e-216 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
JAPFAENF_00070 2.8e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
JAPFAENF_00071 3.9e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
JAPFAENF_00072 8.5e-129 K helix_turn _helix lactose operon repressor
JAPFAENF_00073 1.7e-208 G Bacterial extracellular solute-binding protein
JAPFAENF_00074 4.4e-209 U Binding-protein-dependent transport system inner membrane component
JAPFAENF_00075 2.7e-139 P Binding-protein-dependent transport system inner membrane component
JAPFAENF_00076 0.0 G N-terminal domain of (some) glycogen debranching enzymes
JAPFAENF_00077 8.5e-132
JAPFAENF_00078 5e-233 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
JAPFAENF_00079 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
JAPFAENF_00080 7.6e-263 S Calcineurin-like phosphoesterase
JAPFAENF_00081 2.2e-140 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
JAPFAENF_00082 1.3e-273 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
JAPFAENF_00083 3.2e-132 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
JAPFAENF_00084 2.5e-19 S Bacterial PH domain
JAPFAENF_00085 1.1e-20 2.7.13.3 T Histidine kinase
JAPFAENF_00086 1.8e-220 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
JAPFAENF_00087 1.3e-131 yxeO 3.6.3.21 E ATPases associated with a variety of cellular activities
JAPFAENF_00088 3.5e-105 S L-2-amino-thiazoline-4-carboxylic acid hydrolase
JAPFAENF_00089 3.6e-140 P Binding-protein-dependent transport system inner membrane component
JAPFAENF_00090 3.7e-120 ytmL P Binding-protein-dependent transport system inner membrane component
JAPFAENF_00091 2.1e-157 ET Bacterial periplasmic substrate-binding proteins
JAPFAENF_00092 5.3e-256 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
JAPFAENF_00093 6.8e-256 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JAPFAENF_00094 1e-221 G Transmembrane secretion effector
JAPFAENF_00095 4e-130 K Bacterial regulatory proteins, tetR family
JAPFAENF_00096 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
JAPFAENF_00097 2.2e-301 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
JAPFAENF_00098 2.5e-57 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
JAPFAENF_00099 3.8e-231 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
JAPFAENF_00100 1.8e-237 hom 1.1.1.3 E Homoserine dehydrogenase
JAPFAENF_00101 2.4e-188 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
JAPFAENF_00102 3e-273 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
JAPFAENF_00103 3.2e-89 K Acetyltransferase (GNAT) family
JAPFAENF_00104 7.2e-29 S Protein of unknown function (DUF1778)
JAPFAENF_00105 3.3e-131 V ATPases associated with a variety of cellular activities
JAPFAENF_00106 3.1e-222 V Efflux ABC transporter, permease protein
JAPFAENF_00107 1.2e-191 K Bacterial regulatory proteins, lacI family
JAPFAENF_00108 1.1e-250 4.2.1.68 M Enolase C-terminal domain-like
JAPFAENF_00109 2.8e-148 IQ KR domain
JAPFAENF_00110 3.8e-200 fucP G Major Facilitator Superfamily
JAPFAENF_00111 3.2e-149 S Amidohydrolase
JAPFAENF_00112 5.7e-166 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
JAPFAENF_00113 1.9e-167 mdcF S Transporter, auxin efflux carrier (AEC) family protein
JAPFAENF_00114 6.2e-232 dapE 3.5.1.18 E Peptidase dimerisation domain
JAPFAENF_00115 0.0 rne 3.1.26.12 J Ribonuclease E/G family
JAPFAENF_00116 1.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
JAPFAENF_00117 5.8e-39 rpmA J Ribosomal L27 protein
JAPFAENF_00118 4.7e-311 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
JAPFAENF_00119 5.5e-195 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JAPFAENF_00120 1.2e-214 G polysaccharide deacetylase
JAPFAENF_00121 3.8e-229 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
JAPFAENF_00123 4.7e-32 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
JAPFAENF_00124 7e-110 nusG K Participates in transcription elongation, termination and antitermination
JAPFAENF_00125 9.6e-146 K Psort location Cytoplasmic, score
JAPFAENF_00126 1e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
JAPFAENF_00127 2.7e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
JAPFAENF_00128 7.9e-163 QT PucR C-terminal helix-turn-helix domain
JAPFAENF_00129 0.0
JAPFAENF_00130 7.3e-152 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
JAPFAENF_00131 1.8e-91 bioY S BioY family
JAPFAENF_00133 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
JAPFAENF_00134 1.6e-299 pccB I Carboxyl transferase domain
JAPFAENF_00136 1.8e-44 XK27_04590 S NADPH-dependent FMN reductase
JAPFAENF_00141 3.4e-181 K Helix-turn-helix XRE-family like proteins
JAPFAENF_00142 1.8e-53 relB L RelB antitoxin
JAPFAENF_00143 2.8e-69 T Toxic component of a toxin-antitoxin (TA) module
JAPFAENF_00144 2.5e-130 K helix_turn_helix, mercury resistance
JAPFAENF_00145 5.9e-236 yxiO S Vacuole effluxer Atg22 like
JAPFAENF_00146 7.4e-194 yegV G pfkB family carbohydrate kinase
JAPFAENF_00147 2.5e-29 rpmB J Ribosomal L28 family
JAPFAENF_00148 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
JAPFAENF_00149 1.9e-101 rsmD 2.1.1.171 L Conserved hypothetical protein 95
JAPFAENF_00150 1.4e-178 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
JAPFAENF_00151 3.6e-301 yegQ O Peptidase family U32 C-terminal domain
JAPFAENF_00152 1.4e-195 yfiH Q Multi-copper polyphenol oxidoreductase laccase
JAPFAENF_00153 8.4e-151 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
JAPFAENF_00154 2.6e-126 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
JAPFAENF_00155 8.9e-44 D nuclear chromosome segregation
JAPFAENF_00156 1e-267 pepC 3.4.22.40 E Peptidase C1-like family
JAPFAENF_00157 7.7e-216 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JAPFAENF_00158 3.6e-235 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JAPFAENF_00159 6.3e-123 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JAPFAENF_00160 3.6e-85 EGP Sugar (and other) transporter
JAPFAENF_00161 3.3e-207 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
JAPFAENF_00162 1.4e-141 KT Transcriptional regulatory protein, C terminal
JAPFAENF_00163 1.3e-202 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
JAPFAENF_00164 1.2e-156 pstC P probably responsible for the translocation of the substrate across the membrane
JAPFAENF_00165 1.3e-171 pstA P Phosphate transport system permease
JAPFAENF_00166 1.2e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
JAPFAENF_00167 1.1e-251 pbuO S Permease family
JAPFAENF_00168 2e-146 3.2.1.8 S alpha beta
JAPFAENF_00169 2.4e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
JAPFAENF_00170 9.3e-49 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
JAPFAENF_00171 8.9e-192 T Forkhead associated domain
JAPFAENF_00172 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
JAPFAENF_00173 4.8e-28 L Superfamily I DNA and RNA helicases and helicase subunits
JAPFAENF_00174 1.1e-105 flgA NO SAF
JAPFAENF_00175 4.3e-31 fmdB S Putative regulatory protein
JAPFAENF_00176 7.3e-56 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
JAPFAENF_00177 2.6e-85 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
JAPFAENF_00178 3.5e-134
JAPFAENF_00179 1.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
JAPFAENF_00183 4.1e-25 rpmG J Ribosomal protein L33
JAPFAENF_00184 4.5e-214 murB 1.3.1.98 M Cell wall formation
JAPFAENF_00185 4e-268 E aromatic amino acid transport protein AroP K03293
JAPFAENF_00186 2.9e-59 fdxA C 4Fe-4S binding domain
JAPFAENF_00187 5.7e-222 dapC E Aminotransferase class I and II
JAPFAENF_00188 1.4e-234 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JAPFAENF_00189 1.9e-20 S EamA-like transporter family
JAPFAENF_00190 1e-59 S EamA-like transporter family
JAPFAENF_00192 5.2e-22
JAPFAENF_00193 1.4e-217 rbsR K helix_turn _helix lactose operon repressor
JAPFAENF_00194 1.3e-243 malE G Bacterial extracellular solute-binding protein
JAPFAENF_00195 5.5e-164 malC U Binding-protein-dependent transport system inner membrane component
JAPFAENF_00196 6.1e-160 U Binding-protein-dependent transport system inner membrane component
JAPFAENF_00197 6.3e-245 bglA 3.2.1.21 G Glycosyl hydrolase family 1
JAPFAENF_00198 3.5e-116 M Bacterial capsule synthesis protein PGA_cap
JAPFAENF_00199 1.3e-182 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JAPFAENF_00200 3.4e-112 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
JAPFAENF_00201 7.1e-116
JAPFAENF_00202 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
JAPFAENF_00203 3.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
JAPFAENF_00204 3.7e-82 rpsI J Belongs to the universal ribosomal protein uS9 family
JAPFAENF_00205 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
JAPFAENF_00206 2.3e-179 tdh 1.1.1.14 C Zinc-binding dehydrogenase
JAPFAENF_00207 2.2e-233 EGP Major facilitator Superfamily
JAPFAENF_00208 6e-75 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
JAPFAENF_00209 1.1e-214 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
JAPFAENF_00210 2.7e-196 EGP Major facilitator Superfamily
JAPFAENF_00211 1.5e-194 Z012_01000 1.1.1.14, 1.1.1.9 C Zinc-binding dehydrogenase
JAPFAENF_00212 3.1e-170 rhaR_1 K helix_turn_helix, arabinose operon control protein
JAPFAENF_00213 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
JAPFAENF_00214 2.6e-142 ywiC S YwiC-like protein
JAPFAENF_00215 1.8e-136 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
JAPFAENF_00216 8e-51 rpsJ J Involved in the binding of tRNA to the ribosomes
JAPFAENF_00217 8.7e-116 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JAPFAENF_00218 3.1e-116 rplD J Forms part of the polypeptide exit tunnel
JAPFAENF_00219 7.5e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
JAPFAENF_00220 1.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JAPFAENF_00221 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
JAPFAENF_00222 5.7e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
JAPFAENF_00223 1.7e-100 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
JAPFAENF_00224 2.2e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JAPFAENF_00225 4.1e-37 rpmC J Belongs to the universal ribosomal protein uL29 family
JAPFAENF_00226 6.4e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JAPFAENF_00227 6.6e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
JAPFAENF_00228 1.3e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
JAPFAENF_00229 4.4e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
JAPFAENF_00230 9.2e-18 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JAPFAENF_00231 5.5e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JAPFAENF_00232 5.4e-95 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
JAPFAENF_00233 2.4e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
JAPFAENF_00234 6.7e-96 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
JAPFAENF_00235 9.2e-26 rpmD J Ribosomal protein L30p/L7e
JAPFAENF_00236 8.1e-76 rplO J binds to the 23S rRNA
JAPFAENF_00237 1.7e-246 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
JAPFAENF_00238 2.2e-99 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
JAPFAENF_00239 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
JAPFAENF_00240 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
JAPFAENF_00241 9.5e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
JAPFAENF_00242 1.5e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JAPFAENF_00243 3.4e-183 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JAPFAENF_00244 3.5e-62 rplQ J Ribosomal protein L17
JAPFAENF_00245 8.7e-170 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
JAPFAENF_00246 0.0 gcs2 S A circularly permuted ATPgrasp
JAPFAENF_00247 3.2e-152 E Transglutaminase/protease-like homologues
JAPFAENF_00249 8.3e-100 K helix_turn _helix lactose operon repressor
JAPFAENF_00250 2.1e-126
JAPFAENF_00251 3.4e-186 nusA K Participates in both transcription termination and antitermination
JAPFAENF_00252 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
JAPFAENF_00253 4e-81 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JAPFAENF_00254 2.7e-219 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JAPFAENF_00255 2.8e-218 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
JAPFAENF_00256 9.7e-259 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JAPFAENF_00257 2.3e-97
JAPFAENF_00259 9.1e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
JAPFAENF_00260 1e-172 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JAPFAENF_00261 1.5e-275 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JAPFAENF_00262 1.9e-74 K Transcriptional regulator
JAPFAENF_00263 2e-197 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
JAPFAENF_00264 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
JAPFAENF_00265 0.0 crr 2.7.1.193 G pts system, glucose-specific IIABC component
JAPFAENF_00266 1.3e-162 arbG K CAT RNA binding domain
JAPFAENF_00267 4.4e-182 I Diacylglycerol kinase catalytic domain
JAPFAENF_00268 4.8e-241 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JAPFAENF_00270 3e-248 G Bacterial extracellular solute-binding protein
JAPFAENF_00271 6.9e-173 malC G Binding-protein-dependent transport system inner membrane component
JAPFAENF_00272 2.5e-167 G ABC transporter permease
JAPFAENF_00273 0.0 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
JAPFAENF_00274 2.6e-205 mdsC 2.7.1.162, 2.7.1.39 S Phosphotransferase enzyme family
JAPFAENF_00275 4.1e-168 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
JAPFAENF_00276 4.4e-118 degU K helix_turn_helix, Lux Regulon
JAPFAENF_00277 3.1e-237 tcsS3 KT PspC domain
JAPFAENF_00278 1.1e-290 pspC KT PspC domain
JAPFAENF_00279 8.9e-61
JAPFAENF_00280 0.0 S alpha beta
JAPFAENF_00281 1.6e-114 S Protein of unknown function (DUF4125)
JAPFAENF_00282 0.0 S Domain of unknown function (DUF4037)
JAPFAENF_00283 1.3e-218 araJ EGP Major facilitator Superfamily
JAPFAENF_00285 4.7e-311 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
JAPFAENF_00286 1.4e-173 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
JAPFAENF_00287 1.1e-138 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JAPFAENF_00288 5.4e-116 phoU P Plays a role in the regulation of phosphate uptake
JAPFAENF_00289 4.7e-171 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
JAPFAENF_00290 8.1e-33
JAPFAENF_00291 3.6e-213 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
JAPFAENF_00292 3.5e-169 usp 3.5.1.28 CBM50 S CHAP domain
JAPFAENF_00293 2.9e-99 M NlpC/P60 family
JAPFAENF_00294 3e-104 M NlpC/P60 family
JAPFAENF_00295 1.5e-189 T Universal stress protein family
JAPFAENF_00296 3.4e-73 attW O OsmC-like protein
JAPFAENF_00297 7.8e-168 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
JAPFAENF_00298 4.6e-128 folA 1.5.1.3 H dihydrofolate reductase
JAPFAENF_00299 1.5e-97 ptpA 3.1.3.48 T low molecular weight
JAPFAENF_00300 5.4e-110 vex2 V ABC transporter, ATP-binding protein
JAPFAENF_00301 2e-209 vex1 V Efflux ABC transporter, permease protein
JAPFAENF_00302 8.9e-219 vex3 V ABC transporter permease
JAPFAENF_00303 6.7e-08 L HTH-like domain
JAPFAENF_00304 0.0 G Glycosyl hydrolase family 20, domain 2
JAPFAENF_00306 9.7e-214 GK ROK family
JAPFAENF_00307 1.4e-248 G Bacterial extracellular solute-binding protein
JAPFAENF_00308 6.3e-22 L Helix-turn-helix domain
JAPFAENF_00309 4.8e-185 lacR K Transcriptional regulator, LacI family
JAPFAENF_00310 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
JAPFAENF_00311 3.3e-267 lacS G Psort location CytoplasmicMembrane, score 10.00
JAPFAENF_00312 9.4e-16 L Phage integrase family
JAPFAENF_00314 9.9e-161 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
JAPFAENF_00317 4e-261 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
JAPFAENF_00318 5.2e-204 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
JAPFAENF_00319 1.4e-178 3.4.14.13 M Glycosyltransferase like family 2
JAPFAENF_00320 9.6e-273 S AI-2E family transporter
JAPFAENF_00321 1.8e-234 epsG M Glycosyl transferase family 21
JAPFAENF_00322 1.8e-190 natA V ATPases associated with a variety of cellular activities
JAPFAENF_00323 6.7e-301
JAPFAENF_00324 3.6e-253 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
JAPFAENF_00325 3.7e-210 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
JAPFAENF_00326 2.7e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
JAPFAENF_00327 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JAPFAENF_00328 2.8e-117 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
JAPFAENF_00329 1.3e-162 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JAPFAENF_00330 9.4e-225 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JAPFAENF_00331 3.5e-86 S Protein of unknown function (DUF3180)
JAPFAENF_00332 3.3e-169 tesB I Thioesterase-like superfamily
JAPFAENF_00333 0.0 yjjK S ATP-binding cassette protein, ChvD family
JAPFAENF_00334 2.2e-307 EGP Major Facilitator Superfamily
JAPFAENF_00336 5.3e-178 glkA 2.7.1.2 G ROK family
JAPFAENF_00337 4.8e-88 K Winged helix DNA-binding domain
JAPFAENF_00338 1.3e-19 lmrB U Major Facilitator Superfamily
JAPFAENF_00339 6e-165 dkgB S Oxidoreductase, aldo keto reductase family protein
JAPFAENF_00340 1.5e-68 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
JAPFAENF_00341 1.8e-150
JAPFAENF_00342 4.4e-101 yebQ EGP Major facilitator Superfamily
JAPFAENF_00344 1.3e-36 rpmE J Binds the 23S rRNA
JAPFAENF_00345 4.1e-190 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JAPFAENF_00346 1.2e-163 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
JAPFAENF_00347 1.8e-207 livK E Receptor family ligand binding region
JAPFAENF_00348 5.4e-111 U Belongs to the binding-protein-dependent transport system permease family
JAPFAENF_00349 1e-188 livM U Belongs to the binding-protein-dependent transport system permease family
JAPFAENF_00350 1.6e-160 E Branched-chain amino acid ATP-binding cassette transporter
JAPFAENF_00351 6.6e-125 livF E ATPases associated with a variety of cellular activities
JAPFAENF_00352 2.5e-118 ywlC 2.7.7.87 J Belongs to the SUA5 family
JAPFAENF_00353 3e-213 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
JAPFAENF_00354 1.1e-292 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
JAPFAENF_00355 4.8e-122 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
JAPFAENF_00356 1.4e-267 recD2 3.6.4.12 L PIF1-like helicase
JAPFAENF_00357 1.2e-259 S AMMECR1
JAPFAENF_00358 9.2e-199 pflA 1.97.1.4 O Radical SAM superfamily
JAPFAENF_00359 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
JAPFAENF_00360 2.4e-116 L Single-strand binding protein family
JAPFAENF_00361 0.0 pepO 3.4.24.71 O Peptidase family M13
JAPFAENF_00362 1e-138 S Short repeat of unknown function (DUF308)
JAPFAENF_00363 3e-150 map 3.4.11.18 E Methionine aminopeptidase
JAPFAENF_00364 1.2e-249 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
JAPFAENF_00365 3.4e-146 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
JAPFAENF_00366 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
JAPFAENF_00367 1.2e-100 XK27_03610 K Acetyltransferase (GNAT) domain
JAPFAENF_00368 1.1e-85 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
JAPFAENF_00369 2.2e-201 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
JAPFAENF_00370 6e-235 aspB E Aminotransferase class-V
JAPFAENF_00371 8.4e-179 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
JAPFAENF_00372 4.5e-200 S Endonuclease/Exonuclease/phosphatase family
JAPFAENF_00374 1.4e-77 F Nucleoside 2-deoxyribosyltransferase
JAPFAENF_00375 3.2e-65 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
JAPFAENF_00376 0.0 fadD 6.2.1.3 I AMP-binding enzyme
JAPFAENF_00377 8.7e-91 ywrO 1.6.5.2 S Flavodoxin-like fold
JAPFAENF_00378 3.7e-42 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
JAPFAENF_00379 6.3e-257 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
JAPFAENF_00380 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
JAPFAENF_00381 3.2e-135 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JAPFAENF_00382 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
JAPFAENF_00383 1.1e-255 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
JAPFAENF_00384 9.8e-140 K Bacterial regulatory proteins, tetR family
JAPFAENF_00385 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
JAPFAENF_00387 3.3e-46 S Nucleotidyltransferase domain
JAPFAENF_00388 2.6e-70 S Nucleotidyltransferase substrate binding protein like
JAPFAENF_00389 5.4e-236 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
JAPFAENF_00390 4.4e-40
JAPFAENF_00391 1.3e-73 K Bacterial regulatory proteins, tetR family
JAPFAENF_00392 4.4e-164 G Major Facilitator Superfamily
JAPFAENF_00393 2.3e-248 S X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
JAPFAENF_00394 2.9e-104 I Hydrolase, alpha beta domain protein
JAPFAENF_00395 3e-86 K Bacterial regulatory proteins, tetR family
JAPFAENF_00396 0.0 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
JAPFAENF_00397 1.2e-89 K MarR family
JAPFAENF_00398 0.0 V ABC transporter, ATP-binding protein
JAPFAENF_00399 0.0 V ABC transporter transmembrane region
JAPFAENF_00400 7.9e-127 rbsR K helix_turn _helix lactose operon repressor
JAPFAENF_00401 2.4e-43 K acetyltransferase
JAPFAENF_00402 2.6e-105 rihB 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
JAPFAENF_00403 4.7e-162 dcuD C C4-dicarboxylate anaerobic carrier
JAPFAENF_00404 1.3e-152 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JAPFAENF_00405 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JAPFAENF_00406 0.0 L DEAD-like helicases superfamily
JAPFAENF_00407 3e-103 cas5d S CRISPR-associated protein (Cas_Cas5)
JAPFAENF_00408 2.5e-242 csd1 S CRISPR-associated protein (Cas_Csd1)
JAPFAENF_00409 3.4e-145 cas7c L CRISPR-associated protein Cas7
JAPFAENF_00410 1.2e-110 cas4 3.1.12.1 L Domain of unknown function DUF83
JAPFAENF_00411 9.2e-184 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JAPFAENF_00412 1.8e-36 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JAPFAENF_00414 5.3e-07 S Bacterial toxin of type II toxin-antitoxin system, YafQ
JAPFAENF_00415 1.7e-48
JAPFAENF_00418 5.2e-124 O AAA domain (Cdc48 subfamily)
JAPFAENF_00419 7e-67
JAPFAENF_00421 2.1e-53 L Phage integrase, N-terminal SAM-like domain
JAPFAENF_00422 0.0 tetP J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JAPFAENF_00423 1.7e-238 S Plasmid recombination enzyme
JAPFAENF_00424 6e-192 3.6.4.12 L COG NOG19743 non supervised orthologous group
JAPFAENF_00425 3.2e-50
JAPFAENF_00426 1.8e-206 L Phage integrase family
JAPFAENF_00427 9.6e-29
JAPFAENF_00428 1.9e-95 K sequence-specific DNA binding
JAPFAENF_00429 2.8e-301 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
JAPFAENF_00430 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
JAPFAENF_00431 1.7e-262 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JAPFAENF_00432 6.5e-66 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
JAPFAENF_00433 2.7e-134 3.1.3.85 G Phosphoglycerate mutase family
JAPFAENF_00436 5.6e-158 S Sucrose-6F-phosphate phosphohydrolase
JAPFAENF_00437 1.8e-176 metQ P NLPA lipoprotein
JAPFAENF_00438 3.2e-220 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JAPFAENF_00439 7.4e-113 metI P Binding-protein-dependent transport system inner membrane component
JAPFAENF_00440 4.1e-225 S Peptidase dimerisation domain
JAPFAENF_00441 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JAPFAENF_00442 2.6e-38
JAPFAENF_00443 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
JAPFAENF_00444 8.7e-175 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JAPFAENF_00445 8.3e-119 S Protein of unknown function (DUF3000)
JAPFAENF_00446 2.9e-251 rnd 3.1.13.5 J 3'-5' exonuclease
JAPFAENF_00447 4.4e-234 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
JAPFAENF_00448 2.4e-243 clcA_2 P Voltage gated chloride channel
JAPFAENF_00449 8.9e-60
JAPFAENF_00450 6.5e-116 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
JAPFAENF_00451 7.3e-121 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
JAPFAENF_00452 2.1e-252 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
JAPFAENF_00455 1.3e-242 patB 4.4.1.8 E Aminotransferase, class I II
JAPFAENF_00456 1.3e-238 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JAPFAENF_00457 1.6e-168 fmt2 3.2.2.10 S Belongs to the LOG family
JAPFAENF_00458 4.5e-115 safC S O-methyltransferase
JAPFAENF_00459 2.7e-182 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
JAPFAENF_00460 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
JAPFAENF_00461 0.0 dprA 5.99.1.2 LU DNA recombination-mediator protein A
JAPFAENF_00462 7.5e-291 comM O Magnesium chelatase, subunit ChlI C-terminal
JAPFAENF_00463 3.7e-75 yraN L Belongs to the UPF0102 family
JAPFAENF_00464 4.7e-23 L Transposase and inactivated derivatives IS30 family
JAPFAENF_00465 2.1e-165 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
JAPFAENF_00466 4.5e-252 metY 2.5.1.49 E Aminotransferase class-V
JAPFAENF_00467 1.4e-170 V ABC transporter, ATP-binding protein
JAPFAENF_00468 0.0 MV MacB-like periplasmic core domain
JAPFAENF_00469 4.9e-140 K helix_turn_helix, Lux Regulon
JAPFAENF_00470 0.0 tcsS2 T Histidine kinase
JAPFAENF_00471 1.6e-293 pip 3.4.11.5 S alpha/beta hydrolase fold
JAPFAENF_00472 1.4e-147 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JAPFAENF_00473 9.6e-155 cjaA ET Bacterial periplasmic substrate-binding proteins
JAPFAENF_00474 5.8e-138 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
JAPFAENF_00475 1.2e-118 E Binding-protein-dependent transport system inner membrane component
JAPFAENF_00476 6.7e-111 papP E Binding-protein-dependent transport system inner membrane component
JAPFAENF_00477 1.3e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
JAPFAENF_00478 5.3e-234 XK27_00240 K Fic/DOC family
JAPFAENF_00479 1.1e-60 yccF S Inner membrane component domain
JAPFAENF_00480 1.3e-159 ksgA 2.1.1.182 J Methyltransferase domain
JAPFAENF_00481 2.3e-65 S Cupin 2, conserved barrel domain protein
JAPFAENF_00482 1.5e-52 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
JAPFAENF_00483 1.1e-37 L RelB antitoxin
JAPFAENF_00484 2.4e-242 S HipA-like C-terminal domain
JAPFAENF_00485 5.4e-17 K addiction module antidote protein HigA
JAPFAENF_00486 3e-216 G Transmembrane secretion effector
JAPFAENF_00487 3.5e-118 K Bacterial regulatory proteins, tetR family
JAPFAENF_00488 5.9e-12
JAPFAENF_00489 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
JAPFAENF_00490 2.3e-42 feoB P transporter of a GTP-driven Fe(2 ) uptake system
JAPFAENF_00491 1.3e-39 feoB P transporter of a GTP-driven Fe(2 ) uptake system
JAPFAENF_00492 6.2e-130 S Sulfite exporter TauE/SafE
JAPFAENF_00493 8.2e-63 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
JAPFAENF_00494 1.1e-235 EGP Major facilitator Superfamily
JAPFAENF_00495 6.3e-105 3.1.3.27 E haloacid dehalogenase-like hydrolase
JAPFAENF_00496 8e-162 3.1.3.73 G Phosphoglycerate mutase family
JAPFAENF_00497 8.4e-235 rutG F Permease family
JAPFAENF_00498 0.0 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
JAPFAENF_00499 6.4e-259 nplT G Alpha amylase, catalytic domain
JAPFAENF_00500 9.8e-189 pit P Phosphate transporter family
JAPFAENF_00501 3e-113 MA20_27875 P Protein of unknown function DUF47
JAPFAENF_00502 4.1e-113 K helix_turn_helix, Lux Regulon
JAPFAENF_00503 1.3e-243 T Histidine kinase
JAPFAENF_00504 6.6e-120 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
JAPFAENF_00505 4.2e-186 V ATPases associated with a variety of cellular activities
JAPFAENF_00506 1.5e-225 V ABC-2 family transporter protein
JAPFAENF_00507 7.1e-251 V ABC-2 family transporter protein
JAPFAENF_00508 1.6e-71 E GDSL-like Lipase/Acylhydrolase family
JAPFAENF_00509 1.7e-45 E GDSL-like Lipase/Acylhydrolase family
JAPFAENF_00510 1.3e-103
JAPFAENF_00511 2.5e-196
JAPFAENF_00512 9.1e-110 3.4.13.21 E Peptidase family S51
JAPFAENF_00513 6e-106 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
JAPFAENF_00514 1.7e-160 M pfam nlp p60
JAPFAENF_00515 1.3e-153 I Serine aminopeptidase, S33
JAPFAENF_00516 1.2e-29 yozG K Cro/C1-type HTH DNA-binding domain
JAPFAENF_00517 4.1e-52 S Protein of unknown function (DUF2975)
JAPFAENF_00518 1.7e-241 pbuX F Permease family
JAPFAENF_00519 1.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
JAPFAENF_00520 0.0 pcrA 3.6.4.12 L DNA helicase
JAPFAENF_00521 9.9e-62 S Domain of unknown function (DUF4418)
JAPFAENF_00522 1.8e-215 V FtsX-like permease family
JAPFAENF_00523 1.1e-159 lolD V ABC transporter
JAPFAENF_00524 1.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
JAPFAENF_00525 2.4e-152 S Peptidase C26
JAPFAENF_00526 5.7e-70 3.5.4.5 F cytidine deaminase activity
JAPFAENF_00527 1.5e-45 sdpI S SdpI/YhfL protein family
JAPFAENF_00528 1.2e-111 E Transglutaminase-like superfamily
JAPFAENF_00529 3e-65 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
JAPFAENF_00530 4.6e-48 relB L RelB antitoxin
JAPFAENF_00531 1.9e-129 pgm3 G Phosphoglycerate mutase family
JAPFAENF_00532 2.3e-55 WQ51_05790 S Bacterial protein of unknown function (DUF948)
JAPFAENF_00533 1.6e-35
JAPFAENF_00534 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JAPFAENF_00535 5.6e-69 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JAPFAENF_00536 8.6e-194 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JAPFAENF_00537 1.8e-70 3.4.23.43 S Type IV leader peptidase family
JAPFAENF_00538 6.1e-216 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
JAPFAENF_00539 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
JAPFAENF_00540 2.7e-79 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
JAPFAENF_00541 2.6e-95 K Psort location Cytoplasmic, score
JAPFAENF_00542 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
JAPFAENF_00543 0.0 S L,D-transpeptidase catalytic domain
JAPFAENF_00544 4.3e-291 sufB O FeS assembly protein SufB
JAPFAENF_00545 1.6e-235 sufD O FeS assembly protein SufD
JAPFAENF_00546 7e-144 sufC O FeS assembly ATPase SufC
JAPFAENF_00547 1.1e-239 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JAPFAENF_00548 8.1e-102 iscU C SUF system FeS assembly protein, NifU family
JAPFAENF_00549 3.2e-109 yitW S Iron-sulfur cluster assembly protein
JAPFAENF_00550 6.2e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JAPFAENF_00551 9.6e-166 spoU 2.1.1.185 J SpoU rRNA Methylase family
JAPFAENF_00553 6.7e-134 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
JAPFAENF_00554 1.7e-57 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
JAPFAENF_00555 2.5e-217 phoH T PhoH-like protein
JAPFAENF_00556 4.7e-102 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JAPFAENF_00557 7.3e-248 corC S CBS domain
JAPFAENF_00558 4.3e-186 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JAPFAENF_00559 0.0 fadD 6.2.1.3 I AMP-binding enzyme
JAPFAENF_00560 4.8e-205 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
JAPFAENF_00561 2.1e-43 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
JAPFAENF_00562 5.1e-233 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
JAPFAENF_00563 1.4e-234 yhjX EGP Major facilitator Superfamily
JAPFAENF_00564 1.7e-103 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
JAPFAENF_00565 1.6e-226 ilvE 2.6.1.42 E Amino-transferase class IV
JAPFAENF_00566 8.8e-143 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
JAPFAENF_00567 5.3e-136 S UPF0126 domain
JAPFAENF_00568 5.8e-34 rpsT J Binds directly to 16S ribosomal RNA
JAPFAENF_00569 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
JAPFAENF_00570 2.8e-254 hemN H Involved in the biosynthesis of porphyrin-containing compound
JAPFAENF_00572 6.5e-190 K helix_turn _helix lactose operon repressor
JAPFAENF_00573 3.1e-64 K helix_turn _helix lactose operon repressor
JAPFAENF_00574 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
JAPFAENF_00575 1.4e-305 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
JAPFAENF_00576 5.4e-44
JAPFAENF_00577 0.0 E ABC transporter, substrate-binding protein, family 5
JAPFAENF_00578 0.0 S Glycosyl hydrolases related to GH101 family, GH129
JAPFAENF_00579 3e-81
JAPFAENF_00580 3.3e-244 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
JAPFAENF_00581 2.4e-158 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
JAPFAENF_00582 5.8e-160 S Sucrose-6F-phosphate phosphohydrolase
JAPFAENF_00584 4.3e-81 G transmembrane transporter activity
JAPFAENF_00586 1.9e-204 EGP Major facilitator Superfamily
JAPFAENF_00587 5.2e-30 L Transposase, Mutator family
JAPFAENF_00588 1.9e-141 cobB2 K Sir2 family
JAPFAENF_00589 1.5e-231 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
JAPFAENF_00590 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
JAPFAENF_00591 2.9e-154 G Binding-protein-dependent transport system inner membrane component
JAPFAENF_00592 1.1e-143 malC G Binding-protein-dependent transport system inner membrane component
JAPFAENF_00593 8.9e-245 msmE7 G Bacterial extracellular solute-binding protein
JAPFAENF_00594 1.2e-230 nagC GK ROK family
JAPFAENF_00595 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
JAPFAENF_00596 8.5e-81 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
JAPFAENF_00597 0.0 yjcE P Sodium/hydrogen exchanger family
JAPFAENF_00598 3.3e-120 S membrane transporter protein
JAPFAENF_00599 8.1e-145 ypfH S Phospholipase/Carboxylesterase
JAPFAENF_00600 1.2e-152
JAPFAENF_00601 9e-112 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
JAPFAENF_00602 1.2e-37
JAPFAENF_00603 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
JAPFAENF_00604 2e-16 K helix_turn _helix lactose operon repressor
JAPFAENF_00605 7.5e-86 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
JAPFAENF_00606 1.6e-288 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
JAPFAENF_00607 4.5e-206 EGP Major facilitator Superfamily
JAPFAENF_00608 1.2e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JAPFAENF_00609 5.9e-168 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
JAPFAENF_00610 4.2e-302 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
JAPFAENF_00611 1.6e-271 KLT Domain of unknown function (DUF4032)
JAPFAENF_00612 4.4e-155
JAPFAENF_00613 7.6e-18 tnp7109-21 L Integrase core domain
JAPFAENF_00614 1.1e-131 K helix_turn _helix lactose operon repressor
JAPFAENF_00615 1.1e-146 G Periplasmic binding protein domain
JAPFAENF_00616 8.7e-178 3.6.3.17 G ATPases associated with a variety of cellular activities
JAPFAENF_00617 5e-142 U Branched-chain amino acid transport system / permease component
JAPFAENF_00618 7.6e-186
JAPFAENF_00620 4.6e-32 L Integrase core domain
JAPFAENF_00621 7.1e-228 xerC_1 L Belongs to the 'phage' integrase family
JAPFAENF_00622 8.6e-192 L Phage integrase family
JAPFAENF_00623 4.7e-196 L Phage integrase, N-terminal SAM-like domain
JAPFAENF_00624 3.9e-35 L PFAM Integrase catalytic
JAPFAENF_00625 4.3e-211 ugpC E Belongs to the ABC transporter superfamily
JAPFAENF_00626 6e-137 K UTRA domain
JAPFAENF_00627 1.9e-240 ulaA 2.7.1.194 S PTS system sugar-specific permease component
JAPFAENF_00628 3.7e-45 ulaB 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
JAPFAENF_00629 8.1e-73 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JAPFAENF_00630 7.6e-219 2.4.1.166 GT2 M Glycosyltransferase like family 2
JAPFAENF_00631 1.5e-141 K LytTr DNA-binding domain
JAPFAENF_00632 1e-227 T GHKL domain
JAPFAENF_00633 1.3e-190 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JAPFAENF_00635 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JAPFAENF_00636 7.1e-89 nrdI F Probably involved in ribonucleotide reductase function
JAPFAENF_00637 7e-43 nrdH O Glutaredoxin
JAPFAENF_00638 8.3e-122 S Psort location CytoplasmicMembrane, score
JAPFAENF_00639 0.0 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
JAPFAENF_00640 3.1e-121 K Helix-turn-helix XRE-family like proteins
JAPFAENF_00641 2.5e-27 T LytTr DNA-binding domain
JAPFAENF_00642 1.5e-33 T LytTr DNA-binding domain
JAPFAENF_00643 0.0 3.2.1.21 GH3 G Fibronectin type III-like domain
JAPFAENF_00644 0.0 KLT Protein tyrosine kinase
JAPFAENF_00645 3.6e-137 O Thioredoxin
JAPFAENF_00647 2e-216 S G5
JAPFAENF_00648 4.4e-169 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
JAPFAENF_00649 1.7e-176 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
JAPFAENF_00650 4.8e-111 S LytR cell envelope-related transcriptional attenuator
JAPFAENF_00651 2.1e-282 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
JAPFAENF_00652 2.4e-165 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
JAPFAENF_00653 0.0
JAPFAENF_00654 0.0 murJ KLT MviN-like protein
JAPFAENF_00655 3.5e-175 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
JAPFAENF_00656 3.6e-222 parB K Belongs to the ParB family
JAPFAENF_00657 1.8e-173 parA D CobQ CobB MinD ParA nucleotide binding domain protein
JAPFAENF_00658 3.4e-123 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
JAPFAENF_00659 3e-93 jag S Putative single-stranded nucleic acids-binding domain
JAPFAENF_00660 9.3e-181 yidC U Membrane protein insertase, YidC Oxa1 family
JAPFAENF_00661 2.9e-57 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
JAPFAENF_00662 2.6e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
JAPFAENF_00663 3.3e-280 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JAPFAENF_00664 5.5e-206 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
JAPFAENF_00665 1.1e-201 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JAPFAENF_00666 4.2e-83 S Protein of unknown function (DUF721)
JAPFAENF_00667 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JAPFAENF_00668 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JAPFAENF_00669 7.1e-50 S Transmembrane domain of unknown function (DUF3566)
JAPFAENF_00670 7.9e-188 lacR K Transcriptional regulator, LacI family
JAPFAENF_00671 2.9e-16 lacS G Psort location CytoplasmicMembrane, score 10.00
JAPFAENF_00672 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
JAPFAENF_00673 4.2e-205 V VanZ like family
JAPFAENF_00674 9.6e-258 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
JAPFAENF_00675 2e-196 S Psort location CytoplasmicMembrane, score
JAPFAENF_00678 6.4e-122 S Protein of unknown function DUF45
JAPFAENF_00680 3.6e-257 S Domain of unknown function (DUF4143)
JAPFAENF_00681 2e-52 dps P Belongs to the Dps family
JAPFAENF_00682 7.2e-117 L Transposase and inactivated derivatives IS30 family
JAPFAENF_00683 1.1e-88 amyE G Bacterial extracellular solute-binding protein
JAPFAENF_00684 1e-114 S Protein of unknown function, DUF624
JAPFAENF_00685 3.8e-201 K Periplasmic binding protein domain
JAPFAENF_00686 2.1e-292 3.2.1.26 GH32 G Glycosyl hydrolases family 32
JAPFAENF_00687 7.4e-247 amyE G Bacterial extracellular solute-binding protein
JAPFAENF_00688 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
JAPFAENF_00689 3e-187 K Psort location Cytoplasmic, score
JAPFAENF_00690 1.3e-212 L Transposase and inactivated derivatives IS30 family
JAPFAENF_00691 1e-147 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
JAPFAENF_00692 4.1e-52 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
JAPFAENF_00693 7e-75 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
JAPFAENF_00694 5.8e-152 rafG G ABC transporter permease
JAPFAENF_00695 4.2e-150 malC G Binding-protein-dependent transport system inner membrane component
JAPFAENF_00696 1.5e-30 K Psort location Cytoplasmic, score
JAPFAENF_00697 2e-71 K Psort location Cytoplasmic, score
JAPFAENF_00698 5.9e-76 amyE G Bacterial extracellular solute-binding protein
JAPFAENF_00699 1.2e-42 amyE G Bacterial extracellular solute-binding protein
JAPFAENF_00700 2e-50 amyE G Bacterial extracellular solute-binding protein
JAPFAENF_00702 5.9e-229 M Protein of unknown function (DUF2961)
JAPFAENF_00703 2.9e-254 amyE G Bacterial extracellular solute-binding protein
JAPFAENF_00704 8.9e-187 K Periplasmic binding protein-like domain
JAPFAENF_00705 3.4e-266 amyE G Bacterial extracellular solute-binding protein
JAPFAENF_00706 5.6e-83 dps P Belongs to the Dps family
JAPFAENF_00707 2.7e-236 ytfL P Transporter associated domain
JAPFAENF_00708 2.9e-207 S AAA ATPase domain
JAPFAENF_00709 6.6e-122 cah 4.2.1.1 P Reversible hydration of carbon dioxide
JAPFAENF_00710 1e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
JAPFAENF_00711 0.0 trxB2 1.8.1.9 C Thioredoxin domain
JAPFAENF_00712 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
JAPFAENF_00713 1.7e-160
JAPFAENF_00714 0.0 S Uncharacterised protein conserved in bacteria (DUF2194)
JAPFAENF_00715 1.2e-277 pelF GT4 M Domain of unknown function (DUF3492)
JAPFAENF_00716 9.9e-283 pelG S Putative exopolysaccharide Exporter (EPS-E)
JAPFAENF_00717 0.0 cotH M CotH kinase protein
JAPFAENF_00718 4.1e-158 P VTC domain
JAPFAENF_00719 1.1e-110 S Domain of unknown function (DUF4956)
JAPFAENF_00720 0.0 yliE T Putative diguanylate phosphodiesterase
JAPFAENF_00721 1.4e-124 S AAA domain
JAPFAENF_00722 1.7e-309 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
JAPFAENF_00723 1.1e-33 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
JAPFAENF_00724 5.3e-158 L ATPase involved in DNA repair
JAPFAENF_00725 1.6e-113
JAPFAENF_00726 1.3e-36 S Sigma-70, region 4
JAPFAENF_00728 1.1e-277 M Domain of unknown function (DUF1906)
JAPFAENF_00729 1.9e-81
JAPFAENF_00730 9.5e-141 ybfG M Domain of unknown function (DUF1906)
JAPFAENF_00731 4.3e-160 L Transposase and inactivated derivatives IS30 family
JAPFAENF_00733 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
JAPFAENF_00734 0.0 yjjP S Threonine/Serine exporter, ThrE
JAPFAENF_00735 3.6e-299 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JAPFAENF_00736 1.3e-166 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
JAPFAENF_00737 1.9e-305 S Amidohydrolase family
JAPFAENF_00738 5.5e-203 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
JAPFAENF_00739 4e-34 S Protein of unknown function (DUF3073)
JAPFAENF_00740 1.1e-71 I Sterol carrier protein
JAPFAENF_00741 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
JAPFAENF_00742 2.6e-35
JAPFAENF_00743 7.9e-121 gluP 3.4.21.105 S Rhomboid family
JAPFAENF_00744 2.6e-69 crgA D Involved in cell division
JAPFAENF_00745 1.9e-106 S Bacterial protein of unknown function (DUF881)
JAPFAENF_00746 1.1e-228 srtA 3.4.22.70 M Sortase family
JAPFAENF_00747 2e-120 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
JAPFAENF_00748 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
JAPFAENF_00749 1.1e-172 T Protein tyrosine kinase
JAPFAENF_00750 4.5e-261 pbpA M penicillin-binding protein
JAPFAENF_00751 1.2e-278 rodA D Belongs to the SEDS family
JAPFAENF_00752 1.4e-271 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
JAPFAENF_00753 2.1e-75 fhaB T Inner membrane component of T3SS, cytoplasmic domain
JAPFAENF_00754 2e-129 fhaA T Protein of unknown function (DUF2662)
JAPFAENF_00755 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
JAPFAENF_00756 7.5e-213 pldB 3.1.1.5 I Serine aminopeptidase, S33
JAPFAENF_00757 3.4e-91 hsp20 O Hsp20/alpha crystallin family
JAPFAENF_00759 1.2e-177 yddG EG EamA-like transporter family
JAPFAENF_00760 4.1e-23
JAPFAENF_00761 2.1e-252 S Putative esterase
JAPFAENF_00762 0.0 lysX S Uncharacterised conserved protein (DUF2156)
JAPFAENF_00763 4.8e-201 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JAPFAENF_00764 6.3e-131 S Pyridoxamine 5'-phosphate oxidase
JAPFAENF_00765 3.6e-199 S Fic/DOC family
JAPFAENF_00766 1.5e-160 M Glycosyltransferase like family 2
JAPFAENF_00767 0.0 KL Domain of unknown function (DUF3427)
JAPFAENF_00768 2.4e-74 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
JAPFAENF_00769 1.2e-52 ybjQ S Putative heavy-metal-binding
JAPFAENF_00770 3.8e-143 yplQ S Haemolysin-III related
JAPFAENF_00772 1.7e-259 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
JAPFAENF_00773 3.3e-214 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
JAPFAENF_00775 0.0 cadA P E1-E2 ATPase
JAPFAENF_00776 1e-276 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
JAPFAENF_00777 1.5e-172 htpX O Belongs to the peptidase M48B family
JAPFAENF_00779 7.3e-172 yicL EG EamA-like transporter family
JAPFAENF_00780 3.4e-197 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
JAPFAENF_00781 2.1e-246 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
JAPFAENF_00782 4.1e-281 clcA P Voltage gated chloride channel
JAPFAENF_00783 1.7e-132 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JAPFAENF_00784 1.2e-51 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JAPFAENF_00785 2.1e-202 K helix_turn _helix lactose operon repressor
JAPFAENF_00787 6.1e-301 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
JAPFAENF_00788 5.9e-278 scrT G Transporter major facilitator family protein
JAPFAENF_00789 2.8e-180 K helix_turn _helix lactose operon repressor
JAPFAENF_00790 4.7e-252 yhjE EGP Sugar (and other) transporter
JAPFAENF_00791 2.4e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
JAPFAENF_00792 3.7e-204 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
JAPFAENF_00793 7.9e-131 S Psort location Cytoplasmic, score
JAPFAENF_00794 1.4e-190 K Transcriptional regulator
JAPFAENF_00795 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
JAPFAENF_00796 3e-187 K Psort location Cytoplasmic, score
JAPFAENF_00797 0.0 M cell wall anchor domain protein
JAPFAENF_00798 0.0 M domain protein
JAPFAENF_00799 2.3e-173 3.4.22.70 M Sortase family
JAPFAENF_00800 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
JAPFAENF_00801 0.0 malL 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
JAPFAENF_00802 1.1e-234 malE G Bacterial extracellular solute-binding protein
JAPFAENF_00803 3.3e-253 malF G Binding-protein-dependent transport system inner membrane component
JAPFAENF_00804 2.9e-165 malG G Binding-protein-dependent transport system inner membrane component
JAPFAENF_00805 0.0 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
JAPFAENF_00806 3.3e-175 S HAD-hyrolase-like
JAPFAENF_00807 1.5e-144 traX S TraX protein
JAPFAENF_00808 2.6e-194 K Psort location Cytoplasmic, score
JAPFAENF_00809 5e-102 L Resolvase, N terminal domain
JAPFAENF_00810 6.6e-187 L Helix-turn-helix domain
JAPFAENF_00811 0.0 dnaK O Heat shock 70 kDa protein
JAPFAENF_00812 5.2e-58 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
JAPFAENF_00813 9.4e-157 dnaJ1 O DnaJ molecular chaperone homology domain
JAPFAENF_00814 1.2e-103 hspR K transcriptional regulator, MerR family
JAPFAENF_00815 3.1e-17 F Psort location CytoplasmicMembrane, score 10.00
JAPFAENF_00816 5.1e-115 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
JAPFAENF_00817 5.6e-141 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
JAPFAENF_00818 2.3e-127 S HAD hydrolase, family IA, variant 3
JAPFAENF_00819 2.1e-134 dedA S SNARE associated Golgi protein
JAPFAENF_00820 2.4e-123 cpaE D bacterial-type flagellum organization
JAPFAENF_00821 1.4e-189 cpaF U Type II IV secretion system protein
JAPFAENF_00822 3.7e-73 U Type ii secretion system
JAPFAENF_00823 5.8e-115 gspF NU Type II secretion system (T2SS), protein F
JAPFAENF_00824 1.1e-41 S Protein of unknown function (DUF4244)
JAPFAENF_00825 1.4e-57 U TadE-like protein
JAPFAENF_00826 6.5e-54 S TIGRFAM helicase secretion neighborhood TadE-like protein
JAPFAENF_00827 1.1e-214 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
JAPFAENF_00828 4.6e-95 K Bacterial regulatory proteins, tetR family
JAPFAENF_00829 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
JAPFAENF_00830 8.7e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JAPFAENF_00831 1.1e-199 3.4.22.70 M Sortase family
JAPFAENF_00832 7e-68 V Abi-like protein
JAPFAENF_00833 1.3e-190 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
JAPFAENF_00834 1.3e-134 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
JAPFAENF_00835 1.8e-96 askB 1.1.1.3, 2.7.2.4 E ACT domain
JAPFAENF_00836 9e-214 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JAPFAENF_00837 9.6e-112
JAPFAENF_00838 1.1e-172 L Domain of unknown function (DUF4862)
JAPFAENF_00839 6.9e-168 2.7.1.2 GK ROK family
JAPFAENF_00840 1.3e-125 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
JAPFAENF_00841 3.7e-159 3.5.1.106 I carboxylic ester hydrolase activity
JAPFAENF_00842 5.1e-303 E Bacterial extracellular solute-binding proteins, family 5 Middle
JAPFAENF_00843 4.6e-153 oppB6 EP Binding-protein-dependent transport system inner membrane component
JAPFAENF_00844 0.0 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
JAPFAENF_00845 5.5e-147 oppF E ATPases associated with a variety of cellular activities
JAPFAENF_00846 1.7e-179 nanL 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
JAPFAENF_00847 1.4e-147 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
JAPFAENF_00848 1.6e-13 nagA 3.5.1.25 G Amidohydrolase family
JAPFAENF_00849 0.0 nanI 3.2.1.18 GH33 G BNR repeat-like domain
JAPFAENF_00850 9.8e-244 P Domain of unknown function (DUF4143)
JAPFAENF_00851 9e-153 K FCD
JAPFAENF_00852 7e-16 S Calcineurin-like phosphoesterase
JAPFAENF_00853 2.8e-274 S Calcineurin-like phosphoesterase
JAPFAENF_00854 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JAPFAENF_00855 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
JAPFAENF_00856 4e-164 3.6.1.27 I PAP2 superfamily
JAPFAENF_00857 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JAPFAENF_00858 4.8e-117 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JAPFAENF_00859 1.1e-206 holB 2.7.7.7 L DNA polymerase III
JAPFAENF_00860 2.3e-105 K helix_turn _helix lactose operon repressor
JAPFAENF_00861 3.3e-37 ptsH G PTS HPr component phosphorylation site
JAPFAENF_00863 7.8e-294 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JAPFAENF_00864 1.4e-104 S Phosphatidylethanolamine-binding protein
JAPFAENF_00865 4.4e-311 pepD E Peptidase family C69
JAPFAENF_00866 9.4e-286 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
JAPFAENF_00867 6.7e-62 S Macrophage migration inhibitory factor (MIF)
JAPFAENF_00868 8.4e-96 S GtrA-like protein
JAPFAENF_00869 3.2e-251 EGP Major facilitator Superfamily
JAPFAENF_00870 5.8e-123 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
JAPFAENF_00871 3.8e-115
JAPFAENF_00872 1.1e-228 3.1.1.31 G Lactonase, 7-bladed beta-propeller
JAPFAENF_00873 3.5e-151 S Protein of unknown function (DUF805)
JAPFAENF_00875 2.7e-293 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JAPFAENF_00878 9.5e-32 L Phage integrase, N-terminal SAM-like domain
JAPFAENF_00879 1.9e-22 L Phage integrase, N-terminal SAM-like domain
JAPFAENF_00880 0.0 efeU_1 P Iron permease FTR1 family
JAPFAENF_00881 4.7e-99 tpd P Fe2+ transport protein
JAPFAENF_00882 7.7e-233 S Predicted membrane protein (DUF2318)
JAPFAENF_00883 5e-227 macB_2 V ABC transporter permease
JAPFAENF_00884 1.6e-199 Z012_06715 V FtsX-like permease family
JAPFAENF_00885 4.5e-146 macB V ABC transporter, ATP-binding protein
JAPFAENF_00886 1.7e-67 S FMN_bind
JAPFAENF_00887 3.2e-101 K Psort location Cytoplasmic, score 8.87
JAPFAENF_00888 1.5e-305 pip S YhgE Pip domain protein
JAPFAENF_00889 0.0 pip S YhgE Pip domain protein
JAPFAENF_00890 1.5e-250 S Putative ABC-transporter type IV
JAPFAENF_00891 8.2e-271 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JAPFAENF_00892 1.3e-140 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
JAPFAENF_00893 1.4e-192 opcA G Glucose-6-phosphate dehydrogenase subunit
JAPFAENF_00894 1.5e-302 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JAPFAENF_00895 4.5e-290 3.5.2.6 V Beta-lactamase enzyme family
JAPFAENF_00897 2.3e-300 pepD E Peptidase family C69
JAPFAENF_00898 1.1e-197 XK27_01805 M Glycosyltransferase like family 2
JAPFAENF_00899 1e-151 icaR K Bacterial regulatory proteins, tetR family
JAPFAENF_00900 2.2e-171 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
JAPFAENF_00901 1e-227 amt U Ammonium Transporter Family
JAPFAENF_00902 1e-54 glnB K Nitrogen regulatory protein P-II
JAPFAENF_00903 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
JAPFAENF_00904 2e-239 dinF V MatE
JAPFAENF_00905 3.3e-257 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
JAPFAENF_00906 5.6e-106 L Phage integrase family
JAPFAENF_00907 2.3e-21 L Integrase core domain
JAPFAENF_00908 4e-25 S Appr-1'-p processing enzyme
JAPFAENF_00909 6e-85 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
JAPFAENF_00910 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
JAPFAENF_00911 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
JAPFAENF_00912 3.5e-249 srrA1 G Bacterial extracellular solute-binding protein
JAPFAENF_00913 1.2e-169 G Binding-protein-dependent transport system inner membrane component
JAPFAENF_00914 3.9e-156 lacG G Binding-protein-dependent transport system inner membrane component
JAPFAENF_00915 7e-258 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
JAPFAENF_00916 0.0 bglX-2 3.2.1.21 GH3 G Glycosyl hydrolase family 3 C-terminal domain
JAPFAENF_00917 4.6e-177 endOF2 3.2.1.14, 3.2.1.52, 3.2.1.96 GH18,GH20 G Glycosyl hydrolase, family 20, catalytic domain
JAPFAENF_00918 2.2e-14 G Glycosyl hydrolase family 85
JAPFAENF_00919 1.9e-54 tnp3512a L Transposase
JAPFAENF_00920 1.8e-280 G Glycosyl hydrolase family 85
JAPFAENF_00921 1.3e-132 G Glycosyl hydrolase family 85
JAPFAENF_00922 1.9e-72 G Glycosyl hydrolase family 85
JAPFAENF_00923 3.3e-203 K helix_turn _helix lactose operon repressor
JAPFAENF_00924 2.9e-237 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
JAPFAENF_00925 2.5e-255 S Metal-independent alpha-mannosidase (GH125)
JAPFAENF_00926 7.2e-31
JAPFAENF_00927 4e-130 C Putative TM nitroreductase
JAPFAENF_00928 8.9e-170 EG EamA-like transporter family
JAPFAENF_00929 4.1e-71 pdxH S Pfam:Pyridox_oxidase
JAPFAENF_00930 7.7e-233 L ribosomal rna small subunit methyltransferase
JAPFAENF_00931 5.4e-166 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
JAPFAENF_00932 5.3e-170 corA P CorA-like Mg2+ transporter protein
JAPFAENF_00933 2.7e-160 ET Bacterial periplasmic substrate-binding proteins
JAPFAENF_00934 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
JAPFAENF_00935 1.6e-44 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
JAPFAENF_00936 7.1e-311 comE S Competence protein
JAPFAENF_00937 3.4e-172 holA 2.7.7.7 L DNA polymerase III delta subunit
JAPFAENF_00938 4e-88 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
JAPFAENF_00939 1e-159 yeaZ 2.3.1.234 O Glycoprotease family
JAPFAENF_00940 1e-105 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
JAPFAENF_00941 6.2e-196 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JAPFAENF_00943 2.7e-17
JAPFAENF_00949 2.9e-15 S Helix-turn-helix domain
JAPFAENF_00950 4.4e-16 S Transcription factor WhiB
JAPFAENF_00953 8e-31 parA D VirC1 protein
JAPFAENF_00955 3.4e-22
JAPFAENF_00956 2.5e-49
JAPFAENF_00957 2e-37
JAPFAENF_00959 8.9e-184 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
JAPFAENF_00960 1.3e-102 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
JAPFAENF_00961 6.6e-70 divIC D Septum formation initiator
JAPFAENF_00962 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
JAPFAENF_00963 5.4e-180 1.1.1.65 C Aldo/keto reductase family
JAPFAENF_00964 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JAPFAENF_00965 1.5e-114 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
JAPFAENF_00966 4.1e-93 2.3.1.183 M Acetyltransferase (GNAT) domain
JAPFAENF_00967 0.0 S Uncharacterised protein family (UPF0182)
JAPFAENF_00968 6.6e-139 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
JAPFAENF_00969 3.2e-138 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JAPFAENF_00970 7.9e-97
JAPFAENF_00971 2e-236 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
JAPFAENF_00972 1.4e-281 thrC 4.2.3.1 E Threonine synthase N terminus
JAPFAENF_00973 1.2e-105
JAPFAENF_00974 1.7e-120 S ABC-2 family transporter protein
JAPFAENF_00975 1.1e-172 V ATPases associated with a variety of cellular activities
JAPFAENF_00976 4.8e-58 K helix_turn_helix gluconate operon transcriptional repressor
JAPFAENF_00977 2.1e-56 J Acetyltransferase (GNAT) domain
JAPFAENF_00978 7.7e-120 S Haloacid dehalogenase-like hydrolase
JAPFAENF_00979 0.0 recN L May be involved in recombinational repair of damaged DNA
JAPFAENF_00980 1.9e-183 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JAPFAENF_00981 1.9e-11 trkB P Cation transport protein
JAPFAENF_00982 4.8e-45 trkA P TrkA-N domain
JAPFAENF_00983 2.3e-87
JAPFAENF_00984 4.7e-140 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
JAPFAENF_00986 4.6e-199 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
JAPFAENF_00987 2.7e-151 L Tetratricopeptide repeat
JAPFAENF_00988 2.6e-255 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JAPFAENF_00989 1.4e-300 S Protein of unknown function (DUF975)
JAPFAENF_00990 2.5e-138 S Putative ABC-transporter type IV
JAPFAENF_00991 4.6e-102 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
JAPFAENF_00992 1.5e-64 M1-798 P Rhodanese Homology Domain
JAPFAENF_00993 2e-146 moeB 2.7.7.80 H ThiF family
JAPFAENF_00994 3.6e-157 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
JAPFAENF_00995 1.2e-28 thiS 2.8.1.10 H ThiS family
JAPFAENF_00996 4.4e-280 argH 4.3.2.1 E argininosuccinate lyase
JAPFAENF_00997 2.4e-32 relB L RelB antitoxin
JAPFAENF_00998 8.5e-44 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
JAPFAENF_00999 2.5e-30 L PFAM Integrase catalytic
JAPFAENF_01000 1.9e-49 L PFAM Integrase catalytic
JAPFAENF_01001 1.5e-22 P ATPases associated with a variety of cellular activities
JAPFAENF_01002 4.6e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
JAPFAENF_01003 5.9e-83 argR K Regulates arginine biosynthesis genes
JAPFAENF_01004 3.9e-184 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
JAPFAENF_01005 2.4e-250 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
JAPFAENF_01006 8.2e-179 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
JAPFAENF_01007 9.1e-212 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
JAPFAENF_01008 8e-202 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
JAPFAENF_01009 1.5e-86
JAPFAENF_01010 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
JAPFAENF_01011 7.7e-202 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JAPFAENF_01012 1.3e-159 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JAPFAENF_01013 1.2e-158 cbiQ P Cobalt transport protein
JAPFAENF_01014 1.3e-279 ykoD P ATPases associated with a variety of cellular activities
JAPFAENF_01015 6.2e-108 ykoE S ABC-type cobalt transport system, permease component
JAPFAENF_01016 3e-259 argE E Peptidase dimerisation domain
JAPFAENF_01017 6.9e-102 S Protein of unknown function (DUF3043)
JAPFAENF_01018 4.2e-278 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JAPFAENF_01019 2.1e-143 S Domain of unknown function (DUF4191)
JAPFAENF_01020 2.3e-281 glnA 6.3.1.2 E glutamine synthetase
JAPFAENF_01021 1e-204 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
JAPFAENF_01022 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JAPFAENF_01023 0.0 S Tetratricopeptide repeat
JAPFAENF_01024 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
JAPFAENF_01025 1.2e-138 bioM P ATPases associated with a variety of cellular activities
JAPFAENF_01026 4.8e-224 E Aminotransferase class I and II
JAPFAENF_01027 5.2e-190 P NMT1/THI5 like
JAPFAENF_01028 4.5e-135 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
JAPFAENF_01029 3.1e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JAPFAENF_01030 4.5e-129 recO L Involved in DNA repair and RecF pathway recombination
JAPFAENF_01031 0.0 I acetylesterase activity
JAPFAENF_01032 5.3e-231 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
JAPFAENF_01033 1.7e-221 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
JAPFAENF_01034 8.8e-210 2.7.11.1 NU Tfp pilus assembly protein FimV
JAPFAENF_01036 1.6e-73 S Protein of unknown function (DUF3052)
JAPFAENF_01037 3.5e-158 lon T Belongs to the peptidase S16 family
JAPFAENF_01038 1.8e-296 S Zincin-like metallopeptidase
JAPFAENF_01039 4e-292 uvrD2 3.6.4.12 L DNA helicase
JAPFAENF_01040 7.7e-302 mphA S Aminoglycoside phosphotransferase
JAPFAENF_01041 7.2e-33 S Protein of unknown function (DUF3107)
JAPFAENF_01042 6.5e-170 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
JAPFAENF_01043 3.2e-127 S Vitamin K epoxide reductase
JAPFAENF_01044 2.7e-171 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
JAPFAENF_01045 5.7e-149 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
JAPFAENF_01046 2.9e-159 S Patatin-like phospholipase
JAPFAENF_01047 4.2e-15 S Domain of unknown function (DUF4143)
JAPFAENF_01048 1.5e-25 S Domain of unknown function (DUF4143)
JAPFAENF_01049 7.2e-116 XK27_08050 O prohibitin homologues
JAPFAENF_01050 2.7e-08 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
JAPFAENF_01051 4.6e-176 S Domain of unknown function (DUF4143)
JAPFAENF_01052 2.5e-42 XAC3035 O Glutaredoxin
JAPFAENF_01053 4e-234 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
JAPFAENF_01054 1.9e-126 ypfH S Phospholipase/Carboxylesterase
JAPFAENF_01055 0.0 tetP J Elongation factor G, domain IV
JAPFAENF_01057 8.3e-136 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
JAPFAENF_01058 1.4e-104 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
JAPFAENF_01059 6.7e-170 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
JAPFAENF_01060 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
JAPFAENF_01061 1.1e-239 carA 6.3.5.5 F Belongs to the CarA family
JAPFAENF_01062 1.7e-93 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JAPFAENF_01063 3.9e-104 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JAPFAENF_01064 8.1e-131 ybbL V ATPases associated with a variety of cellular activities
JAPFAENF_01065 7.1e-136 ybbM V Uncharacterised protein family (UPF0014)
JAPFAENF_01066 0.0 T Diguanylate cyclase, GGDEF domain
JAPFAENF_01067 1.5e-67 L PFAM Integrase catalytic
JAPFAENF_01068 1.3e-133 L PFAM Integrase catalytic
JAPFAENF_01069 1.1e-105 T Diguanylate cyclase, GGDEF domain
JAPFAENF_01070 9.1e-253 3.2.1.14 GH18 S Carbohydrate binding domain
JAPFAENF_01071 0.0 M probably involved in cell wall
JAPFAENF_01073 7.4e-48 4.1.1.44 L Cupin 2, conserved barrel domain protein
JAPFAENF_01074 1e-185 S Membrane transport protein
JAPFAENF_01075 6.4e-41 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
JAPFAENF_01076 5.7e-110 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
JAPFAENF_01078 3.2e-124 magIII L endonuclease III
JAPFAENF_01079 4.4e-242 vbsD V MatE
JAPFAENF_01080 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
JAPFAENF_01081 3.8e-138 K LysR substrate binding domain
JAPFAENF_01082 2.1e-218 EGP Major Facilitator Superfamily
JAPFAENF_01083 8e-155 K LysR substrate binding domain
JAPFAENF_01084 6.9e-218 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
JAPFAENF_01086 2.1e-143 K helix_turn _helix lactose operon repressor
JAPFAENF_01087 0.0 3.2.1.25 G beta-mannosidase
JAPFAENF_01088 7.1e-139 dppF E ABC transporter
JAPFAENF_01089 5e-141 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
JAPFAENF_01090 2e-154 EP Binding-protein-dependent transport system inner membrane component
JAPFAENF_01091 2.6e-175 EP Binding-protein-dependent transport system inner membrane component
JAPFAENF_01092 2.1e-302 E Bacterial extracellular solute-binding proteins, family 5 Middle
JAPFAENF_01093 1.9e-237 bglA 3.2.1.21 G Glycosyl hydrolase family 1
JAPFAENF_01094 4.2e-147 E GDSL-like Lipase/Acylhydrolase family
JAPFAENF_01095 2.3e-172 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
JAPFAENF_01096 2.7e-77 KT Transcriptional regulatory protein, C terminal
JAPFAENF_01097 7.9e-35
JAPFAENF_01098 1.1e-253 S Domain of unknown function (DUF4143)
JAPFAENF_01099 3.6e-196 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
JAPFAENF_01100 3e-16 K MerR family regulatory protein
JAPFAENF_01101 5.4e-09 K MerR family regulatory protein
JAPFAENF_01102 9.3e-87 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JAPFAENF_01103 1.3e-60 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JAPFAENF_01104 5e-31 S Psort location CytoplasmicMembrane, score
JAPFAENF_01105 2.7e-186 MA20_14895 S Conserved hypothetical protein 698
JAPFAENF_01106 7.1e-147 rlrG K Bacterial regulatory helix-turn-helix protein, lysR family
JAPFAENF_01107 1e-128 tmp1 S Domain of unknown function (DUF4391)
JAPFAENF_01108 6.2e-232 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JAPFAENF_01109 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JAPFAENF_01110 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
JAPFAENF_01111 9.3e-62 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
JAPFAENF_01112 6.6e-111 yocS S SBF-like CPA transporter family (DUF4137)
JAPFAENF_01114 1.5e-194 ltaE 4.1.2.48 E Beta-eliminating lyase
JAPFAENF_01115 8.1e-221 M Glycosyl transferase 4-like domain
JAPFAENF_01116 3.9e-229 mtnE 2.6.1.83 E Aminotransferase class I and II
JAPFAENF_01117 3.6e-225 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
JAPFAENF_01118 1.2e-137 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
JAPFAENF_01119 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
JAPFAENF_01120 9.1e-221 I alpha/beta hydrolase fold
JAPFAENF_01121 2.8e-252 Q D-alanine [D-alanyl carrier protein] ligase activity
JAPFAENF_01122 1.5e-110 Q D-alanine [D-alanyl carrier protein] ligase activity
JAPFAENF_01123 1.9e-144
JAPFAENF_01124 1.5e-29 S Protein of unknown function (DUF4230)
JAPFAENF_01127 2.4e-08 S Protein of unknown function (DUF4230)
JAPFAENF_01128 1.2e-101 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
JAPFAENF_01129 3e-238 C Na H antiporter family protein
JAPFAENF_01130 8.7e-45 C Aldo/keto reductase family
JAPFAENF_01131 3.5e-32
JAPFAENF_01132 9.5e-289 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
JAPFAENF_01134 6e-293 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JAPFAENF_01135 9.2e-184 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
JAPFAENF_01136 1.4e-242 purD 6.3.4.13 F Belongs to the GARS family
JAPFAENF_01137 1.5e-299 aldH 1.2.1.3, 1.2.1.5 C Aldehyde dehydrogenase family
JAPFAENF_01138 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
JAPFAENF_01139 1e-154 P Zinc-uptake complex component A periplasmic
JAPFAENF_01141 6.1e-181 ycgR S Predicted permease
JAPFAENF_01142 7.3e-138 S TIGRFAM TIGR03943 family protein
JAPFAENF_01143 8.7e-27 zur P Ferric uptake regulator family
JAPFAENF_01144 7.1e-64
JAPFAENF_01145 1.1e-70 XK27_06785 V ABC transporter
JAPFAENF_01146 5.8e-28 ylbB V FtsX-like permease family
JAPFAENF_01147 6.7e-85 ylbB V FtsX-like permease family
JAPFAENF_01148 1.2e-68 zur P Belongs to the Fur family
JAPFAENF_01149 1.1e-222 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JAPFAENF_01150 6.2e-85 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JAPFAENF_01151 2.4e-181 adh3 C Zinc-binding dehydrogenase
JAPFAENF_01152 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JAPFAENF_01153 5.6e-278 macB_8 V MacB-like periplasmic core domain
JAPFAENF_01154 8e-177 M Conserved repeat domain
JAPFAENF_01155 5.3e-134 V ATPases associated with a variety of cellular activities
JAPFAENF_01156 2.1e-85 msrA 1.8.4.11, 1.8.4.12 O peptide-methionine (S)-S-oxide reductase activity
JAPFAENF_01157 0.0 E ABC transporter, substrate-binding protein, family 5
JAPFAENF_01158 4.5e-13 L Psort location Cytoplasmic, score 8.87
JAPFAENF_01159 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
JAPFAENF_01160 8.4e-224 K helix_turn _helix lactose operon repressor
JAPFAENF_01161 3.6e-257 G Bacterial extracellular solute-binding protein
JAPFAENF_01164 2.5e-158 K Helix-turn-helix domain, rpiR family
JAPFAENF_01165 7e-43 G Alpha-L-arabinofuranosidase C-terminal domain
JAPFAENF_01166 3.3e-30
JAPFAENF_01167 4.2e-209 ybiR P Citrate transporter
JAPFAENF_01168 2.6e-296 EK Alanine-glyoxylate amino-transferase
JAPFAENF_01169 2.1e-114 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
JAPFAENF_01170 3.1e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
JAPFAENF_01171 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
JAPFAENF_01172 2.4e-242 dgt 3.1.5.1 F Phosphohydrolase-associated domain
JAPFAENF_01173 1.5e-263 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JAPFAENF_01174 4.1e-270 yhdG E aromatic amino acid transport protein AroP K03293
JAPFAENF_01175 1.7e-104 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JAPFAENF_01176 2.7e-93 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
JAPFAENF_01177 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
JAPFAENF_01178 1.6e-219 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
JAPFAENF_01179 4.8e-193 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
JAPFAENF_01180 2.9e-137 sapF E ATPases associated with a variety of cellular activities
JAPFAENF_01181 1.2e-135 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
JAPFAENF_01182 5.9e-148 EP Binding-protein-dependent transport system inner membrane component
JAPFAENF_01183 4.3e-167 P Binding-protein-dependent transport system inner membrane component
JAPFAENF_01184 6.5e-293 E ABC transporter, substrate-binding protein, family 5
JAPFAENF_01185 5.9e-143 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
JAPFAENF_01186 1e-278 G Bacterial extracellular solute-binding protein
JAPFAENF_01187 1.7e-259 G Bacterial extracellular solute-binding protein
JAPFAENF_01188 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
JAPFAENF_01189 4.4e-167 G ABC transporter permease
JAPFAENF_01190 1.3e-168 malC G Binding-protein-dependent transport system inner membrane component
JAPFAENF_01191 2.4e-181 K Periplasmic binding protein domain
JAPFAENF_01192 5.8e-140 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
JAPFAENF_01193 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
JAPFAENF_01194 1.4e-150 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
JAPFAENF_01195 1.6e-153 yecS E Binding-protein-dependent transport system inner membrane component
JAPFAENF_01196 3.4e-169 pknD ET ABC transporter, substrate-binding protein, family 3
JAPFAENF_01197 6.1e-142 pknD ET ABC transporter, substrate-binding protein, family 3
JAPFAENF_01198 6.3e-79 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
JAPFAENF_01199 4e-147 usp 3.5.1.28 CBM50 D CHAP domain protein
JAPFAENF_01200 9.8e-161 ftsX D Part of the ABC transporter FtsEX involved in cellular division
JAPFAENF_01201 1.3e-202 ftsE D Cell division ATP-binding protein FtsE
JAPFAENF_01202 1.6e-205 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
JAPFAENF_01203 3.8e-268 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
JAPFAENF_01204 7.5e-123 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
JAPFAENF_01205 1.2e-258 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JAPFAENF_01206 1.2e-56 S Sulfite exporter TauE/SafE
JAPFAENF_01207 4e-47 K PFAM helix-turn-helix- domain containing protein, AraC type
JAPFAENF_01208 7.1e-132 bglA 3.2.1.21 G Glycosyl hydrolase family 1
JAPFAENF_01209 2.4e-117 P Binding-protein-dependent transport system inner membrane component
JAPFAENF_01210 4.1e-108 malC P Binding-protein-dependent transport system inner membrane component
JAPFAENF_01211 1.2e-106 G Bacterial extracellular solute-binding protein
JAPFAENF_01212 3.5e-11 S Sulfite exporter TauE/SafE
JAPFAENF_01213 5.6e-52 S Sulfite exporter TauE/SafE
JAPFAENF_01214 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
JAPFAENF_01215 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JAPFAENF_01216 1.7e-162 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JAPFAENF_01217 2.4e-133 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
JAPFAENF_01218 3.8e-235 G Major Facilitator Superfamily
JAPFAENF_01219 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
JAPFAENF_01220 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
JAPFAENF_01221 3e-220 KLT Protein tyrosine kinase
JAPFAENF_01222 0.0 S Fibronectin type 3 domain
JAPFAENF_01223 2.5e-239 S Protein of unknown function DUF58
JAPFAENF_01224 0.0 E Transglutaminase-like superfamily
JAPFAENF_01225 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JAPFAENF_01226 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JAPFAENF_01227 1.1e-127
JAPFAENF_01228 1e-184 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
JAPFAENF_01229 7.6e-115 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
JAPFAENF_01230 3.2e-253 S UPF0210 protein
JAPFAENF_01231 6.4e-44 gcvR T Belongs to the UPF0237 family
JAPFAENF_01232 0.0 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
JAPFAENF_01233 6.9e-198 K helix_turn _helix lactose operon repressor
JAPFAENF_01234 1.2e-115 S Protein of unknown function, DUF624
JAPFAENF_01235 4.7e-171 G Binding-protein-dependent transport system inner membrane component
JAPFAENF_01236 1.1e-178 G Binding-protein-dependent transport system inner membrane component
JAPFAENF_01237 0.0 G Bacterial extracellular solute-binding protein
JAPFAENF_01238 2.6e-233 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
JAPFAENF_01239 8.6e-253 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
JAPFAENF_01240 2.8e-123 glpR K DeoR C terminal sensor domain
JAPFAENF_01241 1.8e-228 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
JAPFAENF_01242 8.2e-230 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
JAPFAENF_01243 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
JAPFAENF_01244 1.5e-132 glxR K helix_turn_helix, cAMP Regulatory protein
JAPFAENF_01245 3.4e-211 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
JAPFAENF_01246 5.4e-192 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
JAPFAENF_01247 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
JAPFAENF_01248 1.6e-224 S Uncharacterized conserved protein (DUF2183)
JAPFAENF_01249 5.9e-70 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
JAPFAENF_01250 1.1e-212 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
JAPFAENF_01251 1.7e-159 mhpC I Alpha/beta hydrolase family
JAPFAENF_01252 3.2e-121 F Domain of unknown function (DUF4916)
JAPFAENF_01253 1.9e-59 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
JAPFAENF_01254 1.9e-170 S G5
JAPFAENF_01255 1.3e-148
JAPFAENF_01256 1.9e-235 wcoI DM Psort location CytoplasmicMembrane, score
JAPFAENF_01257 3.2e-69
JAPFAENF_01258 5.6e-261 S Psort location CytoplasmicMembrane, score 9.99
JAPFAENF_01259 1e-10 L Helix-turn-helix domain
JAPFAENF_01260 6.7e-21 S enterobacterial common antigen metabolic process
JAPFAENF_01261 4.3e-186 S AAA domain, putative AbiEii toxin, Type IV TA system
JAPFAENF_01262 1.6e-80 S RloB-like protein
JAPFAENF_01264 1.4e-26 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
JAPFAENF_01266 2.5e-09
JAPFAENF_01267 1.5e-80 J Nucleotidyltransferase domain
JAPFAENF_01268 9.8e-68
JAPFAENF_01269 6.9e-139 tnp7109-21 L Integrase core domain
JAPFAENF_01270 7.6e-44 L Transposase
JAPFAENF_01271 6.8e-67
JAPFAENF_01272 1e-86
JAPFAENF_01273 1.7e-07
JAPFAENF_01274 8.7e-238 L Phage integrase family
JAPFAENF_01276 1.6e-232 3.1.21.5 L Type III restriction enzyme res subunit
JAPFAENF_01277 7.2e-26 modB 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
JAPFAENF_01278 1.8e-136 mod 2.1.1.72 L DNA methylase
JAPFAENF_01279 1.3e-85 2.1.1.72, 3.2.1.172 GH105 V Type I restriction enzyme R protein N terminus (HSDR_N)
JAPFAENF_01280 1.7e-273 aspA 4.3.1.1 E Fumarase C C-terminus
JAPFAENF_01281 1.6e-07 L Transposase DDE domain
JAPFAENF_01282 3.9e-234 S AAA domain
JAPFAENF_01283 8.4e-44 L Transposase, Mutator family
JAPFAENF_01284 1.9e-105 K Bacterial regulatory proteins, tetR family
JAPFAENF_01285 3.4e-255 MA20_36090 S Psort location Cytoplasmic, score 8.87
JAPFAENF_01286 1.8e-92 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JAPFAENF_01287 2.3e-81 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
JAPFAENF_01288 9.2e-76 ams 2.4.1.4, 3.2.1.1, 5.4.99.16 GH13 G Alpha amylase, catalytic domain
JAPFAENF_01289 3.4e-113 P Sodium/hydrogen exchanger family
JAPFAENF_01291 2.8e-81
JAPFAENF_01292 0.0 Q von Willebrand factor (vWF) type A domain
JAPFAENF_01293 2.8e-277 M LPXTG cell wall anchor motif
JAPFAENF_01295 1.1e-50
JAPFAENF_01296 7.6e-110
JAPFAENF_01297 1e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
JAPFAENF_01298 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
JAPFAENF_01299 3.2e-40 V ABC transporter, ATP-binding protein
JAPFAENF_01300 1.3e-65 V ABC transporter, ATP-binding protein
JAPFAENF_01301 2.1e-30 macB_7 V FtsX-like permease family
JAPFAENF_01302 1.8e-88 lemA S LemA family
JAPFAENF_01303 0.0 S Predicted membrane protein (DUF2207)
JAPFAENF_01304 1.9e-10 S Predicted membrane protein (DUF2207)
JAPFAENF_01305 1.5e-224 S Predicted membrane protein (DUF2207)
JAPFAENF_01306 1.2e-19
JAPFAENF_01307 3.8e-167 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
JAPFAENF_01308 1.1e-200 iunH1 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
JAPFAENF_01309 6.4e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JAPFAENF_01310 1e-34 CP_0960 S Belongs to the UPF0109 family
JAPFAENF_01311 5.3e-62 rpsP J Belongs to the bacterial ribosomal protein bS16 family
JAPFAENF_01312 4.2e-213 S Endonuclease/Exonuclease/phosphatase family
JAPFAENF_01313 6e-270 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JAPFAENF_01314 4.3e-161 P Cation efflux family
JAPFAENF_01315 0.0 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
JAPFAENF_01316 3.9e-136 guaA1 6.3.5.2 F Peptidase C26
JAPFAENF_01317 0.0 yjjK S ABC transporter
JAPFAENF_01318 2.1e-73 vapC S Toxic component of a toxin-antitoxin (TA) module. An RNase
JAPFAENF_01319 3.9e-44 stbC S Plasmid stability protein
JAPFAENF_01320 4e-93 ilvN 2.2.1.6 E ACT domain
JAPFAENF_01321 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
JAPFAENF_01322 9.7e-135 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
JAPFAENF_01323 9.3e-21 rpmF J Belongs to the bacterial ribosomal protein bL32 family
JAPFAENF_01324 6.1e-114 yceD S Uncharacterized ACR, COG1399
JAPFAENF_01325 2.1e-79
JAPFAENF_01326 6e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JAPFAENF_01327 2.7e-48 S Protein of unknown function (DUF3039)
JAPFAENF_01328 1.3e-195 yghZ C Aldo/keto reductase family
JAPFAENF_01329 6.3e-78 soxR K MerR, DNA binding
JAPFAENF_01330 1e-116
JAPFAENF_01331 7.2e-250 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JAPFAENF_01332 7e-144 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
JAPFAENF_01333 1.3e-134 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
JAPFAENF_01334 4.4e-175 S Auxin Efflux Carrier
JAPFAENF_01337 0.0 pgi 5.3.1.9 G Belongs to the GPI family
JAPFAENF_01338 5.5e-264 abcT3 P ATPases associated with a variety of cellular activities
JAPFAENF_01339 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
JAPFAENF_01340 1.8e-59 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
JAPFAENF_01341 4.7e-163 lepB 3.4.21.89 U Belongs to the peptidase S26 family
JAPFAENF_01342 6.5e-159 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JAPFAENF_01343 5.6e-211 K helix_turn _helix lactose operon repressor
JAPFAENF_01344 0.0 fadD 6.2.1.3 I AMP-binding enzyme
JAPFAENF_01345 4.2e-40 araE EGP Major facilitator Superfamily
JAPFAENF_01346 8.3e-20 araE EGP Major facilitator Superfamily
JAPFAENF_01347 0.0 cydD V ABC transporter transmembrane region
JAPFAENF_01348 9.8e-37 EGP Major facilitator Superfamily
JAPFAENF_01349 7.1e-261 G Bacterial extracellular solute-binding protein
JAPFAENF_01350 9.9e-66 malC G Binding-protein-dependent transport system inner membrane component
JAPFAENF_01351 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
JAPFAENF_01352 4.4e-189 K helix_turn _helix lactose operon repressor
JAPFAENF_01353 0.0 ganB 3.2.1.89 G Glycosyl hydrolase family 53
JAPFAENF_01354 9.5e-166 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
JAPFAENF_01355 1.5e-138 L Protein of unknown function (DUF1524)
JAPFAENF_01356 2e-231 mntH P H( )-stimulated, divalent metal cation uptake system
JAPFAENF_01357 1.1e-281 EGP Major facilitator Superfamily
JAPFAENF_01358 0.0 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
JAPFAENF_01359 2.9e-235 rfbP 2.7.8.6 M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
JAPFAENF_01360 9.7e-109 3.1.3.48 T Low molecular weight phosphatase family
JAPFAENF_01361 4.6e-114 S Psort location CytoplasmicMembrane, score 9.99
JAPFAENF_01363 4.5e-09 L Transposase and inactivated derivatives IS30 family
JAPFAENF_01364 5.9e-44 L Transposase and inactivated derivatives IS30 family
JAPFAENF_01365 4.7e-08 L Transposase, Mutator family
JAPFAENF_01366 4.8e-105 bcp 1.11.1.15 O Redoxin
JAPFAENF_01367 2.6e-141
JAPFAENF_01369 1.5e-120 2.5.1.19 S Belongs to the short-chain dehydrogenases reductases (SDR) family
JAPFAENF_01370 4.8e-226 K SIR2-like domain
JAPFAENF_01372 3.3e-105 S Putative inner membrane protein (DUF1819)
JAPFAENF_01373 4.6e-126 S Domain of unknown function (DUF1788)
JAPFAENF_01374 0.0 FbpA 3.1.21.3, 3.2.1.170 GH38 K RNA-binding protein homologous to eukaryotic snRNP
JAPFAENF_01375 0.0 LV DNA restriction-modification system
JAPFAENF_01376 3.3e-237 S SIR2-like domain
JAPFAENF_01377 8e-251 S Domain of unknown function DUF87
JAPFAENF_01378 0.0 LV DNA restriction-modification system
JAPFAENF_01379 0.0 K SIR2-like domain
JAPFAENF_01380 4.6e-256 lexA 3.6.4.12 K Putative DNA-binding domain
JAPFAENF_01381 0.0 thiN 2.7.6.2 H PglZ domain
JAPFAENF_01382 0.0 3.4.21.53 O Putative ATP-dependent Lon protease
JAPFAENF_01383 4.7e-35 rarD S EamA-like transporter family
JAPFAENF_01384 1e-124 S Plasmid pRiA4b ORF-3-like protein
JAPFAENF_01385 7.1e-97 CP_1020 S zinc ion binding
JAPFAENF_01386 1.6e-29 CP_1020 S zinc ion binding
JAPFAENF_01387 1.3e-19 CP_1020 S zinc ion binding
JAPFAENF_01388 3.5e-82 I alpha/beta hydrolase fold
JAPFAENF_01389 1.8e-73 I alpha/beta hydrolase fold
JAPFAENF_01390 4.2e-89 S Appr-1'-p processing enzyme
JAPFAENF_01391 7.2e-146 S phosphoesterase or phosphohydrolase
JAPFAENF_01392 2e-140 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
JAPFAENF_01394 3e-133 S Phospholipase/Carboxylesterase
JAPFAENF_01395 1.6e-202 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
JAPFAENF_01396 3.8e-99 sixA 3.6.1.55 T Phosphoglycerate mutase family
JAPFAENF_01398 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JAPFAENF_01399 8.2e-162 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
JAPFAENF_01400 4.8e-187 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
JAPFAENF_01401 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
JAPFAENF_01402 9.2e-178 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
JAPFAENF_01403 7e-74 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
JAPFAENF_01404 6.3e-290 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
JAPFAENF_01405 9.4e-175 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
JAPFAENF_01406 6.9e-158 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
JAPFAENF_01407 4e-181 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
JAPFAENF_01408 5e-125 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JAPFAENF_01409 9e-29
JAPFAENF_01410 8.1e-218 MA20_36090 S Psort location Cytoplasmic, score 8.87
JAPFAENF_01411 9.4e-172 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
JAPFAENF_01412 9.4e-123 3.8.1.2 S Haloacid dehalogenase-like hydrolase
JAPFAENF_01413 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JAPFAENF_01414 6.4e-301 ybiT S ABC transporter
JAPFAENF_01415 5.8e-129 S Enoyl-(Acyl carrier protein) reductase
JAPFAENF_01416 2.4e-44 XK26_04485 P Cobalt transport protein
JAPFAENF_01417 1.5e-233 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
JAPFAENF_01418 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
JAPFAENF_01419 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
JAPFAENF_01420 3.7e-190 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
JAPFAENF_01421 1.1e-178 rapZ S Displays ATPase and GTPase activities
JAPFAENF_01422 3.5e-169 whiA K May be required for sporulation
JAPFAENF_01423 1.9e-220 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
JAPFAENF_01424 6e-146 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
JAPFAENF_01425 5.5e-34 secG U Preprotein translocase SecG subunit
JAPFAENF_01426 1.9e-175 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
JAPFAENF_01427 1.1e-158 S Sucrose-6F-phosphate phosphohydrolase
JAPFAENF_01428 1.2e-299 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
JAPFAENF_01429 6.2e-184
JAPFAENF_01430 9.9e-239 brnQ U Component of the transport system for branched-chain amino acids
JAPFAENF_01431 3.6e-202 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
JAPFAENF_01432 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
JAPFAENF_01433 6.3e-191 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
JAPFAENF_01434 6.8e-212 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
JAPFAENF_01435 9.6e-157 G Fructosamine kinase
JAPFAENF_01436 1.8e-156 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
JAPFAENF_01437 4.4e-133 S PAC2 family
JAPFAENF_01443 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JAPFAENF_01444 7.7e-111 hit 2.7.7.53 FG HIT domain
JAPFAENF_01445 2e-111 yebC K transcriptional regulatory protein
JAPFAENF_01446 2.7e-100 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
JAPFAENF_01447 9.4e-107 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
JAPFAENF_01448 2.7e-199 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
JAPFAENF_01449 3.6e-52 yajC U Preprotein translocase subunit
JAPFAENF_01450 2.5e-98 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JAPFAENF_01451 3.1e-223 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
JAPFAENF_01452 2.9e-165 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
JAPFAENF_01453 3.3e-234
JAPFAENF_01454 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
JAPFAENF_01455 4.1e-31
JAPFAENF_01456 2.3e-117 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
JAPFAENF_01457 4.5e-143 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
JAPFAENF_01458 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
JAPFAENF_01460 1.4e-161 supH S Sucrose-6F-phosphate phosphohydrolase
JAPFAENF_01461 2.1e-290 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
JAPFAENF_01462 0.0 pafB K WYL domain
JAPFAENF_01463 6.8e-53
JAPFAENF_01464 0.0 helY L DEAD DEAH box helicase
JAPFAENF_01465 5.1e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
JAPFAENF_01466 8.2e-139 pgp 3.1.3.18 S HAD-hyrolase-like
JAPFAENF_01467 5.4e-39
JAPFAENF_01468 1.5e-65
JAPFAENF_01469 1.1e-110 K helix_turn_helix, mercury resistance
JAPFAENF_01470 6.7e-75 garA T Inner membrane component of T3SS, cytoplasmic domain
JAPFAENF_01471 2.2e-140 S Bacterial protein of unknown function (DUF881)
JAPFAENF_01472 3.9e-35 sbp S Protein of unknown function (DUF1290)
JAPFAENF_01473 3.9e-168 S Bacterial protein of unknown function (DUF881)
JAPFAENF_01474 3e-105 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JAPFAENF_01475 8.7e-156 hisG 2.4.2.17 F ATP phosphoribosyltransferase
JAPFAENF_01476 9.9e-42 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
JAPFAENF_01477 9.4e-113 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
JAPFAENF_01478 9e-186 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JAPFAENF_01479 1e-159 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
JAPFAENF_01480 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
JAPFAENF_01481 6.5e-133 S SOS response associated peptidase (SRAP)
JAPFAENF_01482 2.9e-151 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
JAPFAENF_01483 2e-258 mmuP E amino acid
JAPFAENF_01485 3.8e-190 V VanZ like family
JAPFAENF_01486 6.2e-15 cefD 5.1.1.17 E Aminotransferase, class V
JAPFAENF_01487 3.3e-35 cefD 5.1.1.17 E Aminotransferase class-V
JAPFAENF_01488 1.7e-34 S Uncharacterized protein conserved in bacteria (DUF2316)
JAPFAENF_01489 3.3e-100 S Acetyltransferase (GNAT) domain
JAPFAENF_01490 2.5e-43 V MacB-like periplasmic core domain
JAPFAENF_01491 2.3e-38 relB L RelB antitoxin
JAPFAENF_01492 1.4e-49 S Bacterial toxin of type II toxin-antitoxin system, YafQ
JAPFAENF_01493 1.5e-25 2.7.13.3 T Histidine kinase
JAPFAENF_01494 6.8e-43 G Transporter major facilitator family protein
JAPFAENF_01495 2.6e-294 mmuP E amino acid
JAPFAENF_01497 5.6e-64 yeaO K Protein of unknown function, DUF488
JAPFAENF_01498 1.3e-75
JAPFAENF_01499 5.7e-162 3.6.4.12
JAPFAENF_01500 2e-93 yijF S Domain of unknown function (DUF1287)
JAPFAENF_01501 5.4e-297 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JAPFAENF_01502 1.5e-70 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
JAPFAENF_01503 6.1e-140 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
JAPFAENF_01504 9.1e-98 3.5.1.124 S DJ-1/PfpI family
JAPFAENF_01505 1.9e-222 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
JAPFAENF_01506 2.4e-173 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
JAPFAENF_01507 2.6e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
JAPFAENF_01508 2.8e-134 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
JAPFAENF_01509 4.5e-144 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JAPFAENF_01510 4.1e-142 rpsB J Belongs to the universal ribosomal protein uS2 family
JAPFAENF_01511 1.7e-87 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
JAPFAENF_01512 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
JAPFAENF_01513 3.3e-91
JAPFAENF_01514 5.8e-208 guaB 1.1.1.205 F IMP dehydrogenase family protein
JAPFAENF_01515 4.6e-243 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
JAPFAENF_01516 1.2e-257 G ABC transporter substrate-binding protein
JAPFAENF_01517 3.6e-87 M Peptidase family M23
JAPFAENF_01519 7.1e-167 xerH L Phage integrase family
JAPFAENF_01521 2.8e-134 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
JAPFAENF_01522 6e-87 K Psort location Cytoplasmic, score
JAPFAENF_01523 2.3e-29 S Fic/DOC family
JAPFAENF_01527 4.8e-58 ard S Antirestriction protein (ArdA)
JAPFAENF_01528 1e-08
JAPFAENF_01529 9.3e-86 M G5 domain protein
JAPFAENF_01530 9.1e-69
JAPFAENF_01532 2.2e-67 trxB1 1.8.1.9 C Thioredoxin domain
JAPFAENF_01533 3.1e-22 trxB1 1.8.1.9 C Thioredoxin domain
JAPFAENF_01534 2.1e-188 oppA5 E family 5
JAPFAENF_01535 3.6e-121 appB P PFAM binding-protein-dependent transport systems inner membrane component
JAPFAENF_01536 9.6e-89 appC EP PFAM binding-protein-dependent transport systems inner membrane component
JAPFAENF_01537 1.5e-150 P Belongs to the ABC transporter superfamily
JAPFAENF_01538 1.9e-35 ybfG M Domain of unknown function (DUF1906)
JAPFAENF_01539 3.3e-38 K Addiction module
JAPFAENF_01540 2.2e-51 S Phage derived protein Gp49-like (DUF891)
JAPFAENF_01541 6.5e-12 S Psort location Extracellular, score 8.82
JAPFAENF_01543 2.6e-85 K Bacterial regulatory proteins, lacI family
JAPFAENF_01544 1.1e-156 P Binding-protein-dependent transport system inner membrane component
JAPFAENF_01545 1.1e-175 P Binding-protein-dependent transport system inner membrane component
JAPFAENF_01546 4.4e-266 G Bacterial extracellular solute-binding protein
JAPFAENF_01547 6.8e-245 4.2.1.68 M Enolase C-terminal domain-like
JAPFAENF_01548 4.9e-145 IQ KR domain
JAPFAENF_01549 4.3e-160 S Amidohydrolase
JAPFAENF_01550 4e-167 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
JAPFAENF_01551 0.0 3.2.1.51 GH95 G Glycosyl hydrolase family 65, N-terminal domain
JAPFAENF_01552 2.2e-156 yvgN 1.1.1.346 S Aldo/keto reductase family
JAPFAENF_01553 1.1e-53 acyP 3.6.1.7 C Acylphosphatase
JAPFAENF_01554 1.1e-253 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JAPFAENF_01555 6.8e-220 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JAPFAENF_01556 2.7e-111 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
JAPFAENF_01557 1.4e-96
JAPFAENF_01558 1.4e-121 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
JAPFAENF_01559 8.3e-131 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
JAPFAENF_01560 4.7e-279 S Uncharacterized protein conserved in bacteria (DUF2252)
JAPFAENF_01561 2.1e-265 glnA2 6.3.1.2 E glutamine synthetase
JAPFAENF_01562 1.5e-217 EGP Major facilitator Superfamily
JAPFAENF_01563 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
JAPFAENF_01564 3.4e-123 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
JAPFAENF_01565 6.9e-273 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JAPFAENF_01566 1.7e-176 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
JAPFAENF_01567 4.1e-162 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JAPFAENF_01568 6.9e-130 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JAPFAENF_01569 3e-47 M Lysin motif
JAPFAENF_01570 8.4e-78 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JAPFAENF_01571 7.5e-230 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
JAPFAENF_01572 0.0 L DNA helicase
JAPFAENF_01573 2.9e-93 mraZ K Belongs to the MraZ family
JAPFAENF_01574 1.8e-190 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
JAPFAENF_01575 4e-67 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
JAPFAENF_01576 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
JAPFAENF_01577 2.6e-155 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JAPFAENF_01578 9.7e-240 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
JAPFAENF_01579 1.7e-204 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JAPFAENF_01580 3.3e-272 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JAPFAENF_01581 2.5e-225 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
JAPFAENF_01582 9.4e-217 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JAPFAENF_01583 7.5e-283 murC 6.3.2.8 M Belongs to the MurCDEF family
JAPFAENF_01584 2.5e-173 ftsQ 6.3.2.4 D Cell division protein FtsQ
JAPFAENF_01585 7e-15
JAPFAENF_01586 2.7e-47 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
JAPFAENF_01587 4.7e-168 2.7.1.4 G pfkB family carbohydrate kinase
JAPFAENF_01588 3.4e-222 GK ROK family
JAPFAENF_01589 2.2e-165 2.7.1.2 GK ROK family
JAPFAENF_01590 6.9e-209 GK ROK family
JAPFAENF_01591 6.2e-151 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
JAPFAENF_01592 6.5e-248 nagA 3.5.1.25 G Amidohydrolase family
JAPFAENF_01593 6.6e-98 3.6.1.55 F NUDIX domain
JAPFAENF_01594 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
JAPFAENF_01595 7.1e-300 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
JAPFAENF_01596 0.0 smc D Required for chromosome condensation and partitioning
JAPFAENF_01597 2.8e-79 V Acetyltransferase (GNAT) domain
JAPFAENF_01598 6.9e-192 V Acetyltransferase (GNAT) domain
JAPFAENF_01599 3.3e-294 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JAPFAENF_01600 1.8e-136 sigH K Belongs to the sigma-70 factor family. ECF subfamily
JAPFAENF_01601 5.6e-52
JAPFAENF_01602 4.3e-188 galM 5.1.3.3 G Aldose 1-epimerase
JAPFAENF_01603 4.2e-191 galM 5.1.3.3 G Aldose 1-epimerase
JAPFAENF_01604 7.5e-183 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
JAPFAENF_01605 4.2e-89 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JAPFAENF_01606 1.3e-196 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
JAPFAENF_01607 1.4e-133 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
JAPFAENF_01608 1.1e-11 S Spermine/spermidine synthase domain
JAPFAENF_01609 1.7e-113 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
JAPFAENF_01610 6.2e-25 rpmI J Ribosomal protein L35
JAPFAENF_01611 6.2e-61 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JAPFAENF_01612 3.1e-196 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
JAPFAENF_01613 4.4e-145 xerD D recombinase XerD
JAPFAENF_01614 1.2e-148 soj D CobQ CobB MinD ParA nucleotide binding domain protein
JAPFAENF_01615 7.4e-153 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JAPFAENF_01616 2.3e-117 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JAPFAENF_01617 6.1e-154 nrtR 3.6.1.55 F NUDIX hydrolase
JAPFAENF_01618 2.7e-249 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
JAPFAENF_01619 4.6e-299 nadB 1.3.5.4, 1.4.3.16, 2.4.2.19 H Catalyzes the oxidation of L-aspartate to iminoaspartate
JAPFAENF_01620 1.1e-161 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, N-terminal domain
JAPFAENF_01621 1.8e-237 iscS1 2.8.1.7 E Aminotransferase class-V
JAPFAENF_01622 5.9e-19 naiP U Sugar (and other) transporter
JAPFAENF_01623 0.0 V FtsX-like permease family
JAPFAENF_01624 4.8e-137 V ATPases associated with a variety of cellular activities
JAPFAENF_01625 7e-107 K Virulence activator alpha C-term
JAPFAENF_01626 0.0 typA T Elongation factor G C-terminus
JAPFAENF_01627 3.4e-79
JAPFAENF_01628 2.2e-187 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
JAPFAENF_01629 5.5e-189 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
JAPFAENF_01630 4.5e-42
JAPFAENF_01631 0.0 MV MacB-like periplasmic core domain
JAPFAENF_01632 4.9e-148 V ABC transporter, ATP-binding protein
JAPFAENF_01633 2.1e-188 xerC D Belongs to the 'phage' integrase family. XerC subfamily
JAPFAENF_01634 0.0 E ABC transporter, substrate-binding protein, family 5
JAPFAENF_01635 8.9e-154 dppB EP Binding-protein-dependent transport system inner membrane component
JAPFAENF_01636 4.5e-167 dppC EP N-terminal TM domain of oligopeptide transport permease C
JAPFAENF_01637 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
JAPFAENF_01638 4.8e-170 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
JAPFAENF_01639 4.8e-154 S Protein of unknown function (DUF3710)
JAPFAENF_01640 3.8e-134 S Protein of unknown function (DUF3159)
JAPFAENF_01641 3.1e-242 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JAPFAENF_01642 6.9e-96
JAPFAENF_01643 0.0 ctpE P E1-E2 ATPase
JAPFAENF_01644 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
JAPFAENF_01645 8.4e-119 E Psort location Cytoplasmic, score 8.87
JAPFAENF_01646 4.9e-82 K helix_turn_helix, Lux Regulon
JAPFAENF_01647 2e-136 ybhL S Belongs to the BI1 family
JAPFAENF_01648 1.4e-165 ydeD EG EamA-like transporter family
JAPFAENF_01649 5.2e-150 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
JAPFAENF_01650 3.1e-278 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JAPFAENF_01651 4.3e-183 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JAPFAENF_01652 2.9e-152 fic D Fic/DOC family
JAPFAENF_01653 0.0 ftsK D FtsK SpoIIIE family protein
JAPFAENF_01654 2.3e-116 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JAPFAENF_01655 6.2e-94 cinA 3.5.1.42 S Belongs to the CinA family
JAPFAENF_01656 7.6e-78 K Helix-turn-helix XRE-family like proteins
JAPFAENF_01657 1.2e-31 S Protein of unknown function (DUF3046)
JAPFAENF_01658 1.1e-196 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
JAPFAENF_01659 3.9e-102 recX S Modulates RecA activity
JAPFAENF_01660 2.4e-113 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JAPFAENF_01661 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
JAPFAENF_01662 3e-190 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JAPFAENF_01663 2.7e-115
JAPFAENF_01664 6.2e-131 plsC2 2.3.1.51 I Phosphate acyltransferases
JAPFAENF_01665 0.0 pknL 2.7.11.1 KLT PASTA
JAPFAENF_01666 6.5e-196 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
JAPFAENF_01667 3.3e-115
JAPFAENF_01668 8.2e-191 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
JAPFAENF_01669 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
JAPFAENF_01670 4.5e-222 G Major Facilitator Superfamily
JAPFAENF_01671 3.1e-173 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JAPFAENF_01672 0.0 lhr L DEAD DEAH box helicase
JAPFAENF_01673 1.2e-48 K Psort location Cytoplasmic, score
JAPFAENF_01674 5.2e-43 K Psort location Cytoplasmic, score
JAPFAENF_01676 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
JAPFAENF_01677 1.5e-233 S Type I phosphodiesterase / nucleotide pyrophosphatase
JAPFAENF_01678 1.2e-149 S Protein of unknown function (DUF3071)
JAPFAENF_01679 1.4e-47 S Domain of unknown function (DUF4193)
JAPFAENF_01680 6.5e-84 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
JAPFAENF_01681 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JAPFAENF_01682 1.6e-99 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JAPFAENF_01683 0.0 4.2.1.53 S MCRA family
JAPFAENF_01684 1.8e-167 dkgA 1.1.1.346 C Aldo/keto reductase family
JAPFAENF_01685 3e-34 yneG S Domain of unknown function (DUF4186)
JAPFAENF_01686 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
JAPFAENF_01687 1.7e-201 K WYL domain
JAPFAENF_01688 9e-178 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
JAPFAENF_01689 5.4e-90 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
JAPFAENF_01690 5.3e-22 tccB2 V DivIVA protein
JAPFAENF_01691 4.9e-45 yggT S YGGT family
JAPFAENF_01692 5.9e-69 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
JAPFAENF_01693 1.2e-211 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JAPFAENF_01694 5.7e-249 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JAPFAENF_01695 7.4e-296 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
JAPFAENF_01696 3.7e-155 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
JAPFAENF_01697 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
JAPFAENF_01698 3e-226 O AAA domain (Cdc48 subfamily)
JAPFAENF_01699 8.7e-145 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
JAPFAENF_01700 5.6e-62 S Thiamine-binding protein
JAPFAENF_01701 2.7e-247 ydjK G Sugar (and other) transporter
JAPFAENF_01702 1.2e-213 2.7.13.3 T Histidine kinase
JAPFAENF_01703 6.1e-123 K helix_turn_helix, Lux Regulon
JAPFAENF_01704 4.5e-191
JAPFAENF_01705 1.3e-257 O SERine Proteinase INhibitors
JAPFAENF_01706 1.8e-195 K helix_turn _helix lactose operon repressor
JAPFAENF_01707 6.2e-241 lacY P LacY proton/sugar symporter
JAPFAENF_01708 1.3e-303 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
JAPFAENF_01709 3.2e-141 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
JAPFAENF_01710 5.6e-149 C Putative TM nitroreductase
JAPFAENF_01711 6.4e-198 S Glycosyltransferase, group 2 family protein
JAPFAENF_01712 1.3e-93 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
JAPFAENF_01713 0.0 ecfA GP ABC transporter, ATP-binding protein
JAPFAENF_01714 3.1e-47 yhbY J CRS1_YhbY
JAPFAENF_01715 1.6e-53 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
JAPFAENF_01716 1.5e-51
JAPFAENF_01717 1.7e-187 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
JAPFAENF_01718 2.7e-250 EGP Major facilitator Superfamily
JAPFAENF_01719 2.3e-33 mtrB 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
JAPFAENF_01721 5.2e-251 rarA L Recombination factor protein RarA
JAPFAENF_01722 0.0 helY L DEAD DEAH box helicase
JAPFAENF_01723 4e-198 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
JAPFAENF_01724 6.3e-287 ydfD EK Alanine-glyoxylate amino-transferase
JAPFAENF_01725 1.3e-111 argO S LysE type translocator
JAPFAENF_01726 1.3e-290 phoN I PAP2 superfamily
JAPFAENF_01727 4.7e-194 gluD E Binding-protein-dependent transport system inner membrane component
JAPFAENF_01728 1.2e-110 gluC E Binding-protein-dependent transport system inner membrane component
JAPFAENF_01729 2.2e-145 gluB ET Belongs to the bacterial solute-binding protein 3 family
JAPFAENF_01730 5.2e-153 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
JAPFAENF_01731 5.8e-100 S Aminoacyl-tRNA editing domain
JAPFAENF_01732 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
JAPFAENF_01733 5.9e-261 hisS 6.1.1.21 J Histidyl-tRNA synthetase
JAPFAENF_01734 4.4e-224 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
JAPFAENF_01735 0.0 3.1.3.5 F 5'-nucleotidase, C-terminal domain
JAPFAENF_01736 8.4e-142 3.5.2.10 S Creatinine amidohydrolase
JAPFAENF_01737 2.9e-249 proP EGP Sugar (and other) transporter
JAPFAENF_01739 5.5e-278 purR QT Purine catabolism regulatory protein-like family
JAPFAENF_01740 6.8e-256 codA 3.5.4.1, 3.5.4.21 F Amidohydrolase family
JAPFAENF_01741 0.0 clpC O ATPase family associated with various cellular activities (AAA)
JAPFAENF_01742 5.4e-178 uspA T Belongs to the universal stress protein A family
JAPFAENF_01743 7.7e-178 S Protein of unknown function (DUF3027)
JAPFAENF_01744 1.7e-66 cspB K 'Cold-shock' DNA-binding domain
JAPFAENF_01745 1.7e-308 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
JAPFAENF_01746 2e-132 KT Response regulator receiver domain protein
JAPFAENF_01747 4.3e-99
JAPFAENF_01748 4.2e-33 S Proteins of 100 residues with WXG
JAPFAENF_01749 2.7e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
JAPFAENF_01750 6.1e-38 K 'Cold-shock' DNA-binding domain
JAPFAENF_01751 4e-84 S LytR cell envelope-related transcriptional attenuator
JAPFAENF_01752 3.8e-133 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
JAPFAENF_01753 5.4e-187 moxR S ATPase family associated with various cellular activities (AAA)
JAPFAENF_01754 1.3e-163 S Protein of unknown function DUF58
JAPFAENF_01755 3.9e-85
JAPFAENF_01756 2.6e-189 S von Willebrand factor (vWF) type A domain
JAPFAENF_01757 1.1e-152 S von Willebrand factor (vWF) type A domain
JAPFAENF_01758 3.1e-56
JAPFAENF_01759 3.1e-255 S PGAP1-like protein
JAPFAENF_01760 1.4e-110 ykoE S ABC-type cobalt transport system, permease component
JAPFAENF_01761 3.3e-280 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
JAPFAENF_01762 0.0 S Lysylphosphatidylglycerol synthase TM region
JAPFAENF_01763 2.4e-41 hup L Belongs to the bacterial histone-like protein family
JAPFAENF_01764 3.5e-285 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
JAPFAENF_01766 8.9e-175 hisN 3.1.3.25 G Inositol monophosphatase family
JAPFAENF_01767 0.0 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
JAPFAENF_01768 2.1e-134 alsE 5.1.3.1 G Ribulose-phosphate 3 epimerase family
JAPFAENF_01769 1.7e-162 G Phosphotransferase System
JAPFAENF_01770 1e-45 fruA 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
JAPFAENF_01771 2.6e-77 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JAPFAENF_01772 3e-72 H Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JAPFAENF_01773 2.6e-280 manR K PRD domain
JAPFAENF_01774 7.6e-137 3.8.1.2 S Haloacid dehalogenase-like hydrolase
JAPFAENF_01775 2.3e-287 arc O AAA ATPase forming ring-shaped complexes
JAPFAENF_01776 4.2e-124 apl 3.1.3.1 S SNARE associated Golgi protein
JAPFAENF_01777 6.6e-120 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
JAPFAENF_01778 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JAPFAENF_01779 3.3e-132 3.8.1.2 S Haloacid dehalogenase-like hydrolase
JAPFAENF_01780 1.8e-184 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JAPFAENF_01781 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
JAPFAENF_01782 4.2e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
JAPFAENF_01783 7.2e-228 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
JAPFAENF_01784 9e-150 G Fic/DOC family
JAPFAENF_01786 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
JAPFAENF_01787 8.5e-255 3.6.4.12 K Putative DNA-binding domain
JAPFAENF_01788 4.4e-79 hsdS 3.1.21.3 V type I restriction modification DNA specificity domain
JAPFAENF_01789 4.3e-23 S MobA MobL family protein
JAPFAENF_01790 1.9e-52 L Psort location Cytoplasmic, score 8.96
JAPFAENF_01792 6.5e-137 M Mechanosensitive ion channel
JAPFAENF_01793 1.5e-186 S CAAX protease self-immunity
JAPFAENF_01794 4.8e-238 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
JAPFAENF_01795 1.4e-151 U Binding-protein-dependent transport system inner membrane component
JAPFAENF_01796 9.9e-161 U Binding-protein-dependent transport system inner membrane component
JAPFAENF_01797 9.9e-219 P Bacterial extracellular solute-binding protein
JAPFAENF_01798 1.1e-228 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
JAPFAENF_01799 3.9e-179 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
JAPFAENF_01800 8.8e-189 plsC2 2.3.1.51 I Phosphate acyltransferases
JAPFAENF_01801 3.6e-64 psp1 3.5.99.10 J Endoribonuclease L-PSP
JAPFAENF_01804 2e-117 cyaA 4.6.1.1 S CYTH
JAPFAENF_01805 4.5e-172 trxA2 O Tetratricopeptide repeat
JAPFAENF_01806 6.6e-179
JAPFAENF_01807 2e-185
JAPFAENF_01808 1.2e-158 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
JAPFAENF_01809 1.4e-130 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
JAPFAENF_01810 9.4e-49 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
JAPFAENF_01811 2.1e-282 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JAPFAENF_01812 6.1e-163 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JAPFAENF_01813 8.5e-309 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
JAPFAENF_01814 2.4e-150 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JAPFAENF_01815 2.9e-61 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JAPFAENF_01816 1.7e-29 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JAPFAENF_01817 6.4e-148 atpB C it plays a direct role in the translocation of protons across the membrane
JAPFAENF_01818 1.6e-207 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
JAPFAENF_01822 1.9e-27
JAPFAENF_01824 7.6e-42
JAPFAENF_01825 6.2e-23
JAPFAENF_01826 1.6e-129 L HNH endonuclease
JAPFAENF_01827 8.8e-50
JAPFAENF_01828 2.2e-276 S Terminase
JAPFAENF_01829 1e-207 S Phage portal protein
JAPFAENF_01830 1.1e-265 S Caudovirus prohead serine protease
JAPFAENF_01831 1.1e-32
JAPFAENF_01832 4.4e-26
JAPFAENF_01833 4.1e-58
JAPFAENF_01834 9.7e-54
JAPFAENF_01835 7.6e-37
JAPFAENF_01836 5e-156 NT phage tail tape measure protein
JAPFAENF_01837 7.6e-110
JAPFAENF_01838 1.6e-14
JAPFAENF_01839 1.3e-31 S Bacteriophage holin family
JAPFAENF_01840 2.7e-83 3.2.1.20, 3.5.1.28 GH31 V N-acetylmuramoyl-L-alanine amidase
JAPFAENF_01841 9e-89 L Phage integrase family
JAPFAENF_01842 0.0 K RNA polymerase II activating transcription factor binding
JAPFAENF_01843 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
JAPFAENF_01844 4e-92 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
JAPFAENF_01845 1.3e-97 mntP P Probably functions as a manganese efflux pump
JAPFAENF_01846 4.6e-118
JAPFAENF_01847 4e-139 KT Transcriptional regulatory protein, C terminal
JAPFAENF_01848 3.7e-125 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JAPFAENF_01849 1.6e-277 E Bacterial extracellular solute-binding proteins, family 5 Middle
JAPFAENF_01850 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
JAPFAENF_01851 0.0 S domain protein
JAPFAENF_01852 1e-63 tyrA 5.4.99.5 E Chorismate mutase type II
JAPFAENF_01853 1.4e-131 rafA 3.2.1.22 G alpha-galactosidase
JAPFAENF_01854 7.6e-115 araQ U Binding-protein-dependent transport system inner membrane component
JAPFAENF_01855 9.5e-121 lacF P Binding-protein-dependent transport system inner membrane component
JAPFAENF_01856 2.8e-153 araN G Bacterial extracellular solute-binding protein
JAPFAENF_01857 5.1e-50 K helix_turn_helix, arabinose operon control protein
JAPFAENF_01859 2.4e-242 topB 5.99.1.2 L DNA topoisomerase
JAPFAENF_01862 1.3e-16 K Bacterial mobilisation protein (MobC)
JAPFAENF_01863 2.2e-36 S Pfam:CtkA_N
JAPFAENF_01865 6.3e-34 ecoRIIR 3.1.21.4 L EcoRII C terminal
JAPFAENF_01866 7.2e-141 S Fic/DOC family
JAPFAENF_01867 2.8e-137 L PFAM Relaxase mobilization nuclease family protein
JAPFAENF_01868 4.5e-87 2.7.11.1 S HipA-like C-terminal domain
JAPFAENF_01870 1.5e-38
JAPFAENF_01871 2.9e-51 S Domain of unknown function (DUF4913)
JAPFAENF_01872 3.5e-231 U TraM recognition site of TraD and TraG
JAPFAENF_01873 2.5e-22
JAPFAENF_01874 3.3e-08
JAPFAENF_01877 8.9e-202 traD S COG0433 Predicted ATPase
JAPFAENF_01878 4.9e-186
JAPFAENF_01879 7.6e-142
JAPFAENF_01880 1.7e-29
JAPFAENF_01881 9.1e-33
JAPFAENF_01882 9.7e-07
JAPFAENF_01883 8e-21
JAPFAENF_01884 0.0 XK27_00515 D Cell surface antigen C-terminus
JAPFAENF_01885 7.4e-132 L Transposase
JAPFAENF_01886 1.6e-46 pabC 2.6.1.42, 4.1.3.38 EH Amino-transferase class IV
JAPFAENF_01887 5.6e-291 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JAPFAENF_01888 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
JAPFAENF_01889 3.3e-52 S Protein of unknown function (DUF2469)
JAPFAENF_01890 3.1e-195 2.3.1.57 J Acetyltransferase (GNAT) domain
JAPFAENF_01891 7.4e-283 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JAPFAENF_01892 1.5e-286 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
JAPFAENF_01893 9.1e-51 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JAPFAENF_01894 9.6e-160 K Psort location Cytoplasmic, score
JAPFAENF_01895 1.7e-177
JAPFAENF_01896 1.1e-167 V ABC transporter
JAPFAENF_01897 1.5e-169 spoU 2.1.1.185 J RNA methyltransferase TrmH family
JAPFAENF_01898 1.6e-109 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JAPFAENF_01899 4.6e-210 rmuC S RmuC family
JAPFAENF_01900 3.3e-43 csoR S Metal-sensitive transcriptional repressor
JAPFAENF_01901 0.0 pacS 1.9.3.1, 3.6.3.54 P E1-E2 ATPase
JAPFAENF_01902 1.9e-130 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
JAPFAENF_01903 8e-08 ssb L Single-strand binding protein family
JAPFAENF_01904 2.4e-131 alfA 3.2.1.51 GH29 G Alpha-L-fucosidase
JAPFAENF_01905 6.1e-94 uhpT EGP Major facilitator Superfamily
JAPFAENF_01906 7.4e-201 EGP Major Facilitator Superfamily
JAPFAENF_01907 6.5e-210 2.7.13.3 T Histidine kinase
JAPFAENF_01908 1.3e-111 K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
JAPFAENF_01909 3.1e-130 V ABC transporter
JAPFAENF_01910 1.9e-116
JAPFAENF_01911 8.9e-159 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
JAPFAENF_01914 7.7e-71 rplI J Binds to the 23S rRNA
JAPFAENF_01915 2.6e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JAPFAENF_01916 4e-76 ssb1 L Single-stranded DNA-binding protein
JAPFAENF_01917 4.6e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
JAPFAENF_01918 1.3e-187 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JAPFAENF_01919 2.2e-154 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JAPFAENF_01920 8.3e-300 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
JAPFAENF_01921 8.7e-85 K Periplasmic binding protein domain
JAPFAENF_01922 0.0 ubiB S ABC1 family
JAPFAENF_01923 5.5e-38 S granule-associated protein
JAPFAENF_01924 2.7e-140 cobQ S CobB/CobQ-like glutamine amidotransferase domain
JAPFAENF_01925 8.2e-111 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
JAPFAENF_01926 3.8e-29 L transposase activity
JAPFAENF_01927 3.3e-155 ksgA 2.1.1.182, 2.1.1.184 J Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family
JAPFAENF_01928 2.8e-22 V Type II restriction enzyme, methylase subunits
JAPFAENF_01929 1.1e-09
JAPFAENF_01930 1.1e-118
JAPFAENF_01931 0.0 XK27_09800 I Psort location CytoplasmicMembrane, score 9.99
JAPFAENF_01932 3.2e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JAPFAENF_01934 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
JAPFAENF_01935 1.7e-232 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JAPFAENF_01936 7.8e-252 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
JAPFAENF_01937 1.9e-214 ykiI
JAPFAENF_01938 5.5e-121
JAPFAENF_01940 1.2e-20 tag 3.2.2.20 L Methyladenine glycosylase
JAPFAENF_01941 1e-124 S GyrI-like small molecule binding domain
JAPFAENF_01942 1.1e-89 K Putative zinc ribbon domain
JAPFAENF_01943 1.4e-24 zntR K bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
JAPFAENF_01944 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
JAPFAENF_01945 4e-127 3.6.1.13 L NUDIX domain
JAPFAENF_01946 3.3e-177 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
JAPFAENF_01947 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JAPFAENF_01948 2.8e-124 pdtaR T Response regulator receiver domain protein
JAPFAENF_01950 1.1e-109 aspA 3.6.1.13 L NUDIX domain
JAPFAENF_01951 2.7e-274 pyk 2.7.1.40 G Pyruvate kinase
JAPFAENF_01952 2.1e-177 terC P Integral membrane protein, TerC family
JAPFAENF_01953 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
JAPFAENF_01954 1.6e-115 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
JAPFAENF_01955 3.2e-254 rpsA J Ribosomal protein S1
JAPFAENF_01957 5.8e-163 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
JAPFAENF_01958 3e-183 P Zinc-uptake complex component A periplasmic
JAPFAENF_01959 3.8e-162 znuC P ATPases associated with a variety of cellular activities
JAPFAENF_01960 4e-137 znuB U ABC 3 transport family
JAPFAENF_01961 6.2e-88 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
JAPFAENF_01962 2.1e-100 carD K CarD-like/TRCF domain
JAPFAENF_01963 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
JAPFAENF_01964 1e-128 T Response regulator receiver domain protein
JAPFAENF_01965 4.9e-196 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
JAPFAENF_01966 5e-122 ctsW S Phosphoribosyl transferase domain
JAPFAENF_01967 7.7e-146 cof 5.2.1.8 T Eukaryotic phosphomannomutase
JAPFAENF_01968 6.3e-78 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
JAPFAENF_01969 7.9e-264
JAPFAENF_01970 0.0 S Glycosyl transferase, family 2
JAPFAENF_01971 1.8e-55 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
JAPFAENF_01972 1.3e-206 K Cell envelope-related transcriptional attenuator domain
JAPFAENF_01973 0.0 D FtsK/SpoIIIE family
JAPFAENF_01974 4.9e-47 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
JAPFAENF_01975 2.2e-279 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
JAPFAENF_01976 1.2e-145 yplQ S Haemolysin-III related
JAPFAENF_01977 1.1e-15 S Bacteriophage holin family
JAPFAENF_01978 1.8e-59 3.2.1.20, 3.5.1.28 GH31 V Negative regulator of beta-lactamase expression
JAPFAENF_01979 5.5e-47 L COG1961 Site-specific recombinases, DNA invertase Pin homologs
JAPFAENF_01981 8e-145 L Recombinase
JAPFAENF_01982 5.7e-225 L Recombinase zinc beta ribbon domain
JAPFAENF_01983 4.4e-91 T Nacht domain
JAPFAENF_01984 2.8e-28 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
JAPFAENF_01985 2.4e-173 S Fic/DOC family
JAPFAENF_01986 3.3e-141 S HipA-like C-terminal domain
JAPFAENF_01987 9e-71 L Transposase, Mutator family
JAPFAENF_01988 1.2e-178 menD 2.2.1.9 H Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
JAPFAENF_01989 1.3e-46 M Glycosyltransferase like family 2
JAPFAENF_01990 2.9e-119 S Psort location CytoplasmicMembrane, score 9.99
JAPFAENF_01991 8.9e-63 C Polysaccharide pyruvyl transferase
JAPFAENF_01992 6.8e-08
JAPFAENF_01993 6.6e-52 GT4 M Psort location Cytoplasmic, score 8.87
JAPFAENF_01994 5.8e-139 M Psort location Cytoplasmic, score 8.87
JAPFAENF_01995 1.5e-31 L Transposase and inactivated derivatives IS30 family
JAPFAENF_01996 4.4e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
JAPFAENF_01997 1.4e-74 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
JAPFAENF_01998 1.2e-282 sdaA 4.3.1.17 E Serine dehydratase alpha chain
JAPFAENF_01999 2.9e-94
JAPFAENF_02000 1.7e-07 int8 L Phage integrase family
JAPFAENF_02001 5.1e-15 int8 L Phage integrase family
JAPFAENF_02002 1.6e-58 int8 L Phage integrase family
JAPFAENF_02004 8.5e-10 S Predicted membrane protein (DUF2335)
JAPFAENF_02005 1.3e-07
JAPFAENF_02008 1.1e-33
JAPFAENF_02009 5.1e-07
JAPFAENF_02010 4.2e-122 XK27_00240 K Fic/DOC family
JAPFAENF_02012 3.8e-108 L PFAM Integrase catalytic
JAPFAENF_02013 3.7e-47 L PFAM Integrase catalytic
JAPFAENF_02014 3.8e-147 K helix_turn _helix lactose operon repressor
JAPFAENF_02015 2.7e-237 bfrA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
JAPFAENF_02016 9.7e-258 M Protein of unknown function (DUF2961)
JAPFAENF_02017 2e-128 P Binding-protein-dependent transport systems inner membrane component
JAPFAENF_02018 3.3e-126 P Binding-protein-dependent transport system inner membrane component
JAPFAENF_02019 2.5e-210 G Bacterial extracellular solute-binding protein
JAPFAENF_02020 2.3e-88 pin L Resolvase, N terminal domain
JAPFAENF_02022 7.9e-255 U Spy0128-like isopeptide containing domain
JAPFAENF_02023 6.7e-147 fic D Fic/DOC family
JAPFAENF_02024 3.3e-26
JAPFAENF_02026 8.6e-11 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
JAPFAENF_02028 1.1e-41 rplV S ASCH
JAPFAENF_02029 2.7e-61 K acetyltransferase
JAPFAENF_02032 3.5e-148 S Fic/DOC family
JAPFAENF_02033 2e-146 S HipA-like C-terminal domain
JAPFAENF_02034 2.2e-134 L IstB-like ATP binding protein
JAPFAENF_02035 6.6e-244 L PFAM Integrase catalytic

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)