ORF_ID e_value Gene_name EC_number CAZy COGs Description
BEMBJPIM_00001 3e-243 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BEMBJPIM_00002 5.3e-201 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
BEMBJPIM_00003 2.2e-37 yaaA S S4 domain protein YaaA
BEMBJPIM_00004 2.2e-210 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BEMBJPIM_00005 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BEMBJPIM_00006 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BEMBJPIM_00007 5.1e-47 rpsF J Binds together with S18 to 16S ribosomal RNA
BEMBJPIM_00008 8.4e-86 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
BEMBJPIM_00009 3.3e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BEMBJPIM_00010 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
BEMBJPIM_00011 4e-75 rplI J Binds to the 23S rRNA
BEMBJPIM_00012 2e-250 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
BEMBJPIM_00013 4.4e-227 MA20_36090 S Protein of unknown function (DUF2974)
BEMBJPIM_00014 0.0 V ATPases associated with a variety of cellular activities
BEMBJPIM_00015 1.1e-68
BEMBJPIM_00017 5.8e-121 yhiD S MgtC family
BEMBJPIM_00019 2.2e-73 V ABC-type multidrug transport system, ATPase and permease components
BEMBJPIM_00020 4.7e-83 V ABC-type multidrug transport system, ATPase and permease components
BEMBJPIM_00021 6.2e-140 K LytTr DNA-binding domain
BEMBJPIM_00022 1.2e-191 2.7.13.3 T GHKL domain
BEMBJPIM_00024 5.4e-25
BEMBJPIM_00025 1.9e-303 msbA2 3.6.3.44 V ABC transporter
BEMBJPIM_00026 0.0 KLT Protein kinase domain
BEMBJPIM_00027 1e-20
BEMBJPIM_00029 2e-112 ybbL S ABC transporter, ATP-binding protein
BEMBJPIM_00030 4.6e-132 ybbM S Uncharacterised protein family (UPF0014)
BEMBJPIM_00031 3.3e-10
BEMBJPIM_00032 7.4e-251 lysA2 M Glycosyl hydrolases family 25
BEMBJPIM_00033 9.4e-11 K Acetyltransferase (GNAT) domain
BEMBJPIM_00034 9.5e-29 K Acetyltransferase (GNAT) domain
BEMBJPIM_00035 1.8e-153 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
BEMBJPIM_00036 2.9e-91 S ECF-type riboflavin transporter, S component
BEMBJPIM_00037 0.0 L Helicase C-terminal domain protein
BEMBJPIM_00038 1.4e-98 T integral membrane protein
BEMBJPIM_00039 2.3e-84 S YcxB-like protein
BEMBJPIM_00040 1.4e-72 K Transcriptional regulator
BEMBJPIM_00042 2.3e-56 qorB 1.6.5.2 GM NmrA-like family
BEMBJPIM_00043 1.3e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
BEMBJPIM_00045 1.8e-74
BEMBJPIM_00048 3.5e-31 bgl 3.2.1.21, 3.2.1.86 GT1 G beta-glucosidase activity
BEMBJPIM_00049 1.6e-190 manA 5.3.1.8 G mannose-6-phosphate isomerase
BEMBJPIM_00050 3.7e-28 scrK 2.7.1.2, 2.7.1.4 GK ROK family
BEMBJPIM_00051 3.2e-18 yliE T EAL domain
BEMBJPIM_00052 3e-139
BEMBJPIM_00053 1.6e-07
BEMBJPIM_00054 3.3e-83 K DNA-templated transcription, initiation
BEMBJPIM_00055 4.2e-135 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
BEMBJPIM_00056 1.5e-167 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
BEMBJPIM_00057 1.6e-219 S Bacterial membrane protein, YfhO
BEMBJPIM_00058 6.8e-88 S Bacterial membrane protein, YfhO
BEMBJPIM_00059 1.3e-179 yfdH GT2 M Glycosyltransferase like family 2
BEMBJPIM_00060 5.5e-92 racA K Domain of unknown function (DUF1836)
BEMBJPIM_00061 2.5e-144 yitS S EDD domain protein, DegV family
BEMBJPIM_00062 2.9e-89 T EAL domain
BEMBJPIM_00063 1.2e-103 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
BEMBJPIM_00064 4.7e-125 gpmB G Phosphoglycerate mutase family
BEMBJPIM_00065 4e-12
BEMBJPIM_00066 1.9e-119
BEMBJPIM_00067 3.3e-43
BEMBJPIM_00068 3.4e-84 S biotin transmembrane transporter activity
BEMBJPIM_00069 1.1e-42 L COG2826 Transposase and inactivated derivatives, IS30 family
BEMBJPIM_00070 4.5e-114 L the current gene model (or a revised gene model) may contain a frame shift
BEMBJPIM_00071 3.4e-137 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
BEMBJPIM_00072 3.9e-18 L haloacid dehalogenase-like hydrolase
BEMBJPIM_00073 1.4e-59 S glycolate biosynthetic process
BEMBJPIM_00074 3.9e-161 xth 3.1.11.2 L exodeoxyribonuclease III
BEMBJPIM_00075 2e-80
BEMBJPIM_00076 4.2e-172 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
BEMBJPIM_00077 4.4e-163 yvgN C Aldo keto reductase
BEMBJPIM_00078 0.0 rtpR 1.1.98.6, 1.17.4.1, 1.17.4.2 F ribonucleoside-triphosphate reductase activity
BEMBJPIM_00079 4.2e-14 S Domain of unknown function (DUF4430)
BEMBJPIM_00080 4.7e-94 S ECF transporter, substrate-specific component
BEMBJPIM_00081 1.3e-99 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S cob(I)alamin adenosyltransferase
BEMBJPIM_00082 1.3e-17 L the current gene model (or a revised gene model) may contain a frame shift
BEMBJPIM_00083 1.4e-164 L Transposase and inactivated derivatives, IS30 family
BEMBJPIM_00084 6e-188 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BEMBJPIM_00085 2.7e-94 1.1.3.15 C FAD linked oxidases, C-terminal domain
BEMBJPIM_00086 3.1e-159 1.1.3.15 C FAD linked oxidases, C-terminal domain
BEMBJPIM_00087 9.4e-74 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
BEMBJPIM_00088 9.4e-137 metQ_4 P Belongs to the nlpA lipoprotein family
BEMBJPIM_00089 4.2e-91 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
BEMBJPIM_00090 4.6e-151 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
BEMBJPIM_00091 7.1e-200 L COG2826 Transposase and inactivated derivatives, IS30 family
BEMBJPIM_00092 3.4e-14 mmgC 1.3.8.1 I Acyl-CoA dehydrogenase, C-terminal domain
BEMBJPIM_00093 5.2e-287 V ABC-type multidrug transport system, ATPase and permease components
BEMBJPIM_00094 3.9e-221 V ABC-type multidrug transport system, ATPase and permease components
BEMBJPIM_00095 1e-32 V ABC-type multidrug transport system, ATPase and permease components
BEMBJPIM_00096 3.1e-153 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
BEMBJPIM_00097 1.3e-129 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
BEMBJPIM_00098 3.6e-23 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
BEMBJPIM_00099 1.5e-129
BEMBJPIM_00100 1.2e-166 cpsY K Transcriptional regulator, LysR family
BEMBJPIM_00101 1.8e-116 2.1.1.14 E methionine synthase, vitamin-B12 independent
BEMBJPIM_00103 5.6e-172 glk 2.7.1.2 G Glucokinase
BEMBJPIM_00104 2.4e-167 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
BEMBJPIM_00105 4.5e-222 naiP EGP Major facilitator Superfamily
BEMBJPIM_00106 2.9e-96 S Membrane
BEMBJPIM_00107 3.5e-149 ydiN EGP Major Facilitator Superfamily
BEMBJPIM_00108 1.9e-172 K Transcriptional regulator, LysR family
BEMBJPIM_00109 0.0 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 C FAD binding domain
BEMBJPIM_00110 2.5e-166 arbZ I Phosphate acyltransferases
BEMBJPIM_00111 1.6e-116 arbY M Glycosyl transferase family 8
BEMBJPIM_00112 3.2e-155 arbx M Glycosyl transferase family 8
BEMBJPIM_00113 2.2e-150 arbV 2.3.1.51 I Acyl-transferase
BEMBJPIM_00115 2.6e-132 K response regulator
BEMBJPIM_00116 0.0 vicK 2.7.13.3 T Histidine kinase
BEMBJPIM_00117 5e-242 yycH S YycH protein
BEMBJPIM_00118 1.5e-141 yycI S YycH protein
BEMBJPIM_00119 8.8e-150 vicX 3.1.26.11 S domain protein
BEMBJPIM_00120 7.2e-162 htrA 3.4.21.107 O serine protease
BEMBJPIM_00121 2.8e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BEMBJPIM_00127 2.7e-61 pdxH S Pyridoxamine 5'-phosphate oxidase
BEMBJPIM_00128 9.3e-35 L Transposase and inactivated derivatives, IS30 family
BEMBJPIM_00129 5.2e-39 L COG2826 Transposase and inactivated derivatives, IS30 family
BEMBJPIM_00130 1.6e-112 P Cobalt transport protein
BEMBJPIM_00131 2e-250 cbiO1 S ABC transporter, ATP-binding protein
BEMBJPIM_00132 5.9e-269 emrY EGP Major facilitator Superfamily
BEMBJPIM_00133 1e-151 K helix_turn_helix, arabinose operon control protein
BEMBJPIM_00134 2.8e-171 natA1 S ABC transporter
BEMBJPIM_00135 1.6e-108 S ABC-2 family transporter protein
BEMBJPIM_00136 2.5e-138 S ABC-2 family transporter protein
BEMBJPIM_00138 2.2e-221 S ATP diphosphatase activity
BEMBJPIM_00139 2.2e-151 mutR K Helix-turn-helix XRE-family like proteins
BEMBJPIM_00140 4.4e-150 htpX O Belongs to the peptidase M48B family
BEMBJPIM_00141 1.6e-94 lemA S LemA family
BEMBJPIM_00142 3.5e-200 ybiR P Citrate transporter
BEMBJPIM_00143 2.8e-16
BEMBJPIM_00144 1.9e-172 L HNH nucleases
BEMBJPIM_00145 5e-114 CBM50 M NlpC P60 family protein
BEMBJPIM_00146 3.5e-140 glnQ E ABC transporter, ATP-binding protein
BEMBJPIM_00147 1.7e-274 glnP P ABC transporter permease
BEMBJPIM_00148 7.9e-122 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
BEMBJPIM_00149 1.1e-65 yeaO S Protein of unknown function, DUF488
BEMBJPIM_00150 2.5e-132 cobB K SIR2 family
BEMBJPIM_00151 6.1e-82
BEMBJPIM_00152 5.5e-283 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BEMBJPIM_00153 5.1e-181 S Alpha/beta hydrolase of unknown function (DUF915)
BEMBJPIM_00154 1.5e-127 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BEMBJPIM_00155 3.1e-162 ypuA S Protein of unknown function (DUF1002)
BEMBJPIM_00156 2.5e-160 epsV 2.7.8.12 S glycosyl transferase family 2
BEMBJPIM_00157 2.8e-125 S Alpha/beta hydrolase family
BEMBJPIM_00158 1.5e-186 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BEMBJPIM_00159 1.2e-123 luxT K Bacterial regulatory proteins, tetR family
BEMBJPIM_00160 3.7e-143
BEMBJPIM_00161 4.7e-117 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
BEMBJPIM_00162 4.5e-199 S Cysteine-rich secretory protein family
BEMBJPIM_00163 7.6e-205 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
BEMBJPIM_00164 1.8e-44
BEMBJPIM_00165 9.9e-184 yibE S overlaps another CDS with the same product name
BEMBJPIM_00166 4.5e-130 yibF S overlaps another CDS with the same product name
BEMBJPIM_00167 2.4e-169 I alpha/beta hydrolase fold
BEMBJPIM_00168 2.8e-17 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
BEMBJPIM_00169 6.6e-53 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
BEMBJPIM_00170 1.5e-101 malF P Binding-protein-dependent transport system inner membrane component
BEMBJPIM_00171 2.7e-144 malG P ABC transporter permease
BEMBJPIM_00172 0.0 G Belongs to the glycosyl hydrolase 31 family
BEMBJPIM_00173 1.5e-222 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
BEMBJPIM_00174 3e-89 ntd 2.4.2.6 F Nucleoside
BEMBJPIM_00175 1.1e-83 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BEMBJPIM_00176 1.7e-148 ptp3 3.1.3.48 T Tyrosine phosphatase family
BEMBJPIM_00177 1.2e-82 uspA T universal stress protein
BEMBJPIM_00178 2.3e-157 phnD P Phosphonate ABC transporter
BEMBJPIM_00179 3.3e-138 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
BEMBJPIM_00180 2.6e-125 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
BEMBJPIM_00181 1.1e-147 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
BEMBJPIM_00182 1.6e-286 oppA E ABC transporter, substratebinding protein
BEMBJPIM_00183 6.6e-84
BEMBJPIM_00184 1.1e-272 S Calcineurin-like phosphoesterase
BEMBJPIM_00185 0.0 asnB 6.3.5.4 E Asparagine synthase
BEMBJPIM_00186 7.6e-249 yxbA 6.3.1.12 S ATP-grasp enzyme
BEMBJPIM_00187 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
BEMBJPIM_00188 8e-142 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BEMBJPIM_00189 9.4e-33 S Iron-sulfur cluster assembly protein
BEMBJPIM_00190 3.7e-49 XK27_04775 S PAS domain
BEMBJPIM_00191 9.4e-228 yttB EGP Major facilitator Superfamily
BEMBJPIM_00192 5e-62 Z012_07300 O Glutaredoxin-related protein
BEMBJPIM_00193 0.0 pepO 3.4.24.71 O Peptidase family M13
BEMBJPIM_00194 0.0 kup P Transport of potassium into the cell
BEMBJPIM_00195 1.7e-72
BEMBJPIM_00196 2.4e-85
BEMBJPIM_00197 1.3e-28
BEMBJPIM_00198 4e-34 S Protein of unknown function (DUF2922)
BEMBJPIM_00199 4.6e-195 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
BEMBJPIM_00200 1.4e-255 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
BEMBJPIM_00201 0.0 yjbQ P TrkA C-terminal domain protein
BEMBJPIM_00202 8.4e-71 S Oxidoreductase
BEMBJPIM_00203 1e-131
BEMBJPIM_00204 3.9e-130 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BEMBJPIM_00205 8.2e-206 brpA K Cell envelope-like function transcriptional attenuator common domain protein
BEMBJPIM_00206 2.9e-108 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
BEMBJPIM_00207 0.0 XK27_08315 M Sulfatase
BEMBJPIM_00208 1.5e-52 S Responsible for the incorporation of O-acetyl groups into the enterobacterial common antigen (ECA) trisaccharide repeat units
BEMBJPIM_00209 5.5e-95 L DDE superfamily endonuclease
BEMBJPIM_00210 1.4e-98 3.6.1.55, 3.6.1.67 F NUDIX domain
BEMBJPIM_00211 6e-112 papP P ABC transporter, permease protein
BEMBJPIM_00212 4e-79 P ABC transporter permease
BEMBJPIM_00213 9.7e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
BEMBJPIM_00214 1e-159 cjaA ET ABC transporter substrate-binding protein
BEMBJPIM_00217 6.3e-243 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BEMBJPIM_00219 2.3e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
BEMBJPIM_00220 1.9e-72 E amino acid
BEMBJPIM_00221 1.2e-232 amd 3.5.1.47 E Peptidase family M20/M25/M40
BEMBJPIM_00222 1.2e-109 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
BEMBJPIM_00223 2.6e-197 mmuP E amino acid
BEMBJPIM_00224 2.8e-243 N Uncharacterized conserved protein (DUF2075)
BEMBJPIM_00225 2.4e-121 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
BEMBJPIM_00226 4.5e-12 oppA E ABC transporter, substratebinding protein
BEMBJPIM_00227 8.5e-207 oppA E ABC transporter, substratebinding protein
BEMBJPIM_00228 5.9e-294 oppA E ABC transporter, substratebinding protein
BEMBJPIM_00229 1.9e-30 oppA E transmembrane transport
BEMBJPIM_00230 1e-122 oppA E ABC transporter, substratebinding protein
BEMBJPIM_00231 9.8e-99 oppA E ABC transporter, substratebinding protein
BEMBJPIM_00232 3e-301 oppA E ABC transporter
BEMBJPIM_00233 7.5e-145 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
BEMBJPIM_00234 7.8e-183 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
BEMBJPIM_00235 3.9e-198 oppD P Belongs to the ABC transporter superfamily
BEMBJPIM_00236 2.8e-179 oppF P Belongs to the ABC transporter superfamily
BEMBJPIM_00237 2.6e-255 pepC 3.4.22.40 E aminopeptidase
BEMBJPIM_00238 2.5e-258 pepC 3.4.22.40 E Papain family cysteine protease
BEMBJPIM_00239 2.1e-73 hsp O Belongs to the small heat shock protein (HSP20) family
BEMBJPIM_00240 2.1e-79 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
BEMBJPIM_00241 4.1e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BEMBJPIM_00242 3.1e-189 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
BEMBJPIM_00243 4.5e-252 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
BEMBJPIM_00244 2.6e-64
BEMBJPIM_00245 3e-224 pbuX F xanthine permease
BEMBJPIM_00246 1.3e-99 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
BEMBJPIM_00247 1.2e-203 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
BEMBJPIM_00248 2.4e-300 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
BEMBJPIM_00249 3.4e-39 S HicA toxin of bacterial toxin-antitoxin,
BEMBJPIM_00250 5.8e-64 S HicB family
BEMBJPIM_00251 0.0 KLT Protein kinase domain
BEMBJPIM_00252 9.3e-284 V ABC-type multidrug transport system, ATPase and permease components
BEMBJPIM_00253 1.2e-78 K Transcriptional regulator
BEMBJPIM_00254 2e-31 K Transcriptional regulator
BEMBJPIM_00255 9e-243 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
BEMBJPIM_00257 3.8e-132 tcyA ET Belongs to the bacterial solute-binding protein 3 family
BEMBJPIM_00258 3.8e-131 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
BEMBJPIM_00259 2.6e-127 tcyB E ABC transporter
BEMBJPIM_00261 7.4e-130 2.4.2.3 F Phosphorylase superfamily
BEMBJPIM_00262 2.4e-250 yxbA 6.3.1.12 S ATP-grasp enzyme
BEMBJPIM_00263 1.2e-166 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
BEMBJPIM_00264 5.8e-20 mmuP E amino acid
BEMBJPIM_00265 2.7e-166 mmuP E amino acid
BEMBJPIM_00266 1.6e-174 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
BEMBJPIM_00267 8.6e-78 ywhH S Aminoacyl-tRNA editing domain
BEMBJPIM_00268 2.8e-07 pheA 1.3.1.12, 2.3.1.79, 4.2.1.51, 5.4.99.5 E Maltose acetyltransferase
BEMBJPIM_00269 1.4e-75 K DNA-binding transcription factor activity
BEMBJPIM_00270 3e-187 ansA 3.5.1.1 EJ L-asparaginase, type I
BEMBJPIM_00271 3.8e-47 Q phosphatase activity
BEMBJPIM_00272 1.1e-74 S Sucrose-6F-phosphate phosphohydrolase
BEMBJPIM_00273 2.6e-80 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
BEMBJPIM_00274 1.2e-285 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BEMBJPIM_00275 5.2e-39 L the current gene model (or a revised gene model) may contain a frame shift
BEMBJPIM_00276 2.9e-75 L the current gene model (or a revised gene model) may contain a frame shift
BEMBJPIM_00277 1.3e-107 pncA Q Isochorismatase family
BEMBJPIM_00278 5.5e-103
BEMBJPIM_00279 2e-42 L Membrane
BEMBJPIM_00280 1.7e-145 2.7.7.1, 3.6.1.55, 3.6.1.67 F NUDIX domain
BEMBJPIM_00281 1.3e-246 L Putative transposase DNA-binding domain
BEMBJPIM_00282 4.1e-41 S Enterocin A Immunity
BEMBJPIM_00284 2.9e-116 E peptidase
BEMBJPIM_00285 8.5e-137 V ABC-2 type transporter
BEMBJPIM_00286 9.9e-129 V ATPases associated with a variety of cellular activities
BEMBJPIM_00287 1.4e-37 S Aromatic-ring-opening dioxygenase LigAB, LigA subunit
BEMBJPIM_00288 6e-68 KLT Protein kinase domain
BEMBJPIM_00289 3.9e-119
BEMBJPIM_00291 3.3e-194 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
BEMBJPIM_00292 1.8e-89 comEB 3.5.4.12 F MafB19-like deaminase
BEMBJPIM_00293 1.6e-103 S TPM domain
BEMBJPIM_00294 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
BEMBJPIM_00295 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BEMBJPIM_00296 1.9e-149 tatD L hydrolase, TatD family
BEMBJPIM_00297 2.1e-97 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BEMBJPIM_00298 3e-159 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
BEMBJPIM_00299 1.9e-37 veg S Biofilm formation stimulator VEG
BEMBJPIM_00300 1.2e-149 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
BEMBJPIM_00301 1.8e-251 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BEMBJPIM_00302 1e-43
BEMBJPIM_00303 6.7e-176 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BEMBJPIM_00304 2.8e-254 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
BEMBJPIM_00305 2.5e-65 S Domain of unknown function (DUF1934)
BEMBJPIM_00306 1.1e-64 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
BEMBJPIM_00307 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
BEMBJPIM_00308 1.3e-240 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BEMBJPIM_00309 1.6e-41 rpmE2 J Ribosomal protein L31
BEMBJPIM_00310 2.7e-260 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
BEMBJPIM_00311 8.2e-239 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
BEMBJPIM_00312 9.4e-71 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
BEMBJPIM_00313 6.9e-217 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BEMBJPIM_00314 2e-126 S (CBS) domain
BEMBJPIM_00315 1.1e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
BEMBJPIM_00316 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BEMBJPIM_00317 3.2e-34 yabO J S4 domain protein
BEMBJPIM_00318 1.5e-59 divIC D Septum formation initiator
BEMBJPIM_00319 7.5e-61 yabR J S1 RNA binding domain
BEMBJPIM_00320 2.7e-249 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
BEMBJPIM_00321 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BEMBJPIM_00322 5.3e-164 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BEMBJPIM_00323 2.2e-301 E ABC transporter, substratebinding protein
BEMBJPIM_00324 1.2e-249 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
BEMBJPIM_00325 1.1e-197 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BEMBJPIM_00326 5.5e-278 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
BEMBJPIM_00328 2.7e-140 T diguanylate cyclase activity
BEMBJPIM_00330 4.1e-22 metY 2.5.1.49 E o-acetylhomoserine
BEMBJPIM_00331 2.5e-217 metY 2.5.1.49 E Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
BEMBJPIM_00332 3.7e-108 XK27_00160 S Domain of unknown function (DUF5052)
BEMBJPIM_00336 2.7e-82 yebR 1.8.4.14 T GAF domain-containing protein
BEMBJPIM_00337 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
BEMBJPIM_00340 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BEMBJPIM_00341 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BEMBJPIM_00342 9e-08 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
BEMBJPIM_00345 1e-69 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BEMBJPIM_00346 3.5e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
BEMBJPIM_00347 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BEMBJPIM_00348 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
BEMBJPIM_00349 1.8e-110 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BEMBJPIM_00350 1.6e-106 rplD J Forms part of the polypeptide exit tunnel
BEMBJPIM_00351 8.3e-45 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
BEMBJPIM_00352 2.8e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BEMBJPIM_00353 4.5e-45 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BEMBJPIM_00354 8.9e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BEMBJPIM_00355 9.4e-121 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BEMBJPIM_00356 1.9e-77 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BEMBJPIM_00357 3.7e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
BEMBJPIM_00358 3.8e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BEMBJPIM_00359 1.6e-58 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BEMBJPIM_00360 4.5e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BEMBJPIM_00361 9.3e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BEMBJPIM_00362 7.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BEMBJPIM_00363 2.8e-91 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BEMBJPIM_00364 5.7e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BEMBJPIM_00365 1.3e-85 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BEMBJPIM_00366 1.3e-24 rpmD J Ribosomal protein L30
BEMBJPIM_00367 1.8e-72 rplO J Binds to the 23S rRNA
BEMBJPIM_00368 1.1e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
BEMBJPIM_00369 5.9e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
BEMBJPIM_00370 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BEMBJPIM_00371 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BEMBJPIM_00372 1.4e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BEMBJPIM_00373 5.6e-172 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BEMBJPIM_00374 1.3e-61 rplQ J Ribosomal protein L17
BEMBJPIM_00375 7.4e-155 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BEMBJPIM_00376 4.4e-163 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BEMBJPIM_00377 2.1e-143 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BEMBJPIM_00378 6e-151 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
BEMBJPIM_00379 4.2e-77 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BEMBJPIM_00380 3.9e-66 rpsI J Belongs to the universal ribosomal protein uS9 family
BEMBJPIM_00381 3.5e-23
BEMBJPIM_00382 1.6e-45
BEMBJPIM_00383 1.6e-138 oppA E ABC transporter, substratebinding protein
BEMBJPIM_00384 3.4e-68 oppA E ABC transporter, substratebinding protein
BEMBJPIM_00385 2.7e-12 oppA E ABC transporter, substratebinding protein
BEMBJPIM_00386 1.5e-120 XK27_07525 3.6.1.55 F NUDIX domain
BEMBJPIM_00387 1.9e-52 EGP Major facilitator Superfamily
BEMBJPIM_00388 9e-48 EGP Major facilitator Superfamily
BEMBJPIM_00389 2.5e-91 S Phosphatidylethanolamine-binding protein
BEMBJPIM_00392 8.5e-226 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
BEMBJPIM_00393 8.8e-166 pfoS S Phosphotransferase system, EIIC
BEMBJPIM_00396 1.4e-56 oppA2 E ABC transporter, substratebinding protein
BEMBJPIM_00397 2.9e-215
BEMBJPIM_00398 1e-198
BEMBJPIM_00399 3.9e-125 gntR1 K UTRA
BEMBJPIM_00400 2.6e-225 L COG3547 Transposase and inactivated derivatives
BEMBJPIM_00401 4.2e-222 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
BEMBJPIM_00402 7.5e-261 epsU S Polysaccharide biosynthesis protein
BEMBJPIM_00403 4e-133 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
BEMBJPIM_00404 1e-204 csaB M Glycosyl transferases group 1
BEMBJPIM_00405 3.1e-135 M Glycosyltransferase sugar-binding region containing DXD motif
BEMBJPIM_00406 3.3e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
BEMBJPIM_00407 0.0 pacL 3.6.3.8 P P-type ATPase
BEMBJPIM_00408 1.7e-11
BEMBJPIM_00409 1.3e-108 V ABC transporter
BEMBJPIM_00410 1.8e-89 ydcK S Belongs to the SprT family
BEMBJPIM_00412 9.1e-102 S ECF transporter, substrate-specific component
BEMBJPIM_00413 3.7e-114 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
BEMBJPIM_00414 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
BEMBJPIM_00415 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BEMBJPIM_00416 1.3e-191 camS S sex pheromone
BEMBJPIM_00417 1.8e-47 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BEMBJPIM_00418 7.9e-266 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
BEMBJPIM_00419 9.2e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BEMBJPIM_00420 1.5e-169 yegS 2.7.1.107 G Lipid kinase
BEMBJPIM_00421 1.4e-117 S Protein of unknown function (DUF1211)
BEMBJPIM_00422 5.3e-256 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BEMBJPIM_00423 2e-160 L Mrr N-terminal domain
BEMBJPIM_00424 5.8e-120 cah 4.2.1.1 P Eukaryotic-type carbonic anhydrase
BEMBJPIM_00425 4.2e-98 carB 6.3.5.5 F Carbamoyl-phosphate synthase
BEMBJPIM_00426 2.2e-66 carB 6.3.5.5 C carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BEMBJPIM_00427 0.0 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
BEMBJPIM_00428 4.3e-33 copZ P Heavy-metal-associated domain
BEMBJPIM_00429 5.4e-46 D Di-iron-containing protein involved in the repair of iron-sulfur clusters
BEMBJPIM_00430 1e-111 flp 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
BEMBJPIM_00431 2.8e-214 brnQ U Component of the transport system for branched-chain amino acids
BEMBJPIM_00432 8.1e-125 alkD L DNA alkylation repair enzyme
BEMBJPIM_00433 6.7e-95 nudC 1.3.7.1, 3.6.1.22 L NUDIX domain
BEMBJPIM_00434 3.4e-70 T Gaf domain
BEMBJPIM_00435 2.7e-31 yliE T Putative diguanylate phosphodiesterase
BEMBJPIM_00437 1.2e-26 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
BEMBJPIM_00438 3.8e-52 ypaA S membrane
BEMBJPIM_00439 1.2e-85 K AsnC family
BEMBJPIM_00440 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
BEMBJPIM_00441 6.1e-52 mtlR K transcriptional antiterminator
BEMBJPIM_00443 2.6e-14 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
BEMBJPIM_00444 8.5e-45 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
BEMBJPIM_00445 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
BEMBJPIM_00446 5e-168 mleP3 S Membrane transport protein
BEMBJPIM_00447 1.9e-308 ybiT S ABC transporter, ATP-binding protein
BEMBJPIM_00448 9e-100 kgtP EGP Sugar (and other) transporter
BEMBJPIM_00449 3.1e-34 kgtP EGP Sugar (and other) transporter
BEMBJPIM_00451 2.6e-56
BEMBJPIM_00452 7.3e-217 mdtG EGP Major facilitator Superfamily
BEMBJPIM_00453 5e-120 ybhL S Belongs to the BI1 family
BEMBJPIM_00454 1.3e-142 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
BEMBJPIM_00455 2.2e-281 pipD E Dipeptidase
BEMBJPIM_00456 7.8e-210 pepA E M42 glutamyl aminopeptidase
BEMBJPIM_00457 2e-100 S ABC-type cobalt transport system, permease component
BEMBJPIM_00459 3.7e-111 udk 2.7.1.48 F Zeta toxin
BEMBJPIM_00460 3.9e-119 udk 2.7.1.48 F Zeta toxin
BEMBJPIM_00461 6.3e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
BEMBJPIM_00462 4.1e-150 glnH ET ABC transporter substrate-binding protein
BEMBJPIM_00463 2.5e-110 gluC P ABC transporter permease
BEMBJPIM_00464 5.7e-110 glnP P ABC transporter permease
BEMBJPIM_00465 2.9e-148 glnH ET Bacterial periplasmic substrate-binding proteins
BEMBJPIM_00466 9.7e-283 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
BEMBJPIM_00467 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BEMBJPIM_00468 2.3e-270 S Uncharacterized protein conserved in bacteria (DUF2252)
BEMBJPIM_00469 4e-10 S Protein of unknown function (DUF2974)
BEMBJPIM_00470 4.8e-38
BEMBJPIM_00471 5.9e-88
BEMBJPIM_00472 1.2e-161 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BEMBJPIM_00473 3.5e-120 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
BEMBJPIM_00474 3.6e-123 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BEMBJPIM_00475 7.8e-174 rihB 3.2.2.1 F Nucleoside
BEMBJPIM_00476 2.4e-130 gntR K UbiC transcription regulator-associated domain protein
BEMBJPIM_00477 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
BEMBJPIM_00479 2.9e-21 3.4.22.70 M Sortase family
BEMBJPIM_00480 2.1e-249 yhdP S Transporter associated domain
BEMBJPIM_00481 9.8e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
BEMBJPIM_00482 1.3e-227 potE E amino acid
BEMBJPIM_00483 2.7e-123 lytC 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
BEMBJPIM_00484 2.9e-208 yfmL 3.6.4.13 L DEAD DEAH box helicase
BEMBJPIM_00485 9.8e-247 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BEMBJPIM_00487 2.4e-182 pfoS S Phosphotransferase system, EIIC
BEMBJPIM_00488 1e-232 pyrP F Permease
BEMBJPIM_00489 1.1e-228 ynbB 4.4.1.1 P aluminum resistance
BEMBJPIM_00490 2.6e-177 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
BEMBJPIM_00491 2.9e-215 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
BEMBJPIM_00493 4.1e-270 E Amino acid permease
BEMBJPIM_00494 1.4e-24
BEMBJPIM_00495 8e-213 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
BEMBJPIM_00496 3.3e-51 gtcA S Teichoic acid glycosylation protein
BEMBJPIM_00497 1.3e-78 fld C Flavodoxin
BEMBJPIM_00498 3.6e-162 map 3.4.11.18 E Methionine Aminopeptidase
BEMBJPIM_00499 1.6e-49 yihY S Belongs to the UPF0761 family
BEMBJPIM_00500 7e-104 yihY S Belongs to the UPF0761 family
BEMBJPIM_00501 1.8e-170 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
BEMBJPIM_00502 7.4e-19
BEMBJPIM_00503 8.9e-181 D Alpha beta
BEMBJPIM_00504 3.5e-247 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BEMBJPIM_00505 1.7e-145 recX 2.4.1.337 GT4 S Regulatory protein RecX
BEMBJPIM_00506 4.5e-85
BEMBJPIM_00507 3e-73
BEMBJPIM_00508 1.2e-157 hlyX S Transporter associated domain
BEMBJPIM_00509 1.6e-304 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
BEMBJPIM_00510 5.4e-19
BEMBJPIM_00511 3.2e-26 mco Q Multicopper oxidase
BEMBJPIM_00512 1.1e-167 mco Q Multicopper oxidase
BEMBJPIM_00513 7e-71 mco Q Multicopper oxidase
BEMBJPIM_00514 1.1e-43 XK27_09445 S Domain of unknown function (DUF1827)
BEMBJPIM_00515 0.0 clpE O Belongs to the ClpA ClpB family
BEMBJPIM_00516 5.8e-10
BEMBJPIM_00517 1.2e-39 ptsH G phosphocarrier protein HPR
BEMBJPIM_00518 2.1e-302 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BEMBJPIM_00519 5e-69 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
BEMBJPIM_00520 5.2e-136 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
BEMBJPIM_00521 1.3e-162 coiA 3.6.4.12 S Competence protein
BEMBJPIM_00522 3.4e-112 yjbH Q Thioredoxin
BEMBJPIM_00523 3.3e-109 yjbK S CYTH
BEMBJPIM_00524 3.1e-113 yjbM 2.7.6.5 S RelA SpoT domain protein
BEMBJPIM_00525 3.9e-150 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BEMBJPIM_00526 8.2e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
BEMBJPIM_00527 2.8e-22
BEMBJPIM_00528 1.1e-147 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
BEMBJPIM_00529 3.2e-197 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
BEMBJPIM_00530 3.7e-93 sip L Belongs to the 'phage' integrase family
BEMBJPIM_00531 7.6e-07 S sequence-specific DNA binding
BEMBJPIM_00533 3.3e-18
BEMBJPIM_00535 1.7e-21 S Primase alpha helix C-terminal domain protein
BEMBJPIM_00536 2.1e-80 S Virulence-associated protein E
BEMBJPIM_00542 3.5e-64 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
BEMBJPIM_00543 2.1e-181 yubA S AI-2E family transporter
BEMBJPIM_00544 8.7e-104 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
BEMBJPIM_00545 1.9e-68 WQ51_03320 S Protein of unknown function (DUF1149)
BEMBJPIM_00546 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
BEMBJPIM_00547 3.5e-230 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
BEMBJPIM_00548 6.7e-237 S Peptidase M16
BEMBJPIM_00549 1.2e-132 IQ Enoyl-(Acyl carrier protein) reductase
BEMBJPIM_00550 2.7e-107 ymfM S Helix-turn-helix domain
BEMBJPIM_00551 2.7e-97 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BEMBJPIM_00552 4.6e-197 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BEMBJPIM_00553 5.1e-221 rny S Endoribonuclease that initiates mRNA decay
BEMBJPIM_00554 3.1e-215 tagO 2.7.8.33, 2.7.8.35 M transferase
BEMBJPIM_00555 4.7e-117 yvyE 3.4.13.9 S YigZ family
BEMBJPIM_00556 2.7e-246 comFA L Helicase C-terminal domain protein
BEMBJPIM_00557 1.9e-121 comFC S Competence protein
BEMBJPIM_00558 1.6e-97 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BEMBJPIM_00559 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
BEMBJPIM_00560 5.9e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BEMBJPIM_00561 9.1e-31
BEMBJPIM_00562 1e-173 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
BEMBJPIM_00563 2.9e-156 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BEMBJPIM_00564 6.5e-190 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
BEMBJPIM_00565 3.2e-175 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
BEMBJPIM_00566 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
BEMBJPIM_00567 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
BEMBJPIM_00568 7.4e-92 S Short repeat of unknown function (DUF308)
BEMBJPIM_00569 4.4e-146 E D-aminopeptidase
BEMBJPIM_00571 3e-81 dmpA 3.4.11.19 EQ Peptidase family S58
BEMBJPIM_00572 2.4e-164 rapZ S Displays ATPase and GTPase activities
BEMBJPIM_00573 5e-190 ybhK S Required for morphogenesis under gluconeogenic growth conditions
BEMBJPIM_00574 3.4e-169 whiA K May be required for sporulation
BEMBJPIM_00575 5.5e-101 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
BEMBJPIM_00576 5.3e-281
BEMBJPIM_00577 3.5e-16 ABC-SBP S ABC transporter substrate binding protein
BEMBJPIM_00578 8.1e-44 ABC-SBP S ABC transporter
BEMBJPIM_00579 6.3e-10 ABC-SBP S ABC transporter
BEMBJPIM_00580 3.9e-30 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
BEMBJPIM_00581 6e-98 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
BEMBJPIM_00582 1.1e-133 XK27_08845 S ABC transporter, ATP-binding protein
BEMBJPIM_00584 1.8e-212 cggR K Putative sugar-binding domain
BEMBJPIM_00585 3.8e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
BEMBJPIM_00586 3e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
BEMBJPIM_00587 2.9e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
BEMBJPIM_00588 8.3e-26 3.2.2.20 K acetyltransferase
BEMBJPIM_00589 8.6e-50 3.2.2.20 K acetyltransferase
BEMBJPIM_00590 5.5e-106
BEMBJPIM_00591 2e-158 ycsE S Sucrose-6F-phosphate phosphohydrolase
BEMBJPIM_00592 6.8e-135 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BEMBJPIM_00593 9.7e-183 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
BEMBJPIM_00594 4.2e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
BEMBJPIM_00595 1.2e-97 dnaQ 2.7.7.7 L DNA polymerase III
BEMBJPIM_00596 2.9e-162 murB 1.3.1.98 M Cell wall formation
BEMBJPIM_00597 1.4e-203 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
BEMBJPIM_00598 1.1e-144 potB P ABC transporter permease
BEMBJPIM_00599 3.9e-129 potC P ABC transporter permease
BEMBJPIM_00600 2e-205 potD P ABC transporter
BEMBJPIM_00601 4.1e-150 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BEMBJPIM_00602 4.7e-166 ybbR S YbbR-like protein
BEMBJPIM_00603 5.3e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BEMBJPIM_00604 6.8e-150 S hydrolase
BEMBJPIM_00605 1.1e-56 V peptidase activity
BEMBJPIM_00606 1.4e-77 atkY K Copper transport repressor CopY TcrY
BEMBJPIM_00607 2.5e-54 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
BEMBJPIM_00608 0.0 copA 3.6.3.54 P P-type ATPase
BEMBJPIM_00609 1.2e-64 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BEMBJPIM_00610 5e-60 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BEMBJPIM_00611 3.8e-73
BEMBJPIM_00612 1.3e-120 T diguanylate cyclase activity
BEMBJPIM_00613 3.9e-181 yliE T Putative diguanylate phosphodiesterase
BEMBJPIM_00614 4.5e-46 T Diguanylate cyclase, GGDEF domain
BEMBJPIM_00615 2.8e-185 T Diguanylate cyclase, GGDEF domain
BEMBJPIM_00616 1.5e-25
BEMBJPIM_00617 4e-66
BEMBJPIM_00618 5.3e-83 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BEMBJPIM_00619 3.6e-67 GM epimerase
BEMBJPIM_00620 0.0 E Amino acid permease
BEMBJPIM_00621 2.2e-101 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BEMBJPIM_00622 8.9e-158 rssA S Phospholipase, patatin family
BEMBJPIM_00623 7.6e-163 psaA P Belongs to the bacterial solute-binding protein 9 family
BEMBJPIM_00624 5.9e-94 S VanZ like family
BEMBJPIM_00625 1.4e-130 yebC K Transcriptional regulatory protein
BEMBJPIM_00626 4.4e-180 comGA NU Type II IV secretion system protein
BEMBJPIM_00627 2.9e-158 comGB NU type II secretion system
BEMBJPIM_00628 6.5e-51 comGC U competence protein ComGC
BEMBJPIM_00629 2.3e-75
BEMBJPIM_00631 1.9e-11 comGF U Putative Competence protein ComGF
BEMBJPIM_00632 2.8e-185 ytxK 2.1.1.72 L N-6 DNA Methylase
BEMBJPIM_00633 2.6e-222 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BEMBJPIM_00636 6.1e-134 K Transcriptional regulatory protein, C terminal
BEMBJPIM_00637 3.5e-275 T PhoQ Sensor
BEMBJPIM_00638 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
BEMBJPIM_00639 1.1e-107 vanZ V VanZ like family
BEMBJPIM_00640 6.2e-257 pgi 5.3.1.9 G Belongs to the GPI family
BEMBJPIM_00641 6.1e-85 oppA E ABC transporter, substratebinding protein
BEMBJPIM_00642 1.2e-83 oppA E ABC transporter, substratebinding protein
BEMBJPIM_00643 5.9e-82 oppA E ABC transporter, substratebinding protein
BEMBJPIM_00646 7.6e-191 ampC V Beta-lactamase
BEMBJPIM_00647 4.3e-34
BEMBJPIM_00648 8.4e-262 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain
BEMBJPIM_00649 1.4e-112 tdk 2.7.1.21 F thymidine kinase
BEMBJPIM_00650 2.1e-194 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BEMBJPIM_00651 3e-156 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
BEMBJPIM_00652 1.3e-187 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
BEMBJPIM_00653 3.4e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BEMBJPIM_00654 4.2e-127 atpB C it plays a direct role in the translocation of protons across the membrane
BEMBJPIM_00655 2e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BEMBJPIM_00656 4.2e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BEMBJPIM_00657 1.8e-93 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BEMBJPIM_00658 2.9e-279 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BEMBJPIM_00659 2.4e-170 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BEMBJPIM_00660 1.3e-247 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BEMBJPIM_00661 1.6e-73 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
BEMBJPIM_00662 3.9e-32 ywzB S Protein of unknown function (DUF1146)
BEMBJPIM_00663 1.4e-176 mbl D Cell shape determining protein MreB Mrl
BEMBJPIM_00664 1.7e-47 yidD S Could be involved in insertion of integral membrane proteins into the membrane
BEMBJPIM_00665 1.7e-34 S Protein of unknown function (DUF2969)
BEMBJPIM_00666 2.7e-219 rodA D Belongs to the SEDS family
BEMBJPIM_00667 3e-78 usp6 T universal stress protein
BEMBJPIM_00668 1.3e-42
BEMBJPIM_00669 3.6e-241 rarA L recombination factor protein RarA
BEMBJPIM_00670 1.1e-80 yueI S Protein of unknown function (DUF1694)
BEMBJPIM_00671 1.2e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
BEMBJPIM_00672 9.9e-300 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
BEMBJPIM_00673 9.2e-217 iscS2 2.8.1.7 E Aminotransferase class V
BEMBJPIM_00674 7.9e-227 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BEMBJPIM_00675 7.8e-129 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
BEMBJPIM_00676 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
BEMBJPIM_00677 2.6e-233 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
BEMBJPIM_00678 6.8e-127 S Haloacid dehalogenase-like hydrolase
BEMBJPIM_00679 2.2e-69 radC L DNA repair protein
BEMBJPIM_00680 2.6e-175 mreB D cell shape determining protein MreB
BEMBJPIM_00681 8.2e-138 mreC M Involved in formation and maintenance of cell shape
BEMBJPIM_00682 9.3e-95 mreD
BEMBJPIM_00684 5.7e-55 S Protein of unknown function (DUF3397)
BEMBJPIM_00685 4.1e-77 mraZ K Belongs to the MraZ family
BEMBJPIM_00686 1.1e-172 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
BEMBJPIM_00687 4.8e-55 ftsL D Cell division protein FtsL
BEMBJPIM_00688 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
BEMBJPIM_00689 2.7e-177 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BEMBJPIM_00690 7.3e-261 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BEMBJPIM_00691 1.2e-208 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BEMBJPIM_00692 2.3e-148 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
BEMBJPIM_00693 2.2e-241 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
BEMBJPIM_00694 1.4e-219 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BEMBJPIM_00695 1.1e-64 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
BEMBJPIM_00696 7.6e-46 yggT S YGGT family
BEMBJPIM_00697 7.7e-146 ylmH S S4 domain protein
BEMBJPIM_00698 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BEMBJPIM_00699 1.5e-32 cspA K 'Cold-shock' DNA-binding domain
BEMBJPIM_00700 2.8e-102 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
BEMBJPIM_00701 5.4e-19
BEMBJPIM_00702 3.1e-127 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BEMBJPIM_00703 2.8e-213 iscS 2.8.1.7 E Aminotransferase class V
BEMBJPIM_00704 3.2e-56 XK27_04120 S Putative amino acid metabolism
BEMBJPIM_00705 2.1e-221 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
BEMBJPIM_00706 2e-123 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
BEMBJPIM_00707 1e-103 S Repeat protein
BEMBJPIM_00708 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
BEMBJPIM_00709 6.7e-251 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
BEMBJPIM_00710 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BEMBJPIM_00711 2.7e-35 ykzG S Belongs to the UPF0356 family
BEMBJPIM_00712 4.7e-102 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
BEMBJPIM_00713 0.0 typA T GTP-binding protein TypA
BEMBJPIM_00714 2.2e-213 ftsW D Belongs to the SEDS family
BEMBJPIM_00715 1.1e-53 ylbG S UPF0298 protein
BEMBJPIM_00716 1.6e-97 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
BEMBJPIM_00717 7.5e-83 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BEMBJPIM_00718 3.9e-190 ylbL T Belongs to the peptidase S16 family
BEMBJPIM_00719 6.4e-70 comEA L Competence protein ComEA
BEMBJPIM_00720 0.0 comEC S Competence protein ComEC
BEMBJPIM_00721 3.5e-180 holA 2.7.7.7 L DNA polymerase III delta subunit
BEMBJPIM_00722 1.6e-33 rpsT J Binds directly to 16S ribosomal RNA
BEMBJPIM_00723 6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BEMBJPIM_00724 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BEMBJPIM_00725 1.7e-148
BEMBJPIM_00726 2.8e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BEMBJPIM_00727 1.1e-194 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
BEMBJPIM_00728 8.1e-51 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BEMBJPIM_00729 1.4e-170 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BEMBJPIM_00730 6.3e-108 engB D Necessary for normal cell division and for the maintenance of normal septation
BEMBJPIM_00731 2.1e-49 S Protein of unknown function (DUF2974)
BEMBJPIM_00732 9.5e-191 I Protein of unknown function (DUF2974)
BEMBJPIM_00734 2.8e-125 pnb C nitroreductase
BEMBJPIM_00736 0.0 E ABC transporter, substratebinding protein
BEMBJPIM_00737 5.4e-65
BEMBJPIM_00738 2.9e-122 1.1.1.28 CH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BEMBJPIM_00739 1.8e-189 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BEMBJPIM_00740 9e-89 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BEMBJPIM_00741 1.9e-38 aha1 P E1-E2 ATPase
BEMBJPIM_00742 0.0 aha1 P E1-E2 ATPase
BEMBJPIM_00743 3.2e-121 metQ2 P Belongs to the nlpA lipoprotein family
BEMBJPIM_00744 5.3e-187 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BEMBJPIM_00745 3.4e-113 metI P ABC transporter permease
BEMBJPIM_00746 3.2e-264 frdC 1.3.5.4 C FAD binding domain
BEMBJPIM_00747 1.6e-191 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
BEMBJPIM_00748 4.6e-120 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
BEMBJPIM_00749 1.8e-74
BEMBJPIM_00752 6.9e-71 E Methionine synthase
BEMBJPIM_00753 4.6e-227 EK Aminotransferase, class I
BEMBJPIM_00754 2.8e-168 K LysR substrate binding domain
BEMBJPIM_00755 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
BEMBJPIM_00756 1e-76 argR K Regulates arginine biosynthesis genes
BEMBJPIM_00757 3.1e-223 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BEMBJPIM_00758 2.5e-208 S Amidohydrolase
BEMBJPIM_00759 2.5e-175 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BEMBJPIM_00760 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
BEMBJPIM_00761 3.2e-183 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
BEMBJPIM_00762 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
BEMBJPIM_00763 8.1e-235 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BEMBJPIM_00764 0.0 oatA I Acyltransferase
BEMBJPIM_00765 3.7e-176 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
BEMBJPIM_00766 4.5e-138 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
BEMBJPIM_00767 1e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
BEMBJPIM_00768 6.9e-308 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
BEMBJPIM_00769 0.0 L SNF2 family N-terminal domain
BEMBJPIM_00770 2.4e-46
BEMBJPIM_00772 3.2e-98 ywlG S Belongs to the UPF0340 family
BEMBJPIM_00773 1.9e-15 gmuR K UTRA
BEMBJPIM_00774 4.8e-54 gmuR K UbiC transcription regulator-associated domain protein
BEMBJPIM_00775 4.3e-77 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BEMBJPIM_00776 1.3e-80 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BEMBJPIM_00777 9.2e-74 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BEMBJPIM_00778 4.3e-29 S Protein of unknown function (DUF2929)
BEMBJPIM_00779 0.0 dnaE 2.7.7.7 L DNA polymerase
BEMBJPIM_00780 2e-180 pfkA 2.7.1.11, 2.7.1.90 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
BEMBJPIM_00781 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
BEMBJPIM_00782 2.9e-38 ssuB P anion transmembrane transporter activity
BEMBJPIM_00784 1e-88 I Acyltransferase family
BEMBJPIM_00785 4e-164 cvfB S S1 domain
BEMBJPIM_00786 2.7e-163 xerD D recombinase XerD
BEMBJPIM_00787 8.9e-62 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
BEMBJPIM_00788 6e-129 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BEMBJPIM_00789 2.9e-105 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BEMBJPIM_00790 4.5e-129 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
BEMBJPIM_00791 6.6e-117 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BEMBJPIM_00793 3e-108 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
BEMBJPIM_00794 1.6e-211 rpsA 1.17.7.4 J Ribosomal protein S1
BEMBJPIM_00795 7.4e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
BEMBJPIM_00796 2.6e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
BEMBJPIM_00797 3.9e-229 S Tetratricopeptide repeat protein
BEMBJPIM_00798 0.0 S Bacterial membrane protein YfhO
BEMBJPIM_00799 4.7e-171 K LysR substrate binding domain
BEMBJPIM_00800 2.8e-09 K Transcriptional regulator, LysR family
BEMBJPIM_00801 2e-112 K DNA-binding transcription factor activity
BEMBJPIM_00802 1.5e-26
BEMBJPIM_00803 0.0 I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BEMBJPIM_00804 1e-69
BEMBJPIM_00805 1.1e-198 argH 2.3.1.1, 4.3.2.1 E argininosuccinate lyase
BEMBJPIM_00808 4.5e-19
BEMBJPIM_00810 6.2e-12 1.3.5.4 S FMN binding
BEMBJPIM_00811 1.2e-111 2.7.6.5 T Region found in RelA / SpoT proteins
BEMBJPIM_00812 1.7e-117 K response regulator
BEMBJPIM_00813 3.9e-229 sptS 2.7.13.3 T Histidine kinase
BEMBJPIM_00814 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
BEMBJPIM_00815 1.7e-128 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BEMBJPIM_00816 4.6e-38 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BEMBJPIM_00817 7.8e-51 S CRISPR-associated protein (Cas_Csn2)
BEMBJPIM_00818 8.5e-196 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
BEMBJPIM_00819 4.1e-215 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
BEMBJPIM_00820 4.8e-221 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
BEMBJPIM_00821 5e-222 yjjP S Putative threonine/serine exporter
BEMBJPIM_00822 1.1e-89 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BEMBJPIM_00823 2.1e-174 prmA J Ribosomal protein L11 methyltransferase
BEMBJPIM_00824 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BEMBJPIM_00825 1.1e-74 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
BEMBJPIM_00826 2.3e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
BEMBJPIM_00827 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
BEMBJPIM_00828 4e-12
BEMBJPIM_00829 4.9e-24 L Transposase
BEMBJPIM_00830 6.2e-48 L COG3547 Transposase and inactivated derivatives
BEMBJPIM_00831 1.1e-130 L COG3547 Transposase and inactivated derivatives
BEMBJPIM_00832 3.4e-225 L DDE superfamily endonuclease
BEMBJPIM_00833 2.5e-311 S Predicted membrane protein (DUF2207)
BEMBJPIM_00834 2.5e-171 K AI-2E family transporter
BEMBJPIM_00835 3e-173 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BEMBJPIM_00836 1e-32 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
BEMBJPIM_00837 7.4e-180 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
BEMBJPIM_00838 6.3e-123 IQ reductase
BEMBJPIM_00839 3.9e-226 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
BEMBJPIM_00840 1e-68 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
BEMBJPIM_00841 1.9e-77 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
BEMBJPIM_00842 3.1e-259 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
BEMBJPIM_00843 1.7e-159 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BEMBJPIM_00844 6.7e-139 accA 2.1.3.15, 6.4.1.2 I alpha subunit
BEMBJPIM_00845 2.1e-126 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
BEMBJPIM_00846 2.6e-123 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
BEMBJPIM_00848 4e-49 S Domain of Unknown Function with PDB structure (DUF3862)
BEMBJPIM_00851 2.8e-17 G Polysaccharide deacetylase
BEMBJPIM_00852 6e-143 G polysaccharide deacetylase
BEMBJPIM_00853 1.6e-51 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
BEMBJPIM_00854 1.1e-167 adhE 1.1.1.1, 1.2.1.10 C Aldehyde dehydrogenase family
BEMBJPIM_00856 1.8e-74
BEMBJPIM_00858 4.2e-161 spoU 2.1.1.185 J Methyltransferase
BEMBJPIM_00859 1.8e-80 asnB 6.3.5.4 E Aluminium induced protein
BEMBJPIM_00860 1.1e-185 asnB 6.3.5.4 E Aluminium induced protein
BEMBJPIM_00876 7.6e-92 oppA E ABC transporter, substratebinding protein
BEMBJPIM_00877 9.5e-107 oppA E ABC transporter, substratebinding protein
BEMBJPIM_00878 1.9e-13 oppA E ABC transporter, substratebinding protein
BEMBJPIM_00879 2e-36
BEMBJPIM_00880 2.5e-129 yliE T Putative diguanylate phosphodiesterase
BEMBJPIM_00883 9.1e-156 pstS P Phosphate
BEMBJPIM_00884 3.3e-161 pstC P probably responsible for the translocation of the substrate across the membrane
BEMBJPIM_00885 2.8e-157 pstA P Phosphate transport system permease protein PstA
BEMBJPIM_00886 3.2e-141 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BEMBJPIM_00887 1.8e-113 phoU P Plays a role in the regulation of phosphate uptake
BEMBJPIM_00888 1.4e-124 T Transcriptional regulatory protein, C terminal
BEMBJPIM_00889 3.2e-303 phoR 2.7.13.3 T Histidine kinase
BEMBJPIM_00890 2.1e-40 cbh 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
BEMBJPIM_00891 2.7e-84 lsa S ABC transporter
BEMBJPIM_00893 7e-121 3.6.1.13 L NUDIX domain
BEMBJPIM_00894 1.3e-182 S Glycosyl hydrolases family 18
BEMBJPIM_00895 6.6e-104 I NUDIX domain
BEMBJPIM_00896 2.6e-101 S C4-dicarboxylate anaerobic carrier
BEMBJPIM_00897 1.2e-140 cbiO2 P ABC transporter
BEMBJPIM_00898 2.1e-146 P ABC transporter
BEMBJPIM_00899 7.8e-135 cbiQ P Cobalt transport protein
BEMBJPIM_00900 8.4e-103 2.7.7.65 T phosphorelay sensor kinase activity
BEMBJPIM_00902 5e-71 yliE T Putative diguanylate phosphodiesterase
BEMBJPIM_00903 5.5e-206 yliE T Putative diguanylate phosphodiesterase
BEMBJPIM_00904 1.3e-190 2.7.7.65 T diguanylate cyclase
BEMBJPIM_00905 9e-104
BEMBJPIM_00906 5e-153 supH G Sucrose-6F-phosphate phosphohydrolase
BEMBJPIM_00908 8.3e-48 lmrA V (ABC) transporter
BEMBJPIM_00909 1e-41 V ABC transporter, ATP-binding protein
BEMBJPIM_00910 2.8e-52 V abc transporter atp-binding protein
BEMBJPIM_00911 2.1e-185 yfiC V ABC transporter
BEMBJPIM_00912 7.6e-31 yfiC V ABC transporter
BEMBJPIM_00913 1.3e-103 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
BEMBJPIM_00914 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
BEMBJPIM_00915 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
BEMBJPIM_00916 6.8e-170 ppaC 3.6.1.1 C inorganic pyrophosphatase
BEMBJPIM_00917 7.5e-194 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
BEMBJPIM_00918 3.5e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
BEMBJPIM_00919 7.7e-177 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
BEMBJPIM_00920 3.7e-168 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
BEMBJPIM_00921 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
BEMBJPIM_00922 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
BEMBJPIM_00923 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
BEMBJPIM_00924 1.2e-59 ypmB S Protein conserved in bacteria
BEMBJPIM_00925 1.1e-258 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
BEMBJPIM_00926 9.7e-115 dnaD L DnaD domain protein
BEMBJPIM_00927 7.2e-115 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BEMBJPIM_00928 6.8e-150 S Sucrose-6F-phosphate phosphohydrolase
BEMBJPIM_00929 4.8e-70 I Psort location Cytoplasmic, score
BEMBJPIM_00930 5.6e-58 I acetylesterase activity
BEMBJPIM_00931 2.7e-188 ldhA 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BEMBJPIM_00932 0.0 dap2 3.4.19.1 E Prolyl oligopeptidase family
BEMBJPIM_00933 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
BEMBJPIM_00934 2e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
BEMBJPIM_00935 2.1e-105 ypsA S Belongs to the UPF0398 family
BEMBJPIM_00936 1e-57 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
BEMBJPIM_00937 8.7e-220 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
BEMBJPIM_00938 2.3e-107 XK27_01810 S Calcineurin-like phosphoesterase
BEMBJPIM_00939 4.4e-67 XK27_01810 S Calcineurin-like phosphoesterase
BEMBJPIM_00940 2.1e-58
BEMBJPIM_00941 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
BEMBJPIM_00942 9.3e-72 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BEMBJPIM_00943 1e-170 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
BEMBJPIM_00944 3.3e-197 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
BEMBJPIM_00945 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
BEMBJPIM_00946 5.6e-43 gcvR T Belongs to the UPF0237 family
BEMBJPIM_00947 2.9e-246 XK27_08635 S UPF0210 protein
BEMBJPIM_00948 3.7e-307 FbpA K Fibronectin-binding protein
BEMBJPIM_00949 6.3e-157 degV S EDD domain protein, DegV family
BEMBJPIM_00950 2.3e-182
BEMBJPIM_00951 1.3e-165 EG EamA-like transporter family
BEMBJPIM_00952 4e-119 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BEMBJPIM_00953 1.4e-84 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BEMBJPIM_00954 1.1e-83 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BEMBJPIM_00955 7.1e-84 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BEMBJPIM_00956 1.4e-115 3.1.3.73 G phosphoglycerate mutase
BEMBJPIM_00957 4.7e-13 XK27_06780 V ABC transporter permease
BEMBJPIM_00958 6e-91 C Nitroreductase family
BEMBJPIM_00959 2.4e-45 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
BEMBJPIM_00960 3.4e-72 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
BEMBJPIM_00961 5.5e-17 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
BEMBJPIM_00962 3.3e-178 xerS L Belongs to the 'phage' integrase family
BEMBJPIM_00963 2.2e-210 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
BEMBJPIM_00964 2.9e-194 S Uncharacterized protein conserved in bacteria (DUF2325)
BEMBJPIM_00965 1.8e-72 S Sel1-like repeats.
BEMBJPIM_00966 2.1e-48 T Diguanylate cyclase, GGDEF domain
BEMBJPIM_00967 6.1e-79 GM NmrA-like family
BEMBJPIM_00968 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
BEMBJPIM_00969 1.3e-293 hsdM 2.1.1.72 V type I restriction-modification system
BEMBJPIM_00970 8e-219 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
BEMBJPIM_00971 3.2e-172 L Belongs to the 'phage' integrase family
BEMBJPIM_00972 1.7e-226 3.1.21.3 V Type I restriction modification DNA specificity domain
BEMBJPIM_00973 4.7e-33 lysR7 K LysR substrate binding domain
BEMBJPIM_00974 3.4e-37 L DDE superfamily endonuclease
BEMBJPIM_00976 3.3e-124 WQ51_05710 S Mitochondrial biogenesis AIM24
BEMBJPIM_00977 3.2e-278 oppA2 E Bacterial extracellular solute-binding proteins, family 5 Middle
BEMBJPIM_00979 9.1e-92 ybaJ Q Hypothetical methyltransferase
BEMBJPIM_00980 4.8e-21 V (ABC) transporter
BEMBJPIM_00981 0.0 carB 6.3.5.5 F Psort location Cytoplasmic, score 8.87
BEMBJPIM_00982 5.3e-155 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
BEMBJPIM_00983 7.4e-22 carA 6.3.5.5 F carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BEMBJPIM_00984 4.2e-33 T diguanylate cyclase activity
BEMBJPIM_00986 5.6e-207 V drug transmembrane transporter activity
BEMBJPIM_00987 6.1e-73 prpH 3.1.3.16 K 3.5.2 Transcription regulation
BEMBJPIM_00988 2.7e-34 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
BEMBJPIM_00989 2.5e-106 L Integrase
BEMBJPIM_00990 7.1e-68 cylB V ABC-2 type transporter
BEMBJPIM_00991 1.8e-78 S Psort location CytoplasmicMembrane, score
BEMBJPIM_00992 2.7e-76
BEMBJPIM_00993 3.1e-71 arsC 1.20.4.1 T Low molecular weight phosphotyrosine protein phosphatase
BEMBJPIM_00995 5.6e-130 cysA V ABC transporter, ATP-binding protein
BEMBJPIM_00996 5.2e-174 V FtsX-like permease family
BEMBJPIM_00997 4.2e-31 V FtsX-like permease family
BEMBJPIM_00998 1.7e-21 V FtsX-like permease family
BEMBJPIM_00999 5.4e-13 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
BEMBJPIM_01000 1.8e-28 K Bacterial regulatory helix-turn-helix protein, lysR family
BEMBJPIM_01001 7.3e-83 1.3.5.4 C FAD binding domain
BEMBJPIM_01002 1.5e-194 1.3.5.4 C FAD binding domain
BEMBJPIM_01003 1.3e-12 ps301 K Protein of unknown function (DUF4065)
BEMBJPIM_01004 2.6e-09 S Motility quorum-sensing regulator, toxin of MqsA
BEMBJPIM_01005 1.1e-16 dagK I Diacylglycerol kinase catalytic domain
BEMBJPIM_01007 3.2e-106 ydaF J Acetyltransferase (GNAT) domain
BEMBJPIM_01008 7.5e-39 S SLAP domain
BEMBJPIM_01009 1e-184 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
BEMBJPIM_01010 2.5e-253 lysC 2.7.2.4 E Belongs to the aspartokinase family
BEMBJPIM_01011 3.6e-70 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
BEMBJPIM_01012 8.3e-218 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
BEMBJPIM_01013 4e-170 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BEMBJPIM_01014 1.9e-141 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
BEMBJPIM_01015 3.1e-220 patA 2.6.1.1 E Aminotransferase
BEMBJPIM_01016 1.3e-110 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BEMBJPIM_01017 2.1e-78 S SLAP domain
BEMBJPIM_01018 3.2e-106 ydaF J Acetyltransferase (GNAT) domain
BEMBJPIM_01020 2.6e-09 S Motility quorum-sensing regulator, toxin of MqsA
BEMBJPIM_01021 1.3e-12 ps301 K Protein of unknown function (DUF4065)
BEMBJPIM_01022 1.5e-194 1.3.5.4 C FAD binding domain
BEMBJPIM_01023 7.3e-83 1.3.5.4 C FAD binding domain
BEMBJPIM_01024 1.8e-28 K Bacterial regulatory helix-turn-helix protein, lysR family
BEMBJPIM_01025 5.4e-13 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
BEMBJPIM_01026 0.0 V FtsX-like permease family
BEMBJPIM_01027 5.6e-130 cysA V ABC transporter, ATP-binding protein
BEMBJPIM_01029 3.1e-71 arsC 1.20.4.1 T Low molecular weight phosphotyrosine protein phosphatase
BEMBJPIM_01030 2.7e-76
BEMBJPIM_01031 1.8e-78 S Psort location CytoplasmicMembrane, score
BEMBJPIM_01032 7.1e-68 cylB V ABC-2 type transporter
BEMBJPIM_01033 2.5e-106 L Integrase
BEMBJPIM_01034 2.7e-34 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
BEMBJPIM_01035 6.1e-73 prpH 3.1.3.16 K 3.5.2 Transcription regulation
BEMBJPIM_01036 5.6e-207 V drug transmembrane transporter activity
BEMBJPIM_01038 4.2e-33 T diguanylate cyclase activity
BEMBJPIM_01039 7.4e-22 carA 6.3.5.5 F carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BEMBJPIM_01040 5.3e-155 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
BEMBJPIM_01041 0.0 carB 6.3.5.5 F Psort location Cytoplasmic, score 8.87
BEMBJPIM_01042 4.8e-21 V (ABC) transporter
BEMBJPIM_01043 9.1e-92 ybaJ Q Hypothetical methyltransferase
BEMBJPIM_01045 2.6e-252
BEMBJPIM_01046 4.3e-86
BEMBJPIM_01047 0.0
BEMBJPIM_01048 5.9e-266
BEMBJPIM_01049 5e-176 1.1.1.399, 1.1.1.95 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BEMBJPIM_01050 6.8e-78 K Transcriptional regulator, MarR family
BEMBJPIM_01051 2.6e-308 XK27_09600 V ABC transporter, ATP-binding protein
BEMBJPIM_01052 0.0 V ABC transporter transmembrane region
BEMBJPIM_01053 6.2e-51 P Rhodanese Homology Domain
BEMBJPIM_01054 2.7e-67 rnhA 3.1.26.4 L RNA-DNA hybrid ribonuclease activity
BEMBJPIM_01055 1e-77 rnhA 3.1.26.4 L Resolvase, N-terminal
BEMBJPIM_01056 1.4e-46 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BEMBJPIM_01057 1.2e-42 yjdJ S GCN5-related N-acetyl-transferase
BEMBJPIM_01058 1.8e-133 gph 3.1.3.18 S HAD-hyrolase-like
BEMBJPIM_01060 1.9e-130 C FAD binding domain
BEMBJPIM_01061 1.9e-228 L COG3547 Transposase and inactivated derivatives
BEMBJPIM_01062 1.5e-146 ligA 2.7.7.7, 6.5.1.2 L EXOIII
BEMBJPIM_01063 1.1e-107 yyaQ S YjbR
BEMBJPIM_01064 2e-143 ydcF S Gram-negative-bacterium-type cell wall biogenesis
BEMBJPIM_01065 1.1e-41 pat 2.3.1.183 M Acetyltransferase (GNAT) domain
BEMBJPIM_01066 3.6e-77 1.3.5.4 C FMN_bind
BEMBJPIM_01067 4e-150 1.3.5.4 C FMN_bind
BEMBJPIM_01068 4.2e-20 pat 2.3.1.183 M Acetyltransferase (GNAT) domain
BEMBJPIM_01070 1.1e-13 hsdR 3.1.21.3 V EcoEI R protein C-terminal
BEMBJPIM_01071 1.8e-231 S Domain of unknown function DUF87
BEMBJPIM_01072 2.2e-158 S SIR2-like domain
BEMBJPIM_01073 7.1e-45 3.4.21.53 O Putative ATP-dependent Lon protease
BEMBJPIM_01074 1.4e-11 S TIGR02687 family
BEMBJPIM_01075 7.4e-92 L restriction endonuclease
BEMBJPIM_01077 0.0 hsdR 3.1.21.3 F Subunit R is required for both nuclease and ATPase activities, but not for modification
BEMBJPIM_01078 1.1e-100 3.1.21.3 V Type I restriction modification DNA specificity domain
BEMBJPIM_01079 0.0 hsdM 2.1.1.72 V N-6 DNA Methylase
BEMBJPIM_01080 2e-16 relB L Addiction module antitoxin, RelB DinJ family
BEMBJPIM_01081 3e-134 L COG3547 Transposase and inactivated derivatives
BEMBJPIM_01082 5.9e-77 L COG3547 Transposase and inactivated derivatives
BEMBJPIM_01083 2.4e-158 3.4.17.13 V LD-carboxypeptidase
BEMBJPIM_01084 3.9e-265 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
BEMBJPIM_01085 1.3e-174
BEMBJPIM_01086 4.2e-138
BEMBJPIM_01087 1.3e-25
BEMBJPIM_01088 5.6e-112 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
BEMBJPIM_01089 1.1e-138 prsW S Involved in the degradation of specific anti-sigma factors
BEMBJPIM_01090 9.6e-73 metA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
BEMBJPIM_01091 9.9e-19 metA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
BEMBJPIM_01092 5.4e-34 metA 2.3.1.46 E L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
BEMBJPIM_01093 2.3e-265 gapN 1.2.1.9 C Belongs to the aldehyde dehydrogenase family
BEMBJPIM_01094 1.1e-278 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
BEMBJPIM_01095 1.3e-168 E ABC transporter, ATP-binding protein
BEMBJPIM_01096 3e-78 K Transcriptional regulator
BEMBJPIM_01097 3.4e-66 1.6.5.2 GM NmrA-like family
BEMBJPIM_01098 3.4e-166 htpX O Peptidase family M48
BEMBJPIM_01099 1.2e-227 4.4.1.8 E Aminotransferase, class I
BEMBJPIM_01100 0.0 prtS 3.4.21.110, 3.4.21.96 O Belongs to the peptidase S8 family
BEMBJPIM_01101 1.7e-18 K GNAT family
BEMBJPIM_01102 1.4e-75
BEMBJPIM_01103 9.2e-107 dedA 3.1.3.1 S SNARE associated Golgi protein
BEMBJPIM_01104 3.8e-198 asnA 6.3.1.1 F aspartate--ammonia ligase
BEMBJPIM_01105 1.4e-258 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
BEMBJPIM_01106 3.1e-231 isp2 L Transposase
BEMBJPIM_01107 1e-226 L COG3547 Transposase and inactivated derivatives
BEMBJPIM_01108 1.4e-107 galR K Transcriptional regulator
BEMBJPIM_01109 2.5e-25 K purine nucleotide biosynthetic process
BEMBJPIM_01110 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
BEMBJPIM_01111 0.0 lacS G Transporter
BEMBJPIM_01112 3.4e-26 L DDE superfamily endonuclease
BEMBJPIM_01113 6.2e-48 L COG3547 Transposase and inactivated derivatives
BEMBJPIM_01114 8.9e-153 L COG3547 Transposase and inactivated derivatives
BEMBJPIM_01115 1.5e-152 L DDE superfamily endonuclease
BEMBJPIM_01116 3.4e-25 lacA 2.3.1.18, 2.3.1.79 S Psort location Cytoplasmic, score
BEMBJPIM_01117 3.8e-21 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
BEMBJPIM_01118 3.9e-53 S Alpha beta hydrolase
BEMBJPIM_01119 2.2e-159 xerD L Phage integrase, N-terminal SAM-like domain
BEMBJPIM_01120 5.2e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
BEMBJPIM_01121 7.3e-23
BEMBJPIM_01122 3.6e-243 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
BEMBJPIM_01123 7.9e-151 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BEMBJPIM_01124 2e-121 trmK 2.1.1.217 S SAM-dependent methyltransferase
BEMBJPIM_01125 3.1e-80 mutT 3.6.1.55 F NUDIX domain
BEMBJPIM_01126 3.1e-129 S Peptidase family M23
BEMBJPIM_01127 3.3e-127 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BEMBJPIM_01129 0.0 3.4.21.53 O Putative ATP-dependent Lon protease
BEMBJPIM_01130 7.8e-240 S TIGR02687 family
BEMBJPIM_01131 0.0 V restriction
BEMBJPIM_01132 0.0 FbpA 3.1.21.3, 3.2.1.170 GH38 K RNA-binding protein homologous to eukaryotic snRNP
BEMBJPIM_01133 5.2e-56 S Domain of unknown function (DUF1788)
BEMBJPIM_01134 7.9e-58 S Putative inner membrane protein (DUF1819)
BEMBJPIM_01135 6e-206 S Protein of unknown function DUF262
BEMBJPIM_01136 9e-27
BEMBJPIM_01137 5.8e-79 L COG2826 Transposase and inactivated derivatives, IS30 family
BEMBJPIM_01138 1.1e-99 mdt(A) EGP Major facilitator Superfamily
BEMBJPIM_01139 0.0 copB 3.6.3.4 P P-type ATPase
BEMBJPIM_01140 1.2e-42 celA 3.2.1.86 GT1 G beta-glucosidase activity
BEMBJPIM_01141 2.8e-37 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
BEMBJPIM_01142 1.3e-202 K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BEMBJPIM_01143 5.3e-201 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
BEMBJPIM_01144 5.8e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
BEMBJPIM_01145 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
BEMBJPIM_01146 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
BEMBJPIM_01147 1.3e-178 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
BEMBJPIM_01148 1.5e-135 recO L Involved in DNA repair and RecF pathway recombination
BEMBJPIM_01149 6.2e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BEMBJPIM_01150 2.9e-75 cdd 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
BEMBJPIM_01151 4.6e-99 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BEMBJPIM_01152 5.4e-195 phoH T phosphate starvation-inducible protein PhoH
BEMBJPIM_01153 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
BEMBJPIM_01154 8.4e-151 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
BEMBJPIM_01156 1.9e-161 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
BEMBJPIM_01158 1.2e-07 secY2 U SecY translocase
BEMBJPIM_01159 1.5e-225 patA 2.6.1.1 E Aminotransferase
BEMBJPIM_01160 5.9e-252 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
BEMBJPIM_01163 1.8e-175 lacX 5.1.3.3 G Aldose 1-epimerase
BEMBJPIM_01164 2.4e-243 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
BEMBJPIM_01165 4e-90 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
BEMBJPIM_01166 1.8e-164 xerC D Phage integrase, N-terminal SAM-like domain
BEMBJPIM_01167 6.1e-249 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
BEMBJPIM_01168 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BEMBJPIM_01169 2e-152 dprA LU DNA protecting protein DprA
BEMBJPIM_01170 5.7e-138 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BEMBJPIM_01171 7.4e-163 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BEMBJPIM_01172 5.5e-36 yozE S Belongs to the UPF0346 family
BEMBJPIM_01173 3.3e-155 DegV S Uncharacterised protein, DegV family COG1307
BEMBJPIM_01174 4.8e-117 hlyIII S protein, hemolysin III
BEMBJPIM_01175 4.1e-220 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
BEMBJPIM_01176 4.3e-169 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
BEMBJPIM_01177 7.6e-27 yliE T Putative diguanylate phosphodiesterase
BEMBJPIM_01178 1.2e-09 yliE T Putative diguanylate phosphodiesterase
BEMBJPIM_01180 0.0 XK27_10035 V ABC transporter
BEMBJPIM_01181 1.1e-309 yfiB1 V ABC transporter, ATP-binding protein
BEMBJPIM_01182 3.7e-165 lysR7 K LysR substrate binding domain
BEMBJPIM_01183 4.5e-157
BEMBJPIM_01184 1.6e-100 3.6.1.27 I Acid phosphatase homologues
BEMBJPIM_01185 9.8e-152 yitS S Uncharacterised protein, DegV family COG1307
BEMBJPIM_01186 1.7e-243 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
BEMBJPIM_01187 2.4e-53 S Protein of unknown function (DUF2752)
BEMBJPIM_01188 4.4e-178 yjgN S Bacterial protein of unknown function (DUF898)
BEMBJPIM_01189 8e-103 S Protein of unknown function (DUF4230)
BEMBJPIM_01190 1.4e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
BEMBJPIM_01191 2.3e-260 glnPH2 P ABC transporter permease
BEMBJPIM_01192 2.4e-161 lysR5 K LysR substrate binding domain
BEMBJPIM_01193 0.0 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
BEMBJPIM_01194 3.5e-71 brpA K Cell envelope-like function transcriptional attenuator common domain protein
BEMBJPIM_01195 5.2e-52 brpA K Cell envelope-like function transcriptional attenuator common domain protein
BEMBJPIM_01196 4.1e-185 S AI-2E family transporter
BEMBJPIM_01197 5.3e-200 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
BEMBJPIM_01198 5.9e-155 czcD P cation diffusion facilitator family transporter
BEMBJPIM_01199 2.5e-49 K DNA-binding transcription factor activity
BEMBJPIM_01200 9.1e-95 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BEMBJPIM_01201 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
BEMBJPIM_01202 3.2e-33 srtA 3.4.22.70 M sortase family
BEMBJPIM_01203 9e-73 srtA 3.4.22.70 M sortase family
BEMBJPIM_01204 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
BEMBJPIM_01205 6.8e-172 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
BEMBJPIM_01206 0.0 dnaK O Heat shock 70 kDa protein
BEMBJPIM_01207 5.7e-80 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BEMBJPIM_01208 8.7e-190 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
BEMBJPIM_01209 2e-177 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
BEMBJPIM_01210 2.9e-99 sip L Belongs to the 'phage' integrase family
BEMBJPIM_01211 3.6e-40 L DDE superfamily endonuclease
BEMBJPIM_01212 6.4e-160 L DDE superfamily endonuclease
BEMBJPIM_01213 3.2e-228 L COG3547 Transposase and inactivated derivatives
BEMBJPIM_01214 6.8e-27 L Transposase
BEMBJPIM_01215 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BEMBJPIM_01216 4.3e-88 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
BEMBJPIM_01217 7.4e-32 S Uncharacterised protein family (UPF0236)
BEMBJPIM_01218 7.4e-169 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
BEMBJPIM_01219 7e-220 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
BEMBJPIM_01220 8.4e-54 cysE 2.3.1.30 E Bacterial transferase hexapeptide (six repeats)
BEMBJPIM_01221 1.8e-167 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BEMBJPIM_01222 5.5e-59 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BEMBJPIM_01223 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BEMBJPIM_01224 4.8e-42 rplGA J ribosomal protein
BEMBJPIM_01225 4.3e-43 ylxR K Protein of unknown function (DUF448)
BEMBJPIM_01226 8.3e-192 nusA K Participates in both transcription termination and antitermination
BEMBJPIM_01227 1.9e-83 rimP J Required for maturation of 30S ribosomal subunits
BEMBJPIM_01228 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BEMBJPIM_01229 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
BEMBJPIM_01230 1e-229 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
BEMBJPIM_01231 1.1e-144 cdsA 2.7.7.41 S Belongs to the CDS family
BEMBJPIM_01232 7.6e-124 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BEMBJPIM_01233 2.9e-91 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
BEMBJPIM_01234 4.9e-131 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
BEMBJPIM_01235 5.4e-184 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BEMBJPIM_01236 1.1e-136 rpsB J Belongs to the universal ribosomal protein uS2 family
BEMBJPIM_01237 2.2e-190 yabB 2.1.1.223 L Methyltransferase small domain
BEMBJPIM_01238 1.4e-115 plsC 2.3.1.51 I Acyltransferase
BEMBJPIM_01239 4.8e-182 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BEMBJPIM_01240 1.3e-251 yclM 2.7.2.4 E Belongs to the aspartokinase family
BEMBJPIM_01241 1e-212 hom 1.1.1.3 E homoserine dehydrogenase
BEMBJPIM_01242 2.6e-71 pheB 5.4.99.5 S Belongs to the UPF0735 family
BEMBJPIM_01243 0.0 mdlB V ABC transporter
BEMBJPIM_01244 0.0 mdlA V ABC transporter
BEMBJPIM_01245 2.3e-31 yneF S Uncharacterised protein family (UPF0154)
BEMBJPIM_01246 8.9e-34 ynzC S UPF0291 protein
BEMBJPIM_01247 3.5e-114 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BEMBJPIM_01248 6e-149 glcU U ribose uptake protein RbsU
BEMBJPIM_01249 1.3e-154 glnH ET ABC transporter substrate-binding protein
BEMBJPIM_01250 3.4e-97
BEMBJPIM_01251 0.0 lhr L DEAD DEAH box helicase
BEMBJPIM_01252 5.7e-247 P P-loop Domain of unknown function (DUF2791)
BEMBJPIM_01253 0.0 S TerB-C domain
BEMBJPIM_01254 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
BEMBJPIM_01255 5.5e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
BEMBJPIM_01256 0.0 snf 2.7.11.1 KL domain protein
BEMBJPIM_01258 1.8e-09 CP_1020 S Psort location Cytoplasmic, score 8.87
BEMBJPIM_01259 1.4e-138 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
BEMBJPIM_01260 6.9e-92 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BEMBJPIM_01261 2.4e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
BEMBJPIM_01262 1.2e-245 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BEMBJPIM_01263 8.6e-54 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
BEMBJPIM_01264 1.5e-73 pipD E Dipeptidase
BEMBJPIM_01265 9.7e-88 pipD E Dipeptidase
BEMBJPIM_01266 6.1e-18 pipD E Dipeptidase
BEMBJPIM_01268 2.3e-155 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
BEMBJPIM_01269 0.0 smc D Required for chromosome condensation and partitioning
BEMBJPIM_01270 3.1e-127 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
BEMBJPIM_01271 0.0 oppA E ABC transporter substrate-binding protein
BEMBJPIM_01272 0.0 oppA1 E ABC transporter substrate-binding protein
BEMBJPIM_01273 1.3e-157 oppC P Binding-protein-dependent transport system inner membrane component
BEMBJPIM_01274 7.7e-177 oppB P ABC transporter permease
BEMBJPIM_01275 1.2e-177 oppF P Belongs to the ABC transporter superfamily
BEMBJPIM_01276 3.7e-190 oppD P Belongs to the ABC transporter superfamily
BEMBJPIM_01277 5.7e-36 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
BEMBJPIM_01278 7.5e-183 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
BEMBJPIM_01279 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BEMBJPIM_01280 1.6e-278 yloV S DAK2 domain fusion protein YloV
BEMBJPIM_01281 8.8e-57 asp S Asp23 family, cell envelope-related function
BEMBJPIM_01282 3.2e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
BEMBJPIM_01283 7.8e-199 L Transposase and inactivated derivatives, IS30 family
BEMBJPIM_01285 2.5e-62
BEMBJPIM_01286 3.6e-235
BEMBJPIM_01287 5.8e-19
BEMBJPIM_01288 9e-60 L Belongs to the 'phage' integrase family
BEMBJPIM_01289 3.2e-281 V ABC transporter transmembrane region
BEMBJPIM_01292 1.1e-127 thiN 2.7.6.2 H thiamine pyrophosphokinase
BEMBJPIM_01293 2.2e-165 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
BEMBJPIM_01294 0.0 KLT serine threonine protein kinase
BEMBJPIM_01295 4.3e-138 stp 3.1.3.16 T phosphatase
BEMBJPIM_01296 5e-243 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BEMBJPIM_01297 1.5e-172 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BEMBJPIM_01298 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BEMBJPIM_01299 2.4e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
BEMBJPIM_01300 1.1e-110 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
BEMBJPIM_01301 2.6e-49
BEMBJPIM_01302 2.1e-32 oppA E transmembrane transport
BEMBJPIM_01303 2.9e-14 oppA E ABC transporter, substratebinding protein
BEMBJPIM_01304 1.6e-46 oppA E transmembrane transport
BEMBJPIM_01305 7e-306 recN L May be involved in recombinational repair of damaged DNA
BEMBJPIM_01306 7.8e-154 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
BEMBJPIM_01307 4.5e-160 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
BEMBJPIM_01308 1.7e-32 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
BEMBJPIM_01309 8e-252 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
BEMBJPIM_01310 4.3e-155 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BEMBJPIM_01311 1.8e-66 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BEMBJPIM_01312 8.1e-73 yqhY S Asp23 family, cell envelope-related function
BEMBJPIM_01313 2.4e-101 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BEMBJPIM_01314 5e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
BEMBJPIM_01315 2.1e-48 rpmA J Belongs to the bacterial ribosomal protein bL27 family
BEMBJPIM_01316 9.9e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
BEMBJPIM_01317 1.3e-65 arsC 1.20.4.1 P Belongs to the ArsC family
BEMBJPIM_01318 1.8e-90 metB 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
BEMBJPIM_01319 9.6e-56 livF E ABC transporter
BEMBJPIM_01320 1.2e-241 purD 6.3.4.13 F Belongs to the GARS family
BEMBJPIM_01321 4.3e-294 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
BEMBJPIM_01322 1.4e-109 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BEMBJPIM_01323 4.6e-199 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
BEMBJPIM_01324 6.6e-284 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BEMBJPIM_01325 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BEMBJPIM_01326 5.2e-127 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BEMBJPIM_01327 2.8e-38 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BEMBJPIM_01328 1.6e-134 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
BEMBJPIM_01329 4.4e-252 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BEMBJPIM_01330 2.5e-211 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BEMBJPIM_01331 1.1e-83 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BEMBJPIM_01332 4.8e-41 XK27_05520 S Uncharacterized protein conserved in bacteria (DUF2087)
BEMBJPIM_01333 2.2e-216 EGP Major Facilitator Superfamily
BEMBJPIM_01334 1.2e-225
BEMBJPIM_01335 0.0 S SH3-like domain
BEMBJPIM_01336 0.0 traI 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
BEMBJPIM_01338 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
BEMBJPIM_01339 1.3e-216 EGP Major facilitator Superfamily
BEMBJPIM_01340 5e-150 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
BEMBJPIM_01341 4.7e-171 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
BEMBJPIM_01342 5.7e-72 L DDE superfamily endonuclease
BEMBJPIM_01343 2.8e-14 L Transposase
BEMBJPIM_01344 1e-231 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
BEMBJPIM_01345 3.7e-130 pepO 3.4.24.71 O Peptidase family M13
BEMBJPIM_01346 8.5e-187 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BEMBJPIM_01347 2.3e-57
BEMBJPIM_01348 1.6e-70 L DDE superfamily endonuclease
BEMBJPIM_01349 5.7e-135 L DDE superfamily endonuclease
BEMBJPIM_01350 4.5e-64 S Domain of unknown function DUF1828
BEMBJPIM_01351 8.8e-218 EGP Major facilitator Superfamily
BEMBJPIM_01352 6.2e-257 glnA 6.3.1.2 E glutamine synthetase
BEMBJPIM_01353 2e-172 ynbB 4.4.1.1 P aluminum resistance
BEMBJPIM_01354 3.4e-169 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BEMBJPIM_01355 2.6e-70 yqhL P Rhodanese-like protein
BEMBJPIM_01356 2.5e-33 yqgQ S Bacterial protein of unknown function (DUF910)
BEMBJPIM_01357 1e-114 gluP 3.4.21.105 S Rhomboid family
BEMBJPIM_01358 2.1e-105 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BEMBJPIM_01359 7.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
BEMBJPIM_01360 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
BEMBJPIM_01361 0.0 S membrane
BEMBJPIM_01362 5.3e-81 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
BEMBJPIM_01363 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
BEMBJPIM_01364 7.9e-199 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BEMBJPIM_01365 2e-61 yodB K Transcriptional regulator, HxlR family
BEMBJPIM_01366 1.7e-134 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BEMBJPIM_01367 2e-45 acyP 3.6.1.7 C Belongs to the acylphosphatase family
BEMBJPIM_01368 4.4e-156 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BEMBJPIM_01369 8.6e-290 arlS 2.7.13.3 T Histidine kinase
BEMBJPIM_01370 2.9e-128 K response regulator
BEMBJPIM_01371 8.4e-102 yceD S Uncharacterized ACR, COG1399
BEMBJPIM_01372 4.3e-214 ylbM S Belongs to the UPF0348 family
BEMBJPIM_01373 1.2e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
BEMBJPIM_01374 1.9e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
BEMBJPIM_01375 2.9e-119 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BEMBJPIM_01376 1e-212 yqeH S Ribosome biogenesis GTPase YqeH
BEMBJPIM_01377 1.1e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BEMBJPIM_01378 1.8e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
BEMBJPIM_01379 2.6e-86 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BEMBJPIM_01380 1.9e-297 L Putative transposase DNA-binding domain
BEMBJPIM_01381 5.4e-113 guaB2 L Resolvase, N terminal domain
BEMBJPIM_01382 4.5e-274 S Archaea bacterial proteins of unknown function
BEMBJPIM_01383 2.3e-32
BEMBJPIM_01384 1.5e-43
BEMBJPIM_01385 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BEMBJPIM_01386 1.5e-169 dnaI L Primosomal protein DnaI
BEMBJPIM_01387 3.4e-247 dnaB L Replication initiation and membrane attachment
BEMBJPIM_01388 2.7e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BEMBJPIM_01389 2.5e-101 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BEMBJPIM_01390 3.1e-158 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
BEMBJPIM_01391 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BEMBJPIM_01392 3.5e-39 EGP Major facilitator Superfamily
BEMBJPIM_01393 8e-70 EGP Major facilitator Superfamily
BEMBJPIM_01394 2.5e-36 EGP Major facilitator Superfamily
BEMBJPIM_01395 7.8e-199 L Transposase and inactivated derivatives, IS30 family
BEMBJPIM_01396 3.8e-65 L MobA MobL family protein
BEMBJPIM_01397 2.2e-82 K Helix-turn-helix domain
BEMBJPIM_01398 4.4e-255 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
BEMBJPIM_01399 3.4e-120 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
BEMBJPIM_01400 1.2e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
BEMBJPIM_01401 5.2e-124 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
BEMBJPIM_01402 1.1e-217 ecsB U ABC transporter
BEMBJPIM_01403 1.1e-136 ecsA V ABC transporter, ATP-binding protein
BEMBJPIM_01404 1.5e-79 hit FG Scavenger mRNA decapping enzyme C-term binding
BEMBJPIM_01405 1.8e-54
BEMBJPIM_01406 5.2e-170 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
BEMBJPIM_01407 1.2e-132 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
BEMBJPIM_01408 2.3e-113 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BEMBJPIM_01409 1.1e-156 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
BEMBJPIM_01410 9.8e-52 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
BEMBJPIM_01411 4.7e-66 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F shikimate kinase activity
BEMBJPIM_01412 1.1e-178 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
BEMBJPIM_01413 0.0 L AAA domain
BEMBJPIM_01414 3.9e-226 yhaO L Ser Thr phosphatase family protein
BEMBJPIM_01415 8.1e-55 yheA S Belongs to the UPF0342 family
BEMBJPIM_01416 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
BEMBJPIM_01417 5.3e-161 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
BEMBJPIM_01418 3.9e-170 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
BEMBJPIM_01419 7.1e-27 M ErfK YbiS YcfS YnhG
BEMBJPIM_01420 5e-13 M ErfK YbiS YcfS YnhG
BEMBJPIM_01421 1e-57 3.4.22.70 M Sortase family
BEMBJPIM_01422 2.7e-59
BEMBJPIM_01423 2.1e-75 L Putative transposase DNA-binding domain
BEMBJPIM_01424 6.6e-48 L Putative transposase DNA-binding domain
BEMBJPIM_01426 2.4e-228 M ErfK YbiS YcfS YnhG
BEMBJPIM_01427 4.7e-157 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BEMBJPIM_01428 4.3e-231 dacA 3.4.16.4 M Belongs to the peptidase S11 family
BEMBJPIM_01430 1.4e-75 1.2.3.3, 3.7.1.22 EH Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BEMBJPIM_01431 1.3e-38 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
BEMBJPIM_01432 1.2e-146 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
BEMBJPIM_01433 1.6e-149
BEMBJPIM_01434 3.4e-67 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
BEMBJPIM_01435 7.5e-57 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
BEMBJPIM_01436 4.5e-82 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
BEMBJPIM_01437 1.3e-41 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
BEMBJPIM_01438 2.3e-85 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
BEMBJPIM_01439 1.9e-292 ytgP S Polysaccharide biosynthesis protein
BEMBJPIM_01440 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
BEMBJPIM_01441 1.5e-38 L COG2826 Transposase and inactivated derivatives, IS30 family
BEMBJPIM_01442 1.8e-144 L COG2826 Transposase and inactivated derivatives, IS30 family
BEMBJPIM_01443 7.8e-120 3.6.1.27 I Acid phosphatase homologues
BEMBJPIM_01444 3.4e-261 mdr EGP Sugar (and other) transporter
BEMBJPIM_01445 4.3e-217 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BEMBJPIM_01453 1.8e-74
BEMBJPIM_01454 1e-184 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
BEMBJPIM_01455 2.5e-118 dedA S SNARE-like domain protein
BEMBJPIM_01456 3.5e-106 S Protein of unknown function (DUF1461)
BEMBJPIM_01457 3.1e-144 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
BEMBJPIM_01458 1.9e-82 yutD S Protein of unknown function (DUF1027)
BEMBJPIM_01459 2.7e-279 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
BEMBJPIM_01460 5.6e-58
BEMBJPIM_01461 1.9e-181 ccpA K catabolite control protein A
BEMBJPIM_01462 5.4e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
BEMBJPIM_01464 1.4e-27 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
BEMBJPIM_01465 1.8e-41
BEMBJPIM_01466 5.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
BEMBJPIM_01467 2.7e-149 ykuT M mechanosensitive ion channel
BEMBJPIM_01468 6.7e-113 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BEMBJPIM_01469 1.7e-66 yslB S Protein of unknown function (DUF2507)
BEMBJPIM_01470 1e-53 trxA O Belongs to the thioredoxin family
BEMBJPIM_01471 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
BEMBJPIM_01472 1e-40 yrzB S Belongs to the UPF0473 family
BEMBJPIM_01473 3.9e-72 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BEMBJPIM_01474 5.7e-42 yrzL S Belongs to the UPF0297 family
BEMBJPIM_01475 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BEMBJPIM_01476 7.5e-226 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
BEMBJPIM_01477 4.1e-178 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
BEMBJPIM_01478 6.4e-207 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BEMBJPIM_01479 7.9e-282 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BEMBJPIM_01480 2.7e-35 yajC U Preprotein translocase
BEMBJPIM_01481 1.6e-185 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
BEMBJPIM_01482 6.4e-105 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
BEMBJPIM_01483 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BEMBJPIM_01484 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BEMBJPIM_01485 1.8e-290 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
BEMBJPIM_01486 8.8e-44 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BEMBJPIM_01487 1e-122 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
BEMBJPIM_01488 2.3e-302 uup S ABC transporter, ATP-binding protein
BEMBJPIM_01489 1.7e-193 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BEMBJPIM_01490 3.5e-94 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
BEMBJPIM_01491 5.5e-127 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
BEMBJPIM_01492 3.4e-89 folT S ECF transporter, substrate-specific component
BEMBJPIM_01493 2.2e-142 fat 3.1.2.21 I Acyl-ACP thioesterase
BEMBJPIM_01494 3.9e-21 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BEMBJPIM_01495 6.2e-114 fat 3.1.2.21 I Acyl-ACP thioesterase
BEMBJPIM_01496 3.8e-159 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BEMBJPIM_01497 9.9e-55 yabA L Involved in initiation control of chromosome replication
BEMBJPIM_01498 3e-159 holB 2.7.7.7 L DNA polymerase III
BEMBJPIM_01499 2.4e-53 yaaQ S Cyclic-di-AMP receptor
BEMBJPIM_01500 2.4e-113 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BEMBJPIM_01501 1.1e-34 S Protein of unknown function (DUF2508)
BEMBJPIM_01502 1.5e-106 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BEMBJPIM_01503 3.5e-52 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BEMBJPIM_01504 3.5e-287 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BEMBJPIM_01505 2.2e-90 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
BEMBJPIM_01506 7.2e-112 rsmC 2.1.1.172 J Methyltransferase
BEMBJPIM_01507 1.8e-90 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
BEMBJPIM_01508 9.1e-173
BEMBJPIM_01509 1.2e-45
BEMBJPIM_01510 1.9e-14 L Helix-turn-helix domain
BEMBJPIM_01511 4.6e-205 pbpX1 V Beta-lactamase
BEMBJPIM_01512 4.2e-214 pbpX1 V Beta-lactamase
BEMBJPIM_01513 1.6e-39 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
BEMBJPIM_01514 4.8e-24 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
BEMBJPIM_01516 4.9e-42 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
BEMBJPIM_01517 1.6e-145 oppA E ABC transporter, substratebinding protein
BEMBJPIM_01518 1.4e-84 oppA E ABC transporter, substratebinding protein
BEMBJPIM_01519 1.8e-49 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
BEMBJPIM_01520 1.1e-81 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BEMBJPIM_01521 3e-138 L Putative transposase DNA-binding domain
BEMBJPIM_01522 6.3e-75 L Putative transposase DNA-binding domain
BEMBJPIM_01523 8.5e-69
BEMBJPIM_01524 1.6e-230 amtB P ammonium transporter
BEMBJPIM_01525 1.7e-190 S Glycosyl transferase family 2
BEMBJPIM_01526 2e-121 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
BEMBJPIM_01527 6.9e-69 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BEMBJPIM_01528 5.2e-101 nusG K Participates in transcription elongation, termination and antitermination
BEMBJPIM_01529 1.8e-23 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
BEMBJPIM_01530 1e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
BEMBJPIM_01531 8.4e-63 dxs 2.2.1.7 HI 1-deoxy-D-xylulose-5-phosphate synthase
BEMBJPIM_01532 8.3e-96 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BEMBJPIM_01533 1.8e-95 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BEMBJPIM_01534 2.1e-122 4.2.99.20 S Alpha/beta hydrolase family
BEMBJPIM_01535 1.8e-33
BEMBJPIM_01536 2.4e-101 yvrI K sigma factor activity
BEMBJPIM_01537 2.5e-138 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BEMBJPIM_01538 9.4e-77 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
BEMBJPIM_01539 1.1e-275 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
BEMBJPIM_01540 3.6e-105 F NUDIX domain
BEMBJPIM_01541 2.4e-161 K LysR substrate binding domain
BEMBJPIM_01542 1.6e-180 yeiH S Conserved hypothetical protein 698
BEMBJPIM_01543 1.3e-290 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BEMBJPIM_01544 1.9e-06
BEMBJPIM_01545 5.7e-121 skfE V ATPases associated with a variety of cellular activities
BEMBJPIM_01546 8.7e-60 yvoA_1 K Transcriptional regulator, GntR family
BEMBJPIM_01548 5.8e-52 oppA E ABC transporter, substratebinding protein
BEMBJPIM_01549 1.3e-213 oppA E ABC transporter, substratebinding protein
BEMBJPIM_01550 1.1e-92 3.6.1.13 L COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
BEMBJPIM_01551 3.7e-232 6.3.2.4 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
BEMBJPIM_01552 6.2e-39 EGP Transmembrane secretion effector
BEMBJPIM_01553 2.7e-213 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
BEMBJPIM_01554 3.4e-73 2.7.13.3 T diguanylate cyclase
BEMBJPIM_01555 5.6e-20 5.99.1.2 T diguanylate cyclase
BEMBJPIM_01556 1.4e-15 5.99.1.2 T diguanylate cyclase
BEMBJPIM_01557 1.5e-109 T EAL domain
BEMBJPIM_01558 4.8e-11 5.99.1.2 T diguanylate cyclase
BEMBJPIM_01559 1.3e-85 S ECF-type riboflavin transporter, S component
BEMBJPIM_01560 2.3e-262 adhE 1.1.1.1, 1.2.1.10 C Aldehyde dehydrogenase family
BEMBJPIM_01561 1.1e-139 cbiQ P cobalt transport
BEMBJPIM_01562 0.0 ykoD P ABC transporter, ATP-binding protein
BEMBJPIM_01563 1.3e-99 S UPF0397 protein
BEMBJPIM_01564 4.9e-159 salL 2.5.1.63, 2.5.1.94 K S-adenosyl-l-methionine hydroxide adenosyltransferase
BEMBJPIM_01565 3e-254 cycA E Amino acid permease
BEMBJPIM_01566 0.0 S ABC-type transport system involved in multi-copper enzyme maturation permease component
BEMBJPIM_01567 1.8e-167 ytrB V ABC transporter
BEMBJPIM_01568 1e-60 ytrA K helix_turn_helix gluconate operon transcriptional repressor
BEMBJPIM_01575 1.8e-74
BEMBJPIM_01576 1.8e-148 yliE T Putative diguanylate phosphodiesterase
BEMBJPIM_01577 1e-63 yliE T domain protein
BEMBJPIM_01578 9e-186 arbY M Glycosyl transferase family 8
BEMBJPIM_01579 6.6e-254 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BEMBJPIM_01580 3.4e-100 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
BEMBJPIM_01581 5.4e-49
BEMBJPIM_01582 3.3e-266 pepC 3.4.22.40 E Peptidase C1-like family
BEMBJPIM_01583 2.4e-183 S AAA domain
BEMBJPIM_01584 2.1e-79 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
BEMBJPIM_01585 8.3e-125 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BEMBJPIM_01586 5.2e-29
BEMBJPIM_01587 2.6e-28
BEMBJPIM_01588 4.7e-128 pgm3 G Belongs to the phosphoglycerate mutase family
BEMBJPIM_01589 5.9e-116 S membrane transporter protein
BEMBJPIM_01590 1e-107 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
BEMBJPIM_01591 3.4e-94 wecD K Acetyltransferase (GNAT) family
BEMBJPIM_01592 9.1e-195 ykfB 5.1.1.20 M Belongs to the mandelate racemase muconate lactonizing enzyme family
BEMBJPIM_01593 2.6e-08 3.5.2.6 V Beta-lactamase
BEMBJPIM_01594 6.8e-37 3.5.2.6 V Beta-lactamase
BEMBJPIM_01595 1.8e-136 ybbH_2 K Helix-turn-helix domain, rpiR family
BEMBJPIM_01596 1.4e-275 pepV 3.5.1.18 E dipeptidase PepV
BEMBJPIM_01597 1.7e-47 cycA E Amino acid permease
BEMBJPIM_01598 4.8e-166 cycA E Amino acid permease
BEMBJPIM_01599 1.8e-07 lacR K DeoR C terminal sensor domain
BEMBJPIM_01600 8e-252 aspA 4.2.1.2, 4.3.1.1 E Fumarase C C-terminus
BEMBJPIM_01601 1.3e-146 D nuclear chromosome segregation
BEMBJPIM_01602 1.3e-76 M LysM domain protein
BEMBJPIM_01606 7.2e-158 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
BEMBJPIM_01607 4.7e-282 thrC 4.2.3.1 E Threonine synthase
BEMBJPIM_01611 1e-98 K Acetyltransferase (GNAT) domain
BEMBJPIM_01612 1.5e-106 yiiE S Protein of unknown function (DUF1211)
BEMBJPIM_01613 7.7e-25
BEMBJPIM_01614 3.2e-138 scrR K Transcriptional regulator, LacI family
BEMBJPIM_01615 2.5e-110 scrB 3.2.1.26 GH32 G invertase
BEMBJPIM_01616 7e-55 scrB 3.2.1.26 GH32 G invertase
BEMBJPIM_01617 7.8e-79 2.7.1.199, 2.7.1.211 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BEMBJPIM_01618 1.9e-200 pfkA 2.7.1.11, 2.7.1.90 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
BEMBJPIM_01619 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
BEMBJPIM_01620 6.5e-127 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
BEMBJPIM_01621 6.2e-81 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
BEMBJPIM_01622 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
BEMBJPIM_01623 1e-276 E Amino acid permease
BEMBJPIM_01624 6.7e-53 L Transposase and inactivated derivatives, IS30 family
BEMBJPIM_01625 2.2e-205 G Major Facilitator Superfamily
BEMBJPIM_01626 2.9e-38 L COG2963 Transposase and inactivated derivatives
BEMBJPIM_01627 6.4e-208 G Major Facilitator Superfamily
BEMBJPIM_01628 5.3e-203 L COG2826 Transposase and inactivated derivatives, IS30 family
BEMBJPIM_01630 5e-47 malS 3.2.1.1 GH13 G Glycogen debranching enzyme, glucanotransferase domain
BEMBJPIM_01631 5.9e-137 malS 3.2.1.1 GH13 G Glycogen debranching enzyme, glucanotransferase domain
BEMBJPIM_01632 3.7e-21 malS 3.2.1.1 GH13 G Glycogen debranching enzyme, glucanotransferase domain
BEMBJPIM_01633 1.7e-221 oxlT P Major Facilitator Superfamily
BEMBJPIM_01635 1.3e-18 K sequence-specific DNA binding
BEMBJPIM_01636 2.4e-47
BEMBJPIM_01637 0.0 recQ1 L Helicase conserved C-terminal domain
BEMBJPIM_01638 2e-188 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
BEMBJPIM_01639 5.6e-08 K Helix-turn-helix domain
BEMBJPIM_01641 2.5e-163 3.5.2.6 M NlpC/P60 family
BEMBJPIM_01642 1.7e-246 cycA E Amino acid permease
BEMBJPIM_01644 8.1e-63 manO S Domain of unknown function (DUF956)
BEMBJPIM_01645 4.8e-168 manN G system, mannose fructose sorbose family IID component
BEMBJPIM_01646 5.4e-139 manY G PTS system
BEMBJPIM_01647 7.9e-188 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
BEMBJPIM_01648 5e-224 L DDE superfamily endonuclease
BEMBJPIM_01649 1.5e-225 L COG3547 Transposase and inactivated derivatives
BEMBJPIM_01651 1.5e-53 L Putative transposase DNA-binding domain
BEMBJPIM_01652 1.4e-243 nhaC C Na H antiporter NhaC
BEMBJPIM_01653 2.1e-26 S the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts
BEMBJPIM_01654 1.8e-74
BEMBJPIM_01656 4.3e-70 cydD V abc transporter atp-binding protein
BEMBJPIM_01657 1.4e-275 sufB O assembly protein SufB
BEMBJPIM_01658 4.3e-74 nifU C SUF system FeS assembly protein, NifU family
BEMBJPIM_01659 4.3e-225 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BEMBJPIM_01660 4e-220 sufD O FeS assembly protein SufD
BEMBJPIM_01661 2.7e-143 sufC O FeS assembly ATPase SufC
BEMBJPIM_01662 6e-91 yjcF S Acetyltransferase (GNAT) domain
BEMBJPIM_01663 1.8e-84 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BEMBJPIM_01664 6.2e-82
BEMBJPIM_01665 7e-21 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
BEMBJPIM_01667 4.9e-117 V ABC transporter, ATP-binding protein
BEMBJPIM_01668 1.9e-215 S FtsX-like permease family
BEMBJPIM_01671 8e-79 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
BEMBJPIM_01672 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
BEMBJPIM_01673 2.9e-29 secG U Preprotein translocase
BEMBJPIM_01674 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
BEMBJPIM_01675 3.3e-178 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BEMBJPIM_01676 2.2e-201 cpoA GT4 M Glycosyltransferase, group 1 family protein
BEMBJPIM_01677 1.6e-221 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
BEMBJPIM_01704 1.2e-82 E amino acid
BEMBJPIM_01705 2.9e-102 E Arginine ornithine antiporter
BEMBJPIM_01706 5.3e-47 E Arginine ornithine antiporter
BEMBJPIM_01707 3.5e-14 XK27_07210 6.1.1.6 S B3 4 domain
BEMBJPIM_01708 5.7e-136 S amidohydrolase
BEMBJPIM_01712 1.8e-74
BEMBJPIM_01713 9.2e-153 S Protein of unknown function (DUF3298)
BEMBJPIM_01714 2.7e-97 K Sigma-70 region 2
BEMBJPIM_01715 5.9e-236 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
BEMBJPIM_01716 6.1e-93 J Acetyltransferase (GNAT) domain
BEMBJPIM_01717 2.9e-105 yjbF S SNARE associated Golgi protein
BEMBJPIM_01718 1.1e-150 I alpha/beta hydrolase fold
BEMBJPIM_01719 1.4e-156 hipB K Helix-turn-helix
BEMBJPIM_01720 8.6e-95 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
BEMBJPIM_01721 1.7e-130 yfeJ 6.3.5.2 F glutamine amidotransferase
BEMBJPIM_01722 6.3e-148 L Transposase and inactivated derivatives, IS30 family
BEMBJPIM_01723 6.3e-175
BEMBJPIM_01724 0.0 ydgH S MMPL family
BEMBJPIM_01725 8.8e-99 yobS K Bacterial regulatory proteins, tetR family
BEMBJPIM_01726 5.5e-26
BEMBJPIM_01727 1e-157 3.5.2.6 V Beta-lactamase enzyme family
BEMBJPIM_01728 3.3e-153 corA P CorA-like Mg2+ transporter protein
BEMBJPIM_01729 4.6e-176 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
BEMBJPIM_01730 5.4e-86 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
BEMBJPIM_01731 4.4e-106
BEMBJPIM_01732 1e-41 E dipeptidase activity
BEMBJPIM_01733 3e-124 endA F DNA RNA non-specific endonuclease
BEMBJPIM_01734 1.6e-157 dkg S reductase
BEMBJPIM_01736 1.2e-35 GK ROK family
BEMBJPIM_01737 1.4e-38 GK ROK family
BEMBJPIM_01738 6e-09 S PAS domain
BEMBJPIM_01739 3.3e-289 V ABC transporter transmembrane region
BEMBJPIM_01740 1.8e-108 L COG2826 Transposase and inactivated derivatives, IS30 family
BEMBJPIM_01741 1.4e-14 L the current gene model (or a revised gene model) may contain a frame shift
BEMBJPIM_01742 1.2e-197
BEMBJPIM_01743 1.1e-180 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
BEMBJPIM_01744 1.6e-76 ymfM S Helix-turn-helix domain
BEMBJPIM_01745 7.1e-98 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BEMBJPIM_01746 1e-170 coaA 2.7.1.33 F Pantothenic acid kinase
BEMBJPIM_01747 5.7e-103 E GDSL-like Lipase/Acylhydrolase
BEMBJPIM_01748 4.4e-74 XK27_02470 K LytTr DNA-binding domain
BEMBJPIM_01749 1e-11 liaI S membrane
BEMBJPIM_01750 1.8e-84 aatB ET ABC transporter substrate-binding protein
BEMBJPIM_01751 5.5e-49 aatB ET ABC transporter substrate-binding protein
BEMBJPIM_01752 5e-41 glnQ 3.6.3.21 E ABC transporter
BEMBJPIM_01753 0.0 helD 3.6.4.12 L DNA helicase
BEMBJPIM_01754 7.6e-115 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
BEMBJPIM_01755 2e-123 pgm3 G Phosphoglycerate mutase family
BEMBJPIM_01756 3.4e-134 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
BEMBJPIM_01757 2.5e-39
BEMBJPIM_01759 0.0 3.1.4.46, 3.2.1.99 GH43 N domain, Protein
BEMBJPIM_01760 1.3e-10 sidC L DNA recombination
BEMBJPIM_01761 6.9e-84 sidC L DNA recombination
BEMBJPIM_01762 2.6e-58 sidC L DNA recombination
BEMBJPIM_01763 2.2e-128 S VanZ like family
BEMBJPIM_01764 2.7e-73 mesH S Teichoic acid glycosylation protein
BEMBJPIM_01765 9.2e-80 S VanZ like family
BEMBJPIM_01766 2.2e-09 M NlpC/P60 family
BEMBJPIM_01767 1e-87 M NlpC/P60 family
BEMBJPIM_01769 9.3e-120 G Peptidase_C39 like family
BEMBJPIM_01770 2.2e-196 S Acyltransferase family
BEMBJPIM_01771 1.2e-185 L COG2826 Transposase and inactivated derivatives, IS30 family
BEMBJPIM_01773 5.9e-225
BEMBJPIM_01774 2e-85 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
BEMBJPIM_01775 1.3e-178 M LicD family
BEMBJPIM_01776 3.6e-263 epsIIL S Membrane protein involved in the export of O-antigen and teichoic acid
BEMBJPIM_01777 5.1e-198 wbbI M transferase activity, transferring glycosyl groups
BEMBJPIM_01778 1.5e-184 M Glycosyl transferases group 1
BEMBJPIM_01779 2.4e-172 glfT1 1.1.1.133 S Glycosyltransferase like family 2
BEMBJPIM_01780 4.3e-219 glf 5.4.99.9 M UDP-galactopyranose mutase
BEMBJPIM_01781 7.7e-151 cps1D M Domain of unknown function (DUF4422)
BEMBJPIM_01782 1e-119 rfbP 2.7.8.6 M Bacterial sugar transferase
BEMBJPIM_01783 6.2e-81 S Core-2/I-Branching enzyme
BEMBJPIM_01784 1.9e-65 S Core-2/I-Branching enzyme
BEMBJPIM_01785 5.2e-175 brpA K Cell envelope-like function transcriptional attenuator common domain protein
BEMBJPIM_01787 2e-76 F DNA/RNA non-specific endonuclease
BEMBJPIM_01788 5.4e-14 L nuclease
BEMBJPIM_01789 3.3e-34
BEMBJPIM_01790 2.7e-58 K sequence-specific DNA binding
BEMBJPIM_01791 5e-182 gpsA 1.1.1.94 I Rossmann-like domain
BEMBJPIM_01792 8.6e-42 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BEMBJPIM_01793 1.4e-22 C Coenzyme F420-dependent N5N10-methylene tetrahydromethanopterin reductase
BEMBJPIM_01794 1e-10 N phage tail tape measure protein
BEMBJPIM_01795 3.2e-94 L the current gene model (or a revised gene model) may contain a frame shift
BEMBJPIM_01796 1.5e-29 L Transposase
BEMBJPIM_01797 4.9e-27
BEMBJPIM_01799 2.8e-153 XK27_00670 S ABC transporter
BEMBJPIM_01800 5.4e-96 S ABC transporter, ATP-binding protein
BEMBJPIM_01801 1.8e-77 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
BEMBJPIM_01802 8.5e-39 higA K Helix-turn-helix XRE-family like proteins
BEMBJPIM_01804 5.4e-197 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
BEMBJPIM_01805 2.7e-59 K Bacterial regulatory proteins, tetR family
BEMBJPIM_01806 4.8e-175 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
BEMBJPIM_01807 3.3e-11
BEMBJPIM_01808 3.8e-154 F DNA/RNA non-specific endonuclease
BEMBJPIM_01809 2e-96 L nuclease
BEMBJPIM_01810 7.4e-13 K Bacterial regulatory proteins, tetR family
BEMBJPIM_01811 8.2e-119 mcrC V McrBC 5-methylcytosine restriction system component
BEMBJPIM_01812 0.0 mcrB V AAA domain (dynein-related subfamily)
BEMBJPIM_01813 3.3e-39 L Transposase and inactivated derivatives
BEMBJPIM_01814 1.3e-102 L Transposase and inactivated derivatives
BEMBJPIM_01815 8.7e-201 GT4 M Glycosyl transferases group 1
BEMBJPIM_01816 6.3e-30 S Core-2/I-Branching enzyme
BEMBJPIM_01818 4.7e-35 gpsA 1.1.1.94 I Rossmann-like domain
BEMBJPIM_01819 1.8e-116 S Membrane protein involved in the export of O-antigen and teichoic acid
BEMBJPIM_01820 4.7e-70 L DDE superfamily endonuclease
BEMBJPIM_01821 1.1e-27 L DDE superfamily endonuclease
BEMBJPIM_01822 1.1e-41 L DDE superfamily endonuclease
BEMBJPIM_01823 1.4e-60 cps2I M Spore coat protein
BEMBJPIM_01824 3e-188 glf 5.4.99.9 M UDP-galactopyranose mutase
BEMBJPIM_01825 2e-17
BEMBJPIM_01826 1.8e-88 M Domain of unknown function (DUF4422)
BEMBJPIM_01827 1.2e-83 pssE S Glycosyltransferase family 28 C-terminal domain
BEMBJPIM_01828 5.2e-86 cpsF M Oligosaccharide biosynthesis protein Alg14 like
BEMBJPIM_01829 5.8e-123 rfbP M Bacterial sugar transferase
BEMBJPIM_01830 7.5e-146 ywqE 3.1.3.48 GM PHP domain protein
BEMBJPIM_01831 9.8e-114 ywqD 2.7.10.1 D Capsular exopolysaccharide family
BEMBJPIM_01832 2.2e-109 epsB M biosynthesis protein
BEMBJPIM_01833 1.2e-175 brpA K Cell envelope-like function transcriptional attenuator common domain protein
BEMBJPIM_01834 8.4e-125 pbpX1 V Beta-lactamase
BEMBJPIM_01835 3.6e-08 L An automated process has identified a potential problem with this gene model
BEMBJPIM_01836 4.9e-38 L An automated process has identified a potential problem with this gene model
BEMBJPIM_01837 4.9e-227 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BEMBJPIM_01838 3.7e-121 M NlpC P60 family protein
BEMBJPIM_01839 1.6e-103 M NlpC P60 family protein
BEMBJPIM_01840 8.1e-108 M NlpC P60 family protein
BEMBJPIM_01841 2.3e-81 M NlpC/P60 family
BEMBJPIM_01842 2.1e-199 ldhA 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BEMBJPIM_01843 5.6e-83 M NlpC P60 family
BEMBJPIM_01844 2.9e-96 gmk2 2.7.4.8 F Guanylate kinase homologues.
BEMBJPIM_01845 7.2e-45
BEMBJPIM_01846 9.8e-291 S O-antigen ligase like membrane protein
BEMBJPIM_01847 2.2e-111
BEMBJPIM_01848 3.1e-79
BEMBJPIM_01849 2.7e-85 S Threonine/Serine exporter, ThrE
BEMBJPIM_01850 2e-135 thrE S Putative threonine/serine exporter
BEMBJPIM_01851 9.5e-294 S ABC transporter, ATP-binding protein
BEMBJPIM_01852 7.9e-16
BEMBJPIM_01853 1.1e-206 brpA K Cell envelope-like function transcriptional attenuator common domain protein
BEMBJPIM_01854 2.2e-251 L Putative transposase DNA-binding domain
BEMBJPIM_01855 0.0 pepF E oligoendopeptidase F
BEMBJPIM_01856 2.9e-100 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
BEMBJPIM_01857 8.3e-49 KT response to antibiotic
BEMBJPIM_01858 8e-135 znuB U ABC 3 transport family
BEMBJPIM_01859 8.6e-119 fhuC P ABC transporter
BEMBJPIM_01860 5e-145 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
BEMBJPIM_01861 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
BEMBJPIM_01862 5.9e-166 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
BEMBJPIM_01863 2.8e-134 fruR K DeoR C terminal sensor domain
BEMBJPIM_01864 1.4e-144 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
BEMBJPIM_01865 6.4e-298 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BEMBJPIM_01866 6.5e-221 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
BEMBJPIM_01867 1e-122 K response regulator
BEMBJPIM_01868 0.0 ndvA V ABC transporter
BEMBJPIM_01869 0.0 V ABC transporter, ATP-binding protein
BEMBJPIM_01870 1.8e-136 XK27_01040 S Protein of unknown function (DUF1129)
BEMBJPIM_01871 6.1e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
BEMBJPIM_01872 2.5e-45 yyzM S Bacterial protein of unknown function (DUF951)
BEMBJPIM_01873 3.1e-156 spo0J K Belongs to the ParB family
BEMBJPIM_01874 2.6e-138 soj D Sporulation initiation inhibitor
BEMBJPIM_01875 6.7e-145 noc K Belongs to the ParB family
BEMBJPIM_01876 7.4e-132 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
BEMBJPIM_01877 3.2e-113 guaB2 L Resolvase, N terminal domain
BEMBJPIM_01878 1.8e-292 L Putative transposase DNA-binding domain
BEMBJPIM_01879 5.3e-87 cvpA S Colicin V production protein
BEMBJPIM_01880 2.2e-187 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
BEMBJPIM_01881 1e-142 3.1.3.48 T Tyrosine phosphatase family
BEMBJPIM_01882 1.9e-95 azr 1.5.1.36 S NADPH-dependent FMN reductase
BEMBJPIM_01883 3.8e-96 nqr 1.5.1.36 S NADPH-dependent FMN reductase
BEMBJPIM_01884 1.5e-97 K WHG domain
BEMBJPIM_01885 1.3e-276 pipD E Dipeptidase
BEMBJPIM_01886 1.1e-16
BEMBJPIM_01887 1.8e-116 V AAA domain, putative AbiEii toxin, Type IV TA system
BEMBJPIM_01888 8.8e-108
BEMBJPIM_01890 1.1e-139
BEMBJPIM_01891 1.3e-87 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BEMBJPIM_01892 5.9e-11 K LytTr DNA-binding domain
BEMBJPIM_01893 1.3e-66 S pyridoxamine 5-phosphate
BEMBJPIM_01894 8e-171 K WYL domain
BEMBJPIM_01895 4.4e-118 devA 3.6.3.25 V ABC transporter, ATP-binding protein
BEMBJPIM_01896 7.7e-186 hrtB V ABC transporter permease
BEMBJPIM_01897 2.1e-88 ygfC K transcriptional regulator (TetR family)
BEMBJPIM_01898 6.6e-67 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
BEMBJPIM_01899 9e-47 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
BEMBJPIM_01900 6.4e-139 S Belongs to the UPF0246 family
BEMBJPIM_01901 6e-117
BEMBJPIM_01902 1e-226 S Putative peptidoglycan binding domain
BEMBJPIM_01903 8.3e-08 1.13.11.79 C Nitroreductase family
BEMBJPIM_01904 2.5e-29 drgA C coenzyme F420-1:gamma-L-glutamate ligase activity
BEMBJPIM_01905 0.0 pepN 3.4.11.2 E aminopeptidase
BEMBJPIM_01906 7.1e-35 lysM M LysM domain
BEMBJPIM_01907 8.7e-173 citR K Putative sugar-binding domain
BEMBJPIM_01908 4.4e-255 pipD M Peptidase family C69
BEMBJPIM_01910 8.6e-257 P Sodium:sulfate symporter transmembrane region
BEMBJPIM_01911 7.9e-263 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
BEMBJPIM_01913 1.1e-151
BEMBJPIM_01914 1.1e-34
BEMBJPIM_01915 4.4e-91 ymdB S Macro domain protein
BEMBJPIM_01916 9.8e-146 ptp2 3.1.3.48 T Tyrosine phosphatase family
BEMBJPIM_01917 7.2e-289 V ABC-type multidrug transport system, ATPase and permease components
BEMBJPIM_01918 0.0 KLT serine threonine protein kinase
BEMBJPIM_01919 4e-144 ptp2 3.1.3.48 T Tyrosine phosphatase family
BEMBJPIM_01920 2.7e-143 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BEMBJPIM_01921 2.5e-27 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BEMBJPIM_01922 1.4e-129 cobQ S glutamine amidotransferase
BEMBJPIM_01923 8.6e-37
BEMBJPIM_01924 0.0 clpL O C-terminal, D2-small domain, of ClpB protein
BEMBJPIM_01925 7.9e-60 5.99.1.2 T diguanylate cyclase
BEMBJPIM_01926 4e-43 5.99.1.2 T diguanylate cyclase
BEMBJPIM_01927 2.1e-66 brnQ U Component of the transport system for branched-chain amino acids
BEMBJPIM_01928 9e-31 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
BEMBJPIM_01929 5.7e-49 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
BEMBJPIM_01930 5.3e-159 yicL EG EamA-like transporter family
BEMBJPIM_01931 7.7e-140 puuD S peptidase C26
BEMBJPIM_01932 4.4e-149 S Sucrose-6F-phosphate phosphohydrolase
BEMBJPIM_01933 2.1e-165 S Alpha/beta hydrolase of unknown function (DUF915)
BEMBJPIM_01934 9.7e-239 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BEMBJPIM_01937 1.8e-74
BEMBJPIM_01938 8.5e-116 K Bacterial regulatory proteins, tetR family
BEMBJPIM_01939 0.0 yhcA V ABC transporter, ATP-binding protein
BEMBJPIM_01940 3.8e-66 S Iron-sulphur cluster biosynthesis
BEMBJPIM_01941 7.3e-247 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BEMBJPIM_01942 2e-36 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BEMBJPIM_01943 1.3e-240 dltB M MBOAT, membrane-bound O-acyltransferase family
BEMBJPIM_01944 4.4e-296 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BEMBJPIM_01946 6.8e-53
BEMBJPIM_01947 1.1e-225 ywhK S Membrane
BEMBJPIM_01948 3.6e-08 L An automated process has identified a potential problem with this gene model
BEMBJPIM_01949 3.7e-66 L An automated process has identified a potential problem with this gene model
BEMBJPIM_01950 3.6e-85 ykuL S (CBS) domain
BEMBJPIM_01951 0.0 cadA P P-type ATPase
BEMBJPIM_01952 3.2e-201 napA P Sodium/hydrogen exchanger family
BEMBJPIM_01953 2.2e-122 S CAAX protease self-immunity
BEMBJPIM_01954 2.6e-200 S DUF218 domain
BEMBJPIM_01955 8.5e-196 tcsA S ABC transporter substrate-binding protein PnrA-like
BEMBJPIM_01957 4e-66 S Psort location Cytoplasmic, score
BEMBJPIM_01958 1.1e-187 KLT Protein tyrosine kinase
BEMBJPIM_01959 1e-70 S Domain of unknown function (DUF4352)
BEMBJPIM_01960 1.8e-190 tcsA S ABC transporter substrate-binding protein PnrA-like
BEMBJPIM_01961 2.5e-70 S SLAP domain
BEMBJPIM_01962 0.0 L Transposase DDE domain
BEMBJPIM_01963 5.5e-139 potB E Binding-protein-dependent transport system inner membrane component
BEMBJPIM_01964 3.9e-126 potC3 E Binding-protein-dependent transport system inner membrane component
BEMBJPIM_01965 1.9e-189 potA11 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
BEMBJPIM_01966 1.4e-187 potD2 P ABC transporter
BEMBJPIM_01967 5.9e-186 potD2 P ABC transporter
BEMBJPIM_01968 0.0 ade 3.5.4.2 F Adenine deaminase C-terminal domain
BEMBJPIM_01969 2.3e-193 tcsA S ABC transporter substrate-binding protein PnrA-like
BEMBJPIM_01970 2.1e-285 xylG 3.6.3.17 S ABC transporter
BEMBJPIM_01971 6.8e-204 yufP S Belongs to the binding-protein-dependent transport system permease family
BEMBJPIM_01972 3.7e-171 yufQ S Belongs to the binding-protein-dependent transport system permease family
BEMBJPIM_01973 2.2e-21 EGP Major facilitator Superfamily
BEMBJPIM_01975 2.4e-158 yeaE S Aldo/keto reductase family
BEMBJPIM_01976 1.3e-125 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
BEMBJPIM_01978 1.2e-13 L PFAM Integrase catalytic region
BEMBJPIM_01980 3.4e-166 3.2.1.17 M peptidoglycan-binding domain-containing protein
BEMBJPIM_01981 5.8e-39
BEMBJPIM_01982 5.8e-123 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
BEMBJPIM_01983 2.2e-128 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
BEMBJPIM_01984 3.8e-268 glnP P ABC transporter
BEMBJPIM_01985 5.5e-138 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
BEMBJPIM_01986 4.1e-229 pbuG S permease
BEMBJPIM_01987 9.5e-101 clcA P chloride
BEMBJPIM_01988 7.1e-173 clcA P chloride
BEMBJPIM_01989 5.1e-17 lmrA 3.6.3.44 V ABC transporter
BEMBJPIM_01990 2.3e-70
BEMBJPIM_01991 4.9e-91
BEMBJPIM_01992 5.8e-48
BEMBJPIM_01993 1.6e-268 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BEMBJPIM_01994 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
BEMBJPIM_01995 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
BEMBJPIM_01996 4e-251 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BEMBJPIM_01997 9.9e-147 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BEMBJPIM_01998 1.4e-62 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
BEMBJPIM_01999 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)