ORF_ID e_value Gene_name EC_number CAZy COGs Description
GAFDNDEC_00003 3e-252 dtpT U amino acid peptide transporter
GAFDNDEC_00004 2e-151 yjjH S Calcineurin-like phosphoesterase
GAFDNDEC_00008 1.2e-49 5.3.3.19 S Cupin 2, conserved barrel domain protein
GAFDNDEC_00009 2.5e-53 S Cupin domain
GAFDNDEC_00010 1.1e-166 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
GAFDNDEC_00011 2e-192 ybiR P Citrate transporter
GAFDNDEC_00012 3.7e-151 pnuC H nicotinamide mononucleotide transporter
GAFDNDEC_00013 1.7e-137 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GAFDNDEC_00014 6.1e-221 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
GAFDNDEC_00015 2.3e-122 gntR1 K UbiC transcription regulator-associated domain protein
GAFDNDEC_00016 1.2e-137 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
GAFDNDEC_00017 5.2e-289 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GAFDNDEC_00018 1.4e-153 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
GAFDNDEC_00019 0.0 pacL 3.6.3.8 P P-type ATPase
GAFDNDEC_00020 8.9e-72
GAFDNDEC_00021 0.0 yhgF K Tex-like protein N-terminal domain protein
GAFDNDEC_00022 4.8e-81 ydcK S Belongs to the SprT family
GAFDNDEC_00023 4e-237 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
GAFDNDEC_00024 1.4e-156 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
GAFDNDEC_00026 4.8e-151 G Peptidase_C39 like family
GAFDNDEC_00027 1.5e-167 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
GAFDNDEC_00028 2.9e-132 manY G PTS system
GAFDNDEC_00029 4.4e-169 manN G system, mannose fructose sorbose family IID component
GAFDNDEC_00030 4.7e-64 S Domain of unknown function (DUF956)
GAFDNDEC_00031 0.0 levR K Sigma-54 interaction domain
GAFDNDEC_00032 8.6e-72 pts10A 2.7.1.191 G PTS system fructose IIA component
GAFDNDEC_00033 3.1e-87 pts10B 2.7.1.191, 2.7.1.202 G PTS system sorbose subfamily IIB component
GAFDNDEC_00034 4.6e-177 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GAFDNDEC_00035 9.7e-65 accB 2.3.1.12 I Biotin-requiring enzyme
GAFDNDEC_00036 1.2e-247 accC2 6.3.4.14, 6.4.1.2 I Biotin carboxylase C-terminal domain
GAFDNDEC_00037 9.8e-141 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
GAFDNDEC_00038 2e-135 accA 2.1.3.15, 6.4.1.2 I Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
GAFDNDEC_00039 4.1e-167 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GAFDNDEC_00040 3.3e-167 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
GAFDNDEC_00041 1.4e-176 EG EamA-like transporter family
GAFDNDEC_00042 9.5e-129 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GAFDNDEC_00043 5.2e-113 zmp2 O Zinc-dependent metalloprotease
GAFDNDEC_00044 7.3e-258 pepC 3.4.22.40 E Peptidase C1-like family
GAFDNDEC_00045 3.2e-124 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GAFDNDEC_00046 1.2e-51 HA62_12640 S GCN5-related N-acetyl-transferase
GAFDNDEC_00047 3.6e-99 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
GAFDNDEC_00048 1.3e-257 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GAFDNDEC_00049 3.7e-205 yacL S domain protein
GAFDNDEC_00050 8.9e-289 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GAFDNDEC_00051 2e-269 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
GAFDNDEC_00052 3.5e-70 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
GAFDNDEC_00053 3.3e-138 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GAFDNDEC_00054 5.3e-98 yacP S YacP-like NYN domain
GAFDNDEC_00055 6.9e-101 sigH K Sigma-70 region 2
GAFDNDEC_00056 6.5e-22 rpmG J Belongs to the bacterial ribosomal protein bL33 family
GAFDNDEC_00057 6.8e-29 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
GAFDNDEC_00058 3.7e-99 nusG K Participates in transcription elongation, termination and antitermination
GAFDNDEC_00059 2.6e-158 S Alpha/beta hydrolase of unknown function (DUF915)
GAFDNDEC_00060 2.4e-69 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GAFDNDEC_00061 5.1e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
GAFDNDEC_00062 4.6e-80 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GAFDNDEC_00063 9.9e-56 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
GAFDNDEC_00064 1.3e-176 F DNA/RNA non-specific endonuclease
GAFDNDEC_00065 1.5e-38 L nuclease
GAFDNDEC_00066 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
GAFDNDEC_00067 2.1e-108 yvdD 3.2.2.10 S Belongs to the LOG family
GAFDNDEC_00068 2.2e-198 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GAFDNDEC_00069 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GAFDNDEC_00070 6.5e-37 nrdH O Glutaredoxin
GAFDNDEC_00071 3.4e-109 rsmC 2.1.1.172 J Methyltransferase
GAFDNDEC_00072 5.9e-91 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
GAFDNDEC_00073 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GAFDNDEC_00074 5.8e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
GAFDNDEC_00075 7.4e-109 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GAFDNDEC_00076 2.2e-38 yaaL S Protein of unknown function (DUF2508)
GAFDNDEC_00077 3.3e-118 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GAFDNDEC_00078 2.4e-53 yaaQ S Cyclic-di-AMP receptor
GAFDNDEC_00079 3.3e-186 holB 2.7.7.7 L DNA polymerase III
GAFDNDEC_00080 1e-57 yabA L Involved in initiation control of chromosome replication
GAFDNDEC_00081 4.1e-164 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GAFDNDEC_00082 2.1e-148 fat 3.1.2.21 I Acyl-ACP thioesterase
GAFDNDEC_00083 4e-192 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
GAFDNDEC_00084 1.5e-211 phnW 2.5.1.49, 2.6.1.37, 3.11.1.1 E Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily
GAFDNDEC_00085 8.5e-145 phnX 2.6.1.37, 3.1.3.18, 3.11.1.1 E Belongs to the HAD-like hydrolase superfamily. PhnX family
GAFDNDEC_00086 2.6e-144 phnE1 3.6.1.63 U ABC transporter permease
GAFDNDEC_00087 2.9e-137 phnE 3.6.1.63 U Phosphonate ABC transporter permease
GAFDNDEC_00088 2.8e-137 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
GAFDNDEC_00089 3.3e-189 phnD P Phosphonate ABC transporter
GAFDNDEC_00090 1.7e-128 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
GAFDNDEC_00091 6.7e-101 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
GAFDNDEC_00092 1e-81 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
GAFDNDEC_00093 1.5e-194 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GAFDNDEC_00094 1.6e-306 uup S ABC transporter, ATP-binding protein
GAFDNDEC_00095 1.4e-119 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
GAFDNDEC_00096 1e-108 ydiL S CAAX protease self-immunity
GAFDNDEC_00097 1e-31 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GAFDNDEC_00098 8.5e-293 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
GAFDNDEC_00099 0.0 ydaO E amino acid
GAFDNDEC_00100 2.7e-181 tagO 2.7.8.33, 2.7.8.35 M transferase
GAFDNDEC_00101 1.6e-144 pstS P Phosphate
GAFDNDEC_00102 1.7e-114 yvyE 3.4.13.9 S YigZ family
GAFDNDEC_00103 1.4e-256 comFA L Helicase C-terminal domain protein
GAFDNDEC_00104 1.3e-116 comFC S Competence protein
GAFDNDEC_00105 3.5e-100 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GAFDNDEC_00106 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GAFDNDEC_00107 3.2e-203 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
GAFDNDEC_00108 1.2e-216 minJ O Domain present in PSD-95, Dlg, and ZO-1/2.
GAFDNDEC_00109 1.5e-132 K response regulator
GAFDNDEC_00110 1.1e-246 phoR 2.7.13.3 T Histidine kinase
GAFDNDEC_00111 1.1e-150 pstS P Phosphate
GAFDNDEC_00112 6.8e-162 pstC P probably responsible for the translocation of the substrate across the membrane
GAFDNDEC_00113 1.5e-155 pstA P Phosphate transport system permease protein PstA
GAFDNDEC_00114 1.1e-147 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GAFDNDEC_00115 1e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GAFDNDEC_00116 8.3e-117 phoU P Plays a role in the regulation of phosphate uptake
GAFDNDEC_00117 2e-49 pspC KT positive regulation of macromolecule biosynthetic process
GAFDNDEC_00118 9.2e-54 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
GAFDNDEC_00119 2.6e-175 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
GAFDNDEC_00120 2.3e-164 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GAFDNDEC_00121 8.5e-182 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
GAFDNDEC_00122 2.1e-171 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
GAFDNDEC_00123 4.1e-124 yliE T Putative diguanylate phosphodiesterase
GAFDNDEC_00124 6.7e-270 nox C NADH oxidase
GAFDNDEC_00125 3e-116 G Belongs to the glycosyl hydrolase 8 (cellulase D) family
GAFDNDEC_00126 1.2e-24 G Belongs to the glycosyl hydrolase 8 (cellulase D) family
GAFDNDEC_00127 4.6e-245
GAFDNDEC_00128 2.6e-195 S Protein conserved in bacteria
GAFDNDEC_00129 9.8e-217 ydaM M Glycosyl transferase family group 2
GAFDNDEC_00130 0.0 ydaN S Bacterial cellulose synthase subunit
GAFDNDEC_00131 5.7e-131 2.7.7.65 T diguanylate cyclase activity
GAFDNDEC_00132 6.4e-176 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
GAFDNDEC_00133 2e-109 yviA S Protein of unknown function (DUF421)
GAFDNDEC_00134 4.3e-61 S Protein of unknown function (DUF3290)
GAFDNDEC_00135 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
GAFDNDEC_00136 3.3e-132 yliE T Putative diguanylate phosphodiesterase
GAFDNDEC_00137 4e-259 nox S Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
GAFDNDEC_00138 1.1e-103 ddpX 3.4.13.22 E Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
GAFDNDEC_00139 9.9e-206 norA EGP Major facilitator Superfamily
GAFDNDEC_00140 6.1e-117 yfbR S HD containing hydrolase-like enzyme
GAFDNDEC_00141 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
GAFDNDEC_00142 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
GAFDNDEC_00143 6.7e-89 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
GAFDNDEC_00144 4.1e-231 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
GAFDNDEC_00145 2.5e-264 argH 4.3.2.1 E argininosuccinate lyase
GAFDNDEC_00146 9.3e-87 S Short repeat of unknown function (DUF308)
GAFDNDEC_00147 1.1e-161 rapZ S Displays ATPase and GTPase activities
GAFDNDEC_00148 2.9e-190 ybhK S Required for morphogenesis under gluconeogenic growth conditions
GAFDNDEC_00149 3.7e-168 whiA K May be required for sporulation
GAFDNDEC_00150 4e-306 oppA E ABC transporter, substratebinding protein
GAFDNDEC_00151 1e-176 1.1.1.26 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GAFDNDEC_00152 3e-102 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GAFDNDEC_00154 7.1e-245 rpoN K Sigma-54 factor, core binding domain
GAFDNDEC_00155 7.3e-189 cggR K Putative sugar-binding domain
GAFDNDEC_00156 2.6e-191 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
GAFDNDEC_00157 8.1e-224 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
GAFDNDEC_00158 1.2e-137 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GAFDNDEC_00159 1.6e-249 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GAFDNDEC_00160 1.1e-132
GAFDNDEC_00161 1.5e-294 clcA P chloride
GAFDNDEC_00162 1.2e-30 secG U Preprotein translocase
GAFDNDEC_00163 2.5e-138 est 3.1.1.1 S Serine aminopeptidase, S33
GAFDNDEC_00164 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
GAFDNDEC_00165 9.3e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
GAFDNDEC_00166 0.0 3.4.21.72 M Bacterial Ig-like domain (group 3)
GAFDNDEC_00167 0.0 3.4.21.72 M Bacterial Ig-like domain (group 3)
GAFDNDEC_00168 1.8e-254 glnP P ABC transporter
GAFDNDEC_00169 1.2e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GAFDNDEC_00170 6.1e-105 yxjI
GAFDNDEC_00171 4.4e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
GAFDNDEC_00172 1.6e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GAFDNDEC_00173 1.4e-178 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
GAFDNDEC_00174 5e-81 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
GAFDNDEC_00175 8.1e-88 2.3.1.128, 2.3.1.178 J Acetyltransferase (GNAT) domain
GAFDNDEC_00176 5.6e-100 dnaQ 2.7.7.7 L DNA polymerase III
GAFDNDEC_00177 5.6e-154 xth 3.1.11.2 L exodeoxyribonuclease III
GAFDNDEC_00178 3.9e-162 yceM 1.1.1.18, 1.1.1.369 S Oxidoreductase family, NAD-binding Rossmann fold
GAFDNDEC_00179 2.4e-167 murB 1.3.1.98 M Cell wall formation
GAFDNDEC_00180 0.0 yjcE P Sodium proton antiporter
GAFDNDEC_00181 1.3e-90 K helix_turn_helix multiple antibiotic resistance protein
GAFDNDEC_00182 7.1e-121 S Protein of unknown function (DUF1361)
GAFDNDEC_00183 2.7e-149 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
GAFDNDEC_00184 1.6e-129 ybbR S YbbR-like protein
GAFDNDEC_00185 1.6e-252 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GAFDNDEC_00186 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
GAFDNDEC_00187 4.5e-123 yliE T EAL domain
GAFDNDEC_00188 1.7e-145 3.1.3.23 S Sucrose-6F-phosphate phosphohydrolase
GAFDNDEC_00189 3.1e-104 K Bacterial regulatory proteins, tetR family
GAFDNDEC_00190 1.9e-36 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
GAFDNDEC_00191 1.2e-152 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
GAFDNDEC_00192 1.5e-52
GAFDNDEC_00193 3e-72
GAFDNDEC_00194 8.6e-131 1.5.1.39 C nitroreductase
GAFDNDEC_00195 1e-137 EGP Transmembrane secretion effector
GAFDNDEC_00196 7.3e-34 G Transmembrane secretion effector
GAFDNDEC_00197 2.8e-298 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
GAFDNDEC_00198 8.6e-142
GAFDNDEC_00200 9.6e-71 spxA 1.20.4.1 P ArsC family
GAFDNDEC_00201 1.5e-33
GAFDNDEC_00202 1.1e-89 V VanZ like family
GAFDNDEC_00203 3.9e-241 EGP Major facilitator Superfamily
GAFDNDEC_00204 7.2e-175 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
GAFDNDEC_00205 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
GAFDNDEC_00206 3.1e-289 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
GAFDNDEC_00207 5e-153 licD M LicD family
GAFDNDEC_00208 1.3e-82 K Transcriptional regulator
GAFDNDEC_00209 1.5e-19
GAFDNDEC_00210 1.2e-225 pbuG S permease
GAFDNDEC_00211 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
GAFDNDEC_00212 1.3e-154 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
GAFDNDEC_00213 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
GAFDNDEC_00214 5.4e-180 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
GAFDNDEC_00215 2e-180 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
GAFDNDEC_00216 0.0 oatA I Acyltransferase
GAFDNDEC_00217 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
GAFDNDEC_00218 5e-69 O OsmC-like protein
GAFDNDEC_00219 7.9e-48
GAFDNDEC_00220 8.2e-252 yfnA E Amino Acid
GAFDNDEC_00221 2.5e-88
GAFDNDEC_00222 1.9e-147 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
GAFDNDEC_00223 4.6e-73 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
GAFDNDEC_00224 1.8e-19
GAFDNDEC_00225 6.3e-105 gmk2 2.7.4.8 F Guanylate kinase
GAFDNDEC_00226 1.3e-81 zur P Belongs to the Fur family
GAFDNDEC_00227 7.1e-12 3.2.1.14 GH18
GAFDNDEC_00228 4.9e-148
GAFDNDEC_00229 8.8e-113 gph 3.1.3.18 S HAD hydrolase, family IA, variant
GAFDNDEC_00230 8.6e-210 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
GAFDNDEC_00231 7.3e-170 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GAFDNDEC_00232 1.4e-40
GAFDNDEC_00234 9e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GAFDNDEC_00235 7.8e-149 glnH ET ABC transporter substrate-binding protein
GAFDNDEC_00236 1.6e-109 gluC P ABC transporter permease
GAFDNDEC_00237 4e-108 glnP P ABC transporter permease
GAFDNDEC_00238 1.1e-83 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GAFDNDEC_00239 2.1e-154 K CAT RNA binding domain
GAFDNDEC_00240 1.8e-257 2.7.1.193, 2.7.1.211 G phosphotransferase system, EIIB
GAFDNDEC_00241 1.6e-140 G YdjC-like protein
GAFDNDEC_00242 7.1e-245 steT E amino acid
GAFDNDEC_00243 4.8e-73 mgrA K helix_turn_helix multiple antibiotic resistance protein
GAFDNDEC_00244 8.2e-149 XK27_00825 S Sulfite exporter TauE/SafE
GAFDNDEC_00245 2e-71 K MarR family
GAFDNDEC_00246 6.8e-35 EGP Major facilitator Superfamily
GAFDNDEC_00247 7.1e-164 EGP Major facilitator Superfamily
GAFDNDEC_00248 3.8e-85 S membrane transporter protein
GAFDNDEC_00249 7.1e-98 K Bacterial regulatory proteins, tetR family
GAFDNDEC_00250 8.7e-232 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GAFDNDEC_00251 9.9e-79 3.6.1.55 F NUDIX domain
GAFDNDEC_00252 2.9e-48 sugE U Multidrug resistance protein
GAFDNDEC_00253 1.2e-26
GAFDNDEC_00254 5.5e-129 pgm3 G Phosphoglycerate mutase family
GAFDNDEC_00255 1.4e-124 pgm3 G Phosphoglycerate mutase family
GAFDNDEC_00256 0.0 yjbQ P TrkA C-terminal domain protein
GAFDNDEC_00257 1.6e-177 yqkA 3.6.1.55 F Belongs to the Nudix hydrolase family
GAFDNDEC_00258 1.9e-158 bglG3 K CAT RNA binding domain
GAFDNDEC_00259 0.0 2.7.1.193, 2.7.1.211 G phosphotransferase system
GAFDNDEC_00260 5.1e-300 arbB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GAFDNDEC_00261 9.4e-110 dedA S SNARE associated Golgi protein
GAFDNDEC_00262 5.2e-71 mutT 3.6.1.55 F DNA mismatch repair protein MutT
GAFDNDEC_00263 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GAFDNDEC_00265 2.8e-213 bcr1 EGP Major facilitator Superfamily
GAFDNDEC_00266 6.6e-106 mutR K sequence-specific DNA binding
GAFDNDEC_00268 1.5e-146 tatD L hydrolase, TatD family
GAFDNDEC_00269 4.7e-97 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
GAFDNDEC_00270 8e-160 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
GAFDNDEC_00271 2e-36 veg S Biofilm formation stimulator VEG
GAFDNDEC_00272 2.2e-162 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
GAFDNDEC_00273 1.1e-180 S Prolyl oligopeptidase family
GAFDNDEC_00274 9.8e-129 fhuC 3.6.3.35 P ABC transporter
GAFDNDEC_00275 1.6e-130 znuB U ABC 3 transport family
GAFDNDEC_00276 6.7e-12 T Pre-toxin TG
GAFDNDEC_00277 4.9e-43 ankB S ankyrin repeats
GAFDNDEC_00278 2.1e-31
GAFDNDEC_00279 6.6e-148 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
GAFDNDEC_00280 4.6e-207 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GAFDNDEC_00281 1.1e-150 bla1 3.5.2.6 V Beta-lactamase enzyme family
GAFDNDEC_00282 1.2e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GAFDNDEC_00283 7.2e-181 S DUF218 domain
GAFDNDEC_00284 4.1e-125
GAFDNDEC_00285 1.4e-147 yxeH S hydrolase
GAFDNDEC_00286 1.7e-262 ywfO S HD domain protein
GAFDNDEC_00287 2.4e-153 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
GAFDNDEC_00288 3.8e-78 ywiB S Domain of unknown function (DUF1934)
GAFDNDEC_00289 4e-46 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
GAFDNDEC_00290 3.4e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
GAFDNDEC_00291 2.3e-245 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GAFDNDEC_00292 3.1e-229 tdcC E amino acid
GAFDNDEC_00293 9.8e-123 sdaAB 4.3.1.17 E Serine dehydratase beta chain
GAFDNDEC_00294 1.7e-157 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
GAFDNDEC_00295 6.4e-131 S YheO-like PAS domain
GAFDNDEC_00296 5.1e-27
GAFDNDEC_00297 3.6e-238 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GAFDNDEC_00298 5.1e-240 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
GAFDNDEC_00299 7.8e-41 rpmE2 J Ribosomal protein L31
GAFDNDEC_00300 3.2e-214 J translation release factor activity
GAFDNDEC_00301 9.2e-127 srtA 3.4.22.70 M sortase family
GAFDNDEC_00302 1.7e-91 lemA S LemA family
GAFDNDEC_00303 2.1e-139 htpX O Belongs to the peptidase M48B family
GAFDNDEC_00304 2e-146
GAFDNDEC_00305 1.6e-260 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
GAFDNDEC_00306 6.6e-258 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
GAFDNDEC_00307 1e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
GAFDNDEC_00308 1.7e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GAFDNDEC_00309 2.3e-63 ndoA L Toxic component of a toxin-antitoxin (TA) module
GAFDNDEC_00310 1.1e-181 kup P Transport of potassium into the cell
GAFDNDEC_00311 2.3e-173 kup P Transport of potassium into the cell
GAFDNDEC_00312 2.9e-193 P ABC transporter, substratebinding protein
GAFDNDEC_00313 1.7e-129 ssuC2 U Binding-protein-dependent transport system inner membrane component
GAFDNDEC_00314 1.5e-133 P ATPases associated with a variety of cellular activities
GAFDNDEC_00315 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
GAFDNDEC_00316 1.7e-204 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
GAFDNDEC_00317 9.4e-189 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
GAFDNDEC_00318 6.9e-231 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
GAFDNDEC_00319 8e-129 argB 2.7.2.8 F Belongs to the acetylglutamate kinase family. ArgB subfamily
GAFDNDEC_00320 2.7e-216 argD 2.6.1.11, 2.6.1.17 E acetylornithine
GAFDNDEC_00321 9.4e-189 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GAFDNDEC_00322 1.2e-83 S QueT transporter
GAFDNDEC_00323 1.3e-48 oppA2 E Bacterial extracellular solute-binding proteins, family 5 Middle
GAFDNDEC_00324 1.6e-117 oppA2 E Bacterial extracellular solute-binding proteins, family 5 Middle
GAFDNDEC_00325 2.1e-123 pepL 3.4.11.5 E Releases the N-terminal proline from various substrates
GAFDNDEC_00326 2.1e-114 S (CBS) domain
GAFDNDEC_00327 3.5e-263 S Putative peptidoglycan binding domain
GAFDNDEC_00328 3.5e-177 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
GAFDNDEC_00329 4.5e-100 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
GAFDNDEC_00330 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GAFDNDEC_00331 1.4e-287 yabM S Polysaccharide biosynthesis protein
GAFDNDEC_00332 2.2e-42 yabO J S4 domain protein
GAFDNDEC_00334 4.1e-63 divIC D Septum formation initiator
GAFDNDEC_00335 3.1e-74 yabR J RNA binding
GAFDNDEC_00336 1.4e-253 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
GAFDNDEC_00337 1.7e-96 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
GAFDNDEC_00338 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GAFDNDEC_00339 3.8e-162 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
GAFDNDEC_00340 1.1e-189 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GAFDNDEC_00341 3e-292 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
GAFDNDEC_00342 5.9e-33
GAFDNDEC_00343 3.1e-55 L Belongs to the 'phage' integrase family
GAFDNDEC_00344 4.2e-32 S YozE SAM-like fold
GAFDNDEC_00345 5.2e-95 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GAFDNDEC_00346 4e-80 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
GAFDNDEC_00347 1.7e-168 ppaC 3.6.1.1 C inorganic pyrophosphatase
GAFDNDEC_00348 1.2e-177 K Transcriptional regulator
GAFDNDEC_00349 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GAFDNDEC_00350 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GAFDNDEC_00351 5.2e-105 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
GAFDNDEC_00352 1.1e-169 lacX 5.1.3.3 G Aldose 1-epimerase
GAFDNDEC_00353 2.3e-257 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
GAFDNDEC_00354 6.7e-93 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
GAFDNDEC_00355 1.5e-177 xerC D Belongs to the 'phage' integrase family. XerC subfamily
GAFDNDEC_00356 2.5e-250 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
GAFDNDEC_00357 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GAFDNDEC_00358 1.2e-157 dprA LU DNA protecting protein DprA
GAFDNDEC_00359 1.3e-134 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GAFDNDEC_00360 8.2e-162 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
GAFDNDEC_00362 1.2e-227 XK27_05470 E Methionine synthase
GAFDNDEC_00363 3.6e-171 cpsY K Transcriptional regulator, LysR family
GAFDNDEC_00364 2.7e-174 L restriction endonuclease
GAFDNDEC_00365 7.2e-124 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
GAFDNDEC_00366 1.7e-196 XK27_00915 C Luciferase-like monooxygenase
GAFDNDEC_00367 1.5e-248 emrY EGP Major facilitator Superfamily
GAFDNDEC_00368 1e-260 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
GAFDNDEC_00369 3.4e-35 yozE S Belongs to the UPF0346 family
GAFDNDEC_00370 1.5e-112 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
GAFDNDEC_00371 9.4e-151 ypmR E GDSL-like Lipase/Acylhydrolase
GAFDNDEC_00372 5.1e-148 DegV S EDD domain protein, DegV family
GAFDNDEC_00373 5.1e-92 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
GAFDNDEC_00374 2.2e-187 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GAFDNDEC_00375 0.0 yfmR S ABC transporter, ATP-binding protein
GAFDNDEC_00376 9.6e-85
GAFDNDEC_00377 3.2e-228 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
GAFDNDEC_00378 5.4e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
GAFDNDEC_00379 4.3e-149 3.1.3.102, 3.1.3.104 S hydrolase
GAFDNDEC_00380 2.1e-206 S Tetratricopeptide repeat protein
GAFDNDEC_00381 1.1e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
GAFDNDEC_00382 1.8e-248 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
GAFDNDEC_00383 4e-213 rpsA 1.17.7.4 J Ribosomal protein S1
GAFDNDEC_00384 3.8e-117 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
GAFDNDEC_00385 2e-19 M Lysin motif
GAFDNDEC_00386 1.9e-267 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
GAFDNDEC_00387 2.4e-192 ypbB 5.1.3.1 S Helix-turn-helix domain
GAFDNDEC_00388 4.1e-96 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GAFDNDEC_00389 1.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GAFDNDEC_00390 7.9e-103 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GAFDNDEC_00391 2.2e-129 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
GAFDNDEC_00392 4.8e-69 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
GAFDNDEC_00393 1.1e-164 xerD D recombinase XerD
GAFDNDEC_00394 2.9e-170 cvfB S S1 domain
GAFDNDEC_00395 1.5e-74 yeaL S Protein of unknown function (DUF441)
GAFDNDEC_00396 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
GAFDNDEC_00397 1.5e-180 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
GAFDNDEC_00398 0.0 dnaE 2.7.7.7 L DNA polymerase
GAFDNDEC_00399 5.6e-29 S Protein of unknown function (DUF2929)
GAFDNDEC_00401 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GAFDNDEC_00402 1.4e-234 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
GAFDNDEC_00403 3.2e-197 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
GAFDNDEC_00404 1.6e-126 trmK 2.1.1.217 S SAM-dependent methyltransferase
GAFDNDEC_00405 3.8e-221 M O-Antigen ligase
GAFDNDEC_00406 5.4e-120 drrB U ABC-2 type transporter
GAFDNDEC_00407 4.3e-164 drrA V ABC transporter
GAFDNDEC_00408 3.1e-84 K helix_turn_helix multiple antibiotic resistance protein
GAFDNDEC_00409 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
GAFDNDEC_00410 5.4e-62 P Rhodanese Homology Domain
GAFDNDEC_00411 2.1e-91 yetL K helix_turn_helix multiple antibiotic resistance protein
GAFDNDEC_00412 8.6e-207
GAFDNDEC_00413 8.5e-220 I transferase activity, transferring acyl groups other than amino-acyl groups
GAFDNDEC_00414 1.3e-179 C Zinc-binding dehydrogenase
GAFDNDEC_00415 0.0 3.6.3.6 P Cation transporter/ATPase, N-terminus
GAFDNDEC_00416 4e-245 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GAFDNDEC_00417 1.7e-281 gadB 4.1.1.15 E Belongs to the group II decarboxylase family
GAFDNDEC_00418 1.8e-27
GAFDNDEC_00419 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
GAFDNDEC_00420 2.4e-116 luxT K Bacterial regulatory proteins, tetR family
GAFDNDEC_00421 3.5e-88 K Winged helix DNA-binding domain
GAFDNDEC_00422 2.5e-135 T Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
GAFDNDEC_00423 1.7e-129 S WxL domain surface cell wall-binding
GAFDNDEC_00424 2.9e-185 S Bacterial protein of unknown function (DUF916)
GAFDNDEC_00425 0.0
GAFDNDEC_00426 2.3e-160 ypuA S Protein of unknown function (DUF1002)
GAFDNDEC_00427 5.5e-50 yvlA
GAFDNDEC_00428 4.4e-95 K transcriptional regulator
GAFDNDEC_00429 1.3e-90 ymdB S Macro domain protein
GAFDNDEC_00430 1.5e-147 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
GAFDNDEC_00431 2.3e-43 S Protein of unknown function (DUF1093)
GAFDNDEC_00432 2e-77 S Threonine/Serine exporter, ThrE
GAFDNDEC_00433 9.2e-133 thrE S Putative threonine/serine exporter
GAFDNDEC_00434 4.4e-163 yvgN C Aldo keto reductase
GAFDNDEC_00435 3.8e-152 ywkB S Membrane transport protein
GAFDNDEC_00436 8.6e-311 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
GAFDNDEC_00437 0.0 pacL3 3.6.3.8 P Cation transporter/ATPase, N-terminus
GAFDNDEC_00438 1.3e-84 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
GAFDNDEC_00439 3.1e-78 M1-874 K Domain of unknown function (DUF1836)
GAFDNDEC_00440 2e-180 D Alpha beta
GAFDNDEC_00441 1.1e-212 mdtG EGP Major facilitator Superfamily
GAFDNDEC_00442 4e-251 U Belongs to the purine-cytosine permease (2.A.39) family
GAFDNDEC_00443 7.1e-65 ycgX S Protein of unknown function (DUF1398)
GAFDNDEC_00444 4.2e-49
GAFDNDEC_00445 1.7e-24
GAFDNDEC_00446 1.5e-248 lmrB EGP Major facilitator Superfamily
GAFDNDEC_00447 7.7e-73 S COG NOG18757 non supervised orthologous group
GAFDNDEC_00448 7.4e-40
GAFDNDEC_00449 4.7e-73 copR K Copper transport repressor CopY TcrY
GAFDNDEC_00450 0.0 copB 3.6.3.4 P P-type ATPase
GAFDNDEC_00451 1.3e-190 pva2 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
GAFDNDEC_00452 6.8e-111 S VIT family
GAFDNDEC_00453 1.8e-119 S membrane
GAFDNDEC_00454 7.7e-158 EG EamA-like transporter family
GAFDNDEC_00455 1.3e-81 elaA S GNAT family
GAFDNDEC_00456 1.1e-115 GM NmrA-like family
GAFDNDEC_00457 2.1e-14
GAFDNDEC_00458 7e-56
GAFDNDEC_00459 1.2e-79 hsp3 O Belongs to the small heat shock protein (HSP20) family
GAFDNDEC_00460 4.3e-86
GAFDNDEC_00461 1.9e-62
GAFDNDEC_00462 4.1e-214 mutY L A G-specific adenine glycosylase
GAFDNDEC_00463 4e-53
GAFDNDEC_00464 1.7e-66 yeaO S Protein of unknown function, DUF488
GAFDNDEC_00465 7e-71 spx4 1.20.4.1 P ArsC family
GAFDNDEC_00466 4.1e-66 K Winged helix DNA-binding domain
GAFDNDEC_00467 4.1e-161 azoB GM NmrA-like family
GAFDNDEC_00468 7.3e-86 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
GAFDNDEC_00469 3e-167 S Alpha/beta hydrolase of unknown function (DUF915)
GAFDNDEC_00470 1.2e-48 cycA E Amino acid permease
GAFDNDEC_00471 2.2e-188 cycA E Amino acid permease
GAFDNDEC_00472 2.6e-253 nhaC C Na H antiporter NhaC
GAFDNDEC_00473 8e-27 3.2.2.10 S Belongs to the LOG family
GAFDNDEC_00474 2.8e-199 frlB M SIS domain
GAFDNDEC_00475 0.0 ade 3.5.4.2 F Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
GAFDNDEC_00476 1.8e-220 S Uncharacterized protein conserved in bacteria (DUF2325)
GAFDNDEC_00477 4.8e-125 yyaQ S YjbR
GAFDNDEC_00479 0.0 cadA P P-type ATPase
GAFDNDEC_00480 1.1e-306 U Belongs to the BCCT transporter (TC 2.A.15) family
GAFDNDEC_00481 2e-120 E GDSL-like Lipase/Acylhydrolase family
GAFDNDEC_00482 1.4e-77
GAFDNDEC_00483 6.6e-27 S Bacteriocin-protection, YdeI or OmpD-Associated
GAFDNDEC_00484 3.3e-97 FG HIT domain
GAFDNDEC_00485 7.7e-174 S Aldo keto reductase
GAFDNDEC_00486 5.1e-53 yitW S Pfam:DUF59
GAFDNDEC_00487 6.7e-161 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GAFDNDEC_00488 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
GAFDNDEC_00489 5e-195 blaA6 V Beta-lactamase
GAFDNDEC_00490 4e-95 V VanZ like family
GAFDNDEC_00491 2.5e-189 S Cell surface protein
GAFDNDEC_00492 1.2e-61
GAFDNDEC_00493 1.5e-259
GAFDNDEC_00494 3.5e-169 XK27_00670 S ABC transporter
GAFDNDEC_00495 3.3e-154 WQ51_06230 U Belongs to the binding-protein-dependent transport system permease family
GAFDNDEC_00496 2.9e-117 cmpC S ATPases associated with a variety of cellular activities
GAFDNDEC_00497 0.0 nagE 2.7.1.193, 2.7.1.199, 2.7.1.211 G phosphotransferase system, EIIB
GAFDNDEC_00498 1.3e-119 drgA C Nitroreductase family
GAFDNDEC_00499 1.1e-95 rmaB K Transcriptional regulator, MarR family
GAFDNDEC_00500 0.0 lmrA 3.6.3.44 V ABC transporter
GAFDNDEC_00501 5.6e-89
GAFDNDEC_00502 1.2e-80 ybfG M peptidoglycan-binding domain-containing protein
GAFDNDEC_00503 6.2e-307 ybfG M peptidoglycan-binding domain-containing protein
GAFDNDEC_00505 4.2e-161 ypbG 2.7.1.2 GK ROK family
GAFDNDEC_00506 2.4e-47 3.6.4.12 K HxlR-like helix-turn-helix
GAFDNDEC_00507 3.5e-114 K Transcriptional regulator C-terminal region
GAFDNDEC_00508 2e-177 4.1.1.52 S Amidohydrolase
GAFDNDEC_00509 4.4e-129 E lipolytic protein G-D-S-L family
GAFDNDEC_00510 2.6e-158 yicL EG EamA-like transporter family
GAFDNDEC_00511 4.6e-223 sdrF M Collagen binding domain
GAFDNDEC_00512 1.3e-268 I acetylesterase activity
GAFDNDEC_00513 2.6e-176 S Phosphotransferase system, EIIC
GAFDNDEC_00514 1.1e-133 aroD S Alpha/beta hydrolase family
GAFDNDEC_00515 3.2e-37
GAFDNDEC_00517 2.8e-134 S zinc-ribbon domain
GAFDNDEC_00518 7.4e-264 S response to antibiotic
GAFDNDEC_00519 1.4e-286 ubiD 4.1.1.98 H 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
GAFDNDEC_00520 5.2e-243 P Sodium:sulfate symporter transmembrane region
GAFDNDEC_00521 2.4e-164 K LysR substrate binding domain
GAFDNDEC_00522 2.5e-74
GAFDNDEC_00523 2.4e-21
GAFDNDEC_00524 1.5e-191 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GAFDNDEC_00525 2.6e-191 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GAFDNDEC_00526 4.5e-73 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
GAFDNDEC_00527 2e-80
GAFDNDEC_00528 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
GAFDNDEC_00529 2.2e-104 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GAFDNDEC_00530 3.1e-127 yliE T EAL domain
GAFDNDEC_00531 4.9e-152 2.7.7.65 T Diguanylate cyclase, GGDEF domain
GAFDNDEC_00532 7.5e-89 pts21A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GAFDNDEC_00533 5.6e-39 S Cytochrome B5
GAFDNDEC_00534 1.5e-234
GAFDNDEC_00535 1.8e-130 treR K UTRA
GAFDNDEC_00536 7.7e-157 I alpha/beta hydrolase fold
GAFDNDEC_00537 8.1e-254 npp S type I phosphodiesterase nucleotide pyrophosphatase
GAFDNDEC_00538 1.7e-232 yxiO S Vacuole effluxer Atg22 like
GAFDNDEC_00539 9.8e-250 puuP_1 E Amino acid permease
GAFDNDEC_00540 4.7e-176 pepR1 3.4.11.5 I Releases the N-terminal proline from various substrates
GAFDNDEC_00541 7.6e-174 ropB K Helix-turn-helix XRE-family like proteins
GAFDNDEC_00542 5.7e-209 EGP Major facilitator Superfamily
GAFDNDEC_00543 0.0 uvrA3 L excinuclease ABC
GAFDNDEC_00544 0.0 S Predicted membrane protein (DUF2207)
GAFDNDEC_00545 1.1e-147 3.1.3.102, 3.1.3.104 S hydrolase
GAFDNDEC_00546 1.6e-307 ybiT S ABC transporter, ATP-binding protein
GAFDNDEC_00547 9.9e-222 S CAAX protease self-immunity
GAFDNDEC_00548 1.6e-61 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GAFDNDEC_00549 1.7e-30
GAFDNDEC_00550 5.3e-56
GAFDNDEC_00551 6.9e-98 dut S Protein conserved in bacteria
GAFDNDEC_00552 4e-181
GAFDNDEC_00553 2.5e-161
GAFDNDEC_00554 6.2e-265 glnA 6.3.1.2 E glutamine synthetase
GAFDNDEC_00555 4.6e-64 glnR K Transcriptional regulator
GAFDNDEC_00556 2.4e-175 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GAFDNDEC_00557 5.8e-140 glpQ 3.1.4.46 C phosphodiesterase
GAFDNDEC_00558 6.9e-23 WQ51_02665 S Protein of unknown function (DUF3042)
GAFDNDEC_00559 4.4e-68 yqhL P Rhodanese-like protein
GAFDNDEC_00560 6.4e-111 pepE 3.4.13.21 E Belongs to the peptidase S51 family
GAFDNDEC_00561 5.7e-180 glk 2.7.1.2 G Glucokinase
GAFDNDEC_00562 1.4e-33 yqgQ S Bacterial protein of unknown function (DUF910)
GAFDNDEC_00563 1.3e-114 gluP 3.4.21.105 S Peptidase, S54 family
GAFDNDEC_00564 1.4e-101 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
GAFDNDEC_00565 1.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
GAFDNDEC_00566 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
GAFDNDEC_00567 0.0 S membrane
GAFDNDEC_00568 1.5e-54 yneR S Belongs to the HesB IscA family
GAFDNDEC_00569 4e-75 XK27_02470 K LytTr DNA-binding domain
GAFDNDEC_00570 2.3e-96 liaI S membrane
GAFDNDEC_00571 6.8e-81 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GAFDNDEC_00572 2.6e-112 udk 2.7.1.48 F Cytidine monophosphokinase
GAFDNDEC_00573 6.6e-186 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GAFDNDEC_00574 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GAFDNDEC_00575 5.4e-200 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GAFDNDEC_00576 7.4e-64 yodB K Transcriptional regulator, HxlR family
GAFDNDEC_00577 1.3e-93 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
GAFDNDEC_00578 7.9e-140 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GAFDNDEC_00579 6.4e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
GAFDNDEC_00580 1e-162 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GAFDNDEC_00581 8.4e-94 S SdpI/YhfL protein family
GAFDNDEC_00582 1.3e-226 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
GAFDNDEC_00583 0.0 sbcC L Putative exonuclease SbcCD, C subunit
GAFDNDEC_00584 5.8e-172 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
GAFDNDEC_00585 3e-306 arlS 2.7.13.3 T Histidine kinase
GAFDNDEC_00586 4.3e-121 K response regulator
GAFDNDEC_00587 1.6e-244 rarA L recombination factor protein RarA
GAFDNDEC_00588 1e-273 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GAFDNDEC_00589 1.2e-166 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GAFDNDEC_00590 6.3e-89 S Peptidase propeptide and YPEB domain
GAFDNDEC_00591 1.6e-97 yceD S Uncharacterized ACR, COG1399
GAFDNDEC_00592 3.7e-218 ylbM S Belongs to the UPF0348 family
GAFDNDEC_00593 1.1e-138 yqeM Q Methyltransferase
GAFDNDEC_00594 2.1e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
GAFDNDEC_00595 9.3e-115 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
GAFDNDEC_00596 1.4e-118 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GAFDNDEC_00597 1.1e-50 yhbY J RNA-binding protein
GAFDNDEC_00598 5e-215 yqeH S Ribosome biogenesis GTPase YqeH
GAFDNDEC_00599 1.4e-98 yqeG S HAD phosphatase, family IIIA
GAFDNDEC_00600 1.3e-79
GAFDNDEC_00601 1.8e-248 pgaC GT2 M Glycosyl transferase
GAFDNDEC_00602 1.5e-135 racD 5.1.1.13 G Belongs to the aspartate glutamate racemases family
GAFDNDEC_00603 1e-62 hxlR K Transcriptional regulator, HxlR family
GAFDNDEC_00604 1.1e-197 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
GAFDNDEC_00605 3.6e-238 yrvN L AAA C-terminal domain
GAFDNDEC_00606 9.9e-57
GAFDNDEC_00607 7.3e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GAFDNDEC_00608 1.9e-26 rpmI J Belongs to the bacterial ribosomal protein bL35 family
GAFDNDEC_00609 1.8e-84 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GAFDNDEC_00610 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GAFDNDEC_00611 3.3e-172 dnaI L Primosomal protein DnaI
GAFDNDEC_00612 5.5e-248 dnaB L replication initiation and membrane attachment
GAFDNDEC_00613 4.6e-91 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GAFDNDEC_00614 2.7e-103 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GAFDNDEC_00615 2.9e-156 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
GAFDNDEC_00616 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GAFDNDEC_00617 4.5e-121 ybhL S Belongs to the BI1 family
GAFDNDEC_00618 5.6e-35 pflC 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GAFDNDEC_00619 2.3e-181 bglK_1 GK ROK family
GAFDNDEC_00620 2.9e-151 glcU U sugar transport
GAFDNDEC_00621 1.1e-148 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GAFDNDEC_00622 3.1e-178 iunH2 3.2.2.1 F nucleoside hydrolase
GAFDNDEC_00623 7.1e-98 drgA C Nitroreductase family
GAFDNDEC_00624 5.1e-167 S Polyphosphate kinase 2 (PPK2)
GAFDNDEC_00625 9.9e-183 3.6.4.13 S domain, Protein
GAFDNDEC_00626 9.9e-73 S Alpha/beta hydrolase of unknown function (DUF915)
GAFDNDEC_00627 6.4e-57 S Alpha/beta hydrolase of unknown function (DUF915)
GAFDNDEC_00628 1.2e-183 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
GAFDNDEC_00629 0.0 glpQ 3.1.4.46 C phosphodiesterase
GAFDNDEC_00630 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GAFDNDEC_00631 3.9e-75 yjcF S Acetyltransferase (GNAT) domain
GAFDNDEC_00632 1.3e-274 M domain protein
GAFDNDEC_00633 0.0 ydgH S MMPL family
GAFDNDEC_00634 3.2e-112 S Protein of unknown function (DUF1211)
GAFDNDEC_00635 3.7e-34
GAFDNDEC_00636 5.9e-185 pva3 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GAFDNDEC_00637 8e-199 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GAFDNDEC_00638 3.5e-13 rmeB K transcriptional regulator, MerR family
GAFDNDEC_00639 3.4e-50 S Domain of unknown function (DU1801)
GAFDNDEC_00640 1.7e-165 corA P CorA-like Mg2+ transporter protein
GAFDNDEC_00641 8.7e-215 ysaA V RDD family
GAFDNDEC_00642 2.2e-164 hisK 3.1.3.15 E Histidinol phosphate phosphatase, HisJ
GAFDNDEC_00643 1.3e-215 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
GAFDNDEC_00644 4.3e-118 hisG 2.4.2.17 F Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
GAFDNDEC_00645 1.2e-233 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
GAFDNDEC_00646 7.9e-108 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
GAFDNDEC_00647 1.2e-109 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
GAFDNDEC_00648 2.2e-128 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
GAFDNDEC_00649 2.2e-134 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
GAFDNDEC_00650 3.8e-59 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
GAFDNDEC_00651 7.6e-52 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
GAFDNDEC_00652 5.9e-202 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
GAFDNDEC_00653 2.4e-85 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
GAFDNDEC_00654 3.1e-136 terC P membrane
GAFDNDEC_00655 1.5e-158 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
GAFDNDEC_00656 9.7e-258 npr 1.11.1.1 C NADH oxidase
GAFDNDEC_00657 2.6e-138 XK27_08845 S ABC transporter, ATP-binding protein
GAFDNDEC_00658 8.7e-154 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
GAFDNDEC_00659 3.1e-176 XK27_08835 S ABC transporter
GAFDNDEC_00660 2.1e-165 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
GAFDNDEC_00661 3.4e-244 metY 2.5.1.49 E Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
GAFDNDEC_00662 4.3e-231 hom1 1.1.1.3 E Homoserine dehydrogenase
GAFDNDEC_00663 2.5e-161 degV S Uncharacterised protein, DegV family COG1307
GAFDNDEC_00664 1.4e-189 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GAFDNDEC_00665 0.0 nagE 2.7.1.193, 2.7.1.199, 2.7.1.211 G phosphotransferase system, EIIB
GAFDNDEC_00666 1e-38
GAFDNDEC_00667 1.7e-81 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GAFDNDEC_00668 2e-106 3.2.2.20 K acetyltransferase
GAFDNDEC_00669 3e-295 S ABC transporter, ATP-binding protein
GAFDNDEC_00670 6.6e-218 2.7.7.65 T diguanylate cyclase
GAFDNDEC_00671 3.3e-33
GAFDNDEC_00672 2e-35
GAFDNDEC_00673 8.6e-81 K AsnC family
GAFDNDEC_00674 1.3e-170 ykfC 3.4.14.13 M NlpC/P60 family
GAFDNDEC_00675 1.2e-160 S Alpha/beta hydrolase of unknown function (DUF915)
GAFDNDEC_00677 3.8e-23
GAFDNDEC_00678 1.9e-138 3.6.1.13, 3.6.1.55 F NUDIX domain
GAFDNDEC_00679 9.8e-214 yceI EGP Major facilitator Superfamily
GAFDNDEC_00680 8.6e-48
GAFDNDEC_00681 7.7e-92 S ECF-type riboflavin transporter, S component
GAFDNDEC_00682 6.2e-111 C Aldo/keto reductase family
GAFDNDEC_00683 1.9e-102 M Protein of unknown function (DUF3737)
GAFDNDEC_00684 2.4e-220 patB 4.4.1.8 E Aminotransferase, class I
GAFDNDEC_00685 3.9e-102 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
GAFDNDEC_00686 1.5e-81
GAFDNDEC_00687 2.4e-124 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GAFDNDEC_00688 5.8e-95 maa 2.3.1.18, 2.3.1.79 S Maltose O-acetyltransferase
GAFDNDEC_00689 6.1e-76 T Belongs to the universal stress protein A family
GAFDNDEC_00690 4.9e-34
GAFDNDEC_00691 1.6e-149 IQ Enoyl-(Acyl carrier protein) reductase
GAFDNDEC_00692 2.3e-195 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
GAFDNDEC_00693 1.2e-103 GM NAD(P)H-binding
GAFDNDEC_00694 1.9e-158 K LysR substrate binding domain
GAFDNDEC_00695 1.3e-63 S Domain of unknown function (DUF4440)
GAFDNDEC_00696 4.2e-110 pgm8 G Histidine phosphatase superfamily (branch 1)
GAFDNDEC_00697 8.2e-48
GAFDNDEC_00698 3.2e-37
GAFDNDEC_00699 5e-87 yvbK 3.1.3.25 K GNAT family
GAFDNDEC_00700 1.1e-83
GAFDNDEC_00701 2.2e-111 lepB 3.4.21.89 U Belongs to the peptidase S26 family
GAFDNDEC_00702 1.9e-115 lepB 3.4.21.89 U Belongs to the peptidase S26 family
GAFDNDEC_00703 2.2e-100 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
GAFDNDEC_00704 8e-117 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GAFDNDEC_00706 1.9e-119 macB V ABC transporter, ATP-binding protein
GAFDNDEC_00707 0.0 ylbB V ABC transporter permease
GAFDNDEC_00708 5.7e-236 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
GAFDNDEC_00709 4.4e-79 K transcriptional regulator, MerR family
GAFDNDEC_00710 3.2e-76 yphH S Cupin domain
GAFDNDEC_00711 2.5e-55 yphJ 4.1.1.44 S Carboxymuconolactone decarboxylase family
GAFDNDEC_00712 1e-128 S Belongs to the short-chain dehydrogenases reductases (SDR) family
GAFDNDEC_00713 4.7e-211 natB CP ABC-2 family transporter protein
GAFDNDEC_00714 3.6e-168 natA S ABC transporter, ATP-binding protein
GAFDNDEC_00715 5.2e-92 ogt 2.1.1.63 L Methyltransferase
GAFDNDEC_00716 1.3e-52 lytE M LysM domain
GAFDNDEC_00718 2.9e-266 tagE6 2.4.1.52 GT4 M Glycosyl transferases group 1
GAFDNDEC_00719 2.6e-296 tagE5 2.4.1.52 GT4 M Poly(Glycerol-phosphate) alpha-glucosyltransferase
GAFDNDEC_00720 3.7e-151 rlrG K Transcriptional regulator
GAFDNDEC_00721 9.3e-173 S Conserved hypothetical protein 698
GAFDNDEC_00722 8.1e-102 rimL J Acetyltransferase (GNAT) domain
GAFDNDEC_00723 4e-76 S Domain of unknown function (DUF4811)
GAFDNDEC_00724 6e-269 lmrB EGP Major facilitator Superfamily
GAFDNDEC_00725 2.2e-122 hadL 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GAFDNDEC_00726 7.6e-190 ynfM EGP Major facilitator Superfamily
GAFDNDEC_00727 3.2e-256 aspA 4.2.1.2, 4.3.1.1 E Fumarase C C-terminus
GAFDNDEC_00728 1.2e-155 mleP3 S Membrane transport protein
GAFDNDEC_00729 7.5e-118 S Membrane
GAFDNDEC_00730 1.8e-188 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
GAFDNDEC_00731 8.1e-99 1.5.1.3 H RibD C-terminal domain
GAFDNDEC_00732 4.2e-186 iunH 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
GAFDNDEC_00733 3.7e-91 2.7.7.65 T phosphorelay sensor kinase activity
GAFDNDEC_00734 2.8e-120 devA 3.6.3.25 V ABC transporter, ATP-binding protein
GAFDNDEC_00735 8.9e-174 hrtB V ABC transporter permease
GAFDNDEC_00736 6.6e-95 S Protein of unknown function (DUF1440)
GAFDNDEC_00737 1.7e-227 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
GAFDNDEC_00738 5.8e-149 KT helix_turn_helix, mercury resistance
GAFDNDEC_00739 1.6e-115 S Protein of unknown function (DUF554)
GAFDNDEC_00740 1.1e-92 yueI S Protein of unknown function (DUF1694)
GAFDNDEC_00741 7.7e-143 yvpB S Peptidase_C39 like family
GAFDNDEC_00742 1.8e-152 M Glycosyl hydrolases family 25
GAFDNDEC_00743 1.1e-110
GAFDNDEC_00744 1.7e-240 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GAFDNDEC_00745 1.8e-84 hmpT S Pfam:DUF3816
GAFDNDEC_00746 1.4e-158 dkgB S reductase
GAFDNDEC_00747 1.4e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GAFDNDEC_00748 1e-69
GAFDNDEC_00749 7.4e-132 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GAFDNDEC_00751 2.6e-277 pipD E Dipeptidase
GAFDNDEC_00752 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
GAFDNDEC_00753 0.0 mtlR K Mga helix-turn-helix domain
GAFDNDEC_00754 1.7e-78 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GAFDNDEC_00755 9.5e-222 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
GAFDNDEC_00756 1.7e-75
GAFDNDEC_00757 6.2e-57 trxA1 O Belongs to the thioredoxin family
GAFDNDEC_00758 4.7e-49
GAFDNDEC_00759 6.6e-96
GAFDNDEC_00760 2e-62
GAFDNDEC_00761 3.9e-81 ndk 2.7.4.6 F Belongs to the NDK family
GAFDNDEC_00762 7.6e-255 S Uncharacterized protein conserved in bacteria (DUF2252)
GAFDNDEC_00763 5.4e-98 yieF S NADPH-dependent FMN reductase
GAFDNDEC_00764 3.6e-123 K helix_turn_helix gluconate operon transcriptional repressor
GAFDNDEC_00765 5.1e-229 pts3C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GAFDNDEC_00766 4.7e-39
GAFDNDEC_00767 1.4e-211 S Bacterial protein of unknown function (DUF871)
GAFDNDEC_00768 3e-212 dho 3.5.2.3 S Amidohydrolase family
GAFDNDEC_00769 5.2e-201 selA 2.9.1.1 H L-seryl-tRNA selenium transferase
GAFDNDEC_00770 4.6e-129 4.1.2.14 S KDGP aldolase
GAFDNDEC_00771 8.5e-190 kdgK 2.7.1.45 G pfkB family carbohydrate kinase
GAFDNDEC_00772 1.2e-94 cysE 2.3.1.30 E Bacterial transferase hexapeptide (six repeats)
GAFDNDEC_00773 1.3e-210 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
GAFDNDEC_00774 1.1e-164 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
GAFDNDEC_00775 7.8e-159 map 3.4.11.18 E Methionine Aminopeptidase
GAFDNDEC_00776 4.3e-141 pnuC H nicotinamide mononucleotide transporter
GAFDNDEC_00777 7.3e-43 S Protein of unknown function (DUF2089)
GAFDNDEC_00778 2.2e-42
GAFDNDEC_00779 4.5e-129 treR K UTRA
GAFDNDEC_00780 0.0 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
GAFDNDEC_00781 0.0 treB 2.7.1.193, 2.7.1.211 G phosphotransferase system
GAFDNDEC_00782 0.0 pts4ABC 2.7.1.193, 2.7.1.211 G phosphotransferase system, EIIB
GAFDNDEC_00783 1.4e-144
GAFDNDEC_00784 6.3e-100 ubiX 2.5.1.129 H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
GAFDNDEC_00785 3.5e-70
GAFDNDEC_00786 1.8e-72 K Transcriptional regulator
GAFDNDEC_00787 4.3e-121 K Bacterial regulatory proteins, tetR family
GAFDNDEC_00788 8.5e-233 mntH P H( )-stimulated, divalent metal cation uptake system
GAFDNDEC_00789 4.7e-117
GAFDNDEC_00790 5.2e-42
GAFDNDEC_00791 1e-40
GAFDNDEC_00792 4.8e-252 ydiC1 EGP Major facilitator Superfamily
GAFDNDEC_00793 8.1e-64 K helix_turn_helix, mercury resistance
GAFDNDEC_00794 9.8e-250 T PhoQ Sensor
GAFDNDEC_00795 1.3e-128 K Transcriptional regulatory protein, C terminal
GAFDNDEC_00796 1.8e-49
GAFDNDEC_00797 2.1e-129 yidA K Helix-turn-helix domain, rpiR family
GAFDNDEC_00798 3e-243 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GAFDNDEC_00799 1.1e-55
GAFDNDEC_00800 1.1e-40
GAFDNDEC_00801 7e-184 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GAFDNDEC_00802 2.6e-258 loxD 1.1.3.15 C FAD linked oxidases, C-terminal domain
GAFDNDEC_00803 1.3e-47
GAFDNDEC_00804 2.7e-123 2.7.6.5 S RelA SpoT domain protein
GAFDNDEC_00805 3.1e-104 K transcriptional regulator
GAFDNDEC_00806 0.0 ydgH S MMPL family
GAFDNDEC_00807 1e-107 tag 3.2.2.20 L glycosylase
GAFDNDEC_00808 9.1e-92 XK27_00720 S Leucine-rich repeat (LRR) protein
GAFDNDEC_00809 4.4e-175 galR K Transcriptional regulator
GAFDNDEC_00810 2.2e-198 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
GAFDNDEC_00811 0.0 lacS G Transporter
GAFDNDEC_00812 0.0 rafA 3.2.1.22 G alpha-galactosidase
GAFDNDEC_00813 8.3e-187 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
GAFDNDEC_00814 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
GAFDNDEC_00815 4.6e-224 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
GAFDNDEC_00816 3.1e-192 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
GAFDNDEC_00817 1.3e-284 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
GAFDNDEC_00818 1.6e-180 galR K Transcriptional regulator
GAFDNDEC_00819 6.8e-75 K Helix-turn-helix XRE-family like proteins
GAFDNDEC_00820 2.4e-22 fic D Fic/DOC family
GAFDNDEC_00821 1.9e-25 fic D Fic/DOC family
GAFDNDEC_00822 2.1e-38 fic D Fic/DOC family
GAFDNDEC_00823 7.4e-183 rhaR K helix_turn_helix, arabinose operon control protein
GAFDNDEC_00824 8.6e-232 EGP Major facilitator Superfamily
GAFDNDEC_00825 3.9e-303 ram2 3.2.1.40 G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
GAFDNDEC_00826 1.5e-228 mdtH P Sugar (and other) transporter
GAFDNDEC_00827 1.3e-215 3.2.1.40 G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
GAFDNDEC_00828 3.4e-171 3.2.1.40 G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
GAFDNDEC_00829 1.4e-248 brnQ U Component of the transport system for branched-chain amino acids
GAFDNDEC_00830 0.0 ubiB S ABC1 family
GAFDNDEC_00831 1.8e-108 aqpZ U Belongs to the MIP aquaporin (TC 1.A.8) family
GAFDNDEC_00832 2.7e-219 3.1.3.1 S associated with various cellular activities
GAFDNDEC_00833 1.4e-248 S Putative metallopeptidase domain
GAFDNDEC_00834 1.5e-49
GAFDNDEC_00835 7.7e-103 K Bacterial regulatory proteins, tetR family
GAFDNDEC_00836 5e-44
GAFDNDEC_00837 2.3e-99 S WxL domain surface cell wall-binding
GAFDNDEC_00838 1.5e-118 S WxL domain surface cell wall-binding
GAFDNDEC_00839 1.8e-163 S Cell surface protein
GAFDNDEC_00840 0.0 XK27_00720 S Leucine-rich repeat (LRR) protein
GAFDNDEC_00841 6.5e-262 nox C NADH oxidase
GAFDNDEC_00842 1.9e-83 yoaA 2.3.1.128 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GAFDNDEC_00843 0.0 pepO 3.4.24.71 O Peptidase family M13
GAFDNDEC_00844 3.3e-118 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
GAFDNDEC_00845 1.6e-32 copZ P Heavy-metal-associated domain
GAFDNDEC_00846 6.6e-96 dps P Belongs to the Dps family
GAFDNDEC_00847 1.2e-18
GAFDNDEC_00848 1.2e-39 yrkD S Metal-sensitive transcriptional repressor
GAFDNDEC_00849 1.5e-55 txlA O Thioredoxin-like domain
GAFDNDEC_00850 6.3e-142 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GAFDNDEC_00851 0.0 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
GAFDNDEC_00852 1.6e-182 celE 3.2.1.4 GH5,GH9 E GDSL-like Lipase/Acylhydrolase family
GAFDNDEC_00853 1.6e-126 ydcF S Gram-negative-bacterium-type cell wall biogenesis
GAFDNDEC_00854 8.4e-136 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
GAFDNDEC_00855 9.4e-183 yfeX P Peroxidase
GAFDNDEC_00856 2.3e-99 K transcriptional regulator
GAFDNDEC_00857 2.6e-159 4.1.1.46 S Amidohydrolase
GAFDNDEC_00858 2.8e-51 S Uncharacterized protein conserved in bacteria (DUF2316)
GAFDNDEC_00859 1.8e-107
GAFDNDEC_00861 1e-60
GAFDNDEC_00862 2.5e-53
GAFDNDEC_00863 6.8e-73 mltD CBM50 M PFAM NLP P60 protein
GAFDNDEC_00864 6e-57 L Transposase
GAFDNDEC_00865 4.3e-81 S Bacterial membrane protein, YfhO
GAFDNDEC_00866 4.7e-146 S Alpha/beta hydrolase of unknown function (DUF915)
GAFDNDEC_00867 2.1e-168 K LysR substrate binding domain
GAFDNDEC_00868 5.5e-236 EK Aminotransferase, class I
GAFDNDEC_00869 1.8e-126 tcyA ET Belongs to the bacterial solute-binding protein 3 family
GAFDNDEC_00870 8.1e-123 tcyB E ABC transporter
GAFDNDEC_00871 3.6e-137 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GAFDNDEC_00872 3.3e-120 tcyA ET Belongs to the bacterial solute-binding protein 3 family
GAFDNDEC_00873 3.8e-78 KT response to antibiotic
GAFDNDEC_00874 3.4e-52 K Transcriptional regulator
GAFDNDEC_00875 5.1e-84 XK27_06920 S Protein of unknown function (DUF1700)
GAFDNDEC_00876 1.7e-128 S Putative adhesin
GAFDNDEC_00877 0.0 scrA 2.7.1.193, 2.7.1.211 G phosphotransferase system
GAFDNDEC_00878 0.0 malA 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
GAFDNDEC_00879 1.4e-181 5.1.1.1 K Periplasmic binding proteins and sugar binding domain of LacI family
GAFDNDEC_00880 1.9e-203 S DUF218 domain
GAFDNDEC_00881 5.8e-127 ybbM S Uncharacterised protein family (UPF0014)
GAFDNDEC_00882 9.4e-118 ybbL S ABC transporter, ATP-binding protein
GAFDNDEC_00883 1.6e-274 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GAFDNDEC_00884 9.4e-77
GAFDNDEC_00885 5.9e-152 qorB 1.6.5.2 GM NmrA-like family
GAFDNDEC_00886 2.5e-147 cof S haloacid dehalogenase-like hydrolase
GAFDNDEC_00887 1.1e-92 scrK 2.7.1.2, 2.7.1.4 GK ROK family
GAFDNDEC_00888 7.5e-307 mngB 3.2.1.170, 3.2.1.24 GH38 G Glycosyl hydrolases family 38 N-terminal domain
GAFDNDEC_00889 4.1e-121 mngA 2.7.1.195, 2.7.1.202 U Phosphotransferase system, EIIC
GAFDNDEC_00890 2.4e-26 mngA 2.7.1.195, 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
GAFDNDEC_00891 1.7e-20 fryA 2.7.1.202 G COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type)
GAFDNDEC_00892 2.2e-90 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GAFDNDEC_00893 2e-77 merR K MerR family regulatory protein
GAFDNDEC_00894 2e-155 1.6.5.2 GM NmrA-like family
GAFDNDEC_00895 0.0 treB 2.7.1.193, 2.7.1.211 G phosphotransferase system
GAFDNDEC_00896 1.1e-126 magIII L Base excision DNA repair protein, HhH-GPD family
GAFDNDEC_00897 1.4e-08
GAFDNDEC_00898 4.4e-100 S NADPH-dependent FMN reductase
GAFDNDEC_00899 2.3e-237 S module of peptide synthetase
GAFDNDEC_00900 6.9e-107
GAFDNDEC_00901 9.8e-88 perR P Belongs to the Fur family
GAFDNDEC_00902 7.1e-59 S Enterocin A Immunity
GAFDNDEC_00903 5.4e-36 S Phospholipase_D-nuclease N-terminal
GAFDNDEC_00904 1.8e-169 cpdA 2.1.2.2, 3.1.4.17, 3.1.4.53 S Calcineurin-like phosphoesterase
GAFDNDEC_00905 3.8e-104 J Acetyltransferase (GNAT) domain
GAFDNDEC_00906 5.1e-64 lrgA S LrgA family
GAFDNDEC_00907 7.3e-127 lrgB M LrgB-like family
GAFDNDEC_00908 3.2e-145 DegV S EDD domain protein, DegV family
GAFDNDEC_00909 4.1e-25
GAFDNDEC_00910 3.5e-118 yugP S Putative neutral zinc metallopeptidase
GAFDNDEC_00911 9.9e-285 crtI 1.3.99.26, 1.3.99.28, 1.3.99.29, 1.3.99.31 Q Flavin containing amine oxidoreductase
GAFDNDEC_00912 4.8e-165 crtB 2.5.1.21, 2.5.1.32, 2.5.1.99 I Squalene/phytoene synthase
GAFDNDEC_00913 4.3e-29 D Alpha beta
GAFDNDEC_00914 1.4e-121 D Alpha beta
GAFDNDEC_00915 6.6e-196 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
GAFDNDEC_00916 7.3e-258 gor 1.8.1.7 C Glutathione reductase
GAFDNDEC_00917 9.8e-55 S Enterocin A Immunity
GAFDNDEC_00918 1.3e-176 S Oxidoreductase family, NAD-binding Rossmann fold
GAFDNDEC_00919 3.2e-197 yhhX 1.1.1.371 S Oxidoreductase family, C-terminal alpha/beta domain
GAFDNDEC_00920 0.0 yjcE P Sodium proton antiporter
GAFDNDEC_00921 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GAFDNDEC_00922 3.2e-106 pncA Q Isochorismatase family
GAFDNDEC_00923 1.8e-131
GAFDNDEC_00924 2.9e-82 skfE V ABC transporter
GAFDNDEC_00925 9.5e-65 yvoA_1 K Transcriptional regulator, GntR family
GAFDNDEC_00926 1.2e-45 S Enterocin A Immunity
GAFDNDEC_00927 3.5e-174 D Alpha beta
GAFDNDEC_00928 0.0 pepF2 E Oligopeptidase F
GAFDNDEC_00929 1.3e-72 K Transcriptional regulator
GAFDNDEC_00930 3e-164
GAFDNDEC_00931 1.3e-57
GAFDNDEC_00932 2.6e-48
GAFDNDEC_00933 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
GAFDNDEC_00934 1.9e-68
GAFDNDEC_00935 7.1e-144 yjfP S Dienelactone hydrolase family
GAFDNDEC_00936 2.3e-56 dsbJ 2.7.1.180, 5.3.4.1 CO Thioredoxin
GAFDNDEC_00937 4.2e-206 metB 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
GAFDNDEC_00938 5.2e-47
GAFDNDEC_00939 6.3e-45
GAFDNDEC_00940 5e-82 yybC S Protein of unknown function (DUF2798)
GAFDNDEC_00941 1.7e-73
GAFDNDEC_00942 4e-60
GAFDNDEC_00943 5.1e-195 lplA 6.3.1.20 H Lipoate-protein ligase
GAFDNDEC_00944 0.0 acm2 3.2.1.17 NU Bacterial SH3 domain
GAFDNDEC_00945 2.7e-79 uspA T universal stress protein
GAFDNDEC_00946 6.6e-154 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GAFDNDEC_00947 7.5e-20
GAFDNDEC_00948 4.2e-44 S zinc-ribbon domain
GAFDNDEC_00949 9.6e-70 S response to antibiotic
GAFDNDEC_00950 1.7e-48 K Cro/C1-type HTH DNA-binding domain
GAFDNDEC_00951 3.3e-21 S Protein of unknown function (DUF2929)
GAFDNDEC_00952 2.7e-224 lsgC M Glycosyl transferases group 1
GAFDNDEC_00953 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
GAFDNDEC_00954 1.1e-161 S Putative esterase
GAFDNDEC_00955 2.4e-130 gntR2 K Transcriptional regulator
GAFDNDEC_00956 5.8e-91 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GAFDNDEC_00957 2.6e-138
GAFDNDEC_00958 3.1e-116 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
GAFDNDEC_00959 5.5e-138 rrp8 K LytTr DNA-binding domain
GAFDNDEC_00960 4.2e-92 M1-874 K Domain of unknown function (DUF1836)
GAFDNDEC_00961 7.7e-61
GAFDNDEC_00962 4.1e-74 hspX O Belongs to the small heat shock protein (HSP20) family
GAFDNDEC_00963 1.3e-57
GAFDNDEC_00964 1.2e-239 yhdP S Transporter associated domain
GAFDNDEC_00965 4.9e-87 nrdI F Belongs to the NrdI family
GAFDNDEC_00966 2.6e-270 yjcE P Sodium proton antiporter
GAFDNDEC_00967 1.1e-212 yttB EGP Major facilitator Superfamily
GAFDNDEC_00968 8.6e-63 K helix_turn_helix, mercury resistance
GAFDNDEC_00969 8.7e-173 C Zinc-binding dehydrogenase
GAFDNDEC_00970 8.5e-57 S SdpI/YhfL protein family
GAFDNDEC_00971 6.3e-295 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GAFDNDEC_00972 6.7e-259 gabR K Bacterial regulatory proteins, gntR family
GAFDNDEC_00973 2.7e-216 patA 2.6.1.1 E Aminotransferase
GAFDNDEC_00974 1.1e-158 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GAFDNDEC_00975 3e-18
GAFDNDEC_00976 1.7e-126 S membrane transporter protein
GAFDNDEC_00977 4.3e-161 mleR K LysR family
GAFDNDEC_00978 5.6e-115 ylbE GM NAD(P)H-binding
GAFDNDEC_00979 8.2e-96 wecD K Acetyltransferase (GNAT) family
GAFDNDEC_00980 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
GAFDNDEC_00981 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
GAFDNDEC_00982 3.9e-168 ydcZ S Putative inner membrane exporter, YdcZ
GAFDNDEC_00983 6.2e-114 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GAFDNDEC_00984 1.8e-125 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
GAFDNDEC_00985 3.3e-169 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
GAFDNDEC_00986 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
GAFDNDEC_00987 1.2e-213 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
GAFDNDEC_00988 6.4e-243 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
GAFDNDEC_00989 3e-170 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
GAFDNDEC_00990 1.1e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GAFDNDEC_00991 3.9e-298 pucR QT Purine catabolism regulatory protein-like family
GAFDNDEC_00992 2.7e-236 pbuX F xanthine permease
GAFDNDEC_00993 2.4e-221 pbuG S Permease family
GAFDNDEC_00994 1.9e-161 GM NmrA-like family
GAFDNDEC_00995 5.5e-155 T EAL domain
GAFDNDEC_00996 1.3e-93
GAFDNDEC_00997 1.9e-250 pgaC GT2 M Glycosyl transferase
GAFDNDEC_00998 8.7e-127 2.1.1.14 E Methionine synthase
GAFDNDEC_00999 1.6e-214 purD 6.3.4.13 F Belongs to the GARS family
GAFDNDEC_01000 3.9e-287 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
GAFDNDEC_01001 1.7e-102 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
GAFDNDEC_01002 1.5e-189 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
GAFDNDEC_01003 1.1e-280 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
GAFDNDEC_01004 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GAFDNDEC_01005 2e-126 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GAFDNDEC_01006 3.6e-41 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GAFDNDEC_01007 2.9e-131 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
GAFDNDEC_01008 8.7e-212 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GAFDNDEC_01009 1.7e-79 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
GAFDNDEC_01010 1.5e-223 XK27_09615 1.3.5.4 S reductase
GAFDNDEC_01011 1.8e-110 XK27_09620 1.3.5.4 S NADPH-dependent FMN reductase
GAFDNDEC_01012 1.3e-190 lplA2 6.3.1.20 H Bacterial lipoate protein ligase C-terminus
GAFDNDEC_01013 1.4e-147 ptp3 3.1.3.48 T Tyrosine phosphatase family
GAFDNDEC_01014 9.2e-118 cah 4.2.1.1 P Eukaryotic-type carbonic anhydrase
GAFDNDEC_01015 7.5e-149 S Alpha/beta hydrolase of unknown function (DUF915)
GAFDNDEC_01016 1.5e-180 ansA 3.5.1.1 EJ Asparaginase
GAFDNDEC_01017 1.7e-139 cysA V ABC transporter, ATP-binding protein
GAFDNDEC_01018 0.0 V FtsX-like permease family
GAFDNDEC_01019 8e-42
GAFDNDEC_01020 7.9e-61 gntR1 K Transcriptional regulator, GntR family
GAFDNDEC_01021 6.9e-164 V ABC transporter, ATP-binding protein
GAFDNDEC_01022 5.8e-149
GAFDNDEC_01023 6.7e-81 uspA T universal stress protein
GAFDNDEC_01024 1.2e-35
GAFDNDEC_01025 2.1e-70 gtcA S Teichoic acid glycosylation protein
GAFDNDEC_01026 9.7e-88
GAFDNDEC_01027 9.4e-50
GAFDNDEC_01029 1.5e-233 malY 4.4.1.8 E Aminotransferase, class I
GAFDNDEC_01030 7.3e-86 2.7.7.1, 3.6.1.55 F belongs to the nudix hydrolase family
GAFDNDEC_01031 5.4e-118
GAFDNDEC_01032 1.5e-52
GAFDNDEC_01034 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
GAFDNDEC_01035 2.6e-280 thrC 4.2.3.1 E Threonine synthase
GAFDNDEC_01036 4.5e-146 XK27_02985 S Sucrose-6F-phosphate phosphohydrolase
GAFDNDEC_01037 4.4e-11 mcbG S Pentapeptide repeats (8 copies)
GAFDNDEC_01038 1.7e-111 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
GAFDNDEC_01039 1.2e-100 3.6.1.13 L Belongs to the Nudix hydrolase family
GAFDNDEC_01040 7.8e-69 FG Scavenger mRNA decapping enzyme C-term binding
GAFDNDEC_01041 7.5e-135 IQ Enoyl-(Acyl carrier protein) reductase
GAFDNDEC_01042 1.8e-36 XK27_01315 S Protein of unknown function (DUF2829)
GAFDNDEC_01043 8.4e-212 S Bacterial protein of unknown function (DUF871)
GAFDNDEC_01044 1.5e-230 S Sterol carrier protein domain
GAFDNDEC_01045 2.7e-225 EGP Major facilitator Superfamily
GAFDNDEC_01046 3.6e-88 niaR S 3H domain
GAFDNDEC_01047 6.6e-265 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GAFDNDEC_01048 2.8e-117 K Transcriptional regulator
GAFDNDEC_01049 1.2e-153 V ABC transporter
GAFDNDEC_01050 2.6e-132 V AAA domain, putative AbiEii toxin, Type IV TA system
GAFDNDEC_01051 3.7e-246 dsdA 4.3.1.18 E Belongs to the serine threonine dehydratase family. DsdA subfamily
GAFDNDEC_01052 2e-293 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GAFDNDEC_01053 1.2e-295 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GAFDNDEC_01054 1.8e-54 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
GAFDNDEC_01055 2.3e-48 pts20B 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
GAFDNDEC_01056 1.8e-130 gntR K UTRA
GAFDNDEC_01057 6.8e-141 epsV 2.7.8.12 S glycosyl transferase family 2
GAFDNDEC_01058 6.5e-122 pgm7 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
GAFDNDEC_01059 1.8e-81
GAFDNDEC_01060 9.8e-152 S hydrolase
GAFDNDEC_01061 4.2e-181 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GAFDNDEC_01062 1.4e-151 EG EamA-like transporter family
GAFDNDEC_01063 3.6e-174 pdxB 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
GAFDNDEC_01064 1.2e-100 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
GAFDNDEC_01065 1e-232
GAFDNDEC_01066 1.1e-77 fld C Flavodoxin
GAFDNDEC_01067 0.0 M Bacterial Ig-like domain (group 3)
GAFDNDEC_01068 0.0 M Bacterial surface protein 26-residue PARCEL repeat (3 repeats)
GAFDNDEC_01069 2.7e-32
GAFDNDEC_01070 3.1e-128 aroD 1.1.1.25, 4.2.1.10 E Type I 3-dehydroquinase
GAFDNDEC_01071 2.1e-266 ycaM E amino acid
GAFDNDEC_01072 7.9e-79 K Winged helix DNA-binding domain
GAFDNDEC_01073 3.3e-166 S Oxidoreductase, aldo keto reductase family protein
GAFDNDEC_01074 5.7e-163 akr5f 1.1.1.346 S reductase
GAFDNDEC_01075 4.6e-163 K Transcriptional regulator
GAFDNDEC_01077 9.5e-89 cps3H
GAFDNDEC_01078 5.1e-201 cps3I G Acyltransferase family
GAFDNDEC_01079 4.7e-148 cps1D M Domain of unknown function (DUF4422)
GAFDNDEC_01080 3.9e-241 rfbX S Membrane protein involved in the export of O-antigen and teichoic acid
GAFDNDEC_01081 3.2e-121 rfbP M Bacterial sugar transferase
GAFDNDEC_01083 1.1e-52
GAFDNDEC_01084 7.3e-33 S Protein of unknown function (DUF2922)
GAFDNDEC_01085 7e-30
GAFDNDEC_01086 5.6e-26
GAFDNDEC_01087 9.8e-100 K DNA-templated transcription, initiation
GAFDNDEC_01088 7.9e-126
GAFDNDEC_01089 2.8e-140 recX 2.4.1.337 GT4 S Regulatory protein RecX
GAFDNDEC_01090 4.1e-106 ygaC J Belongs to the UPF0374 family
GAFDNDEC_01091 2.3e-133 cwlO M NlpC/P60 family
GAFDNDEC_01092 7.8e-48 K sequence-specific DNA binding
GAFDNDEC_01093 1.3e-27 S Antitoxin component of a toxin-antitoxin (TA) module
GAFDNDEC_01094 1.7e-139 pbpX V Beta-lactamase
GAFDNDEC_01095 2.3e-23 pbpX V Beta-lactamase
GAFDNDEC_01096 1.7e-168 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
GAFDNDEC_01097 9.3e-188 yueF S AI-2E family transporter
GAFDNDEC_01098 3.7e-72 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
GAFDNDEC_01099 9.5e-213 gntP EG Gluconate
GAFDNDEC_01100 1.4e-292 gntK 2.7.1.12, 2.7.1.16, 2.7.1.17, 2.7.1.5 G Belongs to the FGGY kinase family
GAFDNDEC_01101 1.1e-169 gnd 1.1.1.343, 1.1.1.44 G Dehydrogenase
GAFDNDEC_01102 2.4e-253 gor 1.8.1.7 C Glutathione reductase
GAFDNDEC_01103 6.9e-308 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
GAFDNDEC_01104 2.3e-273
GAFDNDEC_01105 9.4e-197 M MucBP domain
GAFDNDEC_01106 4.6e-160 lysR5 K LysR substrate binding domain
GAFDNDEC_01107 5.5e-126 yxaA S membrane transporter protein
GAFDNDEC_01108 3.2e-57 ywjH S Protein of unknown function (DUF1634)
GAFDNDEC_01109 1.3e-309 oppA E ABC transporter, substratebinding protein
GAFDNDEC_01110 2.3e-165 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
GAFDNDEC_01111 1.1e-189 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
GAFDNDEC_01112 1.2e-202 oppD P Belongs to the ABC transporter superfamily
GAFDNDEC_01113 1.8e-181 oppF P Belongs to the ABC transporter superfamily
GAFDNDEC_01114 1e-63 K Winged helix DNA-binding domain
GAFDNDEC_01115 4e-101 L Integrase
GAFDNDEC_01116 0.0 clpE O Belongs to the ClpA ClpB family
GAFDNDEC_01117 6.5e-30
GAFDNDEC_01118 2.7e-39 ptsH G phosphocarrier protein HPR
GAFDNDEC_01119 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GAFDNDEC_01120 1.4e-223 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
GAFDNDEC_01121 6.9e-200 cpoA GT4 M Glycosyltransferase, group 1 family protein
GAFDNDEC_01122 7.4e-189 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
GAFDNDEC_01123 1.2e-227 dacA 3.4.16.4 M Belongs to the peptidase S11 family
GAFDNDEC_01124 1.7e-226 patA 2.6.1.1 E Aminotransferase
GAFDNDEC_01125 1.1e-34 ykuJ S Protein of unknown function (DUF1797)
GAFDNDEC_01126 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GAFDNDEC_01127 3.5e-64
GAFDNDEC_01128 1.6e-75 yugI 5.3.1.9 J general stress protein
GAFDNDEC_01129 5.5e-109 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GAFDNDEC_01130 3e-119 dedA S SNARE-like domain protein
GAFDNDEC_01131 2.1e-117 S Protein of unknown function (DUF1461)
GAFDNDEC_01132 1.5e-146 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
GAFDNDEC_01133 1.5e-80 yutD S Protein of unknown function (DUF1027)
GAFDNDEC_01134 6.6e-270 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
GAFDNDEC_01135 4.4e-117 S Calcineurin-like phosphoesterase
GAFDNDEC_01136 1.2e-252 cycA E Amino acid permease
GAFDNDEC_01137 7e-220 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GAFDNDEC_01138 2.7e-186 ytxK 2.1.1.72 L N-6 DNA Methylase
GAFDNDEC_01140 1.4e-86 S Prokaryotic N-terminal methylation motif
GAFDNDEC_01141 8.6e-20
GAFDNDEC_01142 1.2e-51 gspG NU general secretion pathway protein
GAFDNDEC_01143 5.5e-43 comGC U competence protein ComGC
GAFDNDEC_01144 7.4e-189 comGB NU type II secretion system
GAFDNDEC_01145 2.8e-174 comGA NU Type II IV secretion system protein
GAFDNDEC_01146 4.8e-160 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GAFDNDEC_01147 8.3e-131 yebC K Transcriptional regulatory protein
GAFDNDEC_01148 1.7e-48 S DsrE/DsrF-like family
GAFDNDEC_01149 2.3e-164 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
GAFDNDEC_01150 1.9e-181 ccpA K catabolite control protein A
GAFDNDEC_01151 4.9e-215 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
GAFDNDEC_01152 7.2e-80 K helix_turn_helix, mercury resistance
GAFDNDEC_01153 2.8e-56
GAFDNDEC_01154 1.9e-23 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
GAFDNDEC_01155 2.6e-158 ykuT M mechanosensitive ion channel
GAFDNDEC_01156 4.9e-226 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
GAFDNDEC_01157 2.6e-76 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
GAFDNDEC_01158 6.5e-87 ykuL S (CBS) domain
GAFDNDEC_01159 4e-95 S Phosphoesterase
GAFDNDEC_01160 1.5e-109 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GAFDNDEC_01161 4.1e-150 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
GAFDNDEC_01162 1.9e-92 yslB S Protein of unknown function (DUF2507)
GAFDNDEC_01163 3.3e-52 trxA O Belongs to the thioredoxin family
GAFDNDEC_01164 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
GAFDNDEC_01165 2.7e-36 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
GAFDNDEC_01166 1.6e-48 yrzB S Belongs to the UPF0473 family
GAFDNDEC_01167 7.3e-74 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GAFDNDEC_01168 2.4e-43 yrzL S Belongs to the UPF0297 family
GAFDNDEC_01169 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GAFDNDEC_01170 3.5e-244 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
GAFDNDEC_01171 7e-178 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
GAFDNDEC_01172 5.3e-217 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GAFDNDEC_01173 2.8e-29 yajC U Preprotein translocase
GAFDNDEC_01174 3.3e-227 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
GAFDNDEC_01175 6.3e-201 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
GAFDNDEC_01176 2.1e-188 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
GAFDNDEC_01177 6.6e-105 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
GAFDNDEC_01178 7.4e-89
GAFDNDEC_01179 0.0 S Bacterial membrane protein YfhO
GAFDNDEC_01180 2.8e-72
GAFDNDEC_01181 5.2e-237 rarA L recombination factor protein RarA
GAFDNDEC_01182 0.0 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
GAFDNDEC_01183 5.9e-95 cytR 5.1.1.1 K Periplasmic binding proteins and sugar binding domain of LacI family
GAFDNDEC_01184 6e-66 2.7.1.191 G PTS system sorbose subfamily IIB component
GAFDNDEC_01185 3.6e-103 G PTS system sorbose-specific iic component
GAFDNDEC_01186 2.7e-104 G PTS system mannose fructose sorbose family IID component
GAFDNDEC_01187 9.2e-42 2.7.1.191 G PTS system fructose IIA component
GAFDNDEC_01188 5.1e-232 malL 3.2.1.10 GH13 G COG0366 Glycosidases
GAFDNDEC_01189 3.3e-43 czrA K Helix-turn-helix domain
GAFDNDEC_01190 3.1e-110 S Protein of unknown function (DUF1648)
GAFDNDEC_01191 2.3e-81 yueI S Protein of unknown function (DUF1694)
GAFDNDEC_01192 5.2e-113 yktB S Belongs to the UPF0637 family
GAFDNDEC_01193 3.1e-107 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GAFDNDEC_01194 5e-81 ytsP 1.8.4.14 T GAF domain-containing protein
GAFDNDEC_01195 2.4e-311 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
GAFDNDEC_01197 2.9e-218 iscS2 2.8.1.7 E Aminotransferase class V
GAFDNDEC_01198 2.7e-227 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GAFDNDEC_01199 2.6e-191 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
GAFDNDEC_01200 3.3e-33 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
GAFDNDEC_01201 3e-89 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
GAFDNDEC_01202 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
GAFDNDEC_01203 1.4e-248 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
GAFDNDEC_01204 6.6e-116 radC L DNA repair protein
GAFDNDEC_01205 2.8e-161 mreB D cell shape determining protein MreB
GAFDNDEC_01206 2.6e-144 mreC M Involved in formation and maintenance of cell shape
GAFDNDEC_01207 1.6e-88 mreD M rod shape-determining protein MreD
GAFDNDEC_01208 1.1e-116 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
GAFDNDEC_01209 2.7e-146 minD D Belongs to the ParA family
GAFDNDEC_01210 4.6e-109 glnP P ABC transporter permease
GAFDNDEC_01211 2.5e-115 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GAFDNDEC_01212 1.5e-155 aatB ET ABC transporter substrate-binding protein
GAFDNDEC_01213 3.8e-254 lysC 2.7.2.4 E Belongs to the aspartokinase family
GAFDNDEC_01214 4.2e-231 ymfF S Peptidase M16 inactive domain protein
GAFDNDEC_01215 2.9e-251 ymfH S Peptidase M16
GAFDNDEC_01216 5.7e-110 ymfM S Helix-turn-helix domain
GAFDNDEC_01217 3.7e-97 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GAFDNDEC_01218 9.4e-231 cinA 3.5.1.42 S Belongs to the CinA family
GAFDNDEC_01219 5e-191 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GAFDNDEC_01220 2.1e-216 rny S Endoribonuclease that initiates mRNA decay
GAFDNDEC_01221 2.7e-154 ymdB S YmdB-like protein
GAFDNDEC_01222 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
GAFDNDEC_01223 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
GAFDNDEC_01224 6.8e-53
GAFDNDEC_01225 0.0 pelX UW LPXTG-motif cell wall anchor domain protein
GAFDNDEC_01226 1.4e-86
GAFDNDEC_01227 2.3e-139 ecsA_2 V AAA domain, putative AbiEii toxin, Type IV TA system
GAFDNDEC_01228 4.5e-270 XK27_00765
GAFDNDEC_01230 1.8e-270 trpE 4.1.3.27 EH Anthranilate synthase component I, N terminal region
GAFDNDEC_01231 1.5e-104 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH Peptidase C26
GAFDNDEC_01232 1.7e-166 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
GAFDNDEC_01233 6.4e-129 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
GAFDNDEC_01234 5.9e-109 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E Belongs to the TrpF family
GAFDNDEC_01235 2.5e-225 trpB 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
GAFDNDEC_01236 1.9e-141 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
GAFDNDEC_01237 5.3e-63 entB 3.5.1.19 Q Isochorismatase family
GAFDNDEC_01238 3.1e-178 1.6.5.5 C Zinc-binding dehydrogenase
GAFDNDEC_01239 1.6e-67 ybbJ K Acetyltransferase (GNAT) family
GAFDNDEC_01240 3.1e-218 E glutamate:sodium symporter activity
GAFDNDEC_01241 3.2e-214 3.5.1.47 E Peptidase family M20/M25/M40
GAFDNDEC_01242 4.6e-199 adhB 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
GAFDNDEC_01243 8.5e-60 S Protein of unknown function (DUF1648)
GAFDNDEC_01244 2.5e-102 S Belongs to the short-chain dehydrogenases reductases (SDR) family
GAFDNDEC_01245 1.3e-151 yneE K Transcriptional regulator
GAFDNDEC_01246 2.3e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
GAFDNDEC_01247 5e-179 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GAFDNDEC_01248 1.3e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
GAFDNDEC_01249 4.4e-169 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
GAFDNDEC_01250 1.2e-126 IQ reductase
GAFDNDEC_01251 9.5e-228 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
GAFDNDEC_01252 2.3e-73 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
GAFDNDEC_01253 6.1e-70 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
GAFDNDEC_01254 1.2e-258 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
GAFDNDEC_01255 3.5e-157 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
GAFDNDEC_01256 3e-139 accA 2.1.3.15, 6.4.1.2 I alpha subunit
GAFDNDEC_01257 1.5e-135 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
GAFDNDEC_01258 9.2e-98 2.7.8.7 H Belongs to the P-Pant transferase superfamily
GAFDNDEC_01259 2.2e-123 S Protein of unknown function (DUF554)
GAFDNDEC_01260 3.6e-160 K LysR substrate binding domain
GAFDNDEC_01261 4.6e-88 ykhA 3.1.2.20 I Thioesterase superfamily
GAFDNDEC_01262 1.7e-193 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
GAFDNDEC_01263 6.2e-94 K transcriptional regulator
GAFDNDEC_01264 1.1e-303 norB EGP Major Facilitator
GAFDNDEC_01265 1.2e-139 f42a O Band 7 protein
GAFDNDEC_01266 1.5e-86 S Protein of unknown function with HXXEE motif
GAFDNDEC_01267 1.9e-13 K Bacterial regulatory proteins, tetR family
GAFDNDEC_01268 1.9e-59 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
GAFDNDEC_01269 3.4e-140 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
GAFDNDEC_01270 1.4e-95 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GAFDNDEC_01271 7.7e-39 ylqC S Belongs to the UPF0109 family
GAFDNDEC_01272 2.9e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
GAFDNDEC_01273 1.1e-219 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GAFDNDEC_01274 1.3e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
GAFDNDEC_01275 1.9e-169 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
GAFDNDEC_01276 0.0 smc D Required for chromosome condensation and partitioning
GAFDNDEC_01277 2.2e-128 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
GAFDNDEC_01278 1.7e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
GAFDNDEC_01279 1.9e-189 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
GAFDNDEC_01280 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
GAFDNDEC_01281 0.0 yloV S DAK2 domain fusion protein YloV
GAFDNDEC_01282 1.8e-57 asp S Asp23 family, cell envelope-related function
GAFDNDEC_01283 4.9e-27 rpmB J Belongs to the bacterial ribosomal protein bL28 family
GAFDNDEC_01284 5.8e-123 thiN 2.7.6.2 H thiamine pyrophosphokinase
GAFDNDEC_01285 3.6e-117 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
GAFDNDEC_01286 3.2e-164 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
GAFDNDEC_01287 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
GAFDNDEC_01288 1.7e-134 stp 3.1.3.16 T phosphatase
GAFDNDEC_01289 1.4e-253 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
GAFDNDEC_01290 4.2e-175 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GAFDNDEC_01291 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GAFDNDEC_01292 2e-217 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GAFDNDEC_01293 2.4e-30 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
GAFDNDEC_01294 3.3e-112 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
GAFDNDEC_01295 4.5e-55
GAFDNDEC_01296 4.9e-106 opuCD P Binding-protein-dependent transport system inner membrane component
GAFDNDEC_01297 6e-174 opuCC M Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
GAFDNDEC_01298 1.2e-104 opuCB E ABC transporter permease
GAFDNDEC_01299 5.7e-222 opuCA 3.6.3.32 E ABC transporter, ATP-binding protein
GAFDNDEC_01300 6.3e-307 recN L May be involved in recombinational repair of damaged DNA
GAFDNDEC_01301 7.4e-77 argR K Regulates arginine biosynthesis genes
GAFDNDEC_01302 4e-150 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
GAFDNDEC_01303 3e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GAFDNDEC_01304 4.3e-33 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GAFDNDEC_01305 9.3e-245 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GAFDNDEC_01306 2.2e-151 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GAFDNDEC_01307 5.2e-69 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GAFDNDEC_01308 3.5e-74 yqhY S Asp23 family, cell envelope-related function
GAFDNDEC_01309 2.2e-99 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GAFDNDEC_01310 4.5e-194 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
GAFDNDEC_01311 5.4e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
GAFDNDEC_01312 3.2e-53 ysxB J Cysteine protease Prp
GAFDNDEC_01313 7.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
GAFDNDEC_01314 1.8e-89 K Transcriptional regulator
GAFDNDEC_01315 5.4e-19
GAFDNDEC_01316 9.8e-147 S Cell surface protein
GAFDNDEC_01317 2.8e-263
GAFDNDEC_01318 3.5e-228 hpk9 2.7.13.3 T GHKL domain
GAFDNDEC_01319 2.9e-38 S TfoX C-terminal domain
GAFDNDEC_01320 6e-140 K Helix-turn-helix domain
GAFDNDEC_01321 0.0 M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
GAFDNDEC_01322 2.4e-65 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
GAFDNDEC_01323 3.2e-43 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
GAFDNDEC_01324 0.0 ctpA 3.6.3.54 P P-type ATPase
GAFDNDEC_01325 5.4e-214 adhC 1.1.1.90 C Zn-dependent alcohol dehydrogenases, class III
GAFDNDEC_01326 8.7e-223 dhaT 1.1.1.1, 1.1.1.202 C Dehydrogenase
GAFDNDEC_01327 3.9e-66 lysM M LysM domain
GAFDNDEC_01328 9.6e-267 yjeM E Amino Acid
GAFDNDEC_01329 1.9e-144 K Helix-turn-helix XRE-family like proteins
GAFDNDEC_01330 1.1e-69
GAFDNDEC_01332 5e-162 IQ KR domain
GAFDNDEC_01333 2.7e-227 amd 3.5.1.47 E Peptidase family M20/M25/M40
GAFDNDEC_01334 6.2e-310 XK27_09600 V ABC transporter, ATP-binding protein
GAFDNDEC_01335 0.0 V ABC transporter
GAFDNDEC_01336 8.6e-218 ykiI
GAFDNDEC_01337 3.6e-117 GM NAD(P)H-binding
GAFDNDEC_01338 1.9e-138 IQ reductase
GAFDNDEC_01339 3.7e-60 I sulfurtransferase activity
GAFDNDEC_01340 2.7e-78 yphH S Cupin domain
GAFDNDEC_01341 2.6e-91 S Phosphatidylethanolamine-binding protein
GAFDNDEC_01342 7.8e-117 GM NAD(P)H-binding
GAFDNDEC_01343 5.3e-174 C C4-dicarboxylate transmembrane transporter activity
GAFDNDEC_01344 1e-119 S Belongs to the short-chain dehydrogenases reductases (SDR) family
GAFDNDEC_01345 1e-72
GAFDNDEC_01346 2e-166 K Bacterial regulatory helix-turn-helix protein, lysR family
GAFDNDEC_01347 1e-284 dinB 2.7.7.7 L impB/mucB/samB family C-terminal domain
GAFDNDEC_01348 1.6e-73 S Psort location Cytoplasmic, score
GAFDNDEC_01349 1.4e-217 T diguanylate cyclase
GAFDNDEC_01350 2e-120 tag 3.2.2.20 L Methyladenine glycosylase
GAFDNDEC_01351 4.2e-92
GAFDNDEC_01352 1.1e-161 psaA P Belongs to the bacterial solute-binding protein 9 family
GAFDNDEC_01353 1.3e-52 nudA S ASCH
GAFDNDEC_01354 2.3e-107 S SdpI/YhfL protein family
GAFDNDEC_01355 2.3e-95 M Lysin motif
GAFDNDEC_01356 1.7e-52 M Lysin motif
GAFDNDEC_01357 6.1e-29 lytE M LysM domain protein
GAFDNDEC_01358 7.4e-67 gcvH E Glycine cleavage H-protein
GAFDNDEC_01359 5.7e-177 sepS16B
GAFDNDEC_01360 1.3e-131
GAFDNDEC_01361 0.0 dinG 3.1.12.1, 3.6.4.12 KL DEAD_2
GAFDNDEC_01362 2.2e-55
GAFDNDEC_01363 8.9e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GAFDNDEC_01364 3.8e-78 elaA S GNAT family
GAFDNDEC_01365 3.8e-75 K Transcriptional regulator
GAFDNDEC_01366 8.7e-226 ndh 1.6.99.3 C NADH dehydrogenase
GAFDNDEC_01367 4.3e-40
GAFDNDEC_01368 4e-206 potD P ABC transporter
GAFDNDEC_01369 3.4e-141 potC P ABC transporter permease
GAFDNDEC_01370 2e-149 potB P ABC transporter permease
GAFDNDEC_01371 1.2e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
GAFDNDEC_01372 5e-96 puuR K Cupin domain
GAFDNDEC_01373 1.1e-83 6.3.3.2 S ASCH
GAFDNDEC_01374 1e-84 K GNAT family
GAFDNDEC_01375 2.6e-89 K acetyltransferase
GAFDNDEC_01376 8.1e-22
GAFDNDEC_01377 1.4e-59 ytrA K helix_turn_helix gluconate operon transcriptional repressor
GAFDNDEC_01378 2e-163 ytrB V ABC transporter
GAFDNDEC_01379 1.1e-57
GAFDNDEC_01380 9.1e-118
GAFDNDEC_01381 4.1e-256 adhE 1.1.1.1, 1.2.1.10 C Aldehyde dehydrogenase family
GAFDNDEC_01382 2.8e-162 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
GAFDNDEC_01384 2.3e-240 xylP1 G MFS/sugar transport protein
GAFDNDEC_01385 3e-122 qmcA O prohibitin homologues
GAFDNDEC_01386 3e-30
GAFDNDEC_01387 1.9e-280 pipD E Dipeptidase
GAFDNDEC_01388 3e-40
GAFDNDEC_01389 6.8e-96 bioY S BioY family
GAFDNDEC_01390 6e-177 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
GAFDNDEC_01391 6.2e-60 S CHY zinc finger
GAFDNDEC_01392 2.2e-111 metQ P NLPA lipoprotein
GAFDNDEC_01393 5.6e-125 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GAFDNDEC_01394 1.1e-86 metI U Binding-protein-dependent transport system inner membrane component
GAFDNDEC_01395 7.7e-148 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GAFDNDEC_01396 2.3e-223 mtnE 2.6.1.83 E Aminotransferase
GAFDNDEC_01397 7.1e-217
GAFDNDEC_01398 3.5e-154 tagG U Transport permease protein
GAFDNDEC_01399 1e-201 tagH 3.6.3.38, 3.6.3.40 GM Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
GAFDNDEC_01400 1.8e-111 hipB K Helix-turn-helix
GAFDNDEC_01401 5.5e-45 yitW S Iron-sulfur cluster assembly protein
GAFDNDEC_01402 7.2e-272 sufB O assembly protein SufB
GAFDNDEC_01403 7.1e-83 nifU C SUF system FeS assembly protein, NifU family
GAFDNDEC_01404 1.2e-233 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GAFDNDEC_01405 2.6e-244 sufD O FeS assembly protein SufD
GAFDNDEC_01406 4.2e-144 sufC O FeS assembly ATPase SufC
GAFDNDEC_01407 1.3e-34 feoA P FeoA domain
GAFDNDEC_01408 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
GAFDNDEC_01409 7.9e-21 S Virus attachment protein p12 family
GAFDNDEC_01410 1.1e-253 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
GAFDNDEC_01411 0.0 sftA D Belongs to the FtsK SpoIIIE SftA family
GAFDNDEC_01412 5.3e-113 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GAFDNDEC_01413 1.6e-54 ytzB S Peptidase propeptide and YPEB domain
GAFDNDEC_01414 9e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
GAFDNDEC_01415 3.2e-152 ytmP 2.7.1.89 M Choline/ethanolamine kinase
GAFDNDEC_01416 4e-223 ecsB U ABC transporter
GAFDNDEC_01417 1.6e-134 ecsA V ABC transporter, ATP-binding protein
GAFDNDEC_01418 9.9e-82 hit FG histidine triad
GAFDNDEC_01419 2e-42
GAFDNDEC_01420 3.3e-129 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
GAFDNDEC_01421 3.9e-77 S WxL domain surface cell wall-binding
GAFDNDEC_01422 2.6e-102 S WxL domain surface cell wall-binding
GAFDNDEC_01423 1.4e-192 S Fn3-like domain
GAFDNDEC_01424 3.5e-61
GAFDNDEC_01425 0.0
GAFDNDEC_01426 8e-241 npr 1.11.1.1 C NADH oxidase
GAFDNDEC_01427 1.8e-110 K Bacterial regulatory proteins, tetR family
GAFDNDEC_01428 7.9e-117 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
GAFDNDEC_01429 1.4e-106
GAFDNDEC_01430 9.3e-106 GBS0088 S Nucleotidyltransferase
GAFDNDEC_01431 1.4e-81 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
GAFDNDEC_01432 2.5e-225 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
GAFDNDEC_01433 2.7e-87 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
GAFDNDEC_01434 3.2e-171 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GAFDNDEC_01435 1.3e-34 S membrane
GAFDNDEC_01436 8.8e-81 rmaD K Transcriptional regulator
GAFDNDEC_01437 4.2e-115 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
GAFDNDEC_01438 1.2e-252 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
GAFDNDEC_01439 4.9e-198 asnA 6.3.1.1 F aspartate--ammonia ligase
GAFDNDEC_01440 3.7e-276 pipD E Dipeptidase
GAFDNDEC_01441 6.6e-221 2.7.7.7, 3.6.4.12 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
GAFDNDEC_01442 8.5e-41
GAFDNDEC_01443 4.1e-32 L leucine-zipper of insertion element IS481
GAFDNDEC_01444 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
GAFDNDEC_01445 9.3e-161 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
GAFDNDEC_01446 1.5e-50 K helix_turn_helix, Arsenical Resistance Operon Repressor
GAFDNDEC_01447 1.4e-136 S NADPH-dependent FMN reductase
GAFDNDEC_01448 2.1e-177
GAFDNDEC_01449 3.7e-219 yibE S overlaps another CDS with the same product name
GAFDNDEC_01450 2.9e-126 yibF S overlaps another CDS with the same product name
GAFDNDEC_01451 3.1e-101 3.2.2.20 K FR47-like protein
GAFDNDEC_01452 7.2e-121 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
GAFDNDEC_01453 5.6e-49
GAFDNDEC_01454 1e-190 nlhH_1 I alpha/beta hydrolase fold
GAFDNDEC_01455 1e-254 xylP2 G symporter
GAFDNDEC_01456 5.2e-281 murE 6.3.2.10, 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GAFDNDEC_01457 1.6e-219 dapG 1.1.1.3, 2.7.2.4 E Amino acid kinase family
GAFDNDEC_01458 0.0 asnB 6.3.5.4 E Asparagine synthase
GAFDNDEC_01459 7.2e-50 azlD S Branched-chain amino acid transport protein (AzlD)
GAFDNDEC_01460 1.3e-120 azlC E branched-chain amino acid
GAFDNDEC_01461 4.4e-35 yyaN K MerR HTH family regulatory protein
GAFDNDEC_01462 1e-106
GAFDNDEC_01463 1.4e-117 S Domain of unknown function (DUF4811)
GAFDNDEC_01464 7e-270 lmrB EGP Major facilitator Superfamily
GAFDNDEC_01465 1.7e-84 merR K MerR HTH family regulatory protein
GAFDNDEC_01466 2.6e-58
GAFDNDEC_01467 2.2e-119 sirR K iron dependent repressor
GAFDNDEC_01468 6e-31 cspC K Cold shock protein
GAFDNDEC_01469 8.4e-58 S Bacterial membrane protein, YfhO
GAFDNDEC_01470 9.2e-226 nupG F Nucleoside
GAFDNDEC_01471 2.7e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
GAFDNDEC_01472 2.7e-149 noc K Belongs to the ParB family
GAFDNDEC_01473 2.4e-136 soj D Sporulation initiation inhibitor
GAFDNDEC_01474 1.4e-156 spo0J K Belongs to the ParB family
GAFDNDEC_01475 9.8e-31 yyzM S Bacterial protein of unknown function (DUF951)
GAFDNDEC_01476 2e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
GAFDNDEC_01477 3.4e-124 XK27_01040 S Protein of unknown function (DUF1129)
GAFDNDEC_01478 2.3e-212 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GAFDNDEC_01479 2.6e-161 prsA 3.1.3.16, 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
GAFDNDEC_01480 2.6e-121 yoaK S Protein of unknown function (DUF1275)
GAFDNDEC_01481 3.2e-124 K response regulator
GAFDNDEC_01482 1.3e-213 hpk31 2.7.13.3 T Histidine kinase
GAFDNDEC_01483 1.4e-237 dacA 3.4.16.4 M Belongs to the peptidase S11 family
GAFDNDEC_01484 1.1e-89 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
GAFDNDEC_01485 5.1e-131 azlC E branched-chain amino acid
GAFDNDEC_01486 2.3e-54 azlD S branched-chain amino acid
GAFDNDEC_01487 4.7e-110 S membrane transporter protein
GAFDNDEC_01488 4.1e-54
GAFDNDEC_01490 1.5e-74 S Psort location Cytoplasmic, score
GAFDNDEC_01491 6e-97 S Domain of unknown function (DUF4352)
GAFDNDEC_01492 6.8e-25 S Protein of unknown function (DUF4064)
GAFDNDEC_01493 4.6e-126 KLT Protein tyrosine kinase
GAFDNDEC_01494 7.9e-163
GAFDNDEC_01495 5.2e-231 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
GAFDNDEC_01496 2.4e-83
GAFDNDEC_01497 2.9e-210 xylR GK ROK family
GAFDNDEC_01498 1.9e-171 K AI-2E family transporter
GAFDNDEC_01499 7.9e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GAFDNDEC_01500 2.3e-120 Q Methyltransferase domain
GAFDNDEC_01501 4.4e-39
GAFDNDEC_01502 2.9e-64 yobT S PFAM Metallo-beta-lactamase superfamily
GAFDNDEC_01503 2.4e-86 L Integrase core domain
GAFDNDEC_01504 9.4e-53
GAFDNDEC_01505 1.3e-28
GAFDNDEC_01506 8.8e-207 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
GAFDNDEC_01507 4.5e-114 1.14.99.53 AA10 S Lytic polysaccharide mono-oxygenase, cellulose-degrading
GAFDNDEC_01508 7.9e-45 ycnE 3.1.1.29 S Antibiotic biosynthesis monooxygenase
GAFDNDEC_01509 7.9e-41
GAFDNDEC_01510 1.3e-66 tspO T TspO/MBR family
GAFDNDEC_01511 6.3e-76 uspA T Belongs to the universal stress protein A family
GAFDNDEC_01512 8e-66 S Protein of unknown function (DUF805)
GAFDNDEC_01513 1.8e-164 yegS 2.7.1.107 I Diacylglycerol kinase catalytic domain
GAFDNDEC_01514 3.5e-36
GAFDNDEC_01515 3.1e-14
GAFDNDEC_01516 6.5e-41 S transglycosylase associated protein
GAFDNDEC_01517 4.8e-29 S CsbD-like
GAFDNDEC_01518 9.4e-40
GAFDNDEC_01519 3.3e-280 pipD E Dipeptidase
GAFDNDEC_01520 1.8e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
GAFDNDEC_01521 1.1e-253 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
GAFDNDEC_01522 1e-170 2.5.1.74 H UbiA prenyltransferase family
GAFDNDEC_01523 1.4e-136 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 U Ion channel
GAFDNDEC_01524 3.9e-50
GAFDNDEC_01525 2.4e-43
GAFDNDEC_01526 2.1e-257 gabT 2.6.1.19, 5.1.1.21 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
GAFDNDEC_01527 1.4e-265 yfnA E Amino Acid
GAFDNDEC_01528 1.2e-149 yitU 3.1.3.104 S hydrolase
GAFDNDEC_01529 6.1e-268 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
GAFDNDEC_01530 3.5e-83 S Domain of unknown function (DUF4767)
GAFDNDEC_01532 2.5e-250 malT G Major Facilitator
GAFDNDEC_01533 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
GAFDNDEC_01534 1.1e-194 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
GAFDNDEC_01535 9.6e-197 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
GAFDNDEC_01536 7.6e-205 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
GAFDNDEC_01537 7.4e-175 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
GAFDNDEC_01538 4e-170 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
GAFDNDEC_01539 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
GAFDNDEC_01540 2.1e-72 ypmB S protein conserved in bacteria
GAFDNDEC_01541 4.3e-225 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
GAFDNDEC_01542 5.4e-258 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
GAFDNDEC_01543 1.3e-128 dnaD L Replication initiation and membrane attachment
GAFDNDEC_01545 7e-187 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GAFDNDEC_01546 7.7e-99 metI P ABC transporter permease
GAFDNDEC_01547 5.2e-156 metQ_4 P Belongs to the nlpA lipoprotein family
GAFDNDEC_01548 4.4e-83 uspA T Universal stress protein family
GAFDNDEC_01549 1.7e-301 ftpA P Binding-protein-dependent transport system inner membrane component
GAFDNDEC_01550 1.7e-182 ftpB P Bacterial extracellular solute-binding protein
GAFDNDEC_01551 2.3e-142 phnT 3.6.3.30 P ATPases associated with a variety of cellular activities
GAFDNDEC_01552 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
GAFDNDEC_01553 7.6e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
GAFDNDEC_01554 8.3e-110 ypsA S Belongs to the UPF0398 family
GAFDNDEC_01555 3.2e-56 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
GAFDNDEC_01557 4e-223 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
GAFDNDEC_01558 1e-144 yjfP S COG1073 Hydrolases of the alpha beta superfamily
GAFDNDEC_01559 1.2e-73 S SnoaL-like domain
GAFDNDEC_01560 1.1e-242 M Glycosyltransferase, group 2 family protein
GAFDNDEC_01561 5.1e-209 mccF V LD-carboxypeptidase
GAFDNDEC_01562 2.5e-78 K Acetyltransferase (GNAT) domain
GAFDNDEC_01563 6.9e-240 M hydrolase, family 25
GAFDNDEC_01564 1.6e-182 mccF 3.4.17.13 V LD-carboxypeptidase
GAFDNDEC_01565 2.2e-109
GAFDNDEC_01566 9.5e-121 3.6.3.35 P ATPases associated with a variety of cellular activities
GAFDNDEC_01567 5.1e-193
GAFDNDEC_01568 1.5e-146 S hydrolase activity, acting on ester bonds
GAFDNDEC_01569 1.1e-211 yurR 1.4.5.1 E FAD dependent oxidoreductase
GAFDNDEC_01570 2.2e-66 rnhA 3.1.26.4 L Ribonuclease HI
GAFDNDEC_01571 3.3e-62 esbA S Family of unknown function (DUF5322)
GAFDNDEC_01572 4.1e-295 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
GAFDNDEC_01573 4.4e-74 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GAFDNDEC_01574 2e-174 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GAFDNDEC_01575 3.3e-89 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GAFDNDEC_01576 8.1e-207 carA 6.3.5.5 F Belongs to the CarA family
GAFDNDEC_01577 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
GAFDNDEC_01578 4e-288 S Bacterial membrane protein, YfhO
GAFDNDEC_01579 6.4e-113 pgm5 G Phosphoglycerate mutase family
GAFDNDEC_01580 5.8e-70 frataxin S Domain of unknown function (DU1801)
GAFDNDEC_01582 5.5e-67 cat 2.3.1.28 V Chloramphenicol acetyltransferase
GAFDNDEC_01583 9.8e-45 cat 2.3.1.28 V Chloramphenicol acetyltransferase
GAFDNDEC_01584 3.5e-69 S LuxR family transcriptional regulator
GAFDNDEC_01585 3.6e-134 S Uncharacterized protein conserved in bacteria (DUF2087)
GAFDNDEC_01587 9.7e-91 3.6.1.55 F NUDIX domain
GAFDNDEC_01588 3.9e-162 V ABC transporter, ATP-binding protein
GAFDNDEC_01589 5.1e-131 S ABC-2 family transporter protein
GAFDNDEC_01590 0.0 FbpA K Fibronectin-binding protein
GAFDNDEC_01591 1.9e-66 K Transcriptional regulator
GAFDNDEC_01592 7e-161 degV S EDD domain protein, DegV family
GAFDNDEC_01593 3.3e-74 yjcF 3.5.4.33, 4.4.1.8 K protein acetylation
GAFDNDEC_01594 6e-121 S Protein of unknown function (DUF975)
GAFDNDEC_01595 1.3e-09
GAFDNDEC_01596 1.4e-49
GAFDNDEC_01597 3.3e-149 2.7.7.12 C Domain of unknown function (DUF4931)
GAFDNDEC_01598 1.1e-209 pmrB EGP Major facilitator Superfamily
GAFDNDEC_01599 4.6e-12
GAFDNDEC_01600 6.2e-51 XK27_08430 S Staphylococcal protein of unknown function (DUF960)
GAFDNDEC_01601 4.6e-129 yejC S Protein of unknown function (DUF1003)
GAFDNDEC_01602 2.5e-134 XK27_00890 S Domain of unknown function (DUF368)
GAFDNDEC_01603 2.1e-244 cycA E Amino acid permease
GAFDNDEC_01604 1.9e-113
GAFDNDEC_01605 3.5e-58
GAFDNDEC_01606 3.1e-279 lldP C L-lactate permease
GAFDNDEC_01607 1.5e-226
GAFDNDEC_01608 3.7e-128 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the transfer of the cytidylyl group of CTP to D-ribitol 5-phosphate
GAFDNDEC_01609 1.2e-191 tarJ 1.1.1.137, 1.1.1.303, 1.1.1.4, 1.1.1.405 E Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate
GAFDNDEC_01610 8.6e-196 tarK 2.7.8.14, 2.7.8.47 H CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
GAFDNDEC_01611 0.0 tarL 2.7.8.14, 2.7.8.47 H CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
GAFDNDEC_01612 1.2e-91 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
GAFDNDEC_01613 1.8e-72 mgrA K helix_turn_helix multiple antibiotic resistance protein
GAFDNDEC_01614 5.9e-228 gshR1 1.8.1.7 C Glutathione reductase
GAFDNDEC_01615 2.1e-51
GAFDNDEC_01616 3.1e-212 M Glycosyl transferase family group 2
GAFDNDEC_01617 2.4e-273 GT89 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
GAFDNDEC_01618 1.6e-157 xerD L Phage integrase, N-terminal SAM-like domain
GAFDNDEC_01620 1.1e-13 hol S COG5546 Small integral membrane protein
GAFDNDEC_01621 2e-29 S Haemolysin XhlA
GAFDNDEC_01622 2.6e-175 3.5.1.28 M Glycosyl hydrolases family 25
GAFDNDEC_01623 9.1e-54
GAFDNDEC_01625 4.2e-191
GAFDNDEC_01626 6.9e-291 S Phage minor structural protein
GAFDNDEC_01627 6.9e-211 S Phage tail protein
GAFDNDEC_01628 0.0 D NLP P60 protein
GAFDNDEC_01629 1.9e-23
GAFDNDEC_01630 3.5e-56 S Phage tail assembly chaperone proteins, TAC
GAFDNDEC_01631 6.1e-109 S Phage tail tube protein
GAFDNDEC_01632 2.2e-58 S Protein of unknown function (DUF806)
GAFDNDEC_01633 8.6e-69 S Bacteriophage HK97-gp10, putative tail-component
GAFDNDEC_01634 2.7e-55 S Phage head-tail joining protein
GAFDNDEC_01635 1.7e-31
GAFDNDEC_01636 7.9e-69 S Phage capsid family
GAFDNDEC_01637 1.8e-135 S Phage portal protein
GAFDNDEC_01639 4e-217 S Phage Terminase
GAFDNDEC_01640 1.2e-26 L Phage terminase, small subunit
GAFDNDEC_01645 1.8e-42 V HNH nucleases
GAFDNDEC_01646 3e-15
GAFDNDEC_01648 5.4e-11 S HNH endonuclease
GAFDNDEC_01649 2.9e-87 L COG2801 Transposase and inactivated derivatives
GAFDNDEC_01650 6e-57 L Transposase
GAFDNDEC_01651 7.3e-311 1.3.99.33 C FAD binding domain
GAFDNDEC_01652 4.6e-243 2.7.13.3 T Histidine kinase
GAFDNDEC_01653 3.2e-117 K helix_turn_helix, arabinose operon control protein
GAFDNDEC_01654 1.1e-211 S Bacterial protein of unknown function (DUF871)
GAFDNDEC_01655 1.9e-156 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
GAFDNDEC_01656 1.1e-164 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
GAFDNDEC_01657 1.8e-248 pts29C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GAFDNDEC_01658 2.3e-133 K UTRA domain
GAFDNDEC_01659 9.9e-154 estA S Putative esterase
GAFDNDEC_01660 7.6e-64
GAFDNDEC_01661 6.7e-210 ydiN G Major Facilitator Superfamily
GAFDNDEC_01662 3.4e-163 K Transcriptional regulator, LysR family
GAFDNDEC_01663 4.2e-169 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
GAFDNDEC_01664 1.2e-214 ydiM G Transporter
GAFDNDEC_01665 2.5e-130 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
GAFDNDEC_01666 5e-176 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GAFDNDEC_01667 0.0 1.3.5.4 C FAD binding domain
GAFDNDEC_01669 3.8e-11 S RDD family
GAFDNDEC_01671 1.8e-235 ycjT 2.4.1.230 GH65 G Glycosyl hydrolase family 65, C-terminal domain
GAFDNDEC_01672 6.9e-157 msmE G Bacterial extracellular solute-binding protein
GAFDNDEC_01673 2.3e-125 G Binding-protein-dependent transport system inner membrane component
GAFDNDEC_01674 1.5e-128 G Binding-protein-dependent transport system inner membrane component
GAFDNDEC_01675 5.7e-85 5.1.1.1 K helix_turn _helix lactose operon repressor
GAFDNDEC_01676 1.3e-154 msmK P Belongs to the ABC transporter superfamily
GAFDNDEC_01677 1.5e-64 S pyridoxamine 5-phosphate
GAFDNDEC_01678 7.4e-194 C Aldo keto reductase family protein
GAFDNDEC_01679 1.3e-71 L Transposase
GAFDNDEC_01680 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
GAFDNDEC_01681 3.7e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GAFDNDEC_01682 9.2e-270 glnPH2 P ABC transporter permease
GAFDNDEC_01683 4.3e-22
GAFDNDEC_01684 9.9e-73 S Iron-sulphur cluster biosynthesis
GAFDNDEC_01685 2.2e-49 MA20_27270 S mazG nucleotide pyrophosphohydrolase
GAFDNDEC_01686 5.1e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
GAFDNDEC_01687 3.3e-236 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GAFDNDEC_01688 1.4e-213 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
GAFDNDEC_01689 6.1e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GAFDNDEC_01690 1.1e-159 S Tetratricopeptide repeat
GAFDNDEC_01691 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GAFDNDEC_01692 6.2e-157 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GAFDNDEC_01693 2.4e-191 mdtG EGP Major Facilitator Superfamily
GAFDNDEC_01694 6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GAFDNDEC_01695 1.5e-34 rpsT J Binds directly to 16S ribosomal RNA
GAFDNDEC_01696 1.1e-187 holA 2.7.7.7 L DNA polymerase III delta subunit
GAFDNDEC_01697 0.0 comEC S Competence protein ComEC
GAFDNDEC_01698 6.4e-79 comEB 3.5.4.12 F ComE operon protein 2
GAFDNDEC_01699 2e-121 comEA L Competence protein ComEA
GAFDNDEC_01700 1.6e-196 ylbL T Belongs to the peptidase S16 family
GAFDNDEC_01701 1.4e-84 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GAFDNDEC_01702 1.1e-101 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
GAFDNDEC_01703 3.3e-49 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
GAFDNDEC_01704 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
GAFDNDEC_01705 1.6e-205 ftsW D Belongs to the SEDS family
GAFDNDEC_01707 2.9e-214
GAFDNDEC_01708 2.3e-69 ica2 GT2 M Glycosyl transferase family group 2
GAFDNDEC_01709 7.4e-247 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
GAFDNDEC_01710 4e-253 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GAFDNDEC_01711 5.1e-184 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GAFDNDEC_01712 4.4e-146 ptp2 3.1.3.48 T Tyrosine phosphatase family
GAFDNDEC_01713 4.8e-279 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GAFDNDEC_01715 4.3e-83
GAFDNDEC_01716 1.5e-256 yhdG E C-terminus of AA_permease
GAFDNDEC_01718 0.0 kup P Transport of potassium into the cell
GAFDNDEC_01719 4.6e-166 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GAFDNDEC_01720 3.1e-179 K AI-2E family transporter
GAFDNDEC_01721 7.6e-216 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
GAFDNDEC_01722 1.7e-58 qacC P Small Multidrug Resistance protein
GAFDNDEC_01723 1.1e-44 qacH U Small Multidrug Resistance protein
GAFDNDEC_01724 3e-116 hly S protein, hemolysin III
GAFDNDEC_01725 5.1e-54 nmtR K helix_turn_helix, Arsenical Resistance Operon Repressor
GAFDNDEC_01726 2.7e-160 czcD P cation diffusion facilitator family transporter
GAFDNDEC_01727 7.8e-103 K Helix-turn-helix XRE-family like proteins
GAFDNDEC_01729 8e-21
GAFDNDEC_01730 2.5e-95 tag 3.2.2.20 L glycosylase
GAFDNDEC_01731 3.6e-213 folP 2.5.1.15 H dihydropteroate synthase
GAFDNDEC_01732 2.1e-100 xtp 2.5.1.15, 3.6.1.66 F Ham1 family
GAFDNDEC_01733 1.6e-247 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
GAFDNDEC_01734 2.6e-103 folE 2.7.6.3, 3.5.4.16 F GTP cyclohydrolase 1
GAFDNDEC_01735 2.8e-93 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
GAFDNDEC_01736 2.2e-63 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
GAFDNDEC_01737 4.7e-83 cvpA S Colicin V production protein
GAFDNDEC_01738 2e-169 znuA P Belongs to the bacterial solute-binding protein 9 family
GAFDNDEC_01739 3.8e-249 EGP Major facilitator Superfamily
GAFDNDEC_01741 1.3e-38
GAFDNDEC_01742 1.8e-169 scrK 2.7.1.2, 2.7.1.4 GK ROK family
GAFDNDEC_01743 0.0 rafA 3.2.1.22 G alpha-galactosidase
GAFDNDEC_01744 0.0 scrA 2.7.1.193, 2.7.1.211, 5.3.1.1 G phosphotransferase system
GAFDNDEC_01745 2.1e-301 scrB 3.2.1.26 GH32 G invertase
GAFDNDEC_01746 2e-172 scrR K Transcriptional regulator, LacI family
GAFDNDEC_01747 0.0 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
GAFDNDEC_01748 1.4e-162 3.5.1.10 C nadph quinone reductase
GAFDNDEC_01749 1.1e-217 nhaC C Na H antiporter NhaC
GAFDNDEC_01750 0.0 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
GAFDNDEC_01751 7.7e-166 mleR K LysR substrate binding domain
GAFDNDEC_01752 0.0 3.6.4.13 M domain protein
GAFDNDEC_01754 2.1e-157 hipB K Helix-turn-helix
GAFDNDEC_01755 0.0 oppA E ABC transporter, substratebinding protein
GAFDNDEC_01756 1.8e-309 oppA E ABC transporter, substratebinding protein
GAFDNDEC_01757 2.6e-79 yiaC K Acetyltransferase (GNAT) domain
GAFDNDEC_01758 2.3e-215 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GAFDNDEC_01759 7e-203 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
GAFDNDEC_01760 3e-113 pgm1 G phosphoglycerate mutase
GAFDNDEC_01761 1e-179 yghZ C Aldo keto reductase family protein
GAFDNDEC_01762 6e-57 L Transposase
GAFDNDEC_01763 3.7e-177 ica2 GT2 M Glycosyl transferase family group 2
GAFDNDEC_01764 7.9e-103
GAFDNDEC_01765 9.3e-197
GAFDNDEC_01766 0.0 typA T GTP-binding protein TypA
GAFDNDEC_01767 6.3e-137 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
GAFDNDEC_01768 1.2e-45 yktA S Belongs to the UPF0223 family
GAFDNDEC_01769 4.7e-163 1.1.1.27 C L-malate dehydrogenase activity
GAFDNDEC_01770 1.2e-266 lpdA 1.8.1.4 C Dehydrogenase
GAFDNDEC_01771 1.8e-208 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
GAFDNDEC_01772 4.5e-180 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
GAFDNDEC_01773 1.6e-210 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
GAFDNDEC_01774 3.1e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GAFDNDEC_01775 1.6e-85
GAFDNDEC_01776 3.1e-33 ykzG S Belongs to the UPF0356 family
GAFDNDEC_01777 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GAFDNDEC_01778 5.7e-188 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
GAFDNDEC_01779 1.7e-28
GAFDNDEC_01780 2.6e-107 mltD CBM50 M NlpC P60 family protein
GAFDNDEC_01781 4.4e-172 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GAFDNDEC_01782 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
GAFDNDEC_01783 1.6e-120 S Repeat protein
GAFDNDEC_01784 5.5e-121 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
GAFDNDEC_01785 3.8e-268 N domain, Protein
GAFDNDEC_01786 8e-185 S Bacterial protein of unknown function (DUF916)
GAFDNDEC_01787 1.6e-39 L Transposase
GAFDNDEC_01788 3.6e-282 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
GAFDNDEC_01789 0.0 pepN 3.4.11.2 E aminopeptidase
GAFDNDEC_01790 1.1e-101 G Glycogen debranching enzyme
GAFDNDEC_01791 9e-48 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
GAFDNDEC_01792 7.9e-156 yjdB S Domain of unknown function (DUF4767)
GAFDNDEC_01793 1.1e-147 Q Fumarylacetoacetate (FAA) hydrolase family
GAFDNDEC_01794 5.3e-72 asp2 S Asp23 family, cell envelope-related function
GAFDNDEC_01795 8.7e-72 asp S Asp23 family, cell envelope-related function
GAFDNDEC_01796 7.2e-23
GAFDNDEC_01797 2.6e-84
GAFDNDEC_01798 7.1e-37 S Transglycosylase associated protein
GAFDNDEC_01799 0.0 XK27_09800 I Acyltransferase family
GAFDNDEC_01800 7.4e-38 S MORN repeat
GAFDNDEC_01801 1.7e-132 S Cysteine-rich secretory protein family
GAFDNDEC_01802 1.1e-116 XK27_07075 V CAAX protease self-immunity
GAFDNDEC_01803 0.0 L AAA domain
GAFDNDEC_01804 4.9e-63 K Helix-turn-helix XRE-family like proteins
GAFDNDEC_01805 6.2e-50
GAFDNDEC_01806 1.1e-302 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
GAFDNDEC_01807 1.2e-179 coaA 2.7.1.33 F Pantothenic acid kinase
GAFDNDEC_01808 1.1e-164 fabK 1.3.1.9 S Nitronate monooxygenase
GAFDNDEC_01809 0.0 helD 3.6.4.12 L DNA helicase
GAFDNDEC_01810 2.2e-58 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GAFDNDEC_01811 4.7e-134 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GAFDNDEC_01812 0.0 glpD 1.1.3.21, 1.1.5.3 C C-terminal domain of alpha-glycerophosphate oxidase
GAFDNDEC_01813 3e-300 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
GAFDNDEC_01814 2.9e-254 gshR 1.8.1.7 C Pyridine nucleotide-disulphide oxidoreductase
GAFDNDEC_01815 8.4e-179 proV E ABC transporter, ATP-binding protein
GAFDNDEC_01816 5.2e-276 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
GAFDNDEC_01817 1.6e-76 3.1.26.4 L RNA-DNA hybrid ribonuclease activity
GAFDNDEC_01818 0.0
GAFDNDEC_01819 6.6e-162 vdlC S Belongs to the short-chain dehydrogenases reductases (SDR) family
GAFDNDEC_01820 7.7e-174 rihC 3.2.2.1 F Nucleoside
GAFDNDEC_01821 9.3e-69 accB 2.3.1.12 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
GAFDNDEC_01822 9.3e-80
GAFDNDEC_01823 2.1e-82 ywnA K Winged helix-turn-helix transcription repressor, HrcA DNA-binding
GAFDNDEC_01824 1.1e-231 flhF N Uncharacterized conserved protein (DUF2075)
GAFDNDEC_01825 8.8e-95 yxkA S Phosphatidylethanolamine-binding protein
GAFDNDEC_01826 5.4e-54 ypaA S Protein of unknown function (DUF1304)
GAFDNDEC_01827 1.6e-309 mco Q Multicopper oxidase
GAFDNDEC_01828 2.7e-120 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
GAFDNDEC_01829 6.3e-102 zmp1 O Zinc-dependent metalloprotease
GAFDNDEC_01830 3.7e-44
GAFDNDEC_01831 5.4e-178 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
GAFDNDEC_01832 1.2e-241 amtB P ammonium transporter
GAFDNDEC_01833 3.5e-258 P Major Facilitator Superfamily
GAFDNDEC_01834 8.3e-85 K Transcriptional regulator PadR-like family
GAFDNDEC_01835 4.2e-175 corA P CorA-like Mg2+ transporter protein
GAFDNDEC_01836 1.9e-62 S Protein of unknown function (DUF3397)
GAFDNDEC_01837 1.9e-77 mraZ K Belongs to the MraZ family
GAFDNDEC_01838 5.5e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
GAFDNDEC_01839 7.5e-54 ftsL D Cell division protein FtsL
GAFDNDEC_01840 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
GAFDNDEC_01841 8.3e-179 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GAFDNDEC_01842 1.2e-260 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GAFDNDEC_01843 2.6e-197 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GAFDNDEC_01844 5.8e-163 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
GAFDNDEC_01845 5.5e-245 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
GAFDNDEC_01846 1.4e-229 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GAFDNDEC_01847 3.3e-71 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
GAFDNDEC_01848 1.2e-36 yggT S YGGT family
GAFDNDEC_01849 3.4e-146 ylmH S S4 domain protein
GAFDNDEC_01850 3.5e-86 divIVA D DivIVA domain protein
GAFDNDEC_01851 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GAFDNDEC_01852 5.4e-189 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
GAFDNDEC_01853 1.9e-95 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
GAFDNDEC_01854 4.6e-28
GAFDNDEC_01855 3.9e-122 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GAFDNDEC_01856 7.1e-217 iscS 2.8.1.7 E Aminotransferase class V
GAFDNDEC_01857 4.9e-57 XK27_04120 S Putative amino acid metabolism
GAFDNDEC_01858 1e-223 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
GAFDNDEC_01859 1.3e-241 ktrB P Potassium uptake protein
GAFDNDEC_01860 2.6e-115 ktrA P domain protein
GAFDNDEC_01861 2.3e-120 N WxL domain surface cell wall-binding
GAFDNDEC_01862 2.9e-87 L COG2801 Transposase and inactivated derivatives
GAFDNDEC_01868 9.2e-61 S ORF6C domain
GAFDNDEC_01870 6.1e-25 ps115 K Helix-turn-helix XRE-family like proteins
GAFDNDEC_01871 1.5e-36 S Pfam:Peptidase_M78
GAFDNDEC_01875 7.7e-33 S Phage integrase family
GAFDNDEC_01876 4.4e-20 int L Belongs to the 'phage' integrase family
GAFDNDEC_01877 3.6e-31
GAFDNDEC_01878 3e-122 Q Methyltransferase
GAFDNDEC_01879 8.5e-57 ybjQ S Belongs to the UPF0145 family
GAFDNDEC_01880 2.1e-211 EGP Major facilitator Superfamily
GAFDNDEC_01881 1.5e-103 K Helix-turn-helix domain
GAFDNDEC_01882 2.9e-93 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GAFDNDEC_01883 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
GAFDNDEC_01884 2e-50 yrvD S Lipopolysaccharide assembly protein A domain
GAFDNDEC_01885 4.8e-140 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
GAFDNDEC_01886 2.8e-179 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
GAFDNDEC_01887 3.2e-46
GAFDNDEC_01888 2.4e-245 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GAFDNDEC_01889 4.4e-135 fruR K DeoR C terminal sensor domain
GAFDNDEC_01890 1.4e-170 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
GAFDNDEC_01891 1.1e-291 fruA 2.7.1.194, 2.7.1.200, 2.7.1.202 GT Phosphotransferase System
GAFDNDEC_01892 2.3e-60 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GAFDNDEC_01893 2.9e-87 L COG2801 Transposase and inactivated derivatives
GAFDNDEC_01894 7.4e-67 L Putative transposase of IS4/5 family (DUF4096)
GAFDNDEC_01895 1.9e-74 L Transposase DDE domain
GAFDNDEC_01896 6.7e-173 ybfG M peptidoglycan-binding domain-containing protein
GAFDNDEC_01898 4.6e-59 norB EGP Major Facilitator
GAFDNDEC_01899 2.1e-58 S Family of unknown function (DUF5388)
GAFDNDEC_01900 7.8e-146 D CobQ CobB MinD ParA nucleotide binding domain protein
GAFDNDEC_01902 8.9e-50 repA S Replication initiator protein A
GAFDNDEC_01903 1.1e-43 relB L Addiction module antitoxin, RelB DinJ family
GAFDNDEC_01904 1.8e-79
GAFDNDEC_01905 3.1e-41
GAFDNDEC_01906 9.4e-27
GAFDNDEC_01907 0.0 L MobA MobL family protein
GAFDNDEC_01908 3e-41 traI 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
GAFDNDEC_01909 5.6e-220 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
GAFDNDEC_01910 1.5e-32
GAFDNDEC_01911 8.2e-194 L Psort location Cytoplasmic, score
GAFDNDEC_01912 3.9e-64 cdr P Pyridine nucleotide-disulphide oxidoreductase
GAFDNDEC_01913 8.3e-62 cdr P Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
GAFDNDEC_01914 2.5e-32 arsR K helix_turn_helix, Arsenical Resistance Operon Repressor
GAFDNDEC_01915 6.1e-177 arsB U Involved in arsenical resistance. Thought to form the channel of an arsenite pump
GAFDNDEC_01916 9.7e-132 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GAFDNDEC_01917 1.3e-157 yihY S Belongs to the UPF0761 family
GAFDNDEC_01918 9.9e-208 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
GAFDNDEC_01919 1.2e-219 pbpX1 V Beta-lactamase
GAFDNDEC_01920 1.7e-254 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
GAFDNDEC_01921 5e-107
GAFDNDEC_01922 1.3e-73
GAFDNDEC_01924 2.1e-137 S Alpha/beta hydrolase of unknown function (DUF915)
GAFDNDEC_01925 4.5e-222 pts14C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GAFDNDEC_01926 2.3e-75 T Universal stress protein family
GAFDNDEC_01928 1.5e-239 yfmL 3.6.4.13 L DEAD DEAH box helicase
GAFDNDEC_01929 8.4e-190 mocA S Oxidoreductase
GAFDNDEC_01930 2.7e-31 cspA K 'Cold-shock' DNA-binding domain
GAFDNDEC_01931 1.1e-62 S Domain of unknown function (DUF4828)
GAFDNDEC_01932 1.1e-144 lys M Glycosyl hydrolases family 25
GAFDNDEC_01933 2.3e-151 gntR K rpiR family
GAFDNDEC_01934 6.1e-168 S Alpha/beta hydrolase of unknown function (DUF915)
GAFDNDEC_01935 4e-240 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GAFDNDEC_01936 0.0 yfgQ P E1-E2 ATPase
GAFDNDEC_01937 2.1e-100 yobS K Bacterial regulatory proteins, tetR family
GAFDNDEC_01938 4.4e-258 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GAFDNDEC_01939 1e-190 yegS 2.7.1.107 G Lipid kinase
GAFDNDEC_01940 7.7e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GAFDNDEC_01941 1.2e-274 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
GAFDNDEC_01942 3.2e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GAFDNDEC_01943 2.2e-197 camS S sex pheromone
GAFDNDEC_01944 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GAFDNDEC_01945 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
GAFDNDEC_01946 1.3e-218 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
GAFDNDEC_01947 4e-93 S UPF0316 protein
GAFDNDEC_01948 9.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
GAFDNDEC_01949 9e-113 acmA 3.2.1.17 NU mannosyl-glycoprotein
GAFDNDEC_01950 9.6e-183 S Oxidoreductase family, NAD-binding Rossmann fold
GAFDNDEC_01951 2.9e-165 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
GAFDNDEC_01952 2.4e-182 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GAFDNDEC_01953 5.3e-157 ddpX 3.4.13.22 S L,D-transpeptidase catalytic domain
GAFDNDEC_01954 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
GAFDNDEC_01955 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
GAFDNDEC_01956 2.6e-183 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
GAFDNDEC_01957 6e-274 cydA 1.10.3.14 C ubiquinol oxidase
GAFDNDEC_01958 0.0 S Alpha beta
GAFDNDEC_01959 1.8e-23
GAFDNDEC_01960 1.1e-98 S ECF transporter, substrate-specific component
GAFDNDEC_01961 5.8e-253 yfnA E Amino Acid
GAFDNDEC_01962 4.8e-166 mleP S Sodium Bile acid symporter family
GAFDNDEC_01963 4.2e-308 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
GAFDNDEC_01964 7.6e-166 mleR K LysR family
GAFDNDEC_01965 4.9e-162 mleR K LysR family transcriptional regulator
GAFDNDEC_01966 1.2e-94 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
GAFDNDEC_01967 2.7e-263 frdC 1.3.5.4 C FAD binding domain
GAFDNDEC_01968 1.1e-256 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
GAFDNDEC_01969 7.8e-288 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
GAFDNDEC_01970 5.5e-164 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
GAFDNDEC_01971 9e-44 citD C Covalent carrier of the coenzyme of citrate lyase
GAFDNDEC_01972 9.7e-189 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
GAFDNDEC_01973 1.1e-206 mez_1 1.1.1.38 C Malic enzyme, NAD binding domain
GAFDNDEC_01974 2.9e-179 citR K sugar-binding domain protein
GAFDNDEC_01975 8.3e-260 citP P Sodium:sulfate symporter transmembrane region
GAFDNDEC_01976 1.2e-166 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
GAFDNDEC_01977 3.1e-50
GAFDNDEC_01978 4.6e-174 sitA P Belongs to the bacterial solute-binding protein 9 family
GAFDNDEC_01979 4.8e-141 mtsB U ABC 3 transport family
GAFDNDEC_01980 6.4e-131 mntB 3.6.3.35 P ABC transporter
GAFDNDEC_01981 1.4e-153 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
GAFDNDEC_01982 1.3e-198 K Helix-turn-helix domain
GAFDNDEC_01983 1.3e-176 ttdA 4.2.1.32 C Fumarate hydratase (Fumerase)
GAFDNDEC_01984 4.1e-115 ttdB 4.2.1.2, 4.2.1.32 C Catalyzes the reversible hydration of fumarate to (S)- malate
GAFDNDEC_01985 4.1e-53 yitW S Iron-sulfur cluster assembly protein
GAFDNDEC_01986 1.6e-219 P Sodium:sulfate symporter transmembrane region
GAFDNDEC_01987 4.9e-196 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
GAFDNDEC_01988 4e-184 aroF 2.5.1.54 E DAHP synthetase I family
GAFDNDEC_01989 9.1e-164 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
GAFDNDEC_01990 0.0 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
GAFDNDEC_01991 2.9e-204 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
GAFDNDEC_01992 1.5e-181 ywhK S Membrane
GAFDNDEC_01993 1.7e-162 degV S Uncharacterised protein, DegV family COG1307
GAFDNDEC_01994 1.9e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
GAFDNDEC_01995 1.3e-78 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GAFDNDEC_01996 3.9e-150 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
GAFDNDEC_01997 5.2e-142 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GAFDNDEC_01998 8.2e-165 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GAFDNDEC_01999 1.4e-153 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GAFDNDEC_02000 1.5e-208 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GAFDNDEC_02001 3.5e-142 cad S FMN_bind
GAFDNDEC_02002 0.0 ndh 1.6.99.3 C NADH dehydrogenase
GAFDNDEC_02003 1.4e-86 ynhH S NusG domain II
GAFDNDEC_02004 1.7e-94 gerCA 2.5.1.30 S Heptaprenyl diphosphate synthase component I
GAFDNDEC_02005 1.4e-181 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GAFDNDEC_02006 2.1e-61 rplQ J Ribosomal protein L17
GAFDNDEC_02007 7.4e-172 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GAFDNDEC_02008 3.4e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GAFDNDEC_02009 1.1e-59 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GAFDNDEC_02010 3.1e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GAFDNDEC_02011 2.1e-125 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
GAFDNDEC_02012 1.5e-236 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
GAFDNDEC_02013 6.3e-70 rplO J Binds to the 23S rRNA
GAFDNDEC_02014 2.2e-24 rpmD J Ribosomal protein L30
GAFDNDEC_02015 6.8e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GAFDNDEC_02016 3.3e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GAFDNDEC_02017 3.5e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GAFDNDEC_02018 1e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GAFDNDEC_02019 3.2e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GAFDNDEC_02020 2.4e-50 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GAFDNDEC_02021 4.3e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GAFDNDEC_02022 2.5e-40 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GAFDNDEC_02023 1.4e-24 rpmC J Belongs to the universal ribosomal protein uL29 family
GAFDNDEC_02024 9.2e-77 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GAFDNDEC_02025 2.1e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GAFDNDEC_02026 2.8e-52 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GAFDNDEC_02027 8.2e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GAFDNDEC_02028 8.1e-146 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GAFDNDEC_02029 1.8e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
GAFDNDEC_02030 5.5e-107 rplD J Forms part of the polypeptide exit tunnel
GAFDNDEC_02031 4.4e-112 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GAFDNDEC_02032 2.6e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
GAFDNDEC_02033 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GAFDNDEC_02034 5.5e-83 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
GAFDNDEC_02035 3.6e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GAFDNDEC_02036 2.7e-115 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
GAFDNDEC_02037 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GAFDNDEC_02038 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GAFDNDEC_02039 1.5e-109 K Bacterial regulatory proteins, tetR family
GAFDNDEC_02040 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GAFDNDEC_02041 6.9e-78 ctsR K Belongs to the CtsR family
GAFDNDEC_02042 3.1e-56 tnp2PF3 L Transposase DDE domain
GAFDNDEC_02043 1e-53 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
GAFDNDEC_02044 0.0 cadA 3.6.3.3, 3.6.3.5 P Cadmium transporter
GAFDNDEC_02045 2.7e-53 K helix_turn_helix, Arsenical Resistance Operon Repressor
GAFDNDEC_02046 1.3e-88 L Transposase and inactivated derivatives, IS30 family
GAFDNDEC_02047 3.1e-86 L Transposase and inactivated derivatives, IS30 family
GAFDNDEC_02049 1.1e-54 L recombinase activity
GAFDNDEC_02050 0.0 L Transposase
GAFDNDEC_02051 2.6e-61 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GAFDNDEC_02052 7.3e-224 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
GAFDNDEC_02053 7.2e-100 tnp L DDE domain
GAFDNDEC_02054 8.4e-70 nrdI F NrdI Flavodoxin like
GAFDNDEC_02055 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GAFDNDEC_02056 4.1e-159 nrdF 1.17.4.1 F Ribonucleotide reductase, small chain
GAFDNDEC_02057 9.4e-175 1.17.4.1 F Ribonucleotide reductase, small chain
GAFDNDEC_02058 1.2e-45 K Bacterial regulatory proteins, tetR family
GAFDNDEC_02059 2e-74 K helix_turn_helix, mercury resistance
GAFDNDEC_02060 4.4e-186 1.1.1.219 GM Male sterility protein
GAFDNDEC_02061 8.3e-281 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GAFDNDEC_02062 2.7e-269 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GAFDNDEC_02063 7e-53 ptcB 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
GAFDNDEC_02064 2.6e-74 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GAFDNDEC_02065 3.4e-149 dicA K Helix-turn-helix domain
GAFDNDEC_02066 3.2e-55
GAFDNDEC_02067 3.4e-160 T Calcineurin-like phosphoesterase superfamily domain
GAFDNDEC_02068 7.4e-64
GAFDNDEC_02069 0.0 P Concanavalin A-like lectin/glucanases superfamily
GAFDNDEC_02070 0.0 yhcA V ABC transporter, ATP-binding protein
GAFDNDEC_02071 4.4e-95 cadD P Cadmium resistance transporter
GAFDNDEC_02072 1e-48 K Transcriptional regulator, ArsR family
GAFDNDEC_02073 3.2e-116 S SNARE associated Golgi protein
GAFDNDEC_02074 1.1e-46
GAFDNDEC_02075 6.8e-72 T Belongs to the universal stress protein A family
GAFDNDEC_02076 9.9e-52 mntH P H( )-stimulated, divalent metal cation uptake system
GAFDNDEC_02077 6e-57 L Transposase
GAFDNDEC_02078 3.2e-214 glf 5.4.99.9 M UDP-galactopyranose mutase
GAFDNDEC_02079 1.8e-150 rfbX S Membrane protein involved in the export of O-antigen and teichoic acid
GAFDNDEC_02080 5.2e-15 cps3D
GAFDNDEC_02082 1.2e-30 cps3F
GAFDNDEC_02083 7.7e-139 rgpAc GT4 M Domain of unknown function (DUF1972)
GAFDNDEC_02084 4e-103 wcoF M Glycosyl transferases group 1
GAFDNDEC_02085 1.2e-49 rgpB GT2 M Glycosyltransferase, group 2 family protein
GAFDNDEC_02086 7.5e-70 1.1.1.133 S Glycosyltransferase like family 2
GAFDNDEC_02087 6.8e-42 3.2.1.26, 3.2.1.65 GH32 G Belongs to the glycosyl hydrolase 32 family
GAFDNDEC_02088 1.3e-47 cps3I G Acyltransferase family
GAFDNDEC_02089 3.2e-20 S GDSL-like Lipase/Acylhydrolase
GAFDNDEC_02090 5.8e-147 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
GAFDNDEC_02091 1.3e-107 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
GAFDNDEC_02092 1.9e-205 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
GAFDNDEC_02093 5.1e-156 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
GAFDNDEC_02094 4.9e-86 L Integrase
GAFDNDEC_02095 2.9e-87 L COG2801 Transposase and inactivated derivatives
GAFDNDEC_02096 5.9e-133 2.7.1.89 M Phosphotransferase enzyme family
GAFDNDEC_02097 1.1e-95 2.3.1.128 J Acetyltransferase (GNAT) domain
GAFDNDEC_02098 3.5e-97 speG J Acetyltransferase (GNAT) domain
GAFDNDEC_02099 4.1e-138 endA F DNA RNA non-specific endonuclease
GAFDNDEC_02100 1.4e-53 K helix_turn_helix, Arsenical Resistance Operon Repressor
GAFDNDEC_02101 2.4e-110 K Transcriptional regulator (TetR family)
GAFDNDEC_02102 7.8e-261 yhgE V domain protein
GAFDNDEC_02103 6.1e-09
GAFDNDEC_02106 4.1e-184 EGP Major facilitator Superfamily
GAFDNDEC_02107 0.0 mdlA V ABC transporter
GAFDNDEC_02108 0.0 mdlB V ABC transporter
GAFDNDEC_02110 5.1e-66 C Aldo/keto reductase family
GAFDNDEC_02111 9.3e-127 K Helix-turn-helix domain, rpiR family
GAFDNDEC_02112 1.1e-158 S Alpha beta hydrolase
GAFDNDEC_02113 1.4e-113 GM NmrA-like family
GAFDNDEC_02114 9.8e-79 S Uncharacterized protein conserved in bacteria (DUF2255)
GAFDNDEC_02115 6.7e-159 K Transcriptional regulator
GAFDNDEC_02116 1.3e-171 C nadph quinone reductase
GAFDNDEC_02117 2.8e-14 S Alpha beta hydrolase
GAFDNDEC_02118 9.7e-269 nox C Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
GAFDNDEC_02119 1.2e-103 desR K helix_turn_helix, Lux Regulon
GAFDNDEC_02120 1e-201 desK 2.7.13.3 T Histidine kinase
GAFDNDEC_02121 4.5e-135 yvfS V ABC-2 type transporter
GAFDNDEC_02122 3.7e-157 yvfR V ABC transporter
GAFDNDEC_02123 6e-82 K Acetyltransferase (GNAT) domain
GAFDNDEC_02124 2.1e-73 K MarR family
GAFDNDEC_02125 3.8e-114 S Psort location CytoplasmicMembrane, score
GAFDNDEC_02126 2.6e-12 yjdF S Protein of unknown function (DUF2992)
GAFDNDEC_02127 1.7e-94 V ABC transporter, ATP-binding protein
GAFDNDEC_02128 1.6e-61 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GAFDNDEC_02136 4.1e-218 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GAFDNDEC_02137 2.5e-115 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
GAFDNDEC_02138 2.5e-114 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
GAFDNDEC_02139 1.5e-264 lysP E amino acid
GAFDNDEC_02140 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
GAFDNDEC_02141 4.2e-92 K Transcriptional regulator
GAFDNDEC_02142 8.2e-99 2.3.1.128 J Acetyltransferase (GNAT) domain
GAFDNDEC_02143 2e-154 I alpha/beta hydrolase fold
GAFDNDEC_02144 2.3e-119 lssY 3.6.1.27 I phosphatase
GAFDNDEC_02145 5.6e-189 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GAFDNDEC_02146 2.8e-70 S Threonine/Serine exporter, ThrE
GAFDNDEC_02147 1.5e-130 thrE S Putative threonine/serine exporter
GAFDNDEC_02148 1.3e-90 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
GAFDNDEC_02149 2.2e-139 yhfI S Metallo-beta-lactamase superfamily
GAFDNDEC_02150 2.7e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
GAFDNDEC_02151 2.2e-131 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
GAFDNDEC_02152 2.3e-93 coiA 3.6.4.12 S Competence protein
GAFDNDEC_02153 3e-93 coiA 3.6.4.12 S Competence protein
GAFDNDEC_02154 0.0 pepF E oligoendopeptidase F
GAFDNDEC_02155 3.6e-114 yjbH Q Thioredoxin
GAFDNDEC_02156 2.7e-120 yjbM 2.7.6.5 S RelA SpoT domain protein
GAFDNDEC_02157 4.7e-151 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GAFDNDEC_02158 8.9e-175 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
GAFDNDEC_02159 5.1e-116 cutC P Participates in the control of copper homeostasis
GAFDNDEC_02160 7.4e-194 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
GAFDNDEC_02161 3.9e-57 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
GAFDNDEC_02162 4.3e-206 XK27_05220 S AI-2E family transporter
GAFDNDEC_02163 7.7e-115 GK ROK family
GAFDNDEC_02164 3.6e-295 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GAFDNDEC_02165 2e-250 chbC G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GAFDNDEC_02166 2.6e-76 S Domain of unknown function (DUF3284)
GAFDNDEC_02167 3.9e-24
GAFDNDEC_02168 4.7e-252 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GAFDNDEC_02169 9e-130 K UbiC transcription regulator-associated domain protein
GAFDNDEC_02170 2.6e-191 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
GAFDNDEC_02171 4.5e-143 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
GAFDNDEC_02172 0.0 helD 3.6.4.12 L DNA helicase
GAFDNDEC_02173 2.9e-87 L COG2801 Transposase and inactivated derivatives
GAFDNDEC_02174 1.1e-125 epsB M biosynthesis protein
GAFDNDEC_02175 7.3e-124 ywqD 2.7.10.1 D Capsular exopolysaccharide family
GAFDNDEC_02176 1e-145 ywqE 3.1.3.48 GM PHP domain protein
GAFDNDEC_02177 9.6e-180 cps4D 5.1.3.2 M RmlD substrate binding domain
GAFDNDEC_02178 8.7e-127 tuaA M Bacterial sugar transferase
GAFDNDEC_02179 4.6e-202 cps4F 2.4.1.21, 2.4.1.306 GT4,GT5 M Glycosyl transferases group 1
GAFDNDEC_02180 1.8e-184 cps4G M Glycosyltransferase Family 4
GAFDNDEC_02181 2.9e-227
GAFDNDEC_02182 4.7e-174 cps4I M Glycosyltransferase like family 2
GAFDNDEC_02183 1.6e-255 cps4J S Polysaccharide biosynthesis protein
GAFDNDEC_02184 1.1e-250 cpdA S Calcineurin-like phosphoesterase
GAFDNDEC_02185 2.9e-87 L COG2801 Transposase and inactivated derivatives
GAFDNDEC_02186 6e-07 soj D plasmid maintenance
GAFDNDEC_02188 1.5e-118 ung2 3.2.2.27 L Uracil-DNA glycosylase
GAFDNDEC_02189 3.1e-121 pnb C nitroreductase
GAFDNDEC_02190 5.2e-65 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
GAFDNDEC_02191 1.8e-116 S Elongation factor G-binding protein, N-terminal
GAFDNDEC_02192 0.0 nqr 1.3.5.4, 1.5.1.36 C FMN_bind
GAFDNDEC_02193 3.5e-258 P Sodium:sulfate symporter transmembrane region
GAFDNDEC_02194 5.7e-158 K LysR family
GAFDNDEC_02195 1e-72 C FMN binding
GAFDNDEC_02197 7.6e-169 EG EamA-like transporter family
GAFDNDEC_02198 8.9e-38 gcvR T Belongs to the UPF0237 family
GAFDNDEC_02199 3e-243 XK27_08635 S UPF0210 protein
GAFDNDEC_02200 1.6e-134 K response regulator
GAFDNDEC_02201 2.9e-287 yclK 2.7.13.3 T Histidine kinase
GAFDNDEC_02202 9.4e-217 ywbD 2.1.1.191 J S-adenosylmethionine-dependent methyltransferase
GAFDNDEC_02203 3.7e-154 glcU U sugar transport
GAFDNDEC_02204 3.9e-259 pgi 5.3.1.9 G Belongs to the GPI family
GAFDNDEC_02205 6.8e-24
GAFDNDEC_02206 0.0 macB3 V ABC transporter, ATP-binding protein
GAFDNDEC_02207 9.5e-273 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
GAFDNDEC_02208 0.0 msbA2 3.6.3.44 P ABC transporter transmembrane region
GAFDNDEC_02209 1.6e-16
GAFDNDEC_02210 1.9e-18
GAFDNDEC_02211 1.1e-18
GAFDNDEC_02212 4.2e-18
GAFDNDEC_02213 2.1e-17
GAFDNDEC_02214 2.1e-17
GAFDNDEC_02215 2.1e-17
GAFDNDEC_02216 1.5e-14
GAFDNDEC_02217 1.4e-15
GAFDNDEC_02218 1.5e-14
GAFDNDEC_02219 5e-161 M MucBP domain
GAFDNDEC_02220 0.0 bztC D nuclear chromosome segregation
GAFDNDEC_02221 7.3e-83 K MarR family
GAFDNDEC_02222 3.2e-43
GAFDNDEC_02223 2e-38
GAFDNDEC_02224 1.1e-225 sip L Belongs to the 'phage' integrase family
GAFDNDEC_02225 1.4e-124 K sequence-specific DNA binding
GAFDNDEC_02227 3.1e-10
GAFDNDEC_02228 1.2e-29
GAFDNDEC_02229 2.5e-144 L DNA replication protein
GAFDNDEC_02230 2.6e-266 S Virulence-associated protein E
GAFDNDEC_02231 7e-74
GAFDNDEC_02233 1.7e-49 S head-tail joining protein
GAFDNDEC_02234 1.1e-68 L Phage-associated protein
GAFDNDEC_02235 1.6e-82 terS L overlaps another CDS with the same product name
GAFDNDEC_02236 0.0 terL S overlaps another CDS with the same product name
GAFDNDEC_02238 5e-204 S Phage portal protein
GAFDNDEC_02239 1.3e-274 S Caudovirus prohead serine protease
GAFDNDEC_02242 2.1e-39 S Phage gp6-like head-tail connector protein
GAFDNDEC_02243 1e-55
GAFDNDEC_02246 1.2e-29
GAFDNDEC_02248 5.6e-219 int L Belongs to the 'phage' integrase family
GAFDNDEC_02251 2.7e-44 D Anion-transporting ATPase
GAFDNDEC_02254 3.3e-35 ycnE 3.1.1.29 S Antibiotic biosynthesis monooxygenase
GAFDNDEC_02255 4.2e-27
GAFDNDEC_02256 1.6e-24 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GAFDNDEC_02257 2.2e-11 M LysM domain
GAFDNDEC_02258 7.2e-53
GAFDNDEC_02259 2e-44 S Domain of unknown function (DUF5067)
GAFDNDEC_02260 1.8e-134 J Domain of unknown function (DUF4041)
GAFDNDEC_02261 1.1e-76 E IrrE N-terminal-like domain
GAFDNDEC_02262 7.7e-61 yvaO K Helix-turn-helix domain
GAFDNDEC_02263 1.3e-37 K Helix-turn-helix
GAFDNDEC_02265 7.2e-52
GAFDNDEC_02266 1.2e-72
GAFDNDEC_02267 1.1e-14 S Domain of unknown function (DUF1508)
GAFDNDEC_02269 1.6e-54 S Bacteriophage Mu Gam like protein
GAFDNDEC_02270 1.1e-64
GAFDNDEC_02271 1.1e-156 L DnaD domain protein
GAFDNDEC_02272 2.2e-50
GAFDNDEC_02273 1.1e-61 ps308 K AntA/AntB antirepressor
GAFDNDEC_02274 5.4e-84
GAFDNDEC_02275 2.7e-64 rusA 3.1.22.4 L Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
GAFDNDEC_02277 1.5e-46 S YopX protein
GAFDNDEC_02279 3.6e-79 arpU S Phage transcriptional regulator, ArpU family
GAFDNDEC_02282 3.3e-16 S KTSC domain
GAFDNDEC_02284 1.3e-79 K acetyltransferase
GAFDNDEC_02285 6.6e-31 rplV S ASCH
GAFDNDEC_02286 5.4e-18
GAFDNDEC_02287 3.5e-11
GAFDNDEC_02288 1.2e-59 S Terminase small subunit
GAFDNDEC_02289 8.9e-264 S Phage terminase large subunit
GAFDNDEC_02290 6.8e-284 S Phage portal protein, SPP1 Gp6-like
GAFDNDEC_02291 2.4e-164 S Phage minor capsid protein 2
GAFDNDEC_02292 8.7e-65 S Phage minor structural protein GP20
GAFDNDEC_02293 1.9e-186 S viral capsid
GAFDNDEC_02294 4.3e-10
GAFDNDEC_02295 7.5e-53 S Minor capsid protein
GAFDNDEC_02296 3.1e-51 S Minor capsid protein
GAFDNDEC_02297 2.4e-63 S Minor capsid protein from bacteriophage
GAFDNDEC_02298 1.8e-68
GAFDNDEC_02300 7.9e-98 S Bacteriophage Gp15 protein
GAFDNDEC_02301 0.0 S peptidoglycan catabolic process
GAFDNDEC_02302 1.1e-62 S Phage tail protein
GAFDNDEC_02303 3.8e-66 S Prophage endopeptidase tail
GAFDNDEC_02305 4e-19 E GDSL-like Lipase/Acylhydrolase
GAFDNDEC_02306 1.3e-63 S Domain of unknown function (DUF2479)
GAFDNDEC_02310 1.5e-60
GAFDNDEC_02311 3.5e-24
GAFDNDEC_02312 1.9e-153 M Glycosyl hydrolases family 25
GAFDNDEC_02313 1.1e-44
GAFDNDEC_02314 7.9e-27 hol S Bacteriophage holin
GAFDNDEC_02315 3.1e-72 V Abi-like protein
GAFDNDEC_02316 3.8e-135 yxkH G Polysaccharide deacetylase
GAFDNDEC_02317 3.3e-65 S Protein of unknown function (DUF1093)
GAFDNDEC_02318 0.0 ycfI V ABC transporter, ATP-binding protein
GAFDNDEC_02319 0.0 yfiC V ABC transporter
GAFDNDEC_02320 5.3e-125
GAFDNDEC_02321 1.9e-58
GAFDNDEC_02322 1e-203 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
GAFDNDEC_02323 1.4e-29
GAFDNDEC_02324 4.1e-192 ampC V Beta-lactamase
GAFDNDEC_02325 9.8e-196 manA 5.3.1.8 G mannose-6-phosphate isomerase
GAFDNDEC_02326 2.9e-136 cobQ S glutamine amidotransferase
GAFDNDEC_02327 1.5e-263 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
GAFDNDEC_02328 9.3e-109 tdk 2.7.1.21 F thymidine kinase
GAFDNDEC_02329 1.2e-197 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GAFDNDEC_02330 8.6e-159 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
GAFDNDEC_02331 2e-191 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
GAFDNDEC_02332 2.9e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
GAFDNDEC_02333 4.7e-114 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GAFDNDEC_02334 1e-232 pyrP F Permease
GAFDNDEC_02335 6.5e-128 atpB C it plays a direct role in the translocation of protons across the membrane
GAFDNDEC_02336 2.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GAFDNDEC_02337 6e-51 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GAFDNDEC_02338 1.8e-90 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GAFDNDEC_02339 2.7e-280 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GAFDNDEC_02340 2.3e-165 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GAFDNDEC_02341 2.1e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GAFDNDEC_02342 1.1e-50 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
GAFDNDEC_02343 4.4e-247 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GAFDNDEC_02344 2.1e-102 J Acetyltransferase (GNAT) domain
GAFDNDEC_02345 3.5e-180 mbl D Cell shape determining protein MreB Mrl
GAFDNDEC_02346 2.3e-43 yidD S Could be involved in insertion of integral membrane proteins into the membrane
GAFDNDEC_02347 9.5e-33 S Protein of unknown function (DUF2969)
GAFDNDEC_02348 2.7e-219 rodA D Belongs to the SEDS family
GAFDNDEC_02349 3.6e-48 gcsH2 E glycine cleavage
GAFDNDEC_02350 4e-187 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GAFDNDEC_02351 1.4e-111 metI U ABC transporter permease
GAFDNDEC_02352 2.2e-148 metQ M Belongs to the nlpA lipoprotein family
GAFDNDEC_02353 6.9e-167 hicD1 1.1.1.27 C Belongs to the LDH MDH superfamily
GAFDNDEC_02354 6e-177 S Protein of unknown function (DUF2785)
GAFDNDEC_02355 3.6e-188 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
GAFDNDEC_02356 5.4e-214 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
GAFDNDEC_02357 5.1e-295 glpQ3 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
GAFDNDEC_02358 3.3e-161 2.3.1.19 K Helix-turn-helix XRE-family like proteins
GAFDNDEC_02359 1.5e-200 bla2 3.5.2.6 V Beta-lactamase enzyme family
GAFDNDEC_02360 6.2e-82 usp6 T universal stress protein
GAFDNDEC_02361 1.5e-38
GAFDNDEC_02362 1.3e-27
GAFDNDEC_02363 8.2e-63
GAFDNDEC_02364 3.4e-106 L Integrase
GAFDNDEC_02365 1.7e-44 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
GAFDNDEC_02366 5.4e-59 yafQ S Bacterial toxin of type II toxin-antitoxin system, YafQ
GAFDNDEC_02367 0.0 L Type III restriction enzyme res subunit
GAFDNDEC_02368 5.6e-116 3.1.21.4 L restriction endonuclease
GAFDNDEC_02369 3.8e-78 S Protein of unknown function, DUF536
GAFDNDEC_02370 2.4e-175 L Initiator Replication protein
GAFDNDEC_02371 4e-156 K Helix-turn-helix domain, rpiR family
GAFDNDEC_02372 6.4e-176 ccpB 5.1.1.1 K lacI family
GAFDNDEC_02373 1.6e-140 S Sucrose-6F-phosphate phosphohydrolase
GAFDNDEC_02374 1.5e-124 tal 2.2.1.2 H Transaldolase/Fructose-6-phosphate aldolase
GAFDNDEC_02375 6.9e-178 K sugar-binding domain protein
GAFDNDEC_02376 0.0 ybiW 2.3.1.54 C Pyruvate formate lyase-like
GAFDNDEC_02377 3.7e-134 yciT K DeoR C terminal sensor domain
GAFDNDEC_02378 3.8e-111 pflC 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GAFDNDEC_02379 1.7e-84 dps P Belongs to the Dps family
GAFDNDEC_02381 0.0 ybfG M peptidoglycan-binding domain-containing protein
GAFDNDEC_02382 4.9e-57 pemK T PemK-like, MazF-like toxin of type II toxin-antitoxin system
GAFDNDEC_02383 4.8e-44 T Antidote-toxin recognition MazE, bacterial antitoxin
GAFDNDEC_02384 2.8e-105 L Integrase
GAFDNDEC_02385 2.5e-29
GAFDNDEC_02386 2.9e-176 L Initiator Replication protein
GAFDNDEC_02387 2.8e-88
GAFDNDEC_02388 2.1e-21
GAFDNDEC_02389 4.2e-144 soj D AAA domain
GAFDNDEC_02390 2.3e-34
GAFDNDEC_02393 1.7e-81 tnp L DDE domain
GAFDNDEC_02394 2.6e-16
GAFDNDEC_02396 2.2e-38 sirR K Helix-turn-helix diphteria tox regulatory element
GAFDNDEC_02397 3.9e-250 mntH P H( )-stimulated, divalent metal cation uptake system
GAFDNDEC_02398 1e-56 T Belongs to the universal stress protein A family
GAFDNDEC_02399 2.6e-29 GK ROK family
GAFDNDEC_02400 4.1e-133 K Helix-turn-helix domain, rpiR family
GAFDNDEC_02401 1.8e-190 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GAFDNDEC_02402 8.2e-168 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
GAFDNDEC_02403 4e-229 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
GAFDNDEC_02404 3.1e-178
GAFDNDEC_02405 3.9e-133 cobB K SIR2 family
GAFDNDEC_02406 5.8e-160 yunF F Protein of unknown function DUF72
GAFDNDEC_02407 2.9e-87 L COG2801 Transposase and inactivated derivatives
GAFDNDEC_02408 2.2e-238 opuAB P Binding-protein-dependent transport system inner membrane component
GAFDNDEC_02409 2.7e-227 rodA D Cell cycle protein
GAFDNDEC_02411 1.1e-20 hol S Bacteriophage holin
GAFDNDEC_02412 1.2e-34 S Haemolysin XhlA
GAFDNDEC_02413 1.4e-188 M Glycosyl hydrolases family 25
GAFDNDEC_02414 3.7e-31
GAFDNDEC_02415 3.2e-49
GAFDNDEC_02418 1.1e-91
GAFDNDEC_02420 4.5e-58 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
GAFDNDEC_02421 2.4e-40 K prlF antitoxin for toxin YhaV_toxin
GAFDNDEC_02422 7.5e-106 L Integrase
GAFDNDEC_02423 1.6e-15
GAFDNDEC_02424 8.5e-78 repB L Initiator Replication protein
GAFDNDEC_02425 3.7e-10 3.2.1.14 GH18
GAFDNDEC_02426 1.9e-25 S Protein of unknown function (DUF1093)
GAFDNDEC_02427 2e-35
GAFDNDEC_02428 1.7e-41 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GAFDNDEC_02429 2.6e-160 rrmA 2.1.1.187 H Methyltransferase
GAFDNDEC_02431 9.8e-210 brnQ U Component of the transport system for branched-chain amino acids
GAFDNDEC_02432 2.9e-111 ywnB S NAD(P)H-binding
GAFDNDEC_02433 1.8e-95 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
GAFDNDEC_02434 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
GAFDNDEC_02435 3.8e-295 XK27_00720 S Leucine-rich repeat (LRR) protein
GAFDNDEC_02436 2.4e-190 yclI V MacB-like periplasmic core domain
GAFDNDEC_02437 2.1e-120 yclH V ABC transporter
GAFDNDEC_02438 2.5e-114 V CAAX protease self-immunity
GAFDNDEC_02439 4.5e-121 S CAAX protease self-immunity
GAFDNDEC_02440 1.1e-60 M NLP P60 protein
GAFDNDEC_02441 7.4e-30
GAFDNDEC_02443 1.4e-34 S Bacterial mobilisation protein (MobC)
GAFDNDEC_02444 3.4e-55 D Relaxase/Mobilisation nuclease domain
GAFDNDEC_02445 1.6e-77 S Initiator Replication protein
GAFDNDEC_02451 5.1e-08
GAFDNDEC_02457 2.8e-91 apt 2.4.2.22, 2.4.2.7 F Phosphoribosyl transferase domain
GAFDNDEC_02458 1.8e-182 P secondary active sulfate transmembrane transporter activity
GAFDNDEC_02459 5.8e-24
GAFDNDEC_02460 3.7e-57
GAFDNDEC_02461 2e-94 K Acetyltransferase (GNAT) domain
GAFDNDEC_02462 5e-156 T Calcineurin-like phosphoesterase superfamily domain
GAFDNDEC_02464 9.8e-231 mntH P H( )-stimulated, divalent metal cation uptake system
GAFDNDEC_02465 1.4e-186 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
GAFDNDEC_02466 9.2e-256 mmuP E amino acid
GAFDNDEC_02467 1.1e-167 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
GAFDNDEC_02468 1.5e-291 tagE1 2.4.1.52 GT4 M Glycosyl transferases group 1
GAFDNDEC_02469 1.6e-121
GAFDNDEC_02470 4.1e-212 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GAFDNDEC_02471 9.3e-278 bmr3 EGP Major facilitator Superfamily
GAFDNDEC_02472 3.2e-100 N Cell shape-determining protein MreB
GAFDNDEC_02473 0.0 S Pfam Methyltransferase
GAFDNDEC_02474 1e-141 tagE2 2.4.1.52 GT4 M Glycosyl transferases group 1
GAFDNDEC_02475 1.7e-113 tagE2 2.4.1.52 GT4 M Glycosyl transferases group 1
GAFDNDEC_02476 7.5e-299 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
GAFDNDEC_02477 4.2e-29
GAFDNDEC_02478 1e-93 ytqB 2.1.1.176 J Putative rRNA methylase
GAFDNDEC_02479 1.4e-124 3.6.1.27 I Acid phosphatase homologues
GAFDNDEC_02480 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
GAFDNDEC_02481 3e-301 ytgP S Polysaccharide biosynthesis protein
GAFDNDEC_02482 1.9e-135 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GAFDNDEC_02483 8.3e-151 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GAFDNDEC_02484 1.3e-273 pepV 3.5.1.18 E dipeptidase PepV
GAFDNDEC_02485 4.1e-84 uspA T Belongs to the universal stress protein A family
GAFDNDEC_02486 1.8e-201 ugpC 3.6.3.20 E Belongs to the ABC transporter superfamily
GAFDNDEC_02487 1.3e-171 ugpA U Binding-protein-dependent transport system inner membrane component
GAFDNDEC_02488 1.1e-150 ugpE G ABC transporter permease
GAFDNDEC_02489 3.5e-260 ugpB G Bacterial extracellular solute-binding protein
GAFDNDEC_02490 3.8e-125 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
GAFDNDEC_02491 3.8e-119 dck 2.7.1.74 F deoxynucleoside kinase
GAFDNDEC_02492 5.5e-41 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GAFDNDEC_02493 2.7e-180 XK27_06930 V domain protein
GAFDNDEC_02495 5.6e-127 V Transport permease protein
GAFDNDEC_02496 5.7e-155 V ABC transporter
GAFDNDEC_02497 7e-173 K LytTr DNA-binding domain
GAFDNDEC_02499 3.1e-155 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GAFDNDEC_02500 1.6e-64 K helix_turn_helix, mercury resistance
GAFDNDEC_02501 3.5e-117 GM NAD(P)H-binding
GAFDNDEC_02502 2.3e-157 ypaH EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
GAFDNDEC_02503 1.7e-148 S Sucrose-6F-phosphate phosphohydrolase
GAFDNDEC_02504 1.7e-108
GAFDNDEC_02505 1.9e-223 pltK 2.7.13.3 T GHKL domain
GAFDNDEC_02506 5.7e-138 pltR K LytTr DNA-binding domain
GAFDNDEC_02507 2.9e-54
GAFDNDEC_02508 2.5e-59
GAFDNDEC_02509 3e-114 S CAAX protease self-immunity
GAFDNDEC_02510 1.6e-85 ohrR K helix_turn_helix multiple antibiotic resistance protein
GAFDNDEC_02511 1e-90
GAFDNDEC_02512 2.5e-46
GAFDNDEC_02513 0.0 uvrA2 L ABC transporter
GAFDNDEC_02516 5.9e-52
GAFDNDEC_02517 3.5e-10
GAFDNDEC_02518 2.1e-180
GAFDNDEC_02519 1.6e-88 gtcA S Teichoic acid glycosylation protein
GAFDNDEC_02520 3.6e-58 S Protein of unknown function (DUF1516)
GAFDNDEC_02521 0.0 yitJ 1.5.1.20, 2.1.1.10, 2.1.1.13 E catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
GAFDNDEC_02522 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GAFDNDEC_02523 7.5e-305 S Protein conserved in bacteria
GAFDNDEC_02524 3.6e-210 sat 2.7.7.4 H the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms
GAFDNDEC_02525 9.7e-112 cysC 2.7.1.25, 2.7.7.4 F Catalyzes the synthesis of activated sulfate
GAFDNDEC_02526 8.5e-176 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain
GAFDNDEC_02527 7.9e-305 astA 2.8.2.22 M Arylsulfotransferase Ig-like domain
GAFDNDEC_02528 0.0 yfbS P Sodium:sulfate symporter transmembrane region
GAFDNDEC_02529 2.9e-24 dinF V MatE
GAFDNDEC_02530 3.1e-193 dinF V MatE
GAFDNDEC_02531 1.9e-31
GAFDNDEC_02534 2.2e-78 elaA S Acetyltransferase (GNAT) domain
GAFDNDEC_02535 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
GAFDNDEC_02536 4e-81
GAFDNDEC_02537 0.0 yhcA V MacB-like periplasmic core domain
GAFDNDEC_02538 7.6e-107
GAFDNDEC_02539 3.7e-95 EGP Major facilitator Superfamily
GAFDNDEC_02540 2e-114 M ErfK YbiS YcfS YnhG
GAFDNDEC_02541 4e-34 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GAFDNDEC_02542 8.4e-284 ydfD K Alanine-glyoxylate amino-transferase
GAFDNDEC_02543 7.5e-101 argO S LysE type translocator
GAFDNDEC_02544 3.2e-214 arcT 2.6.1.1 E Aminotransferase
GAFDNDEC_02545 4.4e-77 argR K Regulates arginine biosynthesis genes
GAFDNDEC_02546 2.9e-12
GAFDNDEC_02547 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
GAFDNDEC_02548 1e-54 yheA S Belongs to the UPF0342 family
GAFDNDEC_02549 5.3e-231 yhaO L Ser Thr phosphatase family protein
GAFDNDEC_02550 0.0 L AAA domain
GAFDNDEC_02551 4.2e-186 yhaM S Metal dependent phosphohydrolases with conserved 'HD' motif.
GAFDNDEC_02552 4.8e-213
GAFDNDEC_02553 1.7e-176 K LysR substrate binding domain
GAFDNDEC_02554 4.7e-111 1.3.5.4 S NADPH-dependent FMN reductase
GAFDNDEC_02555 0.0 1.3.5.4 C FAD binding domain
GAFDNDEC_02556 5.5e-98
GAFDNDEC_02557 1.9e-74 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
GAFDNDEC_02558 7.5e-251 M domain protein
GAFDNDEC_02559 6.1e-185 ykoT GT2 M Glycosyl transferase family 2
GAFDNDEC_02560 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
GAFDNDEC_02561 3.2e-18 S NUDIX domain
GAFDNDEC_02562 0.0 S membrane
GAFDNDEC_02563 3e-260 S ATPases associated with a variety of cellular activities
GAFDNDEC_02564 8.9e-116 P cobalt transport
GAFDNDEC_02565 1.5e-258 P ABC transporter
GAFDNDEC_02566 3.1e-101 S ABC transporter permease
GAFDNDEC_02567 4.8e-90 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
GAFDNDEC_02568 4.9e-34
GAFDNDEC_02569 1.3e-60 S Domain of unknown function (DU1801)
GAFDNDEC_02570 4e-164 FbpA K Domain of unknown function (DUF814)
GAFDNDEC_02571 1.3e-218 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GAFDNDEC_02573 7.7e-58 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GAFDNDEC_02574 8.5e-50 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GAFDNDEC_02575 6e-57 L Transposase
GAFDNDEC_02576 3.4e-21 L Replication protein
GAFDNDEC_02577 1.5e-104 pre D Plasmid recombination enzyme
GAFDNDEC_02589 5.5e-08
GAFDNDEC_02599 8.1e-63 M LysM domain
GAFDNDEC_02600 6e-57 L Transposase
GAFDNDEC_02601 1.7e-88 L Helix-turn-helix domain
GAFDNDEC_02602 1.2e-163 L PFAM Integrase catalytic region
GAFDNDEC_02603 1.4e-220 L Transposase
GAFDNDEC_02604 2.9e-87 L COG2801 Transposase and inactivated derivatives
GAFDNDEC_02606 8.4e-117 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
GAFDNDEC_02607 6e-227 1.7.1.15 S Pyridine nucleotide-disulphide oxidoreductase
GAFDNDEC_02608 4.2e-70 S Pyrimidine dimer DNA glycosylase
GAFDNDEC_02609 1.6e-89 folT 2.7.13.3 T ECF transporter, substrate-specific component
GAFDNDEC_02610 3.6e-11
GAFDNDEC_02611 9e-13 ytgB S Transglycosylase associated protein
GAFDNDEC_02612 4.2e-291 katA 1.11.1.6 C Belongs to the catalase family
GAFDNDEC_02613 4.9e-78 yneH 1.20.4.1 K ArsC family
GAFDNDEC_02614 7.4e-135 K LytTr DNA-binding domain
GAFDNDEC_02615 8.7e-160 2.7.13.3 T GHKL domain
GAFDNDEC_02616 1.8e-12
GAFDNDEC_02617 5.3e-67 agrB KOT May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor
GAFDNDEC_02618 0.0 clpL O C-terminal, D2-small domain, of ClpB protein
GAFDNDEC_02620 2.3e-201 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
GAFDNDEC_02621 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
GAFDNDEC_02622 8.7e-72 K Transcriptional regulator
GAFDNDEC_02623 0.0 spxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
GAFDNDEC_02624 9.5e-62 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
GAFDNDEC_02625 1.3e-174 srlE 2.7.1.198 G Sorbitol phosphotransferase enzyme II N-terminus
GAFDNDEC_02626 2e-100 srlA G PTS system enzyme II sorbitol-specific factor
GAFDNDEC_02627 1.1e-86 gutM K Glucitol operon activator protein (GutM)
GAFDNDEC_02628 0.0 srlM 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Mga helix-turn-helix domain
GAFDNDEC_02629 3.2e-144 IQ NAD dependent epimerase/dehydratase family
GAFDNDEC_02630 2.7e-160 rbsU U ribose uptake protein RbsU
GAFDNDEC_02631 7.9e-67 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
GAFDNDEC_02632 2.3e-162 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GAFDNDEC_02633 5.2e-188 rbsR K helix_turn _helix lactose operon repressor
GAFDNDEC_02635 7.8e-09
GAFDNDEC_02636 4.8e-54
GAFDNDEC_02637 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
GAFDNDEC_02638 2.7e-79 T Universal stress protein family
GAFDNDEC_02639 2.2e-99 padR K Virulence activator alpha C-term
GAFDNDEC_02640 4.9e-104 padC Q Phenolic acid decarboxylase
GAFDNDEC_02641 6.7e-142 tesE Q hydratase
GAFDNDEC_02642 2.2e-87 yjaB_1 K Acetyltransferase (GNAT) domain
GAFDNDEC_02643 2.5e-158 degV S DegV family
GAFDNDEC_02644 8.4e-59 2.6.1.2, 2.6.1.66 K Bacteriophage CI repressor helix-turn-helix domain
GAFDNDEC_02645 7.4e-255 pepC 3.4.22.40 E aminopeptidase
GAFDNDEC_02647 1.2e-108 lepB 3.4.21.89 U Belongs to the peptidase S26 family
GAFDNDEC_02648 7.3e-302
GAFDNDEC_02650 2.3e-158 S Bacterial protein of unknown function (DUF916)
GAFDNDEC_02651 6.9e-93 S Cell surface protein
GAFDNDEC_02652 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
GAFDNDEC_02653 4.6e-255 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
GAFDNDEC_02654 2.5e-130 jag S R3H domain protein
GAFDNDEC_02655 9e-105 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GAFDNDEC_02656 1.4e-56 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
GAFDNDEC_02657 2.7e-255 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GAFDNDEC_02658 2e-208 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
GAFDNDEC_02659 5e-37 yaaA S S4 domain protein YaaA
GAFDNDEC_02660 1.9e-206 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GAFDNDEC_02661 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GAFDNDEC_02662 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GAFDNDEC_02663 1.5e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
GAFDNDEC_02664 1e-59 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
GAFDNDEC_02665 6.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GAFDNDEC_02666 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
GAFDNDEC_02667 1.4e-67 rplI J Binds to the 23S rRNA
GAFDNDEC_02668 7.8e-242 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
GAFDNDEC_02669 8.8e-226 yttB EGP Major facilitator Superfamily
GAFDNDEC_02670 4.7e-143 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
GAFDNDEC_02671 5.6e-228 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
GAFDNDEC_02673 4.2e-276 E ABC transporter, substratebinding protein
GAFDNDEC_02674 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
GAFDNDEC_02675 1.5e-214 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
GAFDNDEC_02676 6.3e-197 glgD 2.4.1.21, 2.7.7.27 GT5 G Nucleotidyl transferase
GAFDNDEC_02677 1.9e-49 glgA 2.4.1.21 GT5 F Synthesizes alpha-1,4-glucan chains using ADP-glucose
GAFDNDEC_02678 7.6e-205 glgA 2.4.1.21 GT5 F Synthesizes alpha-1,4-glucan chains using ADP-glucose
GAFDNDEC_02679 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
GAFDNDEC_02680 0.0 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
GAFDNDEC_02682 1.7e-142 S haloacid dehalogenase-like hydrolase
GAFDNDEC_02683 3e-119 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
GAFDNDEC_02684 0.0 trePP 2.4.1.216, 2.4.1.8, 3.1.3.12, 3.2.1.28 GH37,GH65 G Glycosyl hydrolase family 65 central catalytic domain
GAFDNDEC_02685 1.3e-78 S Pyridoxamine 5'-phosphate oxidase
GAFDNDEC_02686 6.6e-30 cspA K Cold shock protein domain
GAFDNDEC_02687 1.7e-37
GAFDNDEC_02689 6.2e-131 K response regulator
GAFDNDEC_02690 0.0 vicK 2.7.13.3 T Histidine kinase
GAFDNDEC_02691 2e-244 yycH S YycH protein
GAFDNDEC_02692 2.2e-151 yycI S YycH protein
GAFDNDEC_02693 8.9e-158 vicX 3.1.26.11 S domain protein
GAFDNDEC_02694 6.8e-173 htrA 3.4.21.107 O serine protease
GAFDNDEC_02695 1.2e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GAFDNDEC_02696 4.3e-54 O Holliday junction DNA helicase ruvB N-terminus
GAFDNDEC_02700 3.2e-172 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
GAFDNDEC_02701 3.8e-31 tnpR1 L Resolvase, N terminal domain
GAFDNDEC_02702 1.1e-74 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
GAFDNDEC_02703 6.7e-164 ptlF S KR domain
GAFDNDEC_02704 3.5e-157 adc 4.1.1.4 Q Acetoacetate decarboxylase (ADC)
GAFDNDEC_02705 1.3e-122 drgA C Nitroreductase family
GAFDNDEC_02706 1.2e-291 QT PucR C-terminal helix-turn-helix domain
GAFDNDEC_02707 2.7e-120 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
GAFDNDEC_02708 1.1e-194 pva1 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GAFDNDEC_02709 7.4e-250 yjjP S Putative threonine/serine exporter
GAFDNDEC_02710 2.8e-134 wzb 3.1.3.48 T Tyrosine phosphatase family
GAFDNDEC_02711 2.6e-253 1.14.14.9 Q 4-hydroxyphenylacetate
GAFDNDEC_02712 2.9e-81 6.3.3.2 S ASCH
GAFDNDEC_02713 1.4e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
GAFDNDEC_02714 1.5e-169 yobV1 K WYL domain
GAFDNDEC_02715 3.6e-117 azoR C Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
GAFDNDEC_02716 0.0 tetP J elongation factor G
GAFDNDEC_02717 3.4e-126 S Protein of unknown function
GAFDNDEC_02718 2.5e-153 EG EamA-like transporter family
GAFDNDEC_02719 3.6e-93 MA20_25245 K FR47-like protein
GAFDNDEC_02720 2e-126 hchA S DJ-1/PfpI family
GAFDNDEC_02721 6.2e-185 1.1.1.1 C nadph quinone reductase
GAFDNDEC_02722 9.3e-50 K helix_turn_helix, Arsenical Resistance Operon Repressor
GAFDNDEC_02723 2.7e-236 mepA V MATE efflux family protein
GAFDNDEC_02724 2.2e-170 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
GAFDNDEC_02725 1.8e-136 S Belongs to the UPF0246 family
GAFDNDEC_02726 1.7e-75
GAFDNDEC_02727 4.6e-310 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
GAFDNDEC_02728 2.4e-141
GAFDNDEC_02730 7e-144 2.7.7.47 H Mediates bacterial resistance to the antibiotics streptomycin and spectomycin
GAFDNDEC_02731 4.8e-40
GAFDNDEC_02732 7.8e-129 cbiO P ABC transporter
GAFDNDEC_02733 3.4e-149 P Cobalt transport protein
GAFDNDEC_02734 1.8e-181 nikMN P PDGLE domain
GAFDNDEC_02735 4.2e-121 K Crp-like helix-turn-helix domain
GAFDNDEC_02736 1e-240 larA 5.1.2.1 S Domain of unknown function (DUF2088)
GAFDNDEC_02737 9.1e-122 larB S AIR carboxylase
GAFDNDEC_02738 5.9e-130 larC 4.99.1.12 S Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
GAFDNDEC_02739 5e-75 larC 4.99.1.12 S Protein of unknown function DUF111
GAFDNDEC_02740 1.5e-132 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GAFDNDEC_02741 2.8e-151 larE S NAD synthase
GAFDNDEC_02742 2.5e-178 1.6.5.5 C Zinc-binding dehydrogenase
GAFDNDEC_02743 1.3e-137 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
GAFDNDEC_02744 1.9e-147 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
GAFDNDEC_02745 7.3e-110 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
GAFDNDEC_02746 5.8e-206 cytX U Belongs to the purine-cytosine permease (2.A.39) family
GAFDNDEC_02747 7.9e-137 S peptidase C26
GAFDNDEC_02748 8.5e-229 L HIRAN domain
GAFDNDEC_02749 6.6e-56 L HIRAN domain
GAFDNDEC_02750 9.9e-85 F NUDIX domain
GAFDNDEC_02751 3.4e-250 yifK E Amino acid permease
GAFDNDEC_02752 1.7e-120
GAFDNDEC_02753 5.6e-149 ydjP I Alpha/beta hydrolase family
GAFDNDEC_02754 0.0 pacL1 P P-type ATPase
GAFDNDEC_02755 8.4e-142 2.4.2.3 F Phosphorylase superfamily
GAFDNDEC_02756 1.6e-28 KT PspC domain
GAFDNDEC_02757 2.3e-110 S NADPH-dependent FMN reductase
GAFDNDEC_02758 1.2e-74 papX3 K Transcriptional regulator
GAFDNDEC_02759 4.6e-73 hsp1 O Belongs to the small heat shock protein (HSP20) family
GAFDNDEC_02760 3.2e-80 S Protein of unknown function (DUF3021)
GAFDNDEC_02761 1.2e-67 K LytTr DNA-binding domain
GAFDNDEC_02762 4.7e-227 mdtG EGP Major facilitator Superfamily
GAFDNDEC_02763 5e-51 cadC1 K helix_turn_helix, Arsenical Resistance Operon Repressor
GAFDNDEC_02764 8.1e-216 yeaN P Transporter, major facilitator family protein
GAFDNDEC_02766 3.9e-156 S reductase
GAFDNDEC_02767 1.2e-165 1.1.1.65 C Aldo keto reductase
GAFDNDEC_02768 1.3e-81 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase like
GAFDNDEC_02769 0.0 lai 4.2.1.53 S Myosin-crossreactive antigen
GAFDNDEC_02770 6.2e-50
GAFDNDEC_02771 2.2e-258
GAFDNDEC_02772 4e-209 C Oxidoreductase
GAFDNDEC_02773 4.9e-151 cbiQ P cobalt transport
GAFDNDEC_02774 0.0 ykoD P ABC transporter, ATP-binding protein
GAFDNDEC_02775 2.5e-98 S UPF0397 protein
GAFDNDEC_02776 1.6e-129 K UbiC transcription regulator-associated domain protein
GAFDNDEC_02777 8.3e-54 K Transcriptional regulator PadR-like family
GAFDNDEC_02778 2.1e-140
GAFDNDEC_02779 3.4e-149
GAFDNDEC_02780 9.1e-89
GAFDNDEC_02781 1.2e-143 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
GAFDNDEC_02782 3.7e-10 yjjC V ABC transporter
GAFDNDEC_02783 1e-125 yjjC V ABC transporter
GAFDNDEC_02784 1.6e-291 M Exporter of polyketide antibiotics
GAFDNDEC_02785 3.1e-116 K Transcriptional regulator
GAFDNDEC_02786 8.9e-276 C Electron transfer flavoprotein FAD-binding domain
GAFDNDEC_02787 8.6e-74 folT 2.7.13.3 T ECF transporter, substrate-specific component
GAFDNDEC_02788 3.3e-263 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
GAFDNDEC_02789 6.8e-139 malR K Transcriptional regulator, LacI family
GAFDNDEC_02790 4.6e-113 yvdE K helix_turn _helix lactose operon repressor
GAFDNDEC_02791 4.5e-164 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
GAFDNDEC_02792 1.1e-128 malS 3.2.1.1 GH13 G Glycogen debranching enzyme, glucanotransferase domain
GAFDNDEC_02793 5.4e-173 G Bacterial extracellular solute-binding protein
GAFDNDEC_02794 7.3e-134 U Binding-protein-dependent transport system inner membrane component
GAFDNDEC_02795 1e-121 amyC U Binding-protein-dependent transport system inner membrane component
GAFDNDEC_02796 3.3e-25
GAFDNDEC_02797 1.2e-176 msmK P Belongs to the ABC transporter superfamily
GAFDNDEC_02798 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
GAFDNDEC_02799 0.0 3.2.1.96 G Glycosyl hydrolase family 85
GAFDNDEC_02800 6.5e-162 3.2.1.96 G Glycosyl hydrolase family 85
GAFDNDEC_02804 9.6e-82 opuAB P Binding-protein-dependent transport system inner membrane component
GAFDNDEC_02805 7.9e-143 P ATPases associated with a variety of cellular activities
GAFDNDEC_02806 2.1e-221 lytR5 K Cell envelope-related transcriptional attenuator domain
GAFDNDEC_02807 2.1e-100 L Helix-turn-helix domain
GAFDNDEC_02808 3.4e-177 csbB 2.4.1.83 GT2 M Glycosyltransferase like family 2
GAFDNDEC_02809 1.3e-66
GAFDNDEC_02810 1.1e-76
GAFDNDEC_02811 7.1e-217 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
GAFDNDEC_02812 5.4e-86
GAFDNDEC_02813 5.6e-115 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GAFDNDEC_02814 6.5e-36 ynzC S UPF0291 protein
GAFDNDEC_02815 4.3e-33 yneF S Uncharacterised protein family (UPF0154)
GAFDNDEC_02816 1.2e-117 plsC 2.3.1.51 I Acyltransferase
GAFDNDEC_02817 5.4e-133 yabB 2.1.1.223 L Methyltransferase small domain
GAFDNDEC_02818 1.8e-39 yazA L GIY-YIG catalytic domain protein
GAFDNDEC_02819 2.3e-187 ldhA 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GAFDNDEC_02820 4.7e-134 S Haloacid dehalogenase-like hydrolase
GAFDNDEC_02821 1.9e-144 rpsB J Belongs to the universal ribosomal protein uS2 family
GAFDNDEC_02822 1e-151 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GAFDNDEC_02823 1.1e-127 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
GAFDNDEC_02824 2.5e-82 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
GAFDNDEC_02825 1.8e-147 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GAFDNDEC_02826 8.4e-137 cdsA 2.7.7.41 I Belongs to the CDS family
GAFDNDEC_02827 9.5e-231 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
GAFDNDEC_02828 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
GAFDNDEC_02829 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GAFDNDEC_02830 5.5e-83 rimP J Required for maturation of 30S ribosomal subunits
GAFDNDEC_02831 7.4e-217 nusA K Participates in both transcription termination and antitermination
GAFDNDEC_02832 9.5e-49 ylxR K Protein of unknown function (DUF448)
GAFDNDEC_02833 1.1e-47 ylxQ J ribosomal protein
GAFDNDEC_02834 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GAFDNDEC_02835 4.6e-50 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GAFDNDEC_02836 9.7e-264 ydiN 5.4.99.5 G Major Facilitator
GAFDNDEC_02837 1e-215 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
GAFDNDEC_02838 1e-93
GAFDNDEC_02839 1.4e-234 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
GAFDNDEC_02840 1.7e-196 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
GAFDNDEC_02841 2e-86 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
GAFDNDEC_02842 1.2e-171 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GAFDNDEC_02843 9.2e-189 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
GAFDNDEC_02844 7.3e-132 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
GAFDNDEC_02845 2.4e-195 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
GAFDNDEC_02846 1.6e-79 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GAFDNDEC_02847 0.0 dnaK O Heat shock 70 kDa protein
GAFDNDEC_02848 1.2e-184 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
GAFDNDEC_02849 2.3e-199 pbpX2 V Beta-lactamase
GAFDNDEC_02850 8.8e-19 dltX S D-Ala-teichoic acid biosynthesis protein
GAFDNDEC_02851 7e-297 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GAFDNDEC_02852 8.7e-234 dltB M MBOAT, membrane-bound O-acyltransferase family
GAFDNDEC_02853 2.4e-34 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GAFDNDEC_02854 6.1e-246 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
GAFDNDEC_02855 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
GAFDNDEC_02856 4e-127 3.6.4.12 L Belongs to the 'phage' integrase family
GAFDNDEC_02859 1.4e-49
GAFDNDEC_02860 1.4e-49
GAFDNDEC_02861 4.2e-115 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
GAFDNDEC_02862 1.3e-176 prmA J Ribosomal protein L11 methyltransferase
GAFDNDEC_02863 2.9e-134 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
GAFDNDEC_02864 9.6e-58
GAFDNDEC_02865 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GAFDNDEC_02866 8.5e-78 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GAFDNDEC_02867 2.2e-116 3.1.3.18 J HAD-hyrolase-like
GAFDNDEC_02868 5.1e-164 yniA G Fructosamine kinase
GAFDNDEC_02869 1.9e-155 lytH 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
GAFDNDEC_02870 2.2e-243 hisS 6.1.1.21 J histidyl-tRNA synthetase
GAFDNDEC_02871 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
GAFDNDEC_02872 4.2e-100 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GAFDNDEC_02873 1.7e-159 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GAFDNDEC_02874 5.1e-220 tagB 2.7.8.14, 2.7.8.44, 2.7.8.47 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
GAFDNDEC_02875 3.3e-169 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
GAFDNDEC_02876 4.2e-127 C Enoyl-(Acyl carrier protein) reductase
GAFDNDEC_02877 6.2e-151 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
GAFDNDEC_02878 9.7e-23 rpsU J Belongs to the bacterial ribosomal protein bS21 family
GAFDNDEC_02879 2.6e-71 yqeY S YqeY-like protein
GAFDNDEC_02880 3.4e-180 phoH T phosphate starvation-inducible protein PhoH
GAFDNDEC_02881 6.6e-84 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GAFDNDEC_02882 4.5e-73 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
GAFDNDEC_02883 1.5e-169 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GAFDNDEC_02884 3.1e-147 recO L Involved in DNA repair and RecF pathway recombination
GAFDNDEC_02885 6.8e-175 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
GAFDNDEC_02886 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
GAFDNDEC_02887 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
GAFDNDEC_02888 4.6e-197 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
GAFDNDEC_02889 9.5e-65 K helix_turn_helix gluconate operon transcriptional repressor
GAFDNDEC_02890 3.1e-164 ytrB V ABC transporter, ATP-binding protein
GAFDNDEC_02891 2.3e-198
GAFDNDEC_02892 1.4e-198
GAFDNDEC_02893 9.8e-127 S ABC-2 family transporter protein
GAFDNDEC_02894 5.9e-59 V ABC transporter, ATP-binding protein

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)