ORF_ID e_value Gene_name EC_number CAZy COGs Description
DOJOIFCL_00001 5.9e-45
DOJOIFCL_00002 3.7e-58 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
DOJOIFCL_00004 2.1e-45 S PFAM Archaeal ATPase
DOJOIFCL_00005 7.3e-74
DOJOIFCL_00006 0.0 kup P Transport of potassium into the cell
DOJOIFCL_00007 0.0 pepO 3.4.24.71 O Peptidase family M13
DOJOIFCL_00008 1.4e-210 yttB EGP Major facilitator Superfamily
DOJOIFCL_00009 1.5e-230 XK27_04775 S PAS domain
DOJOIFCL_00010 6.2e-103 S Iron-sulfur cluster assembly protein
DOJOIFCL_00011 8.7e-141 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DOJOIFCL_00012 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
DOJOIFCL_00013 5.6e-255 yxbA 6.3.1.12 S ATP-grasp enzyme
DOJOIFCL_00014 0.0 asnB 6.3.5.4 E Asparagine synthase
DOJOIFCL_00015 3.5e-271 S Calcineurin-like phosphoesterase
DOJOIFCL_00016 3.9e-84
DOJOIFCL_00017 1.6e-105 tag 3.2.2.20 L glycosylase
DOJOIFCL_00018 1.7e-174 L COG3385 FOG Transposase and inactivated derivatives
DOJOIFCL_00019 9.6e-184 L DDE superfamily endonuclease
DOJOIFCL_00020 1.1e-282 phoR 2.7.13.3 T Histidine kinase
DOJOIFCL_00021 1.6e-120 T Transcriptional regulatory protein, C terminal
DOJOIFCL_00022 5.3e-105 phoU P Plays a role in the regulation of phosphate uptake
DOJOIFCL_00023 1.3e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
DOJOIFCL_00024 1.2e-152 pstA P Phosphate transport system permease protein PstA
DOJOIFCL_00025 1.1e-159 pstC P probably responsible for the translocation of the substrate across the membrane
DOJOIFCL_00026 4.2e-145 pstS P Phosphate
DOJOIFCL_00027 1.3e-30
DOJOIFCL_00028 1.4e-191 oppA E ABC transporter, substratebinding protein
DOJOIFCL_00029 4.7e-275 ytgP S Polysaccharide biosynthesis protein
DOJOIFCL_00030 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
DOJOIFCL_00031 1.1e-121 3.6.1.27 I Acid phosphatase homologues
DOJOIFCL_00032 2.8e-168 K LysR substrate binding domain
DOJOIFCL_00033 2.3e-84 3.6.4.12 S PD-(D/E)XK nuclease family transposase
DOJOIFCL_00034 6.2e-43 1.3.5.4 C FAD binding domain
DOJOIFCL_00035 2.4e-231 ndh 1.6.99.3 C NADH dehydrogenase
DOJOIFCL_00036 1.1e-161 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
DOJOIFCL_00037 6.1e-177 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
DOJOIFCL_00038 2.2e-128 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
DOJOIFCL_00039 1.9e-269 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DOJOIFCL_00040 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
DOJOIFCL_00041 8.2e-177 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
DOJOIFCL_00042 6.4e-243 cydA 1.10.3.14 C ubiquinol oxidase
DOJOIFCL_00043 1.5e-234 L Transposase DDE domain
DOJOIFCL_00044 1.3e-235 G Bacterial extracellular solute-binding protein
DOJOIFCL_00045 7.7e-162 2.7.7.12 C Domain of unknown function (DUF4931)
DOJOIFCL_00046 3.5e-166 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DOJOIFCL_00047 1e-125 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
DOJOIFCL_00048 0.0 kup P Transport of potassium into the cell
DOJOIFCL_00049 9.1e-175 rihB 3.2.2.1 F Nucleoside
DOJOIFCL_00050 2.8e-134 ydhQ K UbiC transcription regulator-associated domain protein
DOJOIFCL_00051 1.2e-154 S hydrolase
DOJOIFCL_00052 2.5e-59 S Enterocin A Immunity
DOJOIFCL_00053 3.1e-136 glcR K DeoR C terminal sensor domain
DOJOIFCL_00054 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
DOJOIFCL_00055 2e-160 rssA S Phospholipase, patatin family
DOJOIFCL_00056 5.4e-147 S hydrolase
DOJOIFCL_00057 0.0 glvC 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
DOJOIFCL_00058 4.1e-147 glvR K Helix-turn-helix domain, rpiR family
DOJOIFCL_00059 1.6e-80
DOJOIFCL_00060 2.9e-87 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
DOJOIFCL_00061 2.1e-39
DOJOIFCL_00062 3.9e-119 C nitroreductase
DOJOIFCL_00063 1.7e-249 yhdP S Transporter associated domain
DOJOIFCL_00064 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
DOJOIFCL_00065 0.0 1.3.5.4 C FAD binding domain
DOJOIFCL_00066 7.4e-128 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
DOJOIFCL_00067 4.5e-192 I transferase activity, transferring acyl groups other than amino-acyl groups
DOJOIFCL_00068 5.6e-179 S PFAM Archaeal ATPase
DOJOIFCL_00069 6.3e-77 S cog cog1373
DOJOIFCL_00070 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DOJOIFCL_00071 3.5e-32 ykzG S Belongs to the UPF0356 family
DOJOIFCL_00072 1e-40
DOJOIFCL_00073 1.7e-147
DOJOIFCL_00074 1.5e-169
DOJOIFCL_00075 2e-263 glnA 6.3.1.2 E glutamine synthetase
DOJOIFCL_00076 2.3e-221 ynbB 4.4.1.1 P aluminum resistance
DOJOIFCL_00077 1e-168 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
DOJOIFCL_00078 1.5e-65 yqhL P Rhodanese-like protein
DOJOIFCL_00079 9.7e-36 yqgQ S Bacterial protein of unknown function (DUF910)
DOJOIFCL_00080 3.1e-119 gluP 3.4.21.105 S Rhomboid family
DOJOIFCL_00081 2.1e-97 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DOJOIFCL_00082 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
DOJOIFCL_00083 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
DOJOIFCL_00084 0.0 S membrane
DOJOIFCL_00085 5.2e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
DOJOIFCL_00086 1.3e-38 S RelB antitoxin
DOJOIFCL_00087 3.4e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
DOJOIFCL_00088 6.7e-44 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
DOJOIFCL_00089 6.7e-139 fhuC 3.6.3.34 HP abc transporter atp-binding protein
DOJOIFCL_00090 9.5e-148 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DOJOIFCL_00091 8.7e-159 isdE P Periplasmic binding protein
DOJOIFCL_00092 6.3e-123 M Iron Transport-associated domain
DOJOIFCL_00093 3e-09 isdH M Iron Transport-associated domain
DOJOIFCL_00094 8.4e-89
DOJOIFCL_00095 1.1e-112 S SLAP domain
DOJOIFCL_00096 1.2e-51 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
DOJOIFCL_00097 1e-18 L Psort location Cytoplasmic, score
DOJOIFCL_00098 4.6e-48 E Pfam:DUF955
DOJOIFCL_00100 3.5e-131 topA2 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
DOJOIFCL_00102 1.2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DOJOIFCL_00103 1.1e-292 recJ L Single-stranded-DNA-specific exonuclease RecJ
DOJOIFCL_00104 2.2e-102 recJ L Single-stranded-DNA-specific exonuclease RecJ
DOJOIFCL_00105 1.5e-102 srtA 3.4.22.70 M sortase family
DOJOIFCL_00106 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
DOJOIFCL_00107 2.2e-202 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
DOJOIFCL_00108 0.0 dnaK O Heat shock 70 kDa protein
DOJOIFCL_00109 8e-68 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
DOJOIFCL_00110 4.9e-193 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
DOJOIFCL_00111 3.2e-175 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
DOJOIFCL_00112 1.6e-155 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DOJOIFCL_00113 1.1e-59 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DOJOIFCL_00114 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
DOJOIFCL_00115 3.2e-47 rplGA J ribosomal protein
DOJOIFCL_00116 8.8e-47 ylxR K Protein of unknown function (DUF448)
DOJOIFCL_00117 1.4e-196 nusA K Participates in both transcription termination and antitermination
DOJOIFCL_00118 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
DOJOIFCL_00119 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DOJOIFCL_00120 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
DOJOIFCL_00121 5.7e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
DOJOIFCL_00122 8.4e-140 cdsA 2.7.7.41 I Belongs to the CDS family
DOJOIFCL_00123 5.4e-138 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DOJOIFCL_00124 5.3e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
DOJOIFCL_00125 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
DOJOIFCL_00126 3.1e-184 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
DOJOIFCL_00127 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
DOJOIFCL_00128 5.9e-191 yabB 2.1.1.223 L Methyltransferase small domain
DOJOIFCL_00129 7.8e-114 plsC 2.3.1.51 I Acyltransferase
DOJOIFCL_00130 1.9e-225 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
DOJOIFCL_00131 2.4e-21 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DOJOIFCL_00132 1.8e-71 S PAS domain
DOJOIFCL_00133 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
DOJOIFCL_00134 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
DOJOIFCL_00135 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
DOJOIFCL_00136 1.4e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
DOJOIFCL_00137 3e-209 msmX P Belongs to the ABC transporter superfamily
DOJOIFCL_00138 2.3e-213 malE G Bacterial extracellular solute-binding protein
DOJOIFCL_00139 1.1e-250 malF P Binding-protein-dependent transport system inner membrane component
DOJOIFCL_00140 3.3e-147 malG P ABC transporter permease
DOJOIFCL_00141 1.5e-59 K Helix-turn-helix XRE-family like proteins
DOJOIFCL_00144 1.6e-28
DOJOIFCL_00145 2.1e-131 cobQ S glutamine amidotransferase
DOJOIFCL_00146 1.8e-81 M NlpC/P60 family
DOJOIFCL_00149 6.4e-154
DOJOIFCL_00150 7.8e-38
DOJOIFCL_00151 2e-32
DOJOIFCL_00152 2.8e-163 EG EamA-like transporter family
DOJOIFCL_00153 5.9e-166 EG EamA-like transporter family
DOJOIFCL_00154 7.3e-83 yicL EG EamA-like transporter family
DOJOIFCL_00155 4.3e-107
DOJOIFCL_00156 1.1e-110
DOJOIFCL_00157 5.8e-186 XK27_05540 S DUF218 domain
DOJOIFCL_00158 9.3e-264 yheS_2 S ATPases associated with a variety of cellular activities
DOJOIFCL_00159 4.7e-85
DOJOIFCL_00160 3.9e-57
DOJOIFCL_00161 4.7e-25 S Protein conserved in bacteria
DOJOIFCL_00162 1.3e-54 S protein encoded in hypervariable junctions of pilus gene clusters
DOJOIFCL_00163 3.2e-101 3.6.1.27 I Acid phosphatase homologues
DOJOIFCL_00164 2.5e-147 yitS S Uncharacterised protein, DegV family COG1307
DOJOIFCL_00165 5.8e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
DOJOIFCL_00166 6.3e-33 S Domain of unknown function (DUF4767)
DOJOIFCL_00167 1.3e-172 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
DOJOIFCL_00168 1.1e-147 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
DOJOIFCL_00169 4.5e-39 veg S Biofilm formation stimulator VEG
DOJOIFCL_00170 3e-151 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
DOJOIFCL_00171 1e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DOJOIFCL_00172 1e-147 tatD L hydrolase, TatD family
DOJOIFCL_00173 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DOJOIFCL_00174 1e-307 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
DOJOIFCL_00175 1.5e-132 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
DOJOIFCL_00176 1e-102 S TPM domain
DOJOIFCL_00177 1.8e-89 comEB 3.5.4.12 F MafB19-like deaminase
DOJOIFCL_00178 1.1e-192 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
DOJOIFCL_00179 1.2e-111 E Belongs to the SOS response-associated peptidase family
DOJOIFCL_00181 7.9e-112
DOJOIFCL_00182 7.5e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
DOJOIFCL_00183 2.9e-67 hsp O Belongs to the small heat shock protein (HSP20) family
DOJOIFCL_00184 5.2e-256 pepC 3.4.22.40 E aminopeptidase
DOJOIFCL_00185 1.9e-175 oppF P Belongs to the ABC transporter superfamily
DOJOIFCL_00186 2.3e-198 oppD P Belongs to the ABC transporter superfamily
DOJOIFCL_00187 8.9e-187 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
DOJOIFCL_00188 1.1e-146 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
DOJOIFCL_00189 8.3e-210 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
DOJOIFCL_00190 1.7e-136 lysA2 M Glycosyl hydrolases family 25
DOJOIFCL_00191 2.3e-133 S Protein of unknown function (DUF975)
DOJOIFCL_00192 7.6e-177 pbpX2 V Beta-lactamase
DOJOIFCL_00193 1.5e-247 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DOJOIFCL_00194 1.7e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
DOJOIFCL_00195 1.9e-236 dltB M MBOAT, membrane-bound O-acyltransferase family
DOJOIFCL_00196 2.1e-285 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
DOJOIFCL_00197 1.2e-18 S D-Ala-teichoic acid biosynthesis protein
DOJOIFCL_00198 4.1e-44
DOJOIFCL_00199 1e-207 ywhK S Membrane
DOJOIFCL_00200 1.5e-80 ykuL S (CBS) domain
DOJOIFCL_00201 0.0 cadA P P-type ATPase
DOJOIFCL_00202 2.8e-205 napA P Sodium/hydrogen exchanger family
DOJOIFCL_00203 1.9e-47 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
DOJOIFCL_00204 2.3e-41 S YoeB-like toxin of bacterial type II toxin-antitoxin system
DOJOIFCL_00205 4.1e-276 V ABC transporter transmembrane region
DOJOIFCL_00206 2.6e-155 mutR K Helix-turn-helix XRE-family like proteins
DOJOIFCL_00207 5.4e-51
DOJOIFCL_00208 5.8e-156 EGP Major facilitator Superfamily
DOJOIFCL_00209 3e-111 ropB K Transcriptional regulator
DOJOIFCL_00210 2.7e-120 S CAAX protease self-immunity
DOJOIFCL_00211 1.6e-194 S DUF218 domain
DOJOIFCL_00212 0.0 macB_3 V ABC transporter, ATP-binding protein
DOJOIFCL_00213 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
DOJOIFCL_00214 2.8e-100 S ECF transporter, substrate-specific component
DOJOIFCL_00215 3.9e-201 tcsA S ABC transporter substrate-binding protein PnrA-like
DOJOIFCL_00216 6.9e-181 tcsA S ABC transporter substrate-binding protein PnrA-like
DOJOIFCL_00217 1.3e-282 xylG 3.6.3.17 S ABC transporter
DOJOIFCL_00218 1.9e-198 yufP S Belongs to the binding-protein-dependent transport system permease family
DOJOIFCL_00219 4.4e-172 yufQ S Belongs to the binding-protein-dependent transport system permease family
DOJOIFCL_00220 3.7e-159 yeaE S Aldo/keto reductase family
DOJOIFCL_00221 2.1e-134 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
DOJOIFCL_00222 8.5e-119 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
DOJOIFCL_00223 9.3e-124 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
DOJOIFCL_00224 9.4e-72
DOJOIFCL_00225 8.2e-140 cof S haloacid dehalogenase-like hydrolase
DOJOIFCL_00226 3.3e-183 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
DOJOIFCL_00227 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
DOJOIFCL_00228 1e-167 cvfB S S1 domain
DOJOIFCL_00229 2.9e-165 xerD D recombinase XerD
DOJOIFCL_00230 8.1e-54 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
DOJOIFCL_00231 7.6e-132 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
DOJOIFCL_00232 4.1e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
DOJOIFCL_00233 3.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
DOJOIFCL_00234 8.7e-114 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
DOJOIFCL_00235 2.7e-18 M Lysin motif
DOJOIFCL_00236 2.2e-114 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
DOJOIFCL_00237 5.5e-212 rpsA 1.17.7.4 J Ribosomal protein S1
DOJOIFCL_00238 1.9e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
DOJOIFCL_00239 2.3e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
DOJOIFCL_00240 1.4e-75 S Tetratricopeptide repeat protein
DOJOIFCL_00241 3.8e-99 S Tetratricopeptide repeat protein
DOJOIFCL_00242 1.3e-237 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DOJOIFCL_00247 1.8e-163
DOJOIFCL_00248 7.8e-26 K Acetyltransferase (GNAT) domain
DOJOIFCL_00250 0.0 ydgH S MMPL family
DOJOIFCL_00251 6.6e-99 yobS K Bacterial regulatory proteins, tetR family
DOJOIFCL_00252 3.3e-148 3.5.2.6 V Beta-lactamase enzyme family
DOJOIFCL_00253 1.8e-154 corA P CorA-like Mg2+ transporter protein
DOJOIFCL_00254 2.3e-240 G Bacterial extracellular solute-binding protein
DOJOIFCL_00255 9.2e-258 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
DOJOIFCL_00256 6.1e-146 gtsC P Binding-protein-dependent transport system inner membrane component
DOJOIFCL_00257 1.6e-157 gtsB P ABC-type sugar transport systems, permease components
DOJOIFCL_00258 1.9e-203 malK P ATPases associated with a variety of cellular activities
DOJOIFCL_00259 1.3e-281 pipD E Dipeptidase
DOJOIFCL_00260 1.9e-158 endA F DNA RNA non-specific endonuclease
DOJOIFCL_00261 8e-182 dnaQ 2.7.7.7 L EXOIII
DOJOIFCL_00262 9e-158 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
DOJOIFCL_00263 3e-116 yviA S Protein of unknown function (DUF421)
DOJOIFCL_00264 1.1e-56 S Protein of unknown function (DUF3290)
DOJOIFCL_00265 2.6e-26 S Domain of unknown function (DUF771)
DOJOIFCL_00266 9e-35 K Helix-turn-helix domain
DOJOIFCL_00267 8.8e-17 K Helix-turn-helix XRE-family like proteins
DOJOIFCL_00268 6.9e-30 K Helix-turn-helix XRE-family like proteins
DOJOIFCL_00269 9.4e-26 topA2 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
DOJOIFCL_00270 8.5e-133 cobB K SIR2 family
DOJOIFCL_00271 9.2e-92 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
DOJOIFCL_00272 1.3e-124 terC P Integral membrane protein TerC family
DOJOIFCL_00273 5.8e-64 yeaO S Protein of unknown function, DUF488
DOJOIFCL_00274 8.9e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
DOJOIFCL_00275 1.3e-290 glnP P ABC transporter permease
DOJOIFCL_00276 3.4e-135 glnQ E ABC transporter, ATP-binding protein
DOJOIFCL_00277 7.3e-148 S Protein of unknown function (DUF805)
DOJOIFCL_00278 6.4e-159 L HNH nucleases
DOJOIFCL_00279 1e-119 yfbR S HD containing hydrolase-like enzyme
DOJOIFCL_00280 4e-177 G Glycosyl hydrolases family 8
DOJOIFCL_00281 4.5e-189 ydaM M Glycosyl transferase
DOJOIFCL_00284 4.8e-10 S Single-strand binding protein family
DOJOIFCL_00289 6.4e-63 K Transcriptional regulator, MarR family
DOJOIFCL_00290 3.1e-148 XK27_09600 V ABC transporter, ATP-binding protein
DOJOIFCL_00291 8.2e-140 XK27_09600 V ABC transporter, ATP-binding protein
DOJOIFCL_00292 0.0 V ABC transporter transmembrane region
DOJOIFCL_00293 1.6e-100 S ABC-type cobalt transport system, permease component
DOJOIFCL_00294 1e-246 G MFS/sugar transport protein
DOJOIFCL_00295 9.8e-39 udk 2.7.1.48 F Zeta toxin
DOJOIFCL_00296 1.1e-45 udk 2.7.1.48 F Zeta toxin
DOJOIFCL_00297 4.8e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
DOJOIFCL_00298 1.2e-146 glnH ET ABC transporter substrate-binding protein
DOJOIFCL_00299 3.7e-90 gluC P ABC transporter permease
DOJOIFCL_00300 4.7e-109 glnP P ABC transporter permease
DOJOIFCL_00301 1.1e-164 S Protein of unknown function (DUF2974)
DOJOIFCL_00302 5.6e-86
DOJOIFCL_00303 6.3e-212 S Uncharacterized protein conserved in bacteria (DUF2325)
DOJOIFCL_00304 1.1e-34 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
DOJOIFCL_00305 1.3e-148 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
DOJOIFCL_00306 1.4e-120 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
DOJOIFCL_00307 3e-139 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
DOJOIFCL_00308 1.2e-161 phnD P Phosphonate ABC transporter
DOJOIFCL_00310 8.8e-84 uspA T universal stress protein
DOJOIFCL_00311 7.5e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
DOJOIFCL_00312 8.6e-87 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
DOJOIFCL_00313 3e-89 ntd 2.4.2.6 F Nucleoside
DOJOIFCL_00314 5.2e-08
DOJOIFCL_00315 8.7e-242 V N-6 DNA Methylase
DOJOIFCL_00317 2.3e-195 L Probable transposase
DOJOIFCL_00318 5.7e-85 L Resolvase, N terminal domain
DOJOIFCL_00320 4.9e-118 L Belongs to the 'phage' integrase family
DOJOIFCL_00322 2e-29 S O-antigen ligase like membrane protein
DOJOIFCL_00323 5.1e-82 glfT1 1.1.1.133 S Glycosyltransferase, group 2 family protein
DOJOIFCL_00324 1.3e-71 K Helix-turn-helix domain, rpiR family
DOJOIFCL_00325 4.1e-21 K Helix-turn-helix domain, rpiR family
DOJOIFCL_00326 4.9e-82 rarA L MgsA AAA+ ATPase C terminal
DOJOIFCL_00327 4.3e-226 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DOJOIFCL_00329 1.8e-104 3.2.2.20 K acetyltransferase
DOJOIFCL_00330 2.3e-93 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
DOJOIFCL_00331 1.5e-11 GT2,GT4 M family 8
DOJOIFCL_00332 7e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
DOJOIFCL_00333 1.8e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
DOJOIFCL_00334 8.7e-140 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
DOJOIFCL_00335 2e-75 S cog cog0433
DOJOIFCL_00336 1.9e-110 F DNA/RNA non-specific endonuclease
DOJOIFCL_00337 2.7e-34 S YSIRK type signal peptide
DOJOIFCL_00339 5.5e-53
DOJOIFCL_00340 1.8e-285 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
DOJOIFCL_00341 8e-79 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
DOJOIFCL_00342 4.3e-169 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
DOJOIFCL_00343 1e-198 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
DOJOIFCL_00344 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
DOJOIFCL_00345 0.0 FbpA K Fibronectin-binding protein
DOJOIFCL_00346 1.1e-66
DOJOIFCL_00347 1.3e-159 degV S EDD domain protein, DegV family
DOJOIFCL_00348 6.1e-269 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
DOJOIFCL_00349 1.2e-127 K LytTr DNA-binding domain
DOJOIFCL_00350 4.4e-138 2.7.13.3 T GHKL domain
DOJOIFCL_00351 1.2e-16
DOJOIFCL_00352 2.1e-255 S Archaea bacterial proteins of unknown function
DOJOIFCL_00353 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
DOJOIFCL_00354 1.1e-269 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
DOJOIFCL_00355 1e-24
DOJOIFCL_00356 9.5e-26
DOJOIFCL_00357 2.5e-33
DOJOIFCL_00358 1.4e-53 S Enterocin A Immunity
DOJOIFCL_00359 8e-145 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
DOJOIFCL_00360 5.5e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DOJOIFCL_00361 6.6e-207 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
DOJOIFCL_00362 9.6e-121 K response regulator
DOJOIFCL_00364 0.0 V ABC transporter
DOJOIFCL_00365 4.2e-144 V ABC transporter, ATP-binding protein
DOJOIFCL_00366 1.2e-145 V ABC transporter, ATP-binding protein
DOJOIFCL_00367 3.8e-137 XK27_01040 S Protein of unknown function (DUF1129)
DOJOIFCL_00368 3.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
DOJOIFCL_00369 9.6e-45 yyzM S Bacterial protein of unknown function (DUF951)
DOJOIFCL_00370 1.5e-153 spo0J K Belongs to the ParB family
DOJOIFCL_00371 3.4e-138 soj D Sporulation initiation inhibitor
DOJOIFCL_00372 5e-148 noc K Belongs to the ParB family
DOJOIFCL_00373 1.2e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
DOJOIFCL_00374 2.1e-28 S Peptidase propeptide and YPEB domain
DOJOIFCL_00375 2.4e-60 ypaA S Protein of unknown function (DUF1304)
DOJOIFCL_00376 2.3e-309 oppA3 E ABC transporter, substratebinding protein
DOJOIFCL_00377 9e-161 V ABC transporter transmembrane region
DOJOIFCL_00378 7e-68 V ABC transporter transmembrane region
DOJOIFCL_00379 3.8e-65 yybA 2.3.1.57 K Transcriptional regulator
DOJOIFCL_00380 4.7e-83 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
DOJOIFCL_00381 2.5e-72 S Peptidase propeptide and YPEB domain
DOJOIFCL_00382 3.4e-76 S Peptidase propeptide and YPEB domain
DOJOIFCL_00383 2e-186 T GHKL domain
DOJOIFCL_00384 3.1e-130 T Transcriptional regulatory protein, C terminal
DOJOIFCL_00385 2.1e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
DOJOIFCL_00386 2.9e-277 V ABC transporter transmembrane region
DOJOIFCL_00387 1.7e-213 1.3.5.4 C FAD binding domain
DOJOIFCL_00388 3.4e-126 1.3.5.4 C FAD binding domain
DOJOIFCL_00389 3.3e-261 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
DOJOIFCL_00390 7.6e-91 F Nucleoside 2-deoxyribosyltransferase
DOJOIFCL_00391 1e-30 S cog cog1373
DOJOIFCL_00392 1.4e-15 S cog cog1373
DOJOIFCL_00393 5.2e-156 hipB K Helix-turn-helix
DOJOIFCL_00394 2.7e-151 I alpha/beta hydrolase fold
DOJOIFCL_00395 1.4e-110 yjbF S SNARE associated Golgi protein
DOJOIFCL_00396 7.5e-100 J Acetyltransferase (GNAT) domain
DOJOIFCL_00397 1.3e-248 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
DOJOIFCL_00398 9.1e-10 UW LPXTG-motif cell wall anchor domain protein
DOJOIFCL_00399 3.3e-45 UW LPXTG-motif cell wall anchor domain protein
DOJOIFCL_00400 1.3e-161 UW LPXTG-motif cell wall anchor domain protein
DOJOIFCL_00401 2.1e-135 UW LPXTG-motif cell wall anchor domain protein
DOJOIFCL_00402 7.3e-126 S Alpha/beta hydrolase family
DOJOIFCL_00403 3.7e-156 epsV 2.7.8.12 S glycosyl transferase family 2
DOJOIFCL_00404 4.4e-140 ypuA S Protein of unknown function (DUF1002)
DOJOIFCL_00405 3e-147 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DOJOIFCL_00406 7.7e-182 S Alpha/beta hydrolase of unknown function (DUF915)
DOJOIFCL_00407 2.5e-283 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DOJOIFCL_00408 9.3e-86
DOJOIFCL_00409 3.8e-80 coaA 2.7.1.33 F Pantothenic acid kinase
DOJOIFCL_00410 3.2e-75 S ECF transporter, substrate-specific component
DOJOIFCL_00411 1.5e-54 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
DOJOIFCL_00412 3.7e-144 gltC_1 3.1.3.48 K LysR substrate binding domain
DOJOIFCL_00413 5.8e-151 2.8.3.1 I Coenzyme A transferase
DOJOIFCL_00414 1.6e-82 2.8.3.1 I Coenzyme A transferase
DOJOIFCL_00415 5.1e-106 fabK 1.3.1.9 S Nitronate monooxygenase
DOJOIFCL_00416 2.2e-142 S Belongs to the UPF0246 family
DOJOIFCL_00417 4.1e-141 aroD S Alpha/beta hydrolase family
DOJOIFCL_00418 3.5e-111 G phosphoglycerate mutase
DOJOIFCL_00419 3.2e-92 ygfC K Bacterial regulatory proteins, tetR family
DOJOIFCL_00420 3.3e-176 hrtB V ABC transporter permease
DOJOIFCL_00421 1.5e-102 devA 3.6.3.25 V ABC transporter, ATP-binding protein
DOJOIFCL_00422 1.3e-273 pipD E Dipeptidase
DOJOIFCL_00423 4.2e-14 srtA 3.4.22.70 M sortase family
DOJOIFCL_00425 5.3e-26 rsmC 2.1.1.172 J Methyltransferase
DOJOIFCL_00426 9e-26
DOJOIFCL_00427 2.2e-90 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
DOJOIFCL_00428 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DOJOIFCL_00429 5.7e-106 2.4.1.58 GT8 M family 8
DOJOIFCL_00430 1.2e-35 M lipopolysaccharide 3-alpha-galactosyltransferase activity
DOJOIFCL_00431 8.2e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
DOJOIFCL_00432 1.6e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
DOJOIFCL_00433 1.1e-34 S Protein of unknown function (DUF2508)
DOJOIFCL_00434 1.6e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DOJOIFCL_00435 8.9e-53 yaaQ S Cyclic-di-AMP receptor
DOJOIFCL_00436 1.5e-155 holB 2.7.7.7 L DNA polymerase III
DOJOIFCL_00437 1.8e-59 yabA L Involved in initiation control of chromosome replication
DOJOIFCL_00438 5.1e-156 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DOJOIFCL_00439 1.4e-130 fat 3.1.2.21 I Acyl-ACP thioesterase
DOJOIFCL_00440 2.2e-85 S ECF transporter, substrate-specific component
DOJOIFCL_00441 2.4e-133 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
DOJOIFCL_00442 7.4e-97 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
DOJOIFCL_00443 4.5e-194 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
DOJOIFCL_00446 3.4e-17 CO COG0526, thiol-disulfide isomerase and thioredoxins
DOJOIFCL_00449 1.2e-32 M Peptidase family M23
DOJOIFCL_00450 1.8e-159 trsE S COG0433 Predicted ATPase
DOJOIFCL_00451 1.4e-14
DOJOIFCL_00453 3.9e-32 I mechanosensitive ion channel activity
DOJOIFCL_00454 2.8e-78 U TraM recognition site of TraD and TraG
DOJOIFCL_00455 7.8e-78 2.5.1.74 H UbiA prenyltransferase family
DOJOIFCL_00456 1e-95
DOJOIFCL_00458 5.5e-30
DOJOIFCL_00459 4.3e-40 S Protein of unknown function (DUF2922)
DOJOIFCL_00460 5e-105 S SLAP domain
DOJOIFCL_00461 6.7e-19 3.6.4.12 S PD-(D/E)XK nuclease family transposase
DOJOIFCL_00462 4.3e-145 3.6.4.12 S PD-(D/E)XK nuclease family transposase
DOJOIFCL_00463 1.1e-25
DOJOIFCL_00464 1.2e-77 K DNA-templated transcription, initiation
DOJOIFCL_00465 5.3e-41
DOJOIFCL_00467 8.6e-134 S SLAP domain
DOJOIFCL_00469 5.4e-215 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
DOJOIFCL_00470 2.5e-179 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
DOJOIFCL_00471 0.0 yjbQ P TrkA C-terminal domain protein
DOJOIFCL_00472 1.7e-106 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
DOJOIFCL_00473 2.1e-161 S Oxidoreductase family, NAD-binding Rossmann fold
DOJOIFCL_00474 2.1e-130
DOJOIFCL_00475 2.1e-116
DOJOIFCL_00476 5e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DOJOIFCL_00477 1.4e-98 G Aldose 1-epimerase
DOJOIFCL_00478 2.7e-202 brpA K Cell envelope-like function transcriptional attenuator common domain protein
DOJOIFCL_00479 1.6e-111 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
DOJOIFCL_00480 0.0 XK27_08315 M Sulfatase
DOJOIFCL_00481 8.8e-58 S Peptidase propeptide and YPEB domain
DOJOIFCL_00482 1.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DOJOIFCL_00483 2.5e-169 coaA 2.7.1.33 F Pantothenic acid kinase
DOJOIFCL_00484 7.1e-98 E GDSL-like Lipase/Acylhydrolase
DOJOIFCL_00485 7.5e-74 yjcF S Acetyltransferase (GNAT) domain
DOJOIFCL_00486 1.6e-143 aatB ET ABC transporter substrate-binding protein
DOJOIFCL_00487 1e-105 glnQ 3.6.3.21 E ABC transporter
DOJOIFCL_00488 1.5e-107 glnP P ABC transporter permease
DOJOIFCL_00489 0.0 helD 3.6.4.12 L DNA helicase
DOJOIFCL_00490 5.6e-118 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
DOJOIFCL_00491 1.4e-126 pgm3 G Phosphoglycerate mutase family
DOJOIFCL_00492 2.6e-189 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DOJOIFCL_00493 5.9e-160 metQ2 P Belongs to the nlpA lipoprotein family
DOJOIFCL_00494 2.4e-175 F DNA/RNA non-specific endonuclease
DOJOIFCL_00495 0.0 aha1 P E1-E2 ATPase
DOJOIFCL_00496 1.5e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DOJOIFCL_00497 1.3e-179 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
DOJOIFCL_00498 1.2e-250 yifK E Amino acid permease
DOJOIFCL_00499 3.7e-263 V ABC-type multidrug transport system, ATPase and permease components
DOJOIFCL_00500 2.7e-57
DOJOIFCL_00501 6.6e-56
DOJOIFCL_00502 4e-08
DOJOIFCL_00503 3.3e-127 L PFAM transposase IS116 IS110 IS902
DOJOIFCL_00504 5.7e-18
DOJOIFCL_00505 1.5e-239 G Bacterial extracellular solute-binding protein
DOJOIFCL_00506 1e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
DOJOIFCL_00507 1.1e-236 XK27_01810 S Calcineurin-like phosphoesterase
DOJOIFCL_00509 0.0 S SLAP domain
DOJOIFCL_00510 0.0 hsdR 3.1.21.3 L DEAD/DEAH box helicase
DOJOIFCL_00511 1.2e-164 S AAA domain, putative AbiEii toxin, Type IV TA system
DOJOIFCL_00512 3.4e-42 S RloB-like protein
DOJOIFCL_00513 1.9e-259 hsdM 2.1.1.72 V type I restriction-modification system
DOJOIFCL_00514 5.7e-99 3.1.21.3 V Type I restriction modification DNA specificity domain
DOJOIFCL_00516 4e-35 S SNARE associated Golgi protein
DOJOIFCL_00517 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
DOJOIFCL_00518 6.4e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
DOJOIFCL_00519 3.8e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DOJOIFCL_00520 1.2e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
DOJOIFCL_00521 6.8e-110 yjbK S CYTH
DOJOIFCL_00522 4.6e-114 yjbH Q Thioredoxin
DOJOIFCL_00523 4e-13 coiA 3.6.4.12 S Competence protein
DOJOIFCL_00524 3.3e-132 coiA 3.6.4.12 S Competence protein
DOJOIFCL_00525 8.5e-139 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
DOJOIFCL_00526 3.9e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
DOJOIFCL_00528 0.0 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
DOJOIFCL_00529 8.2e-85 scrR K Periplasmic binding protein domain
DOJOIFCL_00530 2.8e-216 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DOJOIFCL_00531 4.8e-34 S reductase
DOJOIFCL_00532 4.4e-39 S reductase
DOJOIFCL_00533 2.7e-32 S reductase
DOJOIFCL_00534 1.3e-148 yxeH S hydrolase
DOJOIFCL_00535 6.8e-181 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DOJOIFCL_00536 1.1e-243 yfnA E Amino Acid
DOJOIFCL_00537 6.8e-110 dedA 3.1.3.1 S SNARE associated Golgi protein
DOJOIFCL_00538 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
DOJOIFCL_00539 1.7e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DOJOIFCL_00540 1.6e-290 I Acyltransferase
DOJOIFCL_00541 5.4e-175 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
DOJOIFCL_00542 5.1e-142 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
DOJOIFCL_00543 1.5e-34 yrvD S Lipopolysaccharide assembly protein A domain
DOJOIFCL_00544 1.3e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
DOJOIFCL_00545 2.6e-310 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
DOJOIFCL_00546 2.3e-23 S Protein of unknown function (DUF2929)
DOJOIFCL_00547 0.0 dnaE 2.7.7.7 L DNA polymerase
DOJOIFCL_00548 3.4e-79
DOJOIFCL_00549 1e-242 cpdA S Calcineurin-like phosphoesterase
DOJOIFCL_00550 3.6e-218 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
DOJOIFCL_00551 1.1e-68 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
DOJOIFCL_00552 1e-107 ypsA S Belongs to the UPF0398 family
DOJOIFCL_00553 1.3e-116 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
DOJOIFCL_00554 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
DOJOIFCL_00555 6.1e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DOJOIFCL_00556 1.3e-114 dnaD L DnaD domain protein
DOJOIFCL_00557 1.5e-260 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
DOJOIFCL_00558 9.2e-89 ypmB S Protein conserved in bacteria
DOJOIFCL_00559 9.6e-183 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
DOJOIFCL_00560 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
DOJOIFCL_00561 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
DOJOIFCL_00562 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
DOJOIFCL_00563 4.8e-136 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
DOJOIFCL_00564 1.4e-178 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
DOJOIFCL_00565 2.1e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
DOJOIFCL_00566 6.9e-184 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
DOJOIFCL_00567 1.3e-116 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
DOJOIFCL_00568 8.3e-265 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
DOJOIFCL_00569 9.7e-169
DOJOIFCL_00570 7.5e-143
DOJOIFCL_00571 3.9e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
DOJOIFCL_00572 1.4e-26
DOJOIFCL_00573 6.7e-145
DOJOIFCL_00574 5.1e-137
DOJOIFCL_00575 4.5e-141
DOJOIFCL_00576 9.6e-124 skfE V ATPases associated with a variety of cellular activities
DOJOIFCL_00577 1.4e-60 yvoA_1 K Transcriptional regulator, GntR family
DOJOIFCL_00578 1.7e-240 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
DOJOIFCL_00579 3.7e-113 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DOJOIFCL_00580 1.1e-23 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DOJOIFCL_00581 3.5e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
DOJOIFCL_00582 4.8e-81 mutT 3.6.1.55 F NUDIX domain
DOJOIFCL_00583 1.4e-127 S Peptidase family M23
DOJOIFCL_00584 9.9e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
DOJOIFCL_00585 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
DOJOIFCL_00586 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
DOJOIFCL_00587 4.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
DOJOIFCL_00588 2.2e-134 recO L Involved in DNA repair and RecF pathway recombination
DOJOIFCL_00589 2.1e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DOJOIFCL_00590 2.2e-93 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
DOJOIFCL_00591 1.1e-175 phoH T phosphate starvation-inducible protein PhoH
DOJOIFCL_00592 3.5e-71 yqeY S YqeY-like protein
DOJOIFCL_00593 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
DOJOIFCL_00594 1.2e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
DOJOIFCL_00595 1.5e-18 S CRISPR-associated protein (Cas_Csn2)
DOJOIFCL_00596 1.7e-30 pgm3 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
DOJOIFCL_00597 8.8e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
DOJOIFCL_00598 2.6e-280 thrC 4.2.3.1 E Threonine synthase
DOJOIFCL_00599 6.6e-221 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
DOJOIFCL_00600 2.8e-157 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
DOJOIFCL_00601 9.4e-118
DOJOIFCL_00602 4.6e-160 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
DOJOIFCL_00604 1.8e-104 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DOJOIFCL_00605 1.3e-116 S Peptidase family M23
DOJOIFCL_00606 3.1e-150 xerD L Phage integrase, N-terminal SAM-like domain
DOJOIFCL_00607 3e-66 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DOJOIFCL_00608 1e-63 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DOJOIFCL_00609 5e-13 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
DOJOIFCL_00610 1.4e-115 mmuP E amino acid
DOJOIFCL_00611 1.4e-272 pepV 3.5.1.18 E dipeptidase PepV
DOJOIFCL_00612 6.3e-93 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
DOJOIFCL_00613 1.7e-284 E Amino acid permease
DOJOIFCL_00614 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
DOJOIFCL_00615 2.3e-245 ynbB 4.4.1.1 P aluminum resistance
DOJOIFCL_00616 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
DOJOIFCL_00618 5.7e-43 2.4.1.33 V HlyD family secretion protein
DOJOIFCL_00619 9.5e-88 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
DOJOIFCL_00620 1.4e-83 K FR47-like protein
DOJOIFCL_00621 2e-42 fryA 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
DOJOIFCL_00622 5.3e-37 mngA 2.7.1.195, 2.7.1.202 G Psort location Cytoplasmic, score 9.98
DOJOIFCL_00623 1.4e-150 mngA 2.7.1.195, 2.7.1.202 U system, fructose-specific IIC component
DOJOIFCL_00624 3.7e-277 ybgG 3.2.1.170 GH38 G Glycosyl hydrolases family 38 N-terminal domain
DOJOIFCL_00625 1.4e-137 licR 2.7.1.200, 2.7.1.202 G Mga helix-turn-helix domain
DOJOIFCL_00626 0.0 mngB 3.2.1.170, 3.2.1.24 GH38 G Glycosyl hydrolases family 38 N-terminal domain
DOJOIFCL_00628 7.9e-49 S COG0790 FOG TPR repeat, SEL1 subfamily
DOJOIFCL_00629 7.2e-38 L Protein of unknown function (DUF3991)
DOJOIFCL_00630 1.9e-115 rdgB 3.6.1.66, 5.1.1.3 F Ham1 family
DOJOIFCL_00631 1.7e-160 scrR K Periplasmic binding protein domain
DOJOIFCL_00632 5.5e-36
DOJOIFCL_00633 8.7e-60 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
DOJOIFCL_00634 1e-54 celA1 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
DOJOIFCL_00635 6.4e-128 K UTRA domain
DOJOIFCL_00636 3.5e-290 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
DOJOIFCL_00637 2e-85 alkD L DNA alkylation repair enzyme
DOJOIFCL_00638 1.3e-176 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
DOJOIFCL_00639 1.5e-81
DOJOIFCL_00640 3.6e-39 C FMN_bind
DOJOIFCL_00641 6.1e-227 L COG3547 Transposase and inactivated derivatives
DOJOIFCL_00642 4e-57 K Helix-turn-helix domain
DOJOIFCL_00643 2.7e-111 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DOJOIFCL_00644 2.1e-171 ppaC 3.6.1.1 C inorganic pyrophosphatase
DOJOIFCL_00645 5.6e-183 K Transcriptional regulator
DOJOIFCL_00646 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
DOJOIFCL_00647 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
DOJOIFCL_00648 3.5e-109 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
DOJOIFCL_00649 0.0 snf 2.7.11.1 KL domain protein
DOJOIFCL_00650 2e-35
DOJOIFCL_00652 3.8e-104 pncA Q Isochorismatase family
DOJOIFCL_00653 4.9e-118
DOJOIFCL_00656 3.6e-63
DOJOIFCL_00657 1.4e-34
DOJOIFCL_00658 2.3e-07 V ABC-type multidrug transport system, ATPase and permease components
DOJOIFCL_00659 6.2e-288 P ABC transporter
DOJOIFCL_00660 4.3e-36
DOJOIFCL_00662 1.4e-124 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
DOJOIFCL_00663 2.5e-86 K GNAT family
DOJOIFCL_00664 2.7e-202 XK27_00915 C Luciferase-like monooxygenase
DOJOIFCL_00665 2.9e-122 rbtT P Major Facilitator Superfamily
DOJOIFCL_00666 4.2e-63 lmrB EGP Major facilitator Superfamily
DOJOIFCL_00667 1.4e-101 3.6.1.27 I Acid phosphatase homologues
DOJOIFCL_00668 1.1e-189 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
DOJOIFCL_00669 0.0 uvrA3 L excinuclease ABC, A subunit
DOJOIFCL_00671 3.6e-162 atl 3.2.1.96, 3.5.1.28 GH73 UW LPXTG-motif cell wall anchor domain protein
DOJOIFCL_00672 5.6e-36
DOJOIFCL_00673 3.3e-183 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DOJOIFCL_00674 8.4e-125 luxT K Bacterial regulatory proteins, tetR family
DOJOIFCL_00675 2.8e-135
DOJOIFCL_00676 1.3e-258 glnPH2 P ABC transporter permease
DOJOIFCL_00677 2.6e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
DOJOIFCL_00678 6.4e-224 S Cysteine-rich secretory protein family
DOJOIFCL_00679 1.2e-205 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
DOJOIFCL_00680 1.4e-112
DOJOIFCL_00681 2.2e-202 yibE S overlaps another CDS with the same product name
DOJOIFCL_00682 4.9e-129 yibF S overlaps another CDS with the same product name
DOJOIFCL_00683 8.7e-145 I alpha/beta hydrolase fold
DOJOIFCL_00684 0.0 G Belongs to the glycosyl hydrolase 31 family
DOJOIFCL_00685 4.1e-217 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
DOJOIFCL_00686 2.4e-10 L Psort location Cytoplasmic, score
DOJOIFCL_00687 3.1e-240 oppA E ABC transporter substrate-binding protein
DOJOIFCL_00688 6.9e-47 mdtG EGP Major facilitator Superfamily
DOJOIFCL_00689 1.7e-152 mdtG EGP Major facilitator Superfamily
DOJOIFCL_00690 1.3e-174
DOJOIFCL_00691 2.8e-47 lysM M LysM domain
DOJOIFCL_00692 0.0 pepN 3.4.11.2 E aminopeptidase
DOJOIFCL_00693 1.3e-250 dtpT U amino acid peptide transporter
DOJOIFCL_00694 1.2e-18 S Sugar efflux transporter for intercellular exchange
DOJOIFCL_00695 6.6e-70 XK27_02470 K LytTr DNA-binding domain
DOJOIFCL_00696 7.9e-92 liaI S membrane
DOJOIFCL_00697 4e-16
DOJOIFCL_00698 3.9e-186 S Putative peptidoglycan binding domain
DOJOIFCL_00699 1.9e-157 2.7.7.12 C Domain of unknown function (DUF4931)
DOJOIFCL_00700 9e-121
DOJOIFCL_00701 2e-58 S SNARE associated Golgi protein
DOJOIFCL_00702 9.4e-186 S Bacterial protein of unknown function (DUF871)
DOJOIFCL_00703 3.7e-130 ybbH_2 K rpiR family
DOJOIFCL_00704 7e-23 cydA 1.10.3.14 C ubiquinol oxidase
DOJOIFCL_00705 8.1e-126 S PAS domain
DOJOIFCL_00706 1.6e-11
DOJOIFCL_00707 1.1e-163 L An automated process has identified a potential problem with this gene model
DOJOIFCL_00708 2.2e-117 phoU P Plays a role in the regulation of phosphate uptake
DOJOIFCL_00709 3.9e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
DOJOIFCL_00710 5e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
DOJOIFCL_00711 1.5e-153 pstA P Phosphate transport system permease protein PstA
DOJOIFCL_00712 9e-267 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
DOJOIFCL_00713 1.9e-261 frdC 1.3.5.4 C FAD binding domain
DOJOIFCL_00714 3.1e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
DOJOIFCL_00715 3.5e-252 pepC 3.4.22.40 E Peptidase C1-like family
DOJOIFCL_00716 1.3e-133 hxlA 6.2.1.3 H Aldolase/RraA
DOJOIFCL_00717 5.7e-272 P Sodium:sulfate symporter transmembrane region
DOJOIFCL_00718 2.9e-69 S Iron-sulphur cluster biosynthesis
DOJOIFCL_00719 6.5e-113 yncA 2.3.1.79 S Maltose acetyltransferase
DOJOIFCL_00720 6.2e-59 psiE S Phosphate-starvation-inducible E
DOJOIFCL_00722 4.4e-135 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
DOJOIFCL_00723 4.3e-228 amtB P ammonium transporter
DOJOIFCL_00724 1.4e-60
DOJOIFCL_00725 0.0 lhr L DEAD DEAH box helicase
DOJOIFCL_00726 1.4e-245 P P-loop Domain of unknown function (DUF2791)
DOJOIFCL_00727 2.6e-138 S TerB-C domain
DOJOIFCL_00728 1.5e-19
DOJOIFCL_00729 2.5e-264 3.6.3.6 P Cation transporter/ATPase, N-terminus
DOJOIFCL_00730 4.4e-35 3.6.3.2, 3.6.3.6 P cation transport ATPase
DOJOIFCL_00731 7.8e-10 3.6.3.2, 3.6.3.6 P cation transport ATPase
DOJOIFCL_00732 0.0 L Plasmid pRiA4b ORF-3-like protein
DOJOIFCL_00733 1.4e-37 S Putative adhesin
DOJOIFCL_00734 3.7e-261 V ABC transporter transmembrane region
DOJOIFCL_00735 1.1e-139
DOJOIFCL_00736 3.7e-20
DOJOIFCL_00739 2.4e-36
DOJOIFCL_00740 4.9e-58 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
DOJOIFCL_00741 3.1e-49 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
DOJOIFCL_00742 0.0 copA 3.6.3.54 P P-type ATPase
DOJOIFCL_00743 8.2e-114 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
DOJOIFCL_00744 1e-104
DOJOIFCL_00745 3.7e-131 gmuR K UTRA
DOJOIFCL_00746 4.5e-301 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
DOJOIFCL_00747 3.5e-70 S Domain of unknown function (DUF3284)
DOJOIFCL_00748 2e-169 celD G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DOJOIFCL_00749 2e-08 M domain protein
DOJOIFCL_00753 2.5e-245 brnQ U Component of the transport system for branched-chain amino acids
DOJOIFCL_00754 2.8e-119 3.6.1.55 F NUDIX domain
DOJOIFCL_00755 3.1e-113 ltrA S Bacterial low temperature requirement A protein (LtrA)
DOJOIFCL_00756 4.4e-151 S Metal-independent alpha-mannosidase (GH125)
DOJOIFCL_00760 7.8e-140 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
DOJOIFCL_00761 7.5e-103 G Phosphoglycerate mutase family
DOJOIFCL_00762 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
DOJOIFCL_00763 3.5e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
DOJOIFCL_00764 8.4e-146 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
DOJOIFCL_00765 2.1e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
DOJOIFCL_00766 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
DOJOIFCL_00767 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
DOJOIFCL_00768 9.5e-31
DOJOIFCL_00769 6.2e-276 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
DOJOIFCL_00770 3.8e-115 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
DOJOIFCL_00771 7.2e-183 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
DOJOIFCL_00772 4.3e-52 K helix_turn_helix gluconate operon transcriptional repressor
DOJOIFCL_00773 4.1e-156 crtI 1.3.99.23, 5.2.1.13 Q HI0933-like protein
DOJOIFCL_00774 2.6e-65 C 2Fe-2S iron-sulfur cluster binding domain
DOJOIFCL_00775 9.9e-82 C Flavodoxin
DOJOIFCL_00776 2.4e-209 mdlB V ABC transporter
DOJOIFCL_00777 2.9e-94 mdlB V ABC transporter
DOJOIFCL_00778 0.0 mdlA V ABC transporter
DOJOIFCL_00779 1.9e-30 yneF S Uncharacterised protein family (UPF0154)
DOJOIFCL_00780 4.4e-37 ynzC S UPF0291 protein
DOJOIFCL_00781 9.7e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DOJOIFCL_00782 5.4e-141 E GDSL-like Lipase/Acylhydrolase family
DOJOIFCL_00783 4.1e-27 bcgIB 2.1.1.72, 3.1.21.3 V Type I restriction modification DNA specificity domain
DOJOIFCL_00784 1.9e-138 2.4.2.3 F Phosphorylase superfamily
DOJOIFCL_00785 9e-144 2.4.2.3 F Phosphorylase superfamily
DOJOIFCL_00786 3.6e-151 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
DOJOIFCL_00787 6.3e-201 pbpX V Beta-lactamase
DOJOIFCL_00788 4.9e-254 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DOJOIFCL_00789 1.1e-94 MA20_25245 K Acetyltransferase (GNAT) domain
DOJOIFCL_00790 3.3e-61 3.6.1.55 F NUDIX domain
DOJOIFCL_00791 1e-79 S AAA domain
DOJOIFCL_00792 2.9e-117 fbiB 6.3.2.12, 6.3.2.17, 6.3.2.31, 6.3.2.34 S F420-0:Gamma-glutamyl ligase
DOJOIFCL_00793 2e-106 S domain protein
DOJOIFCL_00794 2.5e-140 V ABC transporter
DOJOIFCL_00795 5.9e-68 S Protein of unknown function (DUF3021)
DOJOIFCL_00796 6e-86
DOJOIFCL_00797 1.5e-152
DOJOIFCL_00798 3e-24
DOJOIFCL_00799 4.2e-112 S Fic/DOC family
DOJOIFCL_00801 3.6e-48 E Pfam:DUF955
DOJOIFCL_00802 1.7e-23 relB L Addiction module antitoxin, RelB DinJ family
DOJOIFCL_00803 9.6e-18 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
DOJOIFCL_00805 1.4e-31 O OsmC-like protein
DOJOIFCL_00806 3.3e-37 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
DOJOIFCL_00807 3.7e-92 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
DOJOIFCL_00808 3e-130 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
DOJOIFCL_00809 1.1e-39 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
DOJOIFCL_00810 4e-40 S CRISPR-associated protein (Cas_Csn2)
DOJOIFCL_00811 5.8e-23 M domain protein
DOJOIFCL_00812 1.8e-173 L Bifunctional protein
DOJOIFCL_00813 4.5e-68 S Domain of unknown function (DUF1934)
DOJOIFCL_00814 1.8e-47 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
DOJOIFCL_00815 2.7e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
DOJOIFCL_00816 1.4e-245 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DOJOIFCL_00817 2.1e-80 K acetyltransferase
DOJOIFCL_00818 1.3e-47 adk 2.7.4.3 F AAA domain
DOJOIFCL_00819 4.4e-285 pipD E Dipeptidase
DOJOIFCL_00820 2.5e-152 msmR K AraC-like ligand binding domain
DOJOIFCL_00821 1.4e-226 pbuX F xanthine permease
DOJOIFCL_00822 3.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
DOJOIFCL_00823 2.4e-43 K Helix-turn-helix
DOJOIFCL_00824 7.8e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
DOJOIFCL_00826 4.9e-99 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
DOJOIFCL_00827 8.7e-117 3.2.1.18 GH33 M Rib/alpha-like repeat
DOJOIFCL_00828 2.3e-132 3.2.1.18 GH33 M Rib/alpha-like repeat
DOJOIFCL_00830 4.5e-76 yniG EGP Major facilitator Superfamily
DOJOIFCL_00831 4.9e-35
DOJOIFCL_00833 1.3e-42
DOJOIFCL_00834 1.9e-75 M LysM domain
DOJOIFCL_00836 1e-15 S Domain of Unknown Function with PDB structure (DUF3850)
DOJOIFCL_00837 3.7e-80 D VirC1 protein
DOJOIFCL_00838 2.6e-11 ssb L Single-strand binding protein family
DOJOIFCL_00840 5.8e-78 M LysM domain protein
DOJOIFCL_00841 2.8e-86 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DOJOIFCL_00842 4.1e-78 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DOJOIFCL_00843 1.5e-16 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DOJOIFCL_00844 6.2e-12
DOJOIFCL_00845 2.3e-172 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
DOJOIFCL_00846 2.3e-30
DOJOIFCL_00849 1.6e-35 S Bacterial toxin of type II toxin-antitoxin system, YafQ
DOJOIFCL_00850 5e-39 relB L RelB antitoxin
DOJOIFCL_00854 2.2e-25 K Helix-turn-helix domain
DOJOIFCL_00855 1.3e-20 XK27_07105 K Helix-turn-helix XRE-family like proteins
DOJOIFCL_00856 1e-30 K Helix-turn-helix domain
DOJOIFCL_00858 4.1e-09 S Arc-like DNA binding domain
DOJOIFCL_00860 4e-21 K Conserved phage C-terminus (Phg_2220_C)
DOJOIFCL_00861 1.5e-26 S Domain of unknown function (DUF771)
DOJOIFCL_00862 2.3e-43 ybhL S Belongs to the BI1 family
DOJOIFCL_00864 1.2e-210 S Bacterial protein of unknown function (DUF871)
DOJOIFCL_00865 1.1e-183 scrR K helix_turn _helix lactose operon repressor
DOJOIFCL_00866 1.8e-294 scrB 3.2.1.26 GH32 G invertase
DOJOIFCL_00867 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
DOJOIFCL_00868 2.3e-181 M CHAP domain
DOJOIFCL_00869 3.5e-75
DOJOIFCL_00870 1.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
DOJOIFCL_00871 5.9e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
DOJOIFCL_00872 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
DOJOIFCL_00873 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
DOJOIFCL_00874 1.7e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
DOJOIFCL_00875 1.5e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
DOJOIFCL_00876 9.6e-41 yajC U Preprotein translocase
DOJOIFCL_00877 9.6e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DOJOIFCL_00878 6.2e-210 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DOJOIFCL_00879 1.4e-181 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
DOJOIFCL_00880 2e-226 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
DOJOIFCL_00881 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DOJOIFCL_00882 2e-42 yrzL S Belongs to the UPF0297 family
DOJOIFCL_00883 6.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DOJOIFCL_00884 1.1e-50 yrzB S Belongs to the UPF0473 family
DOJOIFCL_00885 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
DOJOIFCL_00886 3.5e-54 trxA O Belongs to the thioredoxin family
DOJOIFCL_00887 9.7e-59 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
DOJOIFCL_00888 1.1e-71 yslB S Protein of unknown function (DUF2507)
DOJOIFCL_00889 6.6e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
DOJOIFCL_00890 1.1e-110 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
DOJOIFCL_00892 4.7e-25 S SLAP domain
DOJOIFCL_00893 4.7e-223 ulaA S PTS system sugar-specific permease component
DOJOIFCL_00894 4.1e-31 sgaB 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
DOJOIFCL_00895 2.8e-90 ulaD 4.1.1.85, 4.1.2.43 G Orotidine 5'-phosphate decarboxylase / HUMPS family
DOJOIFCL_00896 7.2e-129 ulaE 5.1.3.22 G Xylose isomerase-like TIM barrel
DOJOIFCL_00897 4.9e-123 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
DOJOIFCL_00898 5.2e-68 L haloacid dehalogenase-like hydrolase
DOJOIFCL_00899 1.6e-48 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
DOJOIFCL_00900 8.8e-29
DOJOIFCL_00903 1.1e-110 K Helix-turn-helix XRE-family like proteins
DOJOIFCL_00904 2.5e-75 K Helix-turn-helix domain
DOJOIFCL_00905 2.6e-275 V ABC-type multidrug transport system, ATPase and permease components
DOJOIFCL_00906 7.8e-52 V ABC-type multidrug transport system, ATPase and permease components
DOJOIFCL_00908 1.6e-60 clcA P chloride
DOJOIFCL_00909 4.7e-26 K FCD
DOJOIFCL_00910 6.5e-64 L RelB antitoxin
DOJOIFCL_00911 5.1e-11 S Domain of unknown function (DUF4767)
DOJOIFCL_00912 1.8e-73 C nitroreductase
DOJOIFCL_00913 7e-87 gtcA S Teichoic acid glycosylation protein
DOJOIFCL_00914 4.1e-80 fld C Flavodoxin
DOJOIFCL_00915 1.4e-163 map 3.4.11.18 E Methionine Aminopeptidase
DOJOIFCL_00916 3.6e-163 yihY S Belongs to the UPF0761 family
DOJOIFCL_00917 2.1e-168 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
DOJOIFCL_00918 2.5e-214 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
DOJOIFCL_00919 3.6e-215 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
DOJOIFCL_00920 2.8e-48 S Peptidase propeptide and YPEB domain
DOJOIFCL_00921 2.7e-152 mdtG EGP Major facilitator Superfamily
DOJOIFCL_00922 3.8e-139 pnuC H nicotinamide mononucleotide transporter
DOJOIFCL_00923 3.9e-113 L PFAM Integrase catalytic
DOJOIFCL_00924 2e-57 clcA P chloride
DOJOIFCL_00925 4.5e-94 rimL J Acetyltransferase (GNAT) domain
DOJOIFCL_00926 9.7e-231 potE E amino acid
DOJOIFCL_00927 6.8e-156 ypbG 2.7.1.2 GK ROK family
DOJOIFCL_00928 8.7e-86 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
DOJOIFCL_00929 3.2e-139 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DOJOIFCL_00931 9.7e-65 yagE E amino acid
DOJOIFCL_00932 8.4e-128 yagE E Amino acid permease
DOJOIFCL_00933 4.3e-86 3.4.21.96 S SLAP domain
DOJOIFCL_00934 4.6e-160 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
DOJOIFCL_00935 1.1e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
DOJOIFCL_00936 1.2e-107 hlyIII S protein, hemolysin III
DOJOIFCL_00937 2e-144 DegV S Uncharacterised protein, DegV family COG1307
DOJOIFCL_00938 7.1e-36 yozE S Belongs to the UPF0346 family
DOJOIFCL_00939 1.1e-66 yjcE P NhaP-type Na H and K H
DOJOIFCL_00940 1.5e-40 yjcE P Sodium proton antiporter
DOJOIFCL_00941 1.9e-94 yjcE P Sodium proton antiporter
DOJOIFCL_00942 2.8e-154 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DOJOIFCL_00943 4.6e-132 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DOJOIFCL_00944 5.8e-152 dprA LU DNA protecting protein DprA
DOJOIFCL_00945 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DOJOIFCL_00946 1.4e-248 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
DOJOIFCL_00947 5e-141 xerC D Phage integrase, N-terminal SAM-like domain
DOJOIFCL_00948 1.9e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
DOJOIFCL_00949 8.2e-236 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
DOJOIFCL_00950 4.8e-181 lacX 5.1.3.3 G Aldose 1-epimerase
DOJOIFCL_00951 2.3e-17 C Aldo keto reductase
DOJOIFCL_00952 2.8e-63 C Aldo keto reductase
DOJOIFCL_00953 3.8e-48 M LysM domain protein
DOJOIFCL_00954 2.9e-15 M LysM domain protein
DOJOIFCL_00955 1.4e-98 L Helix-turn-helix domain
DOJOIFCL_00956 0.0 pepO 3.4.24.71 O Peptidase family M13
DOJOIFCL_00957 4.6e-88 ymdB S Macro domain protein
DOJOIFCL_00959 2.4e-21 S SLAP domain
DOJOIFCL_00960 1.2e-39 C 2Fe-2S iron-sulfur cluster binding domain
DOJOIFCL_00961 3.7e-204 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
DOJOIFCL_00962 2.9e-79 K LytTr DNA-binding domain
DOJOIFCL_00963 2.1e-78 2.7.13.3 T GHKL domain
DOJOIFCL_00964 4.7e-117 L Putative transposase DNA-binding domain
DOJOIFCL_00965 1e-20 S Enterocin A Immunity
DOJOIFCL_00966 1.8e-79
DOJOIFCL_00967 3.1e-71 2.5.1.74 H UbiA prenyltransferase family
DOJOIFCL_00968 7.7e-26
DOJOIFCL_00969 5.7e-84 S PFAM Archaeal ATPase
DOJOIFCL_00970 2.2e-85 S PFAM Archaeal ATPase
DOJOIFCL_00971 1e-23 M Glycosyltransferase, group 1 family
DOJOIFCL_00972 1.4e-109 yniG EGP Major facilitator Superfamily
DOJOIFCL_00973 6.9e-72
DOJOIFCL_00974 6.1e-63 S SIR2-like domain
DOJOIFCL_00975 2e-19
DOJOIFCL_00976 1.7e-184 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
DOJOIFCL_00977 3.2e-119 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
DOJOIFCL_00978 5.5e-44 3.6.4.12 S PD-(D/E)XK nuclease family transposase
DOJOIFCL_00979 2.1e-65 2.4.1.83 GT2 S GtrA-like protein
DOJOIFCL_00980 5.2e-170 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
DOJOIFCL_00981 1.5e-94 S Protein of unknown function (DUF3990)
DOJOIFCL_00982 6.5e-44
DOJOIFCL_00984 0.0 3.6.3.8 P P-type ATPase
DOJOIFCL_00985 1.1e-132 S AAA domain, putative AbiEii toxin, Type IV TA system
DOJOIFCL_00986 2.5e-52
DOJOIFCL_00987 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
DOJOIFCL_00988 1.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
DOJOIFCL_00989 5.7e-126 S Haloacid dehalogenase-like hydrolase
DOJOIFCL_00990 2.3e-108 radC L DNA repair protein
DOJOIFCL_00991 2.4e-176 mreB D cell shape determining protein MreB
DOJOIFCL_00992 2e-147 mreC M Involved in formation and maintenance of cell shape
DOJOIFCL_00993 2.7e-94 mreD
DOJOIFCL_00995 6.4e-54 S Protein of unknown function (DUF3397)
DOJOIFCL_00996 5.3e-17 yoaK S Protein of unknown function (DUF1275)
DOJOIFCL_00997 6.4e-88 yoaK S Protein of unknown function (DUF1275)
DOJOIFCL_00998 4.2e-35 topA2 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
DOJOIFCL_01004 6.8e-59 manA 5.3.1.8 G mannose-6-phosphate isomerase
DOJOIFCL_01005 8.5e-87 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DOJOIFCL_01006 2.5e-08 S Protein of unknown function (DUF3021)
DOJOIFCL_01009 8.9e-133 L Phage integrase family
DOJOIFCL_01010 5.1e-66 rpsI J Belongs to the universal ribosomal protein uS9 family
DOJOIFCL_01011 5.9e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
DOJOIFCL_01012 8.4e-145 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
DOJOIFCL_01013 7.2e-136 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DOJOIFCL_01014 4.6e-157 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DOJOIFCL_01015 3.7e-154 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DOJOIFCL_01016 1.4e-60 rplQ J Ribosomal protein L17
DOJOIFCL_01017 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DOJOIFCL_01018 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
DOJOIFCL_01019 5.2e-54 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
DOJOIFCL_01020 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
DOJOIFCL_01021 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
DOJOIFCL_01022 3.5e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
DOJOIFCL_01023 1.1e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
DOJOIFCL_01024 2.6e-71 rplO J Binds to the 23S rRNA
DOJOIFCL_01025 2.3e-24 rpmD J Ribosomal protein L30
DOJOIFCL_01026 4.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
DOJOIFCL_01027 1.1e-54 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
DOJOIFCL_01028 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DOJOIFCL_01029 3.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
DOJOIFCL_01030 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DOJOIFCL_01031 5.5e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
DOJOIFCL_01032 3.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
DOJOIFCL_01033 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DOJOIFCL_01034 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
DOJOIFCL_01035 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
DOJOIFCL_01036 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DOJOIFCL_01037 2.7e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
DOJOIFCL_01038 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
DOJOIFCL_01039 1.1e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DOJOIFCL_01040 7.3e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
DOJOIFCL_01041 3.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
DOJOIFCL_01042 4.6e-106 rplD J Forms part of the polypeptide exit tunnel
DOJOIFCL_01043 9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
DOJOIFCL_01044 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
DOJOIFCL_01045 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DOJOIFCL_01046 2.7e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
DOJOIFCL_01047 7.8e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
DOJOIFCL_01048 3.6e-120 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
DOJOIFCL_01049 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DOJOIFCL_01050 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DOJOIFCL_01051 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
DOJOIFCL_01052 1.3e-81 yebR 1.8.4.14 T GAF domain-containing protein
DOJOIFCL_01054 1.6e-08
DOJOIFCL_01055 5.4e-13
DOJOIFCL_01059 9.4e-46
DOJOIFCL_01060 2.5e-40 relB L Addiction module antitoxin, RelB DinJ family
DOJOIFCL_01061 3.1e-16 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
DOJOIFCL_01062 4.8e-228 L COG2963 Transposase and inactivated derivatives
DOJOIFCL_01064 2.9e-12
DOJOIFCL_01065 2e-18 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
DOJOIFCL_01066 2.5e-89 M Protein of unknown function (DUF3737)
DOJOIFCL_01067 2.6e-160 patB 4.4.1.8 E Aminotransferase, class I
DOJOIFCL_01068 1.3e-44 patB 4.4.1.8 E Aminotransferase, class I
DOJOIFCL_01069 7.2e-191 manA 5.3.1.8 G mannose-6-phosphate isomerase
DOJOIFCL_01070 7.7e-67 S SdpI/YhfL protein family
DOJOIFCL_01071 4.4e-129 K Transcriptional regulatory protein, C terminal
DOJOIFCL_01072 7.2e-267 yclK 2.7.13.3, 4.6.1.1 T Histidine kinase
DOJOIFCL_01073 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
DOJOIFCL_01074 3.8e-105 vanZ V VanZ like family
DOJOIFCL_01075 3.2e-253 pgi 5.3.1.9 G Belongs to the GPI family
DOJOIFCL_01076 3.8e-217 EGP Major facilitator Superfamily
DOJOIFCL_01077 3.9e-195 ampC V Beta-lactamase
DOJOIFCL_01080 1.7e-262 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
DOJOIFCL_01081 1.3e-113 tdk 2.7.1.21 F thymidine kinase
DOJOIFCL_01082 3.1e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DOJOIFCL_01083 7.3e-155 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
DOJOIFCL_01084 3.7e-190 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
DOJOIFCL_01085 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
DOJOIFCL_01086 3.8e-128 atpB C it plays a direct role in the translocation of protons across the membrane
DOJOIFCL_01087 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DOJOIFCL_01088 3.4e-46 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
DOJOIFCL_01089 2.8e-91 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DOJOIFCL_01090 2.8e-282 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
DOJOIFCL_01091 2e-172 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
DOJOIFCL_01092 3.3e-240 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
DOJOIFCL_01093 9e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
DOJOIFCL_01094 2e-30 ywzB S Protein of unknown function (DUF1146)
DOJOIFCL_01095 1.2e-177 mbl D Cell shape determining protein MreB Mrl
DOJOIFCL_01096 1e-50 yidD S Could be involved in insertion of integral membrane proteins into the membrane
DOJOIFCL_01097 3.3e-33 S Protein of unknown function (DUF2969)
DOJOIFCL_01098 4.7e-216 rodA D Belongs to the SEDS family
DOJOIFCL_01099 1.8e-78 usp6 T universal stress protein
DOJOIFCL_01100 8.4e-39
DOJOIFCL_01101 2.2e-238 rarA L recombination factor protein RarA
DOJOIFCL_01102 1.3e-84 yueI S Protein of unknown function (DUF1694)
DOJOIFCL_01103 1.4e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DOJOIFCL_01104 2.1e-294 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
DOJOIFCL_01105 7.4e-214 iscS2 2.8.1.7 E Aminotransferase class V
DOJOIFCL_01106 2e-225 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DOJOIFCL_01109 2.7e-34
DOJOIFCL_01110 1.2e-128 S interspecies interaction between organisms
DOJOIFCL_01112 9.1e-10 K peptidyl-tyrosine sulfation
DOJOIFCL_01113 7.1e-263 E ABC transporter, substratebinding protein
DOJOIFCL_01114 3.7e-66 K Helix-turn-helix domain, rpiR family
DOJOIFCL_01115 2.9e-122 nanA 4.1.3.3, 4.3.3.7 EM Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
DOJOIFCL_01116 8.4e-90 nanK GK ROK family
DOJOIFCL_01117 2.3e-56 G Xylose isomerase domain protein TIM barrel
DOJOIFCL_01118 1.9e-121 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
DOJOIFCL_01119 1e-220 nanT E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DOJOIFCL_01120 1.1e-59 axe1 3.1.1.41 Q Acetyl xylan esterase (AXE1)
DOJOIFCL_01121 1.7e-36 axe1 3.1.1.41 Q Acetyl xylan esterase (AXE1)
DOJOIFCL_01122 5.4e-25 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
DOJOIFCL_01123 2.5e-75 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
DOJOIFCL_01124 7.7e-10 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
DOJOIFCL_01125 3.6e-88 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
DOJOIFCL_01126 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DOJOIFCL_01127 2.1e-168 dnaI L Primosomal protein DnaI
DOJOIFCL_01128 5.1e-251 dnaB L Replication initiation and membrane attachment
DOJOIFCL_01129 3.5e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DOJOIFCL_01130 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DOJOIFCL_01131 4.2e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
DOJOIFCL_01132 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DOJOIFCL_01133 3.5e-25 qmcA O prohibitin homologues
DOJOIFCL_01134 7.4e-105 qmcA O prohibitin homologues
DOJOIFCL_01135 8e-51 L RelB antitoxin
DOJOIFCL_01136 4.5e-188 S Bacteriocin helveticin-J
DOJOIFCL_01137 4.4e-283 M Peptidase family M1 domain
DOJOIFCL_01138 1.8e-176 S SLAP domain
DOJOIFCL_01139 6.9e-218 mepA V MATE efflux family protein
DOJOIFCL_01140 9.7e-247 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
DOJOIFCL_01141 1.4e-122 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
DOJOIFCL_01142 2.8e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
DOJOIFCL_01144 3.3e-126 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
DOJOIFCL_01145 6.5e-221 ecsB U ABC transporter
DOJOIFCL_01146 5.7e-135 ecsA V ABC transporter, ATP-binding protein
DOJOIFCL_01147 8.3e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
DOJOIFCL_01148 3.9e-25
DOJOIFCL_01149 4.3e-153 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
DOJOIFCL_01150 1.9e-72 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
DOJOIFCL_01151 1.1e-265
DOJOIFCL_01152 2.4e-51 S Domain of unknown function DUF1829
DOJOIFCL_01153 2.9e-23
DOJOIFCL_01154 1.9e-186 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
DOJOIFCL_01155 0.0 L AAA domain
DOJOIFCL_01156 1e-226 yhaO L Ser Thr phosphatase family protein
DOJOIFCL_01157 7.2e-56 yheA S Belongs to the UPF0342 family
DOJOIFCL_01158 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
DOJOIFCL_01159 4.2e-150 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
DOJOIFCL_01160 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
DOJOIFCL_01161 1.6e-77 ybhL S Belongs to the BI1 family
DOJOIFCL_01162 4.3e-24 S SLAP domain
DOJOIFCL_01163 7.6e-25 S SLAP domain
DOJOIFCL_01165 9.2e-119 yhiD S MgtC family
DOJOIFCL_01166 4.7e-227 I Protein of unknown function (DUF2974)
DOJOIFCL_01167 1.4e-16
DOJOIFCL_01169 6.7e-167 scrK 2.7.1.2, 2.7.1.4 GK ROK family
DOJOIFCL_01170 3.2e-135 V ABC transporter transmembrane region
DOJOIFCL_01171 3.7e-168 degV S DegV family
DOJOIFCL_01172 2.3e-165 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
DOJOIFCL_01173 6.7e-254 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
DOJOIFCL_01174 5.7e-69 rplI J Binds to the 23S rRNA
DOJOIFCL_01175 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
DOJOIFCL_01176 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DOJOIFCL_01177 2.7e-75 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
DOJOIFCL_01178 5.5e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
DOJOIFCL_01179 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DOJOIFCL_01180 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DOJOIFCL_01181 4e-209 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DOJOIFCL_01182 9.9e-35 yaaA S S4 domain protein YaaA
DOJOIFCL_01183 3.1e-185 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
DOJOIFCL_01184 9.5e-245 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
DOJOIFCL_01185 1.5e-102 GM NmrA-like family
DOJOIFCL_01186 1.9e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DOJOIFCL_01187 1.6e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
DOJOIFCL_01188 9.1e-167 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
DOJOIFCL_01189 7.2e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
DOJOIFCL_01190 1.6e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
DOJOIFCL_01191 8.8e-245 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
DOJOIFCL_01192 6.4e-212 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
DOJOIFCL_01193 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
DOJOIFCL_01194 3.7e-250 lctP C L-lactate permease
DOJOIFCL_01195 3.1e-148 glcU U sugar transport
DOJOIFCL_01196 7.1e-46
DOJOIFCL_01197 2.9e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
DOJOIFCL_01198 8.1e-175 ulaG S Beta-lactamase superfamily domain
DOJOIFCL_01199 1.5e-61 cmtB 2.7.1.194, 2.7.1.197, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
DOJOIFCL_01200 1.6e-73 marR K Transcriptional regulator, MarR family
DOJOIFCL_01201 1.3e-48 4.2.1.59 I 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DOJOIFCL_01202 1.1e-86 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DOJOIFCL_01203 2.9e-38 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DOJOIFCL_01204 2.1e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
DOJOIFCL_01205 1.7e-139 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
DOJOIFCL_01206 2.9e-107 IQ reductase
DOJOIFCL_01207 4e-210 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
DOJOIFCL_01208 2.2e-49 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
DOJOIFCL_01209 9.2e-61 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
DOJOIFCL_01210 9.6e-237 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
DOJOIFCL_01211 3.3e-139 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
DOJOIFCL_01212 1.1e-128 accA 2.1.3.15, 6.4.1.2 I alpha subunit
DOJOIFCL_01213 1.9e-122 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
DOJOIFCL_01214 3e-80 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
DOJOIFCL_01215 1.2e-191 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DOJOIFCL_01218 1.8e-158 xth 3.1.11.2 L exodeoxyribonuclease III
DOJOIFCL_01219 1.3e-273 E amino acid
DOJOIFCL_01220 0.0 L Helicase C-terminal domain protein
DOJOIFCL_01221 4.8e-205 pbpX1 V Beta-lactamase
DOJOIFCL_01222 5.1e-226 N Uncharacterized conserved protein (DUF2075)
DOJOIFCL_01223 1.4e-69 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
DOJOIFCL_01224 5.3e-80
DOJOIFCL_01225 2e-295 S SLAP domain
DOJOIFCL_01226 4.8e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DOJOIFCL_01227 1.6e-171 2.7.1.2 GK ROK family
DOJOIFCL_01228 6.6e-44
DOJOIFCL_01229 9.4e-269 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
DOJOIFCL_01230 9.7e-83 S An automated process has identified a potential problem with this gene model
DOJOIFCL_01231 1e-137 S Protein of unknown function (DUF3100)
DOJOIFCL_01232 2.7e-246 3.5.1.47 S Peptidase dimerisation domain
DOJOIFCL_01233 8.4e-229 Q Imidazolonepropionase and related amidohydrolases
DOJOIFCL_01234 0.0 oppA E ABC transporter
DOJOIFCL_01235 1.2e-151 S Sucrose-6F-phosphate phosphohydrolase
DOJOIFCL_01236 7.3e-175 EGP Sugar (and other) transporter
DOJOIFCL_01237 1.2e-18
DOJOIFCL_01238 8e-210
DOJOIFCL_01239 3.5e-136 S SLAP domain
DOJOIFCL_01240 1.3e-117 S SLAP domain
DOJOIFCL_01241 9.1e-106 S Bacteriocin helveticin-J
DOJOIFCL_01242 1.2e-44
DOJOIFCL_01243 3.7e-58 ps115 K Helix-turn-helix XRE-family like proteins
DOJOIFCL_01244 4e-32 E Zn peptidase
DOJOIFCL_01245 3.9e-287 clcA P chloride
DOJOIFCL_01246 3e-270 L Transposase DDE domain
DOJOIFCL_01247 6e-260 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
DOJOIFCL_01248 3.2e-181 ccpA K catabolite control protein A
DOJOIFCL_01249 7e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
DOJOIFCL_01250 1.3e-36
DOJOIFCL_01251 9.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
DOJOIFCL_01252 3.7e-146 ykuT M mechanosensitive ion channel
DOJOIFCL_01253 6.9e-100 V ATPases associated with a variety of cellular activities
DOJOIFCL_01254 1.7e-139
DOJOIFCL_01255 5.4e-113
DOJOIFCL_01256 9.7e-46 oppA E ABC transporter substrate-binding protein
DOJOIFCL_01257 6.9e-121 oppC P Binding-protein-dependent transport system inner membrane component
DOJOIFCL_01258 2.6e-172 oppB P ABC transporter permease
DOJOIFCL_01259 1.5e-170 oppF P Belongs to the ABC transporter superfamily
DOJOIFCL_01260 3.1e-192 oppD P Belongs to the ABC transporter superfamily
DOJOIFCL_01261 4.9e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
DOJOIFCL_01262 3.7e-182 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
DOJOIFCL_01263 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DOJOIFCL_01264 7.6e-305 yloV S DAK2 domain fusion protein YloV
DOJOIFCL_01265 1.5e-56 asp S Asp23 family, cell envelope-related function
DOJOIFCL_01266 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
DOJOIFCL_01267 1.4e-30
DOJOIFCL_01268 4.1e-124 thiN 2.7.6.2 H thiamine pyrophosphokinase
DOJOIFCL_01269 2.9e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
DOJOIFCL_01270 4.5e-163 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
DOJOIFCL_01271 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
DOJOIFCL_01272 1.1e-138 stp 3.1.3.16 T phosphatase
DOJOIFCL_01273 1.6e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DOJOIFCL_01274 5.7e-172 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DOJOIFCL_01275 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DOJOIFCL_01276 1.1e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
DOJOIFCL_01277 2.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
DOJOIFCL_01278 1.1e-77 6.3.3.2 S ASCH
DOJOIFCL_01279 2.6e-300 recN L May be involved in recombinational repair of damaged DNA
DOJOIFCL_01280 2.3e-153 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
DOJOIFCL_01281 1e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
DOJOIFCL_01282 3.7e-35 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DOJOIFCL_01283 2.9e-193 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DOJOIFCL_01284 6.7e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
DOJOIFCL_01285 1.1e-63 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DOJOIFCL_01286 3.4e-71 yqhY S Asp23 family, cell envelope-related function
DOJOIFCL_01287 4.9e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DOJOIFCL_01288 1e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
DOJOIFCL_01289 1.3e-47 rpmA J Belongs to the bacterial ribosomal protein bL27 family
DOJOIFCL_01290 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
DOJOIFCL_01291 3.7e-151 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
DOJOIFCL_01292 7.8e-255 S Uncharacterized protein conserved in bacteria (DUF2325)
DOJOIFCL_01294 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
DOJOIFCL_01295 4.3e-298 S Predicted membrane protein (DUF2207)
DOJOIFCL_01296 2.8e-157 cinI S Serine hydrolase (FSH1)
DOJOIFCL_01297 1e-205 M Glycosyl hydrolases family 25
DOJOIFCL_01299 8.5e-178 I Carboxylesterase family
DOJOIFCL_01300 1.5e-64 arsC 1.20.4.1 P Belongs to the ArsC family
DOJOIFCL_01301 2.5e-241 V ABC-type multidrug transport system, ATPase and permease components
DOJOIFCL_01302 1.7e-148 S haloacid dehalogenase-like hydrolase
DOJOIFCL_01303 7e-50
DOJOIFCL_01304 1.9e-37
DOJOIFCL_01305 1.2e-63 S Alpha beta hydrolase
DOJOIFCL_01306 1e-23 S Alpha beta hydrolase
DOJOIFCL_01307 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
DOJOIFCL_01308 7.5e-183 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
DOJOIFCL_01309 6.8e-116 dedA S SNARE-like domain protein
DOJOIFCL_01310 3.7e-100 S Protein of unknown function (DUF1461)
DOJOIFCL_01311 3.4e-143 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
DOJOIFCL_01312 2.1e-92 yutD S Protein of unknown function (DUF1027)
DOJOIFCL_01313 5.8e-274 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
DOJOIFCL_01314 5.6e-55
DOJOIFCL_01315 2.5e-33 pgm3 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
DOJOIFCL_01316 2.8e-157 pstS P Phosphate
DOJOIFCL_01317 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
DOJOIFCL_01318 1.2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
DOJOIFCL_01319 1.3e-99 nusG K Participates in transcription elongation, termination and antitermination
DOJOIFCL_01320 3.6e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
DOJOIFCL_01321 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DOJOIFCL_01322 8.4e-287 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
DOJOIFCL_01323 1.7e-34
DOJOIFCL_01324 1.2e-94 sigH K Belongs to the sigma-70 factor family
DOJOIFCL_01325 1.7e-139 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DOJOIFCL_01326 5.1e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
DOJOIFCL_01327 7.5e-277 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
DOJOIFCL_01328 1.6e-290 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DOJOIFCL_01329 2.7e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DOJOIFCL_01330 1.8e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
DOJOIFCL_01331 4.1e-52
DOJOIFCL_01332 4.3e-266 pepC 3.4.22.40 E Peptidase C1-like family
DOJOIFCL_01333 3.3e-44
DOJOIFCL_01334 5.4e-183 S AAA domain
DOJOIFCL_01335 2.6e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DOJOIFCL_01336 1.4e-23
DOJOIFCL_01337 7.3e-161 czcD P cation diffusion facilitator family transporter
DOJOIFCL_01338 1.4e-124 gpmB G Belongs to the phosphoglycerate mutase family
DOJOIFCL_01339 6e-132 S membrane transporter protein
DOJOIFCL_01340 1.9e-118 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
DOJOIFCL_01341 6.3e-105 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
DOJOIFCL_01342 1.2e-49 S Protein of unknown function (DUF3021)
DOJOIFCL_01343 2.8e-65 K LytTr DNA-binding domain
DOJOIFCL_01344 1.2e-10
DOJOIFCL_01345 2.6e-56 K Acetyltransferase (GNAT) domain
DOJOIFCL_01346 1.9e-12 L Transposase
DOJOIFCL_01347 1.4e-16 L Transposase
DOJOIFCL_01348 1.5e-95 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
DOJOIFCL_01349 2.8e-244 nhaC C Na H antiporter NhaC
DOJOIFCL_01350 1.4e-147 I transferase activity, transferring acyl groups other than amino-acyl groups
DOJOIFCL_01351 2.6e-57
DOJOIFCL_01352 4.3e-108 ybhL S Belongs to the BI1 family
DOJOIFCL_01353 2.7e-171 yegS 2.7.1.107 G Lipid kinase
DOJOIFCL_01354 2.7e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DOJOIFCL_01355 2.9e-268 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
DOJOIFCL_01356 1.5e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DOJOIFCL_01357 5.8e-203 camS S sex pheromone
DOJOIFCL_01358 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
DOJOIFCL_01359 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
DOJOIFCL_01360 5.2e-84 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
DOJOIFCL_01362 4.1e-83 ydcK S Belongs to the SprT family
DOJOIFCL_01363 7.7e-134 M Glycosyltransferase sugar-binding region containing DXD motif
DOJOIFCL_01364 3e-257 epsU S Polysaccharide biosynthesis protein
DOJOIFCL_01365 7e-225 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
DOJOIFCL_01366 0.0 pacL 3.6.3.8 P P-type ATPase
DOJOIFCL_01367 1.4e-204 tnpB L Putative transposase DNA-binding domain
DOJOIFCL_01368 1.2e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
DOJOIFCL_01369 2.4e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DOJOIFCL_01370 1.7e-204 csaB M Glycosyl transferases group 1
DOJOIFCL_01371 2.1e-134 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
DOJOIFCL_01372 5.1e-71 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
DOJOIFCL_01373 4.6e-123 gntR1 K UTRA
DOJOIFCL_01374 3.3e-179
DOJOIFCL_01375 3.4e-45 oppA2 E ABC transporter, substratebinding protein
DOJOIFCL_01376 4.4e-239 oppA2 E ABC transporter, substratebinding protein
DOJOIFCL_01379 3.2e-240 npr 1.11.1.1 C NADH oxidase
DOJOIFCL_01380 6.6e-11
DOJOIFCL_01381 1.3e-22 3.6.4.12 S transposase or invertase
DOJOIFCL_01382 6.7e-228 slpX S SLAP domain
DOJOIFCL_01383 4.4e-144 K SIS domain
DOJOIFCL_01384 8.1e-120 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
DOJOIFCL_01385 2.7e-185 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
DOJOIFCL_01386 6.5e-210 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
DOJOIFCL_01388 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
DOJOIFCL_01390 1.2e-115 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
DOJOIFCL_01391 6.6e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
DOJOIFCL_01392 2.6e-89 G Histidine phosphatase superfamily (branch 1)
DOJOIFCL_01393 1.2e-105 G Phosphoglycerate mutase family
DOJOIFCL_01394 4.7e-159 D nuclear chromosome segregation
DOJOIFCL_01395 2.5e-119 K helix_turn_helix, mercury resistance
DOJOIFCL_01396 7.5e-231 pbuG S permease
DOJOIFCL_01397 2.9e-247 mntH P H( )-stimulated, divalent metal cation uptake system
DOJOIFCL_01398 5.3e-45 yitW S Iron-sulfur cluster assembly protein
DOJOIFCL_01399 2e-266 sufB O assembly protein SufB
DOJOIFCL_01400 7e-59 nifU C SUF system FeS assembly protein, NifU family
DOJOIFCL_01401 5.3e-178 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DOJOIFCL_01402 3.5e-174 sufD O FeS assembly protein SufD
DOJOIFCL_01403 2.8e-140 sufC O FeS assembly ATPase SufC
DOJOIFCL_01404 6.2e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DOJOIFCL_01405 6.4e-251 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DOJOIFCL_01406 7.7e-188 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
DOJOIFCL_01409 3.9e-206 4.2.1.126 S Bacterial protein of unknown function (DUF871)
DOJOIFCL_01410 3.2e-189 asnA 6.3.1.1 F aspartate--ammonia ligase
DOJOIFCL_01411 1.8e-230 steT_1 E amino acid
DOJOIFCL_01412 2.2e-139 puuD S peptidase C26
DOJOIFCL_01414 2.4e-172 V HNH endonuclease
DOJOIFCL_01415 6.4e-135 S PFAM Archaeal ATPase
DOJOIFCL_01416 9.2e-248 yifK E Amino acid permease
DOJOIFCL_01417 9.7e-234 cycA E Amino acid permease
DOJOIFCL_01418 4.3e-115 lepB 3.4.21.89 U Belongs to the peptidase S26 family
DOJOIFCL_01419 0.0 clpE O AAA domain (Cdc48 subfamily)
DOJOIFCL_01420 2.2e-165 S Alpha/beta hydrolase of unknown function (DUF915)
DOJOIFCL_01421 2.2e-238 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DOJOIFCL_01422 3.1e-21
DOJOIFCL_01423 3.3e-140 repB EP Plasmid replication protein
DOJOIFCL_01424 2.2e-78 S helix_turn_helix, Deoxyribose operon repressor
DOJOIFCL_01425 2e-39 S Transglycosylase associated protein
DOJOIFCL_01426 1.4e-173 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DOJOIFCL_01427 2e-177 yvdE K helix_turn _helix lactose operon repressor
DOJOIFCL_01428 7e-144 ptp2 3.1.3.48 T Tyrosine phosphatase family
DOJOIFCL_01429 1e-292 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
DOJOIFCL_01430 1.5e-144 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
DOJOIFCL_01431 1.1e-183 G Transmembrane secretion effector
DOJOIFCL_01432 6.1e-136 V ABC transporter transmembrane region
DOJOIFCL_01433 3.6e-106 L transposase, IS605 OrfB family
DOJOIFCL_01434 3.4e-27
DOJOIFCL_01435 8e-22 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
DOJOIFCL_01436 5.4e-53 hipB K sequence-specific DNA binding
DOJOIFCL_01437 4.8e-42 S SnoaL-like domain
DOJOIFCL_01438 0.0 L PLD-like domain
DOJOIFCL_01439 7.9e-291 ytgP S Polysaccharide biosynthesis protein
DOJOIFCL_01440 1.9e-36
DOJOIFCL_01441 0.0 XK27_06780 V ABC transporter permease
DOJOIFCL_01442 5.1e-125 XK27_06785 V ABC transporter, ATP-binding protein
DOJOIFCL_01443 3e-37
DOJOIFCL_01444 2.4e-110 K WHG domain
DOJOIFCL_01445 6.4e-96 nqr 1.5.1.36 S NADPH-dependent FMN reductase
DOJOIFCL_01446 2e-97 azr 1.5.1.36 S NADPH-dependent FMN reductase
DOJOIFCL_01447 6e-151 3.1.3.48 T Tyrosine phosphatase family
DOJOIFCL_01448 2.5e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
DOJOIFCL_01450 3e-53 cvpA S Colicin V production protein
DOJOIFCL_01451 9.9e-197 S Uncharacterised protein family (UPF0236)
DOJOIFCL_01452 8.4e-25 G Peptidase_C39 like family
DOJOIFCL_01453 2.8e-162 M NlpC/P60 family
DOJOIFCL_01454 6.5e-91 G Peptidase_C39 like family
DOJOIFCL_01455 1.8e-175 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
DOJOIFCL_01456 2.8e-77 P Cobalt transport protein
DOJOIFCL_01457 4.8e-249 cbiO1 S ABC transporter, ATP-binding protein
DOJOIFCL_01458 7.9e-174 K helix_turn_helix, arabinose operon control protein
DOJOIFCL_01459 8.3e-157 htpX O Belongs to the peptidase M48B family
DOJOIFCL_01460 5.1e-96 lemA S LemA family
DOJOIFCL_01461 1.6e-189 ybiR P Citrate transporter
DOJOIFCL_01462 2e-70 S Iron-sulphur cluster biosynthesis
DOJOIFCL_01463 1.9e-309 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
DOJOIFCL_01464 1.2e-17
DOJOIFCL_01465 3.1e-107 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
DOJOIFCL_01466 1.7e-201 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DOJOIFCL_01467 2.2e-120 lsa S ABC transporter
DOJOIFCL_01468 3.2e-225 L Transposase
DOJOIFCL_01469 2e-10 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
DOJOIFCL_01470 9.5e-82 XK27_04435 3.5.4.5 J FR47-like protein
DOJOIFCL_01471 1.4e-36 S Cytochrome B5
DOJOIFCL_01472 6e-168 arbZ I Phosphate acyltransferases
DOJOIFCL_01473 1.6e-182 arbY M Glycosyl transferase family 8
DOJOIFCL_01474 5e-184 arbY M Glycosyl transferase family 8
DOJOIFCL_01475 5e-156 arbx M Glycosyl transferase family 8
DOJOIFCL_01476 1.6e-148 arbV 2.3.1.51 I Acyl-transferase
DOJOIFCL_01478 4.9e-34
DOJOIFCL_01480 4.8e-131 K response regulator
DOJOIFCL_01481 2.2e-305 vicK 2.7.13.3 T Histidine kinase
DOJOIFCL_01482 1.6e-257 yycH S YycH protein
DOJOIFCL_01483 3.4e-149 yycI S YycH protein
DOJOIFCL_01484 4.1e-147 vicX 3.1.26.11 S domain protein
DOJOIFCL_01485 1.6e-161 htrA 3.4.21.107 O serine protease
DOJOIFCL_01486 1e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
DOJOIFCL_01487 3.4e-100 2.7.6.5 T Region found in RelA / SpoT proteins
DOJOIFCL_01488 3.2e-105 K response regulator
DOJOIFCL_01489 1.1e-103 sptS 2.7.13.3 T Histidine kinase
DOJOIFCL_01490 2.6e-103 sptS 2.7.13.3 T Histidine kinase
DOJOIFCL_01491 7.2e-209 EGP Major facilitator Superfamily
DOJOIFCL_01492 2.3e-69 O OsmC-like protein
DOJOIFCL_01493 2.2e-85 S Protein of unknown function (DUF805)
DOJOIFCL_01494 2.2e-78
DOJOIFCL_01495 3.1e-93
DOJOIFCL_01496 9.9e-180
DOJOIFCL_01497 5.8e-83 S Fic/DOC family
DOJOIFCL_01498 1.3e-274 yjeM E Amino Acid
DOJOIFCL_01499 1.1e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DOJOIFCL_01500 5.8e-211 M Glycosyl hydrolases family 25
DOJOIFCL_01501 8e-111 XK27_00160 S Domain of unknown function (DUF5052)
DOJOIFCL_01502 4.1e-67
DOJOIFCL_01503 5.4e-203 xerS L Belongs to the 'phage' integrase family
DOJOIFCL_01504 1.5e-304 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
DOJOIFCL_01505 1.5e-115 L COG3547 Transposase and inactivated derivatives
DOJOIFCL_01506 1.4e-118 D Alpha beta
DOJOIFCL_01507 4.6e-263 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DOJOIFCL_01508 1.5e-144 recX 2.4.1.337 GT4 S Regulatory protein RecX
DOJOIFCL_01509 1.6e-85
DOJOIFCL_01510 2.7e-74
DOJOIFCL_01511 1.4e-140 hlyX S Transporter associated domain
DOJOIFCL_01512 9.4e-305 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
DOJOIFCL_01513 2.3e-44 XK27_09445 S Domain of unknown function (DUF1827)
DOJOIFCL_01514 0.0 clpE O Belongs to the ClpA ClpB family
DOJOIFCL_01518 0.0 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
DOJOIFCL_01519 4.2e-61 V Abi-like protein
DOJOIFCL_01520 0.0 L AAA domain
DOJOIFCL_01521 1.8e-48 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
DOJOIFCL_01522 1.3e-94 K Transcriptional regulator
DOJOIFCL_01523 6.1e-61 K Transcriptional regulator
DOJOIFCL_01524 2e-225 S cog cog1373
DOJOIFCL_01525 9.7e-146 S haloacid dehalogenase-like hydrolase
DOJOIFCL_01526 2.5e-226 pbuG S permease
DOJOIFCL_01527 4.9e-122 ung2 3.2.2.27 L Uracil-DNA glycosylase
DOJOIFCL_01528 1.4e-214 S SLAP domain
DOJOIFCL_01529 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
DOJOIFCL_01530 1.9e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
DOJOIFCL_01531 5.8e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
DOJOIFCL_01532 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
DOJOIFCL_01533 1.7e-228 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DOJOIFCL_01534 6e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
DOJOIFCL_01535 2.7e-258 yfnA E amino acid
DOJOIFCL_01536 0.0 V FtsX-like permease family
DOJOIFCL_01537 4.1e-133 cysA V ABC transporter, ATP-binding protein
DOJOIFCL_01538 3.4e-23
DOJOIFCL_01540 2.5e-288 pipD E Dipeptidase
DOJOIFCL_01541 3.6e-161 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
DOJOIFCL_01542 0.0 smc D Required for chromosome condensation and partitioning
DOJOIFCL_01543 1.9e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
DOJOIFCL_01544 2.1e-308 oppA E ABC transporter substrate-binding protein
DOJOIFCL_01545 1.9e-22 K Putative DNA-binding domain
DOJOIFCL_01546 7.6e-239 pyrP F Permease
DOJOIFCL_01547 8.8e-90 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
DOJOIFCL_01548 9.2e-262 emrY EGP Major facilitator Superfamily
DOJOIFCL_01549 1.2e-196 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
DOJOIFCL_01550 2e-288 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
DOJOIFCL_01551 1.1e-220 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
DOJOIFCL_01552 0.0 lacZ 3.2.1.23 G -beta-galactosidase
DOJOIFCL_01553 2.6e-103 lacS G Transporter
DOJOIFCL_01554 8.9e-207 lacS G Transporter
DOJOIFCL_01555 5.4e-165 lacR K Transcriptional regulator
DOJOIFCL_01556 7.2e-221 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
DOJOIFCL_01557 9.3e-80 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
DOJOIFCL_01558 2.1e-142 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
DOJOIFCL_01559 5.3e-189 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
DOJOIFCL_01560 7.6e-163 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
DOJOIFCL_01561 2e-106 K Transcriptional regulator, AbiEi antitoxin
DOJOIFCL_01562 1.2e-188 K Periplasmic binding protein-like domain
DOJOIFCL_01563 1.3e-142 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
DOJOIFCL_01564 1.3e-129 potB P ABC transporter permease
DOJOIFCL_01565 4.8e-127 potC P ABC transporter permease
DOJOIFCL_01566 7.3e-208 potD P ABC transporter
DOJOIFCL_01567 6.4e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
DOJOIFCL_01568 2e-172 ybbR S YbbR-like protein
DOJOIFCL_01569 3.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DOJOIFCL_01570 9.5e-26 S hydrolase
DOJOIFCL_01571 1.1e-101 S hydrolase
DOJOIFCL_01572 1.8e-75 K Penicillinase repressor
DOJOIFCL_01573 1.6e-118
DOJOIFCL_01574 7.4e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DOJOIFCL_01575 3.8e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
DOJOIFCL_01576 8.3e-143 licT K CAT RNA binding domain
DOJOIFCL_01577 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
DOJOIFCL_01578 1e-297 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
DOJOIFCL_01579 1e-149 D Alpha beta
DOJOIFCL_01580 1.2e-92 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
DOJOIFCL_01581 3.7e-26 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
DOJOIFCL_01582 5.2e-112 ica2 GT2 M Glycosyl transferase family group 2
DOJOIFCL_01583 8.2e-36
DOJOIFCL_01584 2.2e-90 2.7.7.65 T GGDEF domain
DOJOIFCL_01585 8.8e-82 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
DOJOIFCL_01587 0.0 mco Q Multicopper oxidase
DOJOIFCL_01588 1.9e-25
DOJOIFCL_01589 7.1e-158 metQ1 P Belongs to the nlpA lipoprotein family
DOJOIFCL_01590 4.3e-169 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
DOJOIFCL_01591 2e-61 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
DOJOIFCL_01592 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
DOJOIFCL_01593 7.1e-200 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
DOJOIFCL_01594 1e-156 cjaA ET ABC transporter substrate-binding protein
DOJOIFCL_01595 1.5e-127 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
DOJOIFCL_01596 5.3e-116 P ABC transporter permease
DOJOIFCL_01597 9.1e-54 papP P ABC transporter, permease protein
DOJOIFCL_01600 4.7e-61 mtlR K Mga helix-turn-helix domain
DOJOIFCL_01601 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
DOJOIFCL_01602 2.1e-79 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DOJOIFCL_01603 1e-218 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
DOJOIFCL_01604 3.2e-28 4.1.1.44 S Carboxymuconolactone decarboxylase family
DOJOIFCL_01605 2.3e-78 4.1.1.44 S Carboxymuconolactone decarboxylase family
DOJOIFCL_01606 2.1e-32
DOJOIFCL_01607 3.7e-59 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
DOJOIFCL_01608 2.3e-156 K Helix-turn-helix XRE-family like proteins
DOJOIFCL_01609 3.9e-298 V ABC transporter transmembrane region
DOJOIFCL_01610 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
DOJOIFCL_01618 7.9e-224 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
DOJOIFCL_01619 7.6e-202 cpoA GT4 M Glycosyltransferase, group 1 family protein
DOJOIFCL_01620 4.1e-176 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
DOJOIFCL_01621 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
DOJOIFCL_01622 1.7e-29 secG U Preprotein translocase
DOJOIFCL_01623 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
DOJOIFCL_01624 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
DOJOIFCL_01625 1.3e-30
DOJOIFCL_01626 3.6e-69 T Toxin-antitoxin system, toxin component, MazF family
DOJOIFCL_01627 3.7e-102 L Integrase
DOJOIFCL_01628 4.9e-161 L PFAM transposase, IS4 family protein
DOJOIFCL_01629 2.7e-36 yyaR K Acetyltransferase (GNAT) domain
DOJOIFCL_01630 3.2e-72 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
DOJOIFCL_01631 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
DOJOIFCL_01632 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
DOJOIFCL_01633 1.1e-152 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
DOJOIFCL_01634 8.6e-199 tnpB L Putative transposase DNA-binding domain
DOJOIFCL_01635 4.2e-84 yqeG S HAD phosphatase, family IIIA
DOJOIFCL_01636 4.4e-200 yqeH S Ribosome biogenesis GTPase YqeH
DOJOIFCL_01637 4.4e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
DOJOIFCL_01638 6.6e-110 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
DOJOIFCL_01639 5.3e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
DOJOIFCL_01640 4.6e-216 ylbM S Belongs to the UPF0348 family
DOJOIFCL_01641 4.7e-97 yceD S Uncharacterized ACR, COG1399
DOJOIFCL_01642 1.2e-126 K response regulator
DOJOIFCL_01643 1.3e-277 arlS 2.7.13.3 T Histidine kinase
DOJOIFCL_01644 1e-12
DOJOIFCL_01645 1.5e-97 S CAAX protease self-immunity
DOJOIFCL_01646 6.1e-224 S SLAP domain
DOJOIFCL_01647 5.7e-83 S Aminoacyl-tRNA editing domain
DOJOIFCL_01648 2.4e-162 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
DOJOIFCL_01649 2.9e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
DOJOIFCL_01650 2.2e-134 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DOJOIFCL_01651 4.5e-58 yodB K Transcriptional regulator, HxlR family
DOJOIFCL_01653 2.4e-17 S CAAX protease self-immunity
DOJOIFCL_01654 1.4e-22 S CAAX protease self-immunity
DOJOIFCL_01655 7.6e-26 WQ51_00220 K Helix-turn-helix XRE-family like proteins
DOJOIFCL_01657 1.6e-96 ybaT E Amino acid permease
DOJOIFCL_01658 1.7e-07 S LPXTG cell wall anchor motif
DOJOIFCL_01659 2.6e-146 S Putative ABC-transporter type IV
DOJOIFCL_01661 9.6e-28 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
DOJOIFCL_01662 7.5e-234 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
DOJOIFCL_01663 2e-116 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
DOJOIFCL_01664 1.2e-232 oppA E ABC transporter substrate-binding protein
DOJOIFCL_01665 8.6e-97 oppA E ABC transporter substrate-binding protein
DOJOIFCL_01666 1.4e-176 K AI-2E family transporter
DOJOIFCL_01667 2.6e-103 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
DOJOIFCL_01668 4.1e-18
DOJOIFCL_01669 5.2e-248 G Major Facilitator
DOJOIFCL_01670 7.4e-205 L COG2826 Transposase and inactivated derivatives, IS30 family
DOJOIFCL_01671 1.9e-80 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
DOJOIFCL_01672 1.4e-115 lacA 2.3.1.79 S Transferase hexapeptide repeat
DOJOIFCL_01673 9.3e-204 pbpX1 V Beta-lactamase
DOJOIFCL_01674 2.8e-98 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
DOJOIFCL_01675 7.5e-95 S ECF-type riboflavin transporter, S component
DOJOIFCL_01676 1.3e-229 S Putative peptidoglycan binding domain
DOJOIFCL_01677 9e-83 K Acetyltransferase (GNAT) domain
DOJOIFCL_01678 2.2e-251 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
DOJOIFCL_01679 1.9e-191 yrvN L AAA C-terminal domain
DOJOIFCL_01680 8.2e-64 spxA_2 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
DOJOIFCL_01681 3.3e-283 treB G phosphotransferase system
DOJOIFCL_01682 1.2e-100 treR K UTRA
DOJOIFCL_01683 1e-288 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
DOJOIFCL_01684 1e-105 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
DOJOIFCL_01685 1.4e-107 M Transport protein ComB
DOJOIFCL_01686 2.2e-129 blpT
DOJOIFCL_01690 3e-21
DOJOIFCL_01691 3.7e-83
DOJOIFCL_01692 8.2e-31 yozG K Transcriptional regulator
DOJOIFCL_01693 2e-23
DOJOIFCL_01694 1.7e-67
DOJOIFCL_01695 1.1e-164 natA S ABC transporter, ATP-binding protein
DOJOIFCL_01696 1.8e-218 natB CP ABC-2 family transporter protein
DOJOIFCL_01697 1.8e-136 fruR K DeoR C terminal sensor domain
DOJOIFCL_01698 2.2e-168 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
DOJOIFCL_01699 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
DOJOIFCL_01700 5.4e-41 K helix_turn_helix, Arsenical Resistance Operon Repressor
DOJOIFCL_01701 1.6e-147 psaA P Belongs to the bacterial solute-binding protein 9 family
DOJOIFCL_01702 1.6e-117 fhuC P ABC transporter
DOJOIFCL_01703 5e-129 znuB U ABC 3 transport family
DOJOIFCL_01704 2e-264 lctP C L-lactate permease
DOJOIFCL_01705 6.7e-89 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
DOJOIFCL_01706 1.5e-216 2.1.1.14 E methionine synthase, vitamin-B12 independent
DOJOIFCL_01707 1.2e-11
DOJOIFCL_01708 1.6e-25 K Helix-turn-helix XRE-family like proteins
DOJOIFCL_01710 3e-112 L PFAM transposase IS116 IS110 IS902
DOJOIFCL_01711 4.1e-133 L Belongs to the 'phage' integrase family
DOJOIFCL_01713 6.3e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DOJOIFCL_01714 1.9e-186 ytxK 2.1.1.72 L N-6 DNA Methylase
DOJOIFCL_01715 1.6e-21
DOJOIFCL_01716 3.8e-77 comGF U Putative Competence protein ComGF
DOJOIFCL_01717 2.3e-41
DOJOIFCL_01718 1.8e-69
DOJOIFCL_01719 3.1e-43 comGC U competence protein ComGC
DOJOIFCL_01720 1.7e-171 comGB NU type II secretion system
DOJOIFCL_01721 1.7e-179 comGA NU Type II IV secretion system protein
DOJOIFCL_01722 8.9e-133 yebC K Transcriptional regulatory protein
DOJOIFCL_01723 7.6e-94 S VanZ like family
DOJOIFCL_01724 3.5e-101 ylbE GM NAD(P)H-binding
DOJOIFCL_01725 3.7e-27 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DOJOIFCL_01727 1.3e-160 L hmm pf00665
DOJOIFCL_01728 5.8e-100 L Helix-turn-helix domain
DOJOIFCL_01729 2e-310 E Amino acid permease
DOJOIFCL_01730 1.9e-245 L Transposase IS66 family
DOJOIFCL_01731 8.7e-34 S Transposase C of IS166 homeodomain
DOJOIFCL_01732 9.3e-64 L PFAM IS66 Orf2 family protein
DOJOIFCL_01733 7.7e-22
DOJOIFCL_01734 8.4e-265 S Fibronectin type III domain
DOJOIFCL_01735 4.5e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DOJOIFCL_01736 3.4e-53
DOJOIFCL_01738 4.6e-257 pepC 3.4.22.40 E aminopeptidase
DOJOIFCL_01739 1.3e-122 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
DOJOIFCL_01740 5e-301 oppA E ABC transporter, substratebinding protein
DOJOIFCL_01741 1.6e-310 oppA E ABC transporter, substratebinding protein
DOJOIFCL_01742 4.4e-172 S Domain of unknown function (DUF389)
DOJOIFCL_01743 3.3e-237 L COG2963 Transposase and inactivated derivatives
DOJOIFCL_01744 4.7e-46 pspC KT PspC domain
DOJOIFCL_01746 1.3e-240 dacA 3.4.16.4 M Belongs to the peptidase S11 family
DOJOIFCL_01747 2.8e-154 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DOJOIFCL_01748 6.7e-98 M ErfK YbiS YcfS YnhG
DOJOIFCL_01749 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
DOJOIFCL_01750 4.6e-171 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
DOJOIFCL_01751 1.8e-200 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
DOJOIFCL_01752 2.2e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
DOJOIFCL_01753 8.3e-213 yubA S AI-2E family transporter
DOJOIFCL_01754 4.2e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
DOJOIFCL_01755 1.7e-69 WQ51_03320 S Protein of unknown function (DUF1149)
DOJOIFCL_01756 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
DOJOIFCL_01757 9e-223 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
DOJOIFCL_01758 1.9e-236 S Peptidase M16
DOJOIFCL_01759 2.3e-133 IQ Enoyl-(Acyl carrier protein) reductase
DOJOIFCL_01760 5.2e-97 ymfM S Helix-turn-helix domain
DOJOIFCL_01761 1.1e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DOJOIFCL_01762 2.7e-194 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DOJOIFCL_01763 7.4e-220 rny S Endoribonuclease that initiates mRNA decay
DOJOIFCL_01764 1.3e-210 tagO 2.7.8.33, 2.7.8.35 M transferase
DOJOIFCL_01765 5.1e-119 yvyE 3.4.13.9 S YigZ family
DOJOIFCL_01766 4.7e-246 comFA L Helicase C-terminal domain protein
DOJOIFCL_01767 9.4e-132 comFC S Competence protein
DOJOIFCL_01768 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DOJOIFCL_01769 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
DOJOIFCL_01770 4.6e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DOJOIFCL_01771 5.1e-17
DOJOIFCL_01772 5.8e-180 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
DOJOIFCL_01773 9.2e-158 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
DOJOIFCL_01774 1.1e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
DOJOIFCL_01775 3.9e-181 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
DOJOIFCL_01776 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
DOJOIFCL_01777 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
DOJOIFCL_01778 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
DOJOIFCL_01779 4.1e-90 S Short repeat of unknown function (DUF308)
DOJOIFCL_01780 6.2e-165 rapZ S Displays ATPase and GTPase activities
DOJOIFCL_01781 4e-195 ybhK S Required for morphogenesis under gluconeogenic growth conditions
DOJOIFCL_01782 2.1e-171 whiA K May be required for sporulation
DOJOIFCL_01783 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
DOJOIFCL_01784 0.0 S SH3-like domain
DOJOIFCL_01785 4.9e-111 ybbL S ABC transporter, ATP-binding protein
DOJOIFCL_01786 2.5e-130 ybbM S Uncharacterised protein family (UPF0014)
DOJOIFCL_01787 6.3e-78 mraZ K Belongs to the MraZ family
DOJOIFCL_01788 7.2e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
DOJOIFCL_01789 1.8e-54 ftsL D Cell division protein FtsL
DOJOIFCL_01790 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
DOJOIFCL_01791 1.5e-175 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DOJOIFCL_01792 5e-262 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DOJOIFCL_01793 3.7e-207 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DOJOIFCL_01794 4.5e-152 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
DOJOIFCL_01795 1.3e-246 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
DOJOIFCL_01796 1.7e-206 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DOJOIFCL_01797 7.3e-74 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
DOJOIFCL_01798 1.7e-45 yggT S YGGT family
DOJOIFCL_01799 5.7e-149 ylmH S S4 domain protein
DOJOIFCL_01800 2.8e-74 gpsB D DivIVA domain protein
DOJOIFCL_01801 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DOJOIFCL_01802 3.6e-31 cspA K 'Cold-shock' DNA-binding domain
DOJOIFCL_01803 2.8e-102 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
DOJOIFCL_01804 6.7e-37
DOJOIFCL_01805 1.2e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DOJOIFCL_01806 3.2e-217 iscS 2.8.1.7 E Aminotransferase class V
DOJOIFCL_01807 5.4e-56 XK27_04120 S Putative amino acid metabolism
DOJOIFCL_01808 5.1e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
DOJOIFCL_01809 3.9e-127 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
DOJOIFCL_01810 8.3e-106 S Repeat protein
DOJOIFCL_01811 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
DOJOIFCL_01812 1.6e-294 L Nuclease-related domain
DOJOIFCL_01813 2.3e-164 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
DOJOIFCL_01815 1.2e-134 EGP Major facilitator Superfamily
DOJOIFCL_01816 4e-150 3.1.3.102, 3.1.3.104 S haloacid dehalogenase-like hydrolase
DOJOIFCL_01817 0.0 tetP J elongation factor G
DOJOIFCL_01818 3.5e-160 yvgN C Aldo keto reductase
DOJOIFCL_01819 2e-155 P CorA-like Mg2+ transporter protein
DOJOIFCL_01820 5.6e-132 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
DOJOIFCL_01821 1e-132 ABC-SBP S ABC transporter
DOJOIFCL_01822 1.3e-24 ABC-SBP S ABC transporter
DOJOIFCL_01823 5.6e-121 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
DOJOIFCL_01824 2.4e-136 XK27_08845 S ABC transporter, ATP-binding protein
DOJOIFCL_01825 1.7e-153 ydjP I Alpha/beta hydrolase family
DOJOIFCL_01826 6.9e-195 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
DOJOIFCL_01827 1.2e-43 citD C Covalent carrier of the coenzyme of citrate lyase
DOJOIFCL_01828 2.4e-167 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
DOJOIFCL_01829 2.1e-288 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
DOJOIFCL_01830 9.3e-72 yeaL S Protein of unknown function (DUF441)
DOJOIFCL_01831 3.5e-21
DOJOIFCL_01832 3.6e-146 cbiQ P cobalt transport
DOJOIFCL_01833 0.0 ykoD P ABC transporter, ATP-binding protein
DOJOIFCL_01834 1.5e-95 S UPF0397 protein
DOJOIFCL_01835 2.9e-66 S Domain of unknown function DUF1828
DOJOIFCL_01836 5.5e-09
DOJOIFCL_01837 1.5e-50
DOJOIFCL_01838 2.6e-177 citR K Putative sugar-binding domain
DOJOIFCL_01839 6.2e-249 yjjP S Putative threonine/serine exporter
DOJOIFCL_01841 5.9e-37 M domain protein
DOJOIFCL_01842 8.2e-85 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DOJOIFCL_01843 6.5e-176 prmA J Ribosomal protein L11 methyltransferase
DOJOIFCL_01844 8.5e-60
DOJOIFCL_01845 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DOJOIFCL_01846 6e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
DOJOIFCL_01847 5.8e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
DOJOIFCL_01848 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
DOJOIFCL_01849 1.2e-222 patA 2.6.1.1 E Aminotransferase
DOJOIFCL_01850 2e-234 mepA V MATE efflux family protein
DOJOIFCL_01851 3.5e-71 yjaB 2.3.1.181 K Acetyltransferase (GNAT) domain
DOJOIFCL_01852 1.8e-58 S Putative adhesin
DOJOIFCL_01853 5.6e-101 yihX 3.1.3.10, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
DOJOIFCL_01854 1.7e-20 1.3.5.4 C FAD dependent oxidoreductase
DOJOIFCL_01855 1.1e-83 dps P Belongs to the Dps family
DOJOIFCL_01856 2e-178 MA20_14895 S Conserved hypothetical protein 698
DOJOIFCL_01858 5.6e-191 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
DOJOIFCL_01859 1.2e-299 I Protein of unknown function (DUF2974)
DOJOIFCL_01860 2.1e-194 pbpX1 V Beta-lactamase
DOJOIFCL_01861 2.6e-197 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DOJOIFCL_01862 2.7e-216 aspC 2.6.1.1 E Aminotransferase
DOJOIFCL_01863 7e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
DOJOIFCL_01864 9.8e-177 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DOJOIFCL_01865 2e-219 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
DOJOIFCL_01866 2.8e-75 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
DOJOIFCL_01867 1.3e-246 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
DOJOIFCL_01868 1.3e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
DOJOIFCL_01869 2.3e-192 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
DOJOIFCL_01870 3.4e-175 yjeM E Amino Acid
DOJOIFCL_01871 7.8e-39 yjeM E Amino Acid
DOJOIFCL_01872 1.4e-104 engB D Necessary for normal cell division and for the maintenance of normal septation
DOJOIFCL_01873 2e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
DOJOIFCL_01874 5.8e-215 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
DOJOIFCL_01875 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DOJOIFCL_01876 1.3e-148
DOJOIFCL_01877 3e-310 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DOJOIFCL_01878 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
DOJOIFCL_01879 2.6e-34 rpsT J Binds directly to 16S ribosomal RNA
DOJOIFCL_01880 2.6e-175 holA 2.7.7.7 L DNA polymerase III delta subunit
DOJOIFCL_01881 0.0 comEC S Competence protein ComEC
DOJOIFCL_01882 3.1e-79 comEA L Competence protein ComEA
DOJOIFCL_01883 2.4e-187 ylbL T Belongs to the peptidase S16 family
DOJOIFCL_01884 3.6e-82 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
DOJOIFCL_01885 4.5e-97 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
DOJOIFCL_01886 5.1e-54 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
DOJOIFCL_01887 5.9e-211 ftsW D Belongs to the SEDS family
DOJOIFCL_01888 0.0 typA T GTP-binding protein TypA
DOJOIFCL_01889 8.9e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
DOJOIFCL_01890 1.9e-19 L Replication initiation factor
DOJOIFCL_01891 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DOJOIFCL_01892 9.3e-74 nrdI F NrdI Flavodoxin like
DOJOIFCL_01893 3.6e-193 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DOJOIFCL_01894 1.1e-109 tnpR1 L Resolvase, N terminal domain
DOJOIFCL_01895 1.1e-76 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
DOJOIFCL_01896 1.3e-28
DOJOIFCL_01897 1.7e-142 soj D AAA domain
DOJOIFCL_01898 1.9e-166 repA S Replication initiator protein A
DOJOIFCL_01899 8.5e-128 S Fic/DOC family
DOJOIFCL_01900 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
DOJOIFCL_01901 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
DOJOIFCL_01902 7.6e-49 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
DOJOIFCL_01903 6.8e-243 cycA E Amino acid permease
DOJOIFCL_01904 1.3e-85 maa S transferase hexapeptide repeat
DOJOIFCL_01905 3.3e-158 K Transcriptional regulator
DOJOIFCL_01906 1.1e-62 manO S Domain of unknown function (DUF956)
DOJOIFCL_01907 1e-173 manN G system, mannose fructose sorbose family IID component
DOJOIFCL_01908 1.7e-129 manY G PTS system
DOJOIFCL_01909 2.5e-186 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
DOJOIFCL_01910 5.5e-148 S cog cog1373
DOJOIFCL_01911 0.0 4.2.1.53 S Myosin-crossreactive antigen
DOJOIFCL_01912 2e-91 yxdD K Bacterial regulatory proteins, tetR family
DOJOIFCL_01913 1.9e-259 emrY EGP Major facilitator Superfamily
DOJOIFCL_01932 5.3e-26
DOJOIFCL_01933 8.5e-41 ptsH G phosphocarrier protein HPR
DOJOIFCL_01934 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DOJOIFCL_01935 2.6e-61 M Glycosyl hydrolases family 25
DOJOIFCL_01936 1.3e-61 M Glycosyl hydrolases family 25
DOJOIFCL_01937 2.8e-211 yfmL 3.6.4.13 L DEAD DEAH box helicase
DOJOIFCL_01938 1.8e-248 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DOJOIFCL_01940 2e-216 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
DOJOIFCL_01941 6.2e-165 psaA P Belongs to the bacterial solute-binding protein 9 family
DOJOIFCL_01944 1.7e-221 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DOJOIFCL_01945 8.5e-260 qacA EGP Major facilitator Superfamily
DOJOIFCL_01946 1.3e-79 ybbH_2 K Helix-turn-helix domain, rpiR family
DOJOIFCL_01947 3.6e-120 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
DOJOIFCL_01948 1.8e-119 S Putative esterase
DOJOIFCL_01949 4.1e-214 2.7.1.208, 2.7.1.211 G phosphotransferase system
DOJOIFCL_01951 1.4e-262 lmrB EGP Major facilitator Superfamily
DOJOIFCL_01952 4.2e-77 K MerR HTH family regulatory protein
DOJOIFCL_01953 3.1e-139 S Cysteine-rich secretory protein family
DOJOIFCL_01954 4.6e-274 ycaM E amino acid
DOJOIFCL_01955 2.8e-290
DOJOIFCL_01957 3.3e-189 cggR K Putative sugar-binding domain
DOJOIFCL_01958 6.5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
DOJOIFCL_01959 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
DOJOIFCL_01960 1.7e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
DOJOIFCL_01961 6e-199 L COG2826 Transposase and inactivated derivatives, IS30 family
DOJOIFCL_01962 1.2e-94
DOJOIFCL_01963 3.4e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
DOJOIFCL_01964 9.7e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
DOJOIFCL_01965 4.1e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
DOJOIFCL_01966 7e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
DOJOIFCL_01967 4e-98 dnaQ 2.7.7.7 L DNA polymerase III
DOJOIFCL_01968 2e-163 murB 1.3.1.98 M Cell wall formation
DOJOIFCL_01969 1.9e-117 cps1D M Domain of unknown function (DUF4422)
DOJOIFCL_01970 6.7e-110 rfbP M Bacterial sugar transferase
DOJOIFCL_01971 1.4e-144 ywqE 3.1.3.48 GM PHP domain protein
DOJOIFCL_01972 1.3e-121 ywqD 2.7.10.1 D Capsular exopolysaccharide family
DOJOIFCL_01973 6.5e-146 epsB M biosynthesis protein
DOJOIFCL_01974 1.4e-149 brpA K Cell envelope-like function transcriptional attenuator common domain protein
DOJOIFCL_01976 3.8e-216 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DOJOIFCL_01977 3.5e-175 S Cysteine-rich secretory protein family
DOJOIFCL_01978 1.6e-41
DOJOIFCL_01979 2.6e-118 M NlpC/P60 family
DOJOIFCL_01980 4e-59 M NlpC P60 family protein
DOJOIFCL_01981 6e-51 M NlpC P60 family protein
DOJOIFCL_01982 5e-88 M NlpC/P60 family
DOJOIFCL_01983 2.2e-88 gmk2 2.7.4.8 F Guanylate kinase homologues.
DOJOIFCL_01984 3.9e-42
DOJOIFCL_01985 2.9e-279 S O-antigen ligase like membrane protein
DOJOIFCL_01986 3.3e-112
DOJOIFCL_01987 5.3e-21 tnpB L Putative transposase DNA-binding domain
DOJOIFCL_01988 5.5e-77 nrdI F NrdI Flavodoxin like
DOJOIFCL_01989 9.9e-177 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DOJOIFCL_01990 2.5e-68
DOJOIFCL_01991 9.1e-112 yvpB S Peptidase_C39 like family
DOJOIFCL_01992 1.1e-83 S Threonine/Serine exporter, ThrE
DOJOIFCL_01993 2.4e-136 thrE S Putative threonine/serine exporter
DOJOIFCL_01994 8.9e-292 S ABC transporter
DOJOIFCL_01995 8.3e-58
DOJOIFCL_01996 5e-72 rimL J Acetyltransferase (GNAT) domain
DOJOIFCL_01997 1.4e-34
DOJOIFCL_01998 1.2e-30
DOJOIFCL_01999 1.8e-111 S Protein of unknown function (DUF554)
DOJOIFCL_02000 8.7e-197 brpA K Cell envelope-like function transcriptional attenuator common domain protein
DOJOIFCL_02001 0.0 pepF E oligoendopeptidase F
DOJOIFCL_02002 2.9e-31
DOJOIFCL_02003 1.3e-69 doc S Prophage maintenance system killer protein
DOJOIFCL_02006 4.6e-27 S Enterocin A Immunity
DOJOIFCL_02007 1.7e-22 blpT
DOJOIFCL_02008 1.2e-241 S response to antibiotic
DOJOIFCL_02009 4.9e-125
DOJOIFCL_02010 0.0 3.6.3.8 P P-type ATPase
DOJOIFCL_02011 8.7e-66 2.7.1.191 G PTS system fructose IIA component
DOJOIFCL_02012 4.4e-43
DOJOIFCL_02013 5.9e-09
DOJOIFCL_02014 9.4e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
DOJOIFCL_02015 5.3e-136 glvR K Helix-turn-helix domain, rpiR family
DOJOIFCL_02016 2.7e-268 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
DOJOIFCL_02017 5.8e-85 2.3.1.128 K Acetyltransferase (GNAT) domain
DOJOIFCL_02018 2e-157 S reductase
DOJOIFCL_02019 9.3e-35
DOJOIFCL_02020 4.4e-103 K Putative DNA-binding domain
DOJOIFCL_02021 1.3e-141 yfeO P Voltage gated chloride channel
DOJOIFCL_02022 1.4e-184 5.3.3.2 C FMN-dependent dehydrogenase
DOJOIFCL_02023 4e-51
DOJOIFCL_02024 2.1e-42
DOJOIFCL_02025 6.4e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DOJOIFCL_02026 9.5e-297 ybeC E amino acid
DOJOIFCL_02027 2.6e-157 S Sucrose-6F-phosphate phosphohydrolase
DOJOIFCL_02028 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
DOJOIFCL_02029 2.5e-39 rpmE2 J Ribosomal protein L31
DOJOIFCL_02030 8e-260 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
DOJOIFCL_02031 1.6e-250 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
DOJOIFCL_02032 1.7e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
DOJOIFCL_02033 1e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DOJOIFCL_02034 3.4e-129 S (CBS) domain
DOJOIFCL_02035 1.5e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
DOJOIFCL_02036 5.1e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
DOJOIFCL_02037 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DOJOIFCL_02038 1.6e-33 yabO J S4 domain protein
DOJOIFCL_02039 6.8e-60 divIC D Septum formation initiator
DOJOIFCL_02040 1.8e-62 yabR J S1 RNA binding domain
DOJOIFCL_02041 1.5e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
DOJOIFCL_02042 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DOJOIFCL_02043 9.7e-166 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
DOJOIFCL_02044 2e-194 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DOJOIFCL_02045 1.7e-298 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
DOJOIFCL_02046 3.2e-19
DOJOIFCL_02048 2e-171 M Glycosyl hydrolases family 25
DOJOIFCL_02049 1.7e-29
DOJOIFCL_02050 4.3e-17
DOJOIFCL_02053 2.4e-18 S Phage uncharacterised protein (Phage_XkdX)
DOJOIFCL_02054 6.4e-39
DOJOIFCL_02057 1.2e-35
DOJOIFCL_02058 2.9e-09
DOJOIFCL_02059 1.4e-114 Z012_12235 S Baseplate J-like protein
DOJOIFCL_02060 7.4e-29
DOJOIFCL_02061 8.7e-36
DOJOIFCL_02062 1.9e-102
DOJOIFCL_02063 2.7e-46
DOJOIFCL_02064 3.8e-59 M LysM domain
DOJOIFCL_02065 1e-220 3.4.14.13 M Phage tail tape measure protein TP901
DOJOIFCL_02067 2.9e-09
DOJOIFCL_02068 9.3e-29
DOJOIFCL_02069 3.5e-103 Z012_02110 S Protein of unknown function (DUF3383)
DOJOIFCL_02070 4.3e-31
DOJOIFCL_02071 1.6e-25
DOJOIFCL_02072 1e-29
DOJOIFCL_02073 9.2e-20 S Protein of unknown function (DUF4054)
DOJOIFCL_02074 2.4e-93 Z012_11565 S Uncharacterized protein conserved in bacteria (DUF2184)
DOJOIFCL_02075 4.1e-34
DOJOIFCL_02076 1.6e-57 S Uncharacterized protein conserved in bacteria (DUF2213)
DOJOIFCL_02077 5e-12 S Lysin motif
DOJOIFCL_02078 1.3e-47 S Phage Mu protein F like protein
DOJOIFCL_02079 6.2e-135 S Protein of unknown function (DUF1073)
DOJOIFCL_02080 1.1e-201 S Terminase-like family
DOJOIFCL_02081 3e-19 ps333 L Terminase small subunit
DOJOIFCL_02084 3.3e-09 arpU S Phage transcriptional regulator, ArpU family
DOJOIFCL_02087 3.8e-219 XK27_11280 S Psort location CytoplasmicMembrane, score
DOJOIFCL_02095 1.2e-100 L Helix-turn-helix domain
DOJOIFCL_02096 5.3e-131 S ERF superfamily
DOJOIFCL_02097 1.6e-128 S Protein of unknown function (DUF1351)
DOJOIFCL_02098 4.6e-45
DOJOIFCL_02100 5.5e-18
DOJOIFCL_02101 1.8e-31 S Helix-turn-helix domain
DOJOIFCL_02107 4.9e-94 S DNA binding
DOJOIFCL_02108 1.4e-17 K Helix-turn-helix XRE-family like proteins
DOJOIFCL_02109 8.8e-22 K Helix-turn-helix XRE-family like proteins
DOJOIFCL_02110 2.4e-07 S Pfam:DUF955
DOJOIFCL_02111 5.6e-08 M Host cell surface-exposed lipoprotein
DOJOIFCL_02112 6.2e-12
DOJOIFCL_02113 3.7e-93 sip L Belongs to the 'phage' integrase family
DOJOIFCL_02114 7e-43 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
DOJOIFCL_02115 6.6e-182 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
DOJOIFCL_02116 3.4e-284 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
DOJOIFCL_02117 0.0 uup S ABC transporter, ATP-binding protein
DOJOIFCL_02118 5.8e-112 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
DOJOIFCL_02119 5.4e-60 L Resolvase, N-terminal
DOJOIFCL_02120 5.5e-149 pepA E M42 glutamyl aminopeptidase
DOJOIFCL_02121 2.2e-311 ybiT S ABC transporter, ATP-binding protein
DOJOIFCL_02122 5.9e-174 S Aldo keto reductase
DOJOIFCL_02123 2.7e-138
DOJOIFCL_02124 2.8e-202 steT E amino acid
DOJOIFCL_02125 2.4e-26 steT E amino acid
DOJOIFCL_02126 8.6e-243 steT E amino acid
DOJOIFCL_02127 1.9e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
DOJOIFCL_02128 1.9e-147 glnH ET ABC transporter
DOJOIFCL_02129 1e-48 S Metal binding domain of Ada
DOJOIFCL_02130 0.0 mgtA 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
DOJOIFCL_02131 9e-137 lysR5 K LysR substrate binding domain
DOJOIFCL_02132 8.8e-234 arcA 3.5.3.6 E Arginine
DOJOIFCL_02133 4.3e-66 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DOJOIFCL_02134 1.9e-105 argF 2.1.3.3, 2.7.2.2 E Belongs to the carbamate kinase family
DOJOIFCL_02135 9.2e-95 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
DOJOIFCL_02136 2.3e-215 S Sterol carrier protein domain
DOJOIFCL_02137 1e-20
DOJOIFCL_02138 4.9e-108 K LysR substrate binding domain
DOJOIFCL_02139 9e-98
DOJOIFCL_02140 3e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)