ORF_ID e_value Gene_name EC_number CAZy COGs Description
PDGADOJB_00001 3e-292 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PDGADOJB_00002 1.1e-189 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PDGADOJB_00003 1.2e-163 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PDGADOJB_00004 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PDGADOJB_00005 1.7e-96 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PDGADOJB_00006 2.2e-254 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PDGADOJB_00007 3.1e-74 yabR J RNA binding
PDGADOJB_00008 1.1e-63 divIC D Septum formation initiator
PDGADOJB_00010 2.2e-42 yabO J S4 domain protein
PDGADOJB_00011 3.3e-289 yabM S Polysaccharide biosynthesis protein
PDGADOJB_00012 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PDGADOJB_00013 4.5e-100 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PDGADOJB_00014 1e-176 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PDGADOJB_00015 4.2e-264 S Putative peptidoglycan binding domain
PDGADOJB_00016 2.1e-114 S (CBS) domain
PDGADOJB_00017 4.1e-84 S QueT transporter
PDGADOJB_00018 9.4e-189 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PDGADOJB_00019 1.1e-217 argD 2.6.1.11, 2.6.1.17 E acetylornithine
PDGADOJB_00020 9.4e-130 argB 2.7.2.8 F Belongs to the acetylglutamate kinase family. ArgB subfamily
PDGADOJB_00021 6.9e-231 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PDGADOJB_00022 2.7e-188 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PDGADOJB_00023 7.5e-205 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PDGADOJB_00024 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PDGADOJB_00025 0.0 kup P Transport of potassium into the cell
PDGADOJB_00026 2.3e-63 ndoA L Toxic component of a toxin-antitoxin (TA) module
PDGADOJB_00027 1.7e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PDGADOJB_00028 1e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PDGADOJB_00029 6.6e-258 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PDGADOJB_00030 5.6e-261 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PDGADOJB_00031 2e-146
PDGADOJB_00032 2.1e-139 htpX O Belongs to the peptidase M48B family
PDGADOJB_00033 1.7e-91 lemA S LemA family
PDGADOJB_00034 9.2e-127 srtA 3.4.22.70 M sortase family
PDGADOJB_00035 3.2e-214 J translation release factor activity
PDGADOJB_00036 7.8e-41 rpmE2 J Ribosomal protein L31
PDGADOJB_00037 3e-240 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PDGADOJB_00038 3.6e-238 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDGADOJB_00039 2.5e-26
PDGADOJB_00040 6.4e-131 S YheO-like PAS domain
PDGADOJB_00041 7.6e-158 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PDGADOJB_00042 1.4e-121 sdaAB 4.3.1.17 E Serine dehydratase beta chain
PDGADOJB_00043 3.1e-229 tdcC E amino acid
PDGADOJB_00044 4e-245 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PDGADOJB_00045 3.4e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PDGADOJB_00046 4e-46 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PDGADOJB_00047 3.8e-78 ywiB S Domain of unknown function (DUF1934)
PDGADOJB_00048 3.3e-155 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
PDGADOJB_00049 9e-264 ywfO S HD domain protein
PDGADOJB_00050 6.4e-148 yxeH S hydrolase
PDGADOJB_00051 4.1e-125
PDGADOJB_00052 2.5e-181 S DUF218 domain
PDGADOJB_00053 1.2e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDGADOJB_00054 2.2e-151 bla1 3.5.2.6 V Beta-lactamase enzyme family
PDGADOJB_00055 3.6e-207 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PDGADOJB_00056 6.6e-148 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
PDGADOJB_00057 2.1e-31
PDGADOJB_00058 1.7e-43 ankB S ankyrin repeats
PDGADOJB_00059 6.7e-12 T Pre-toxin TG
PDGADOJB_00060 9.2e-131 znuB U ABC 3 transport family
PDGADOJB_00061 9.8e-129 fhuC 3.6.3.35 P ABC transporter
PDGADOJB_00062 5.1e-181 S Prolyl oligopeptidase family
PDGADOJB_00063 1.5e-163 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PDGADOJB_00064 3.2e-37 veg S Biofilm formation stimulator VEG
PDGADOJB_00065 8.8e-159 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PDGADOJB_00066 2.3e-96 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PDGADOJB_00067 5.7e-146 tatD L hydrolase, TatD family
PDGADOJB_00068 1.6e-211 bcr1 EGP Major facilitator Superfamily
PDGADOJB_00069 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PDGADOJB_00070 1.8e-71 mutT 3.6.1.55 F DNA mismatch repair protein MutT
PDGADOJB_00071 2e-160 yunF F Protein of unknown function DUF72
PDGADOJB_00072 3.9e-133 cobB K SIR2 family
PDGADOJB_00073 3.1e-178
PDGADOJB_00074 4e-229 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PDGADOJB_00075 8.2e-168 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PDGADOJB_00076 7.9e-151 S Psort location Cytoplasmic, score
PDGADOJB_00077 2.9e-207
PDGADOJB_00078 3.1e-190 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PDGADOJB_00079 5.3e-133 K Helix-turn-helix domain, rpiR family
PDGADOJB_00080 1e-162 GK ROK family
PDGADOJB_00081 7.3e-296 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDGADOJB_00082 7.4e-250 chbC G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDGADOJB_00083 1.4e-74 S Domain of unknown function (DUF3284)
PDGADOJB_00084 3.9e-24
PDGADOJB_00085 1.9e-253 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDGADOJB_00086 9e-130 K UbiC transcription regulator-associated domain protein
PDGADOJB_00087 2.6e-191 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDGADOJB_00088 1e-142 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
PDGADOJB_00089 0.0 helD 3.6.4.12 L DNA helicase
PDGADOJB_00090 1.8e-47 higA K Helix-turn-helix XRE-family like proteins
PDGADOJB_00091 6.9e-36 S RelE-like toxin of type II toxin-antitoxin system HigB
PDGADOJB_00092 1.9e-113 S CAAX protease self-immunity
PDGADOJB_00093 6.4e-109 V CAAX protease self-immunity
PDGADOJB_00094 9.7e-118 ypbD S CAAX protease self-immunity
PDGADOJB_00095 1.2e-107 S CAAX protease self-immunity
PDGADOJB_00096 8.9e-243 mesE M Transport protein ComB
PDGADOJB_00097 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PDGADOJB_00098 6.7e-23
PDGADOJB_00099 6.9e-22 plnF
PDGADOJB_00100 4.8e-129 S CAAX protease self-immunity
PDGADOJB_00101 1e-131 plnD K LytTr DNA-binding domain
PDGADOJB_00102 1.9e-130 plnC K LytTr DNA-binding domain
PDGADOJB_00103 3.9e-227 plnB 2.7.13.3 T GHKL domain
PDGADOJB_00104 4.3e-18 plnA
PDGADOJB_00105 8.4e-27
PDGADOJB_00106 7e-117 plnP S CAAX protease self-immunity
PDGADOJB_00107 3.9e-226 M Glycosyl transferase family 2
PDGADOJB_00109 2.8e-28
PDGADOJB_00110 3.5e-24 plnJ
PDGADOJB_00111 5.2e-23 plnK
PDGADOJB_00112 1.7e-117
PDGADOJB_00113 2.9e-17 plnR
PDGADOJB_00114 7.2e-32
PDGADOJB_00116 2.1e-208 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PDGADOJB_00117 3.2e-256 brnQ U Component of the transport system for branched-chain amino acids
PDGADOJB_00119 1.4e-150 S hydrolase
PDGADOJB_00120 3.3e-166 K Transcriptional regulator
PDGADOJB_00121 6.9e-147 3.1.3.102, 3.1.3.104 G Sucrose-6F-phosphate phosphohydrolase
PDGADOJB_00122 4.8e-197 uhpT EGP Major facilitator Superfamily
PDGADOJB_00123 9.6e-120 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PDGADOJB_00124 2.4e-38
PDGADOJB_00125 5.6e-68 S Immunity protein 63
PDGADOJB_00126 1.2e-64
PDGADOJB_00127 1.7e-39
PDGADOJB_00128 6.5e-33
PDGADOJB_00129 1.4e-175
PDGADOJB_00130 3.4e-32 M dTDP-4-dehydrorhamnose reductase activity
PDGADOJB_00131 0.0 M domain protein
PDGADOJB_00132 4.7e-134 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PDGADOJB_00133 0.0 glpD 1.1.3.21, 1.1.5.3 C C-terminal domain of alpha-glycerophosphate oxidase
PDGADOJB_00134 1.1e-299 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PDGADOJB_00135 2.6e-255 gshR 1.8.1.7 C Glutathione reductase
PDGADOJB_00136 9.9e-180 proV E ABC transporter, ATP-binding protein
PDGADOJB_00137 1.8e-276 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PDGADOJB_00138 3.8e-78 3.1.26.4 L RNA-DNA hybrid ribonuclease activity
PDGADOJB_00139 3.3e-161 vdlC S Belongs to the short-chain dehydrogenases reductases (SDR) family
PDGADOJB_00140 4.5e-174 rihC 3.2.2.1 F Nucleoside
PDGADOJB_00141 1.4e-69 accB 2.3.1.12 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PDGADOJB_00142 9.3e-80
PDGADOJB_00143 9.3e-83 ywnA K Winged helix-turn-helix transcription repressor, HrcA DNA-binding
PDGADOJB_00144 4.7e-232 flhF N Uncharacterized conserved protein (DUF2075)
PDGADOJB_00145 8.8e-95 yxkA S Phosphatidylethanolamine-binding protein
PDGADOJB_00146 1.1e-54 ypaA S Protein of unknown function (DUF1304)
PDGADOJB_00147 1.5e-310 mco Q Multicopper oxidase
PDGADOJB_00148 2.7e-120 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PDGADOJB_00149 6.3e-102 zmp1 O Zinc-dependent metalloprotease
PDGADOJB_00150 3.7e-44
PDGADOJB_00151 1.6e-177 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PDGADOJB_00152 2.3e-240 amtB P ammonium transporter
PDGADOJB_00153 2.1e-258 P Major Facilitator Superfamily
PDGADOJB_00154 3.7e-85 K Transcriptional regulator PadR-like family
PDGADOJB_00155 8.4e-44
PDGADOJB_00156 1e-201 tagH 3.6.3.38, 3.6.3.40 GM Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PDGADOJB_00157 3.5e-154 tagG U Transport permease protein
PDGADOJB_00158 2.2e-218
PDGADOJB_00159 4.2e-225 mtnE 2.6.1.83 E Aminotransferase
PDGADOJB_00160 7.7e-148 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PDGADOJB_00161 1.1e-86 metI U Binding-protein-dependent transport system inner membrane component
PDGADOJB_00162 1.1e-125 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PDGADOJB_00163 2.2e-111 metQ P NLPA lipoprotein
PDGADOJB_00164 1.4e-178 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PDGADOJB_00165 6.8e-96 bioY S BioY family
PDGADOJB_00166 3e-40
PDGADOJB_00167 1.7e-281 pipD E Dipeptidase
PDGADOJB_00168 3e-30
PDGADOJB_00169 3e-122 qmcA O prohibitin homologues
PDGADOJB_00170 2.3e-240 xylP1 G MFS/sugar transport protein
PDGADOJB_00172 2.8e-162 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PDGADOJB_00173 1.1e-256 adhE 1.1.1.1, 1.2.1.10 C Aldehyde dehydrogenase family
PDGADOJB_00174 1.9e-189
PDGADOJB_00175 2e-163 ytrB V ABC transporter
PDGADOJB_00176 1.4e-59 ytrA K helix_turn_helix gluconate operon transcriptional repressor
PDGADOJB_00177 8.1e-22
PDGADOJB_00178 8e-91 K acetyltransferase
PDGADOJB_00179 1e-84 K GNAT family
PDGADOJB_00180 1.1e-83 6.3.3.2 S ASCH
PDGADOJB_00181 8.5e-96 puuR K Cupin domain
PDGADOJB_00182 1.5e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PDGADOJB_00183 2e-149 potB P ABC transporter permease
PDGADOJB_00184 3.4e-141 potC P ABC transporter permease
PDGADOJB_00185 4e-206 potD P ABC transporter
PDGADOJB_00186 7.1e-21 U Preprotein translocase subunit SecB
PDGADOJB_00187 2.2e-30
PDGADOJB_00188 9.4e-08 S Motility quorum-sensing regulator, toxin of MqsA
PDGADOJB_00189 3.1e-38
PDGADOJB_00190 3e-226 ndh 1.6.99.3 C NADH dehydrogenase
PDGADOJB_00191 1.7e-75 K Transcriptional regulator
PDGADOJB_00192 5e-78 elaA S GNAT family
PDGADOJB_00193 8.9e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDGADOJB_00194 6.8e-57
PDGADOJB_00195 0.0 dinG 3.1.12.1, 3.6.4.12 KL DEAD_2
PDGADOJB_00196 3.7e-131
PDGADOJB_00197 5.7e-177 sepS16B
PDGADOJB_00198 2.2e-66 gcvH E Glycine cleavage H-protein
PDGADOJB_00199 1.2e-29 lytE M LysM domain protein
PDGADOJB_00200 1.7e-52 M Lysin motif
PDGADOJB_00201 4.5e-121 S CAAX protease self-immunity
PDGADOJB_00202 2.5e-114 V CAAX protease self-immunity
PDGADOJB_00203 7.1e-121 yclH V ABC transporter
PDGADOJB_00204 1.7e-194 yclI V MacB-like periplasmic core domain
PDGADOJB_00205 0.0 XK27_00720 S Leucine-rich repeat (LRR) protein
PDGADOJB_00206 1e-107 tag 3.2.2.20 L glycosylase
PDGADOJB_00207 0.0 ydgH S MMPL family
PDGADOJB_00208 3.1e-104 K transcriptional regulator
PDGADOJB_00209 2.7e-123 2.7.6.5 S RelA SpoT domain protein
PDGADOJB_00210 1.3e-47
PDGADOJB_00211 2e-258 loxD 1.1.3.15 C FAD linked oxidases, C-terminal domain
PDGADOJB_00212 1.4e-184 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PDGADOJB_00213 2.1e-41
PDGADOJB_00214 1.7e-56
PDGADOJB_00215 7.3e-242 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDGADOJB_00216 1e-128 yidA K Helix-turn-helix domain, rpiR family
PDGADOJB_00217 1.8e-49
PDGADOJB_00218 4.4e-129 K Transcriptional regulatory protein, C terminal
PDGADOJB_00219 6.8e-251 T PhoQ Sensor
PDGADOJB_00220 3.3e-65 K helix_turn_helix, mercury resistance
PDGADOJB_00221 9.7e-253 ydiC1 EGP Major facilitator Superfamily
PDGADOJB_00222 1e-40
PDGADOJB_00223 5.2e-42
PDGADOJB_00224 5.5e-118
PDGADOJB_00225 8.5e-233 mntH P H( )-stimulated, divalent metal cation uptake system
PDGADOJB_00226 4.3e-121 K Bacterial regulatory proteins, tetR family
PDGADOJB_00227 1.8e-72 K Transcriptional regulator
PDGADOJB_00228 4.6e-70
PDGADOJB_00229 1.1e-99 ubiX 2.5.1.129 H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
PDGADOJB_00230 9.2e-144
PDGADOJB_00231 0.0 pts4ABC 2.7.1.193, 2.7.1.211 G phosphotransferase system, EIIB
PDGADOJB_00232 0.0 treB 2.7.1.193, 2.7.1.211 G phosphotransferase system
PDGADOJB_00233 0.0 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
PDGADOJB_00234 3.5e-129 treR K UTRA
PDGADOJB_00235 3.7e-42
PDGADOJB_00236 7.3e-43 S Protein of unknown function (DUF2089)
PDGADOJB_00237 4.3e-141 pnuC H nicotinamide mononucleotide transporter
PDGADOJB_00238 7.8e-159 map 3.4.11.18 E Methionine Aminopeptidase
PDGADOJB_00239 2.2e-165 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PDGADOJB_00240 2.4e-209 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PDGADOJB_00241 1.6e-94 cysE 2.3.1.30 E Bacterial transferase hexapeptide (six repeats)
PDGADOJB_00242 4.5e-191 kdgK 2.7.1.45 G pfkB family carbohydrate kinase
PDGADOJB_00243 4.6e-129 4.1.2.14 S KDGP aldolase
PDGADOJB_00244 1.4e-201 selA 2.9.1.1 H L-seryl-tRNA selenium transferase
PDGADOJB_00245 2.3e-212 dho 3.5.2.3 S Amidohydrolase family
PDGADOJB_00246 8.5e-212 S Bacterial protein of unknown function (DUF871)
PDGADOJB_00247 4.7e-39
PDGADOJB_00248 5.1e-229 pts3C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDGADOJB_00249 2.3e-122 K helix_turn_helix gluconate operon transcriptional repressor
PDGADOJB_00250 5.4e-98 yieF S NADPH-dependent FMN reductase
PDGADOJB_00251 7.6e-255 S Uncharacterized protein conserved in bacteria (DUF2252)
PDGADOJB_00252 5e-81 ndk 2.7.4.6 F Belongs to the NDK family
PDGADOJB_00253 2e-62
PDGADOJB_00254 6.6e-96
PDGADOJB_00255 1.1e-50
PDGADOJB_00256 1.4e-56 trxA1 O Belongs to the thioredoxin family
PDGADOJB_00257 2.1e-73
PDGADOJB_00258 4.3e-222 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
PDGADOJB_00259 1.7e-78 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDGADOJB_00260 0.0 mtlR K Mga helix-turn-helix domain
PDGADOJB_00261 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
PDGADOJB_00262 2.6e-277 pipD E Dipeptidase
PDGADOJB_00263 4.8e-99 K Helix-turn-helix domain
PDGADOJB_00264 5.9e-224 1.3.5.4 C FAD dependent oxidoreductase
PDGADOJB_00265 4.5e-174 P Major Facilitator Superfamily
PDGADOJB_00266 7.4e-132 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PDGADOJB_00267 1e-69
PDGADOJB_00268 4e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDGADOJB_00269 2.6e-157 dkgB S reductase
PDGADOJB_00270 1.4e-89 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
PDGADOJB_00271 9.2e-101 S ABC transporter permease
PDGADOJB_00272 1.5e-258 P ABC transporter
PDGADOJB_00273 8.9e-116 P cobalt transport
PDGADOJB_00274 2.3e-260 S ATPases associated with a variety of cellular activities
PDGADOJB_00275 8.5e-50 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDGADOJB_00276 3.5e-58 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDGADOJB_00278 4.5e-219 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDGADOJB_00279 4e-164 FbpA K Domain of unknown function (DUF814)
PDGADOJB_00280 1.3e-60 S Domain of unknown function (DU1801)
PDGADOJB_00281 4.9e-34
PDGADOJB_00282 1e-179 yghZ C Aldo keto reductase family protein
PDGADOJB_00283 3e-113 pgm1 G phosphoglycerate mutase
PDGADOJB_00284 7e-203 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PDGADOJB_00285 2.3e-215 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDGADOJB_00286 1.7e-78 yiaC K Acetyltransferase (GNAT) domain
PDGADOJB_00287 3.5e-310 oppA E ABC transporter, substratebinding protein
PDGADOJB_00288 0.0 oppA E ABC transporter, substratebinding protein
PDGADOJB_00289 2.1e-157 hipB K Helix-turn-helix
PDGADOJB_00291 0.0 3.6.4.13 M domain protein
PDGADOJB_00292 2.9e-165 mleR K LysR substrate binding domain
PDGADOJB_00293 0.0 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
PDGADOJB_00294 1.1e-217 nhaC C Na H antiporter NhaC
PDGADOJB_00295 1.3e-165 3.5.1.10 C nadph quinone reductase
PDGADOJB_00296 0.0 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
PDGADOJB_00297 9.1e-173 scrR K Transcriptional regulator, LacI family
PDGADOJB_00298 1.4e-305 scrB 3.2.1.26 GH32 G invertase
PDGADOJB_00299 0.0 scrA 2.7.1.193, 2.7.1.211, 5.3.1.1 G phosphotransferase system
PDGADOJB_00300 1.8e-169 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PDGADOJB_00301 1.5e-45 ygbF S Sugar efflux transporter for intercellular exchange
PDGADOJB_00302 0.0 3.2.1.96 G Glycosyl hydrolase family 85
PDGADOJB_00303 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PDGADOJB_00304 4e-209 msmK P Belongs to the ABC transporter superfamily
PDGADOJB_00305 5.9e-260 malS 3.2.1.1 GH13 G Glycogen debranching enzyme, glucanotransferase domain
PDGADOJB_00306 5.3e-150 malA S maltodextrose utilization protein MalA
PDGADOJB_00307 1.4e-161 malD P ABC transporter permease
PDGADOJB_00308 1.1e-226 malC P Binding-protein-dependent transport system inner membrane component
PDGADOJB_00309 2.1e-230 mdxE G Bacterial extracellular solute-binding protein
PDGADOJB_00310 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
PDGADOJB_00311 2e-180 yvdE K helix_turn _helix lactose operon repressor
PDGADOJB_00312 1e-190 malR K Transcriptional regulator, LacI family
PDGADOJB_00313 8.6e-133 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PDGADOJB_00314 9e-57 dhaM 2.7.1.121 S PTS system fructose IIA component
PDGADOJB_00315 1.9e-101 dhaL 2.7.1.121 S Dak2
PDGADOJB_00316 1.9e-186 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PDGADOJB_00317 2.4e-189 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PDGADOJB_00318 1.1e-92 K Bacterial regulatory proteins, tetR family
PDGADOJB_00320 8.6e-74 folT 2.7.13.3 T ECF transporter, substrate-specific component
PDGADOJB_00321 5.8e-275 C Electron transfer flavoprotein FAD-binding domain
PDGADOJB_00322 3.1e-116 K Transcriptional regulator
PDGADOJB_00323 1e-298 M Exporter of polyketide antibiotics
PDGADOJB_00324 6.7e-170 yjjC V ABC transporter
PDGADOJB_00325 1.2e-143 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
PDGADOJB_00326 9.1e-89
PDGADOJB_00327 2.6e-149
PDGADOJB_00328 1.9e-141
PDGADOJB_00329 8.3e-54 K Transcriptional regulator PadR-like family
PDGADOJB_00330 1.6e-129 K UbiC transcription regulator-associated domain protein
PDGADOJB_00332 2.5e-98 S UPF0397 protein
PDGADOJB_00333 0.0 ykoD P ABC transporter, ATP-binding protein
PDGADOJB_00334 5.4e-150 cbiQ P cobalt transport
PDGADOJB_00335 1.1e-175 C Oxidoreductase
PDGADOJB_00336 7.5e-259
PDGADOJB_00337 5e-52
PDGADOJB_00338 0.0 lai 4.2.1.53 S Myosin-crossreactive antigen
PDGADOJB_00339 1.3e-81 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase like
PDGADOJB_00340 1.2e-165 1.1.1.65 C Aldo keto reductase
PDGADOJB_00341 1.5e-155 S reductase
PDGADOJB_00343 8.1e-216 yeaN P Transporter, major facilitator family protein
PDGADOJB_00344 5e-51 cadC1 K helix_turn_helix, Arsenical Resistance Operon Repressor
PDGADOJB_00345 4.7e-227 mdtG EGP Major facilitator Superfamily
PDGADOJB_00346 6.1e-67 K LytTr DNA-binding domain
PDGADOJB_00347 8.7e-30 S Protein of unknown function (DUF3021)
PDGADOJB_00348 1.7e-72 hsp1 O Belongs to the small heat shock protein (HSP20) family
PDGADOJB_00349 1.2e-74 papX3 K Transcriptional regulator
PDGADOJB_00350 7.2e-112 S NADPH-dependent FMN reductase
PDGADOJB_00351 1.6e-28 KT PspC domain
PDGADOJB_00352 0.0 pacL1 P P-type ATPase
PDGADOJB_00353 1.1e-149 ydjP I Alpha/beta hydrolase family
PDGADOJB_00354 2.1e-123
PDGADOJB_00355 2.6e-250 yifK E Amino acid permease
PDGADOJB_00356 9.9e-85 F NUDIX domain
PDGADOJB_00357 1.8e-303 L HIRAN domain
PDGADOJB_00358 1.5e-135 S peptidase C26
PDGADOJB_00359 5.8e-206 cytX U Belongs to the purine-cytosine permease (2.A.39) family
PDGADOJB_00360 1.5e-110 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PDGADOJB_00361 2.6e-149 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PDGADOJB_00362 1.3e-137 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PDGADOJB_00364 4.2e-178 1.6.5.5 C Zinc-binding dehydrogenase
PDGADOJB_00365 2.8e-151 larE S NAD synthase
PDGADOJB_00366 1.5e-132 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PDGADOJB_00367 5e-75 larC 4.99.1.12 S Protein of unknown function DUF111
PDGADOJB_00368 6.3e-132 larC 4.99.1.12 S Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
PDGADOJB_00369 5.3e-122 larB S AIR carboxylase
PDGADOJB_00370 1e-240 larA 5.1.2.1 S Domain of unknown function (DUF2088)
PDGADOJB_00371 4.2e-121 K Crp-like helix-turn-helix domain
PDGADOJB_00372 4.8e-182 nikMN P PDGLE domain
PDGADOJB_00373 2.6e-149 P Cobalt transport protein
PDGADOJB_00374 3.9e-128 cbiO P ABC transporter
PDGADOJB_00375 4.8e-40
PDGADOJB_00376 7e-110 2.7.7.47 H Mediates bacterial resistance to the antibiotics streptomycin and spectomycin
PDGADOJB_00378 1.2e-140
PDGADOJB_00379 4.6e-311 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
PDGADOJB_00380 6e-76
PDGADOJB_00381 1e-139 S Belongs to the UPF0246 family
PDGADOJB_00382 1.9e-166 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
PDGADOJB_00383 3.9e-235 mepA V MATE efflux family protein
PDGADOJB_00384 9.3e-50 K helix_turn_helix, Arsenical Resistance Operon Repressor
PDGADOJB_00385 5.4e-181 1.1.1.1 C nadph quinone reductase
PDGADOJB_00386 2e-126 hchA S DJ-1/PfpI family
PDGADOJB_00387 3.6e-93 MA20_25245 K FR47-like protein
PDGADOJB_00388 3.6e-152 EG EamA-like transporter family
PDGADOJB_00389 2.7e-61 S Protein of unknown function
PDGADOJB_00390 2e-37 S Protein of unknown function
PDGADOJB_00391 0.0 tetP J elongation factor G
PDGADOJB_00392 1e-116 azoR C Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PDGADOJB_00393 5.5e-172 yobV1 K WYL domain
PDGADOJB_00394 1.4e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
PDGADOJB_00395 2.9e-81 6.3.3.2 S ASCH
PDGADOJB_00396 1.4e-254 1.14.14.9 Q 4-hydroxyphenylacetate
PDGADOJB_00397 1.7e-134 wzb 3.1.3.48 T Tyrosine phosphatase family
PDGADOJB_00398 7.4e-250 yjjP S Putative threonine/serine exporter
PDGADOJB_00399 1.1e-194 pva1 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PDGADOJB_00400 5.5e-121 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PDGADOJB_00401 1.3e-290 QT PucR C-terminal helix-turn-helix domain
PDGADOJB_00402 1.3e-122 drgA C Nitroreductase family
PDGADOJB_00403 6.4e-159 adc 4.1.1.4 Q Acetoacetate decarboxylase (ADC)
PDGADOJB_00404 2.3e-164 ptlF S KR domain
PDGADOJB_00405 1.1e-74 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PDGADOJB_00406 3e-72 C FMN binding
PDGADOJB_00407 5.7e-158 K LysR family
PDGADOJB_00408 1.6e-258 P Sodium:sulfate symporter transmembrane region
PDGADOJB_00409 0.0 nqr 1.3.5.4, 1.5.1.36 C FMN_bind
PDGADOJB_00410 1.8e-116 S Elongation factor G-binding protein, N-terminal
PDGADOJB_00411 5.2e-65 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
PDGADOJB_00412 8.2e-122 pnb C nitroreductase
PDGADOJB_00413 1.8e-121 ung2 3.2.2.27 L Uracil-DNA glycosylase
PDGADOJB_00414 2.2e-168 L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
PDGADOJB_00415 1.7e-260 calB 1.2.1.68 C Belongs to the aldehyde dehydrogenase family
PDGADOJB_00416 1.5e-95 K Bacterial regulatory proteins, tetR family
PDGADOJB_00417 3.6e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PDGADOJB_00418 6.8e-173 htrA 3.4.21.107 O serine protease
PDGADOJB_00419 8.9e-158 vicX 3.1.26.11 S domain protein
PDGADOJB_00420 2.2e-151 yycI S YycH protein
PDGADOJB_00421 1.2e-244 yycH S YycH protein
PDGADOJB_00422 0.0 vicK 2.7.13.3 T Histidine kinase
PDGADOJB_00423 6.2e-131 K response regulator
PDGADOJB_00425 1.7e-37
PDGADOJB_00426 1.6e-31 cspA K Cold shock protein domain
PDGADOJB_00427 1.3e-78 S Pyridoxamine 5'-phosphate oxidase
PDGADOJB_00428 0.0 trePP 2.4.1.216, 2.4.1.8, 3.1.3.12, 3.2.1.28 GH37,GH65 G Glycosyl hydrolase family 65 central catalytic domain
PDGADOJB_00429 1e-119 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PDGADOJB_00430 1.7e-142 S haloacid dehalogenase-like hydrolase
PDGADOJB_00432 0.0 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
PDGADOJB_00433 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PDGADOJB_00434 1.8e-278 glgA 2.4.1.21 GT5 F Synthesizes alpha-1,4-glucan chains using ADP-glucose
PDGADOJB_00435 8.2e-197 glgD 2.4.1.21, 2.7.7.27 GT5 G Nucleotidyl transferase
PDGADOJB_00436 1.5e-214 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PDGADOJB_00437 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PDGADOJB_00438 1.9e-276 E ABC transporter, substratebinding protein
PDGADOJB_00440 1.9e-228 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PDGADOJB_00441 3.6e-143 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PDGADOJB_00442 3.7e-224 yttB EGP Major facilitator Superfamily
PDGADOJB_00443 1.1e-240 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PDGADOJB_00444 1.4e-67 rplI J Binds to the 23S rRNA
PDGADOJB_00445 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PDGADOJB_00446 6.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PDGADOJB_00447 6.8e-62 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PDGADOJB_00448 1.5e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
PDGADOJB_00449 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDGADOJB_00450 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDGADOJB_00451 1.9e-206 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PDGADOJB_00452 5e-37 yaaA S S4 domain protein YaaA
PDGADOJB_00453 1e-207 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PDGADOJB_00454 9.1e-256 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PDGADOJB_00455 6.4e-57 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PDGADOJB_00456 1.8e-105 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PDGADOJB_00457 7.7e-310 E ABC transporter, substratebinding protein
PDGADOJB_00458 9.3e-239 Q Imidazolonepropionase and related amidohydrolases
PDGADOJB_00459 5e-123 jag S R3H domain protein
PDGADOJB_00460 4.6e-255 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PDGADOJB_00461 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PDGADOJB_00462 6.9e-93 S Cell surface protein
PDGADOJB_00463 3.6e-159 S Bacterial protein of unknown function (DUF916)
PDGADOJB_00465 1.1e-302
PDGADOJB_00466 3.6e-108 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PDGADOJB_00468 1.5e-255 pepC 3.4.22.40 E aminopeptidase
PDGADOJB_00469 9.3e-58 2.6.1.2, 2.6.1.66 K Bacteriophage CI repressor helix-turn-helix domain
PDGADOJB_00470 3.6e-157 degV S DegV family
PDGADOJB_00471 2.2e-87 yjaB_1 K Acetyltransferase (GNAT) domain
PDGADOJB_00472 6.7e-142 tesE Q hydratase
PDGADOJB_00473 1.7e-104 padC Q Phenolic acid decarboxylase
PDGADOJB_00474 2.2e-99 padR K Virulence activator alpha C-term
PDGADOJB_00475 2.7e-79 T Universal stress protein family
PDGADOJB_00476 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PDGADOJB_00477 5.9e-188 rbsR K helix_turn _helix lactose operon repressor
PDGADOJB_00478 2.3e-162 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PDGADOJB_00479 1e-66 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PDGADOJB_00480 2.7e-160 rbsU U ribose uptake protein RbsU
PDGADOJB_00481 3.8e-145 IQ NAD dependent epimerase/dehydratase family
PDGADOJB_00482 0.0 srlM 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Mga helix-turn-helix domain
PDGADOJB_00483 1.1e-86 gutM K Glucitol operon activator protein (GutM)
PDGADOJB_00484 2e-100 srlA G PTS system enzyme II sorbitol-specific factor
PDGADOJB_00485 1.5e-173 srlE 2.7.1.198 G Sorbitol phosphotransferase enzyme II N-terminus
PDGADOJB_00486 8.6e-63 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PDGADOJB_00487 6.8e-156 lrp QT PucR C-terminal helix-turn-helix domain
PDGADOJB_00488 2.2e-193 rliB K helix_turn_helix gluconate operon transcriptional repressor
PDGADOJB_00489 0.0 yknV V ABC transporter
PDGADOJB_00490 0.0 mdlA2 V ABC transporter
PDGADOJB_00491 4.2e-155 K AraC-like ligand binding domain
PDGADOJB_00492 0.0 3.2.1.52 GH20 G Glycosyl hydrolase family 20, catalytic domain
PDGADOJB_00493 5.2e-181 U Binding-protein-dependent transport system inner membrane component
PDGADOJB_00494 1.5e-161 lplC U Binding-protein-dependent transport system inner membrane component
PDGADOJB_00495 9.8e-280 G Domain of unknown function (DUF3502)
PDGADOJB_00496 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
PDGADOJB_00497 4.1e-107 ypcB S integral membrane protein
PDGADOJB_00498 0.0 yesM 2.7.13.3 T Histidine kinase
PDGADOJB_00499 6.3e-271 yesN K helix_turn_helix, arabinose operon control protein
PDGADOJB_00500 2.1e-165 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PDGADOJB_00501 9.1e-217 msmX P Belongs to the ABC transporter superfamily
PDGADOJB_00502 0.0 ypdD G Glycosyl hydrolase family 92
PDGADOJB_00503 1e-193 rliB K Transcriptional regulator
PDGADOJB_00504 3.1e-253 S Metal-independent alpha-mannosidase (GH125)
PDGADOJB_00505 0.0 mngB 2.3.1.204, 3.2.1.170, 3.2.1.24 GH38 G Glycosyl hydrolases family 38 N-terminal domain
PDGADOJB_00506 2.1e-160 ypbG 2.7.1.2 GK ROK family
PDGADOJB_00507 5.9e-287 bgl 3.2.1.21, 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDGADOJB_00508 5.4e-74 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
PDGADOJB_00509 2.6e-105 M Glycosyl hydrolases family 25
PDGADOJB_00512 3e-252 dtpT U amino acid peptide transporter
PDGADOJB_00513 2e-151 yjjH S Calcineurin-like phosphoesterase
PDGADOJB_00517 1.2e-49 5.3.3.19 S Cupin 2, conserved barrel domain protein
PDGADOJB_00518 3.2e-53 S Cupin domain
PDGADOJB_00519 2.7e-165 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
PDGADOJB_00520 4.7e-194 ybiR P Citrate transporter
PDGADOJB_00521 1.6e-151 pnuC H nicotinamide mononucleotide transporter
PDGADOJB_00522 1.7e-137 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PDGADOJB_00523 6.1e-221 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PDGADOJB_00524 1.6e-123 gntR1 K UbiC transcription regulator-associated domain protein
PDGADOJB_00525 1.2e-137 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PDGADOJB_00526 5.2e-289 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDGADOJB_00527 4.7e-154 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PDGADOJB_00528 0.0 pacL 3.6.3.8 P P-type ATPase
PDGADOJB_00529 3.4e-71
PDGADOJB_00530 0.0 yhgF K Tex-like protein N-terminal domain protein
PDGADOJB_00531 1.8e-80 ydcK S Belongs to the SprT family
PDGADOJB_00532 4e-237 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
PDGADOJB_00533 3.1e-156 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PDGADOJB_00535 6.4e-156 G Peptidase_C39 like family
PDGADOJB_00536 1.3e-168 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PDGADOJB_00537 4.9e-132 manY G PTS system
PDGADOJB_00538 3.6e-171 manN G system, mannose fructose sorbose family IID component
PDGADOJB_00539 4.7e-64 S Domain of unknown function (DUF956)
PDGADOJB_00540 0.0 levR K Sigma-54 interaction domain
PDGADOJB_00541 8.6e-72 pts10A 2.7.1.191 G PTS system fructose IIA component
PDGADOJB_00542 3.1e-87 pts10B 2.7.1.191, 2.7.1.202 G PTS system sorbose subfamily IIB component
PDGADOJB_00543 5.4e-178 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PDGADOJB_00544 9.7e-65 accB 2.3.1.12 I Biotin-requiring enzyme
PDGADOJB_00545 3.4e-247 accC2 6.3.4.14, 6.4.1.2 I Biotin carboxylase C-terminal domain
PDGADOJB_00546 1.7e-140 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PDGADOJB_00547 1.8e-136 accA 2.1.3.15, 6.4.1.2 I Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
PDGADOJB_00548 4.8e-168 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PDGADOJB_00549 3.3e-167 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
PDGADOJB_00550 1.7e-177 EG EamA-like transporter family
PDGADOJB_00551 2.5e-129 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDGADOJB_00552 3.9e-113 zmp2 O Zinc-dependent metalloprotease
PDGADOJB_00553 7.3e-258 pepC 3.4.22.40 E Peptidase C1-like family
PDGADOJB_00554 3.2e-124 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PDGADOJB_00555 1.2e-51 HA62_12640 S GCN5-related N-acetyl-transferase
PDGADOJB_00556 2.1e-99 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
PDGADOJB_00557 1.3e-257 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PDGADOJB_00558 3.7e-205 yacL S domain protein
PDGADOJB_00559 8.9e-289 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PDGADOJB_00560 6.7e-270 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDGADOJB_00561 3.5e-70 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PDGADOJB_00562 3.3e-138 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDGADOJB_00563 5.3e-98 yacP S YacP-like NYN domain
PDGADOJB_00564 2.4e-101 sigH K Sigma-70 region 2
PDGADOJB_00565 6.5e-22 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PDGADOJB_00566 6.8e-29 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PDGADOJB_00567 3.7e-99 nusG K Participates in transcription elongation, termination and antitermination
PDGADOJB_00568 2.6e-158 S Alpha/beta hydrolase of unknown function (DUF915)
PDGADOJB_00569 2.4e-69 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PDGADOJB_00570 5.1e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PDGADOJB_00571 4.6e-80 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PDGADOJB_00572 9.9e-56 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PDGADOJB_00573 9.3e-178 F DNA/RNA non-specific endonuclease
PDGADOJB_00574 9.9e-38 L nuclease
PDGADOJB_00575 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PDGADOJB_00576 2.1e-108 yvdD 3.2.2.10 S Belongs to the LOG family
PDGADOJB_00577 2.2e-198 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDGADOJB_00578 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDGADOJB_00579 6.5e-37 nrdH O Glutaredoxin
PDGADOJB_00580 5.7e-109 rsmC 2.1.1.172 J Methyltransferase
PDGADOJB_00581 5.9e-91 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PDGADOJB_00582 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDGADOJB_00583 5.8e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PDGADOJB_00584 7.4e-109 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PDGADOJB_00585 2.2e-38 yaaL S Protein of unknown function (DUF2508)
PDGADOJB_00586 2.1e-240 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDGADOJB_00587 1.1e-50 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDGADOJB_00588 1.1e-40 ulaB_1 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
PDGADOJB_00589 2e-220 ulaA 2.7.1.194 S PTS system sugar-specific permease component
PDGADOJB_00590 2.5e-99 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
PDGADOJB_00591 8.7e-119 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PDGADOJB_00592 2.4e-53 yaaQ S Cyclic-di-AMP receptor
PDGADOJB_00593 3.3e-186 holB 2.7.7.7 L DNA polymerase III
PDGADOJB_00594 1e-57 yabA L Involved in initiation control of chromosome replication
PDGADOJB_00595 5.4e-164 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PDGADOJB_00596 2.1e-148 fat 3.1.2.21 I Acyl-ACP thioesterase
PDGADOJB_00597 2e-191 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PDGADOJB_00598 5.5e-211 phnW 2.5.1.49, 2.6.1.37, 3.11.1.1 E Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily
PDGADOJB_00599 5e-145 phnX 2.6.1.37, 3.1.3.18, 3.11.1.1 E Belongs to the HAD-like hydrolase superfamily. PhnX family
PDGADOJB_00600 1.7e-143 phnE1 3.6.1.63 U ABC transporter permease
PDGADOJB_00601 7.7e-138 phnE 3.6.1.63 U Phosphonate ABC transporter permease
PDGADOJB_00602 9.7e-138 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PDGADOJB_00603 5.1e-190 phnD P Phosphonate ABC transporter
PDGADOJB_00604 1.7e-128 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PDGADOJB_00605 6.7e-101 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PDGADOJB_00606 1e-81 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PDGADOJB_00607 1.5e-194 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PDGADOJB_00608 4.1e-297 uup S ABC transporter, ATP-binding protein
PDGADOJB_00609 1.4e-119 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PDGADOJB_00621 5.5e-08
PDGADOJB_00631 1.3e-90 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
PDGADOJB_00632 2.2e-139 yhfI S Metallo-beta-lactamase superfamily
PDGADOJB_00633 2.7e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PDGADOJB_00634 2.2e-131 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PDGADOJB_00635 7.6e-205 coiA 3.6.4.12 S Competence protein
PDGADOJB_00636 0.0 pepF E oligoendopeptidase F
PDGADOJB_00637 3.6e-114 yjbH Q Thioredoxin
PDGADOJB_00638 2.7e-120 yjbM 2.7.6.5 S RelA SpoT domain protein
PDGADOJB_00639 4.7e-151 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PDGADOJB_00640 8.9e-175 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
PDGADOJB_00641 5.1e-116 cutC P Participates in the control of copper homeostasis
PDGADOJB_00642 7.4e-194 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PDGADOJB_00643 3.9e-57 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PDGADOJB_00644 4.3e-206 XK27_05220 S AI-2E family transporter
PDGADOJB_00645 1.7e-41 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDGADOJB_00646 2.4e-161 rrmA 2.1.1.187 H Methyltransferase
PDGADOJB_00648 9.8e-210 brnQ U Component of the transport system for branched-chain amino acids
PDGADOJB_00649 3.1e-113 ywnB S NAD(P)H-binding
PDGADOJB_00650 1.8e-95 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PDGADOJB_00651 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PDGADOJB_00652 4.2e-175 corA P CorA-like Mg2+ transporter protein
PDGADOJB_00653 1.9e-62 S Protein of unknown function (DUF3397)
PDGADOJB_00654 1.9e-77 mraZ K Belongs to the MraZ family
PDGADOJB_00655 5.5e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PDGADOJB_00656 7.5e-54 ftsL D Cell division protein FtsL
PDGADOJB_00657 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PDGADOJB_00658 8.3e-179 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PDGADOJB_00659 3.6e-260 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PDGADOJB_00660 1.5e-197 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PDGADOJB_00661 5.8e-163 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PDGADOJB_00662 1e-243 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PDGADOJB_00663 1.4e-229 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PDGADOJB_00664 3.3e-71 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PDGADOJB_00665 1.2e-36 yggT S YGGT family
PDGADOJB_00666 9.9e-146 ylmH S S4 domain protein
PDGADOJB_00667 1.2e-86 divIVA D DivIVA domain protein
PDGADOJB_00668 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PDGADOJB_00669 8.8e-79 cylA V abc transporter atp-binding protein
PDGADOJB_00670 3.6e-80 cylB U ABC-2 type transporter
PDGADOJB_00671 2.9e-36 K LytTr DNA-binding domain
PDGADOJB_00672 9e-18 S Protein of unknown function (DUF3021)
PDGADOJB_00673 1.1e-189 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PDGADOJB_00674 5.6e-95 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PDGADOJB_00675 4.6e-28
PDGADOJB_00676 1.8e-122 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PDGADOJB_00677 1.9e-217 iscS 2.8.1.7 E Aminotransferase class V
PDGADOJB_00678 4.9e-57 XK27_04120 S Putative amino acid metabolism
PDGADOJB_00679 9e-225 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PDGADOJB_00680 1.3e-241 ktrB P Potassium uptake protein
PDGADOJB_00681 2.6e-115 ktrA P domain protein
PDGADOJB_00682 2.3e-120 N WxL domain surface cell wall-binding
PDGADOJB_00683 1.7e-193 S Bacterial protein of unknown function (DUF916)
PDGADOJB_00684 3.8e-268 N domain, Protein
PDGADOJB_00685 6e-120 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
PDGADOJB_00686 1.6e-120 S Repeat protein
PDGADOJB_00687 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PDGADOJB_00688 1.7e-171 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDGADOJB_00689 4.1e-108 mltD CBM50 M NlpC P60 family protein
PDGADOJB_00690 1.7e-28
PDGADOJB_00691 2.2e-187 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PDGADOJB_00692 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDGADOJB_00693 3.1e-33 ykzG S Belongs to the UPF0356 family
PDGADOJB_00694 1.6e-85
PDGADOJB_00695 3.1e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PDGADOJB_00696 1.6e-210 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
PDGADOJB_00697 4.5e-180 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
PDGADOJB_00698 1.8e-208 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PDGADOJB_00699 1.2e-266 lpdA 1.8.1.4 C Dehydrogenase
PDGADOJB_00700 8.1e-163 1.1.1.27 C L-malate dehydrogenase activity
PDGADOJB_00701 3.3e-46 yktA S Belongs to the UPF0223 family
PDGADOJB_00702 6.3e-137 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
PDGADOJB_00703 0.0 typA T GTP-binding protein TypA
PDGADOJB_00704 1.1e-197
PDGADOJB_00705 1.3e-72
PDGADOJB_00706 0.0 S Bacterial membrane protein YfhO
PDGADOJB_00707 2.7e-91
PDGADOJB_00708 4.6e-106 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PDGADOJB_00709 2.1e-188 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PDGADOJB_00710 6.3e-201 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PDGADOJB_00711 3.3e-227 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PDGADOJB_00712 2.8e-29 yajC U Preprotein translocase
PDGADOJB_00713 5.3e-217 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PDGADOJB_00714 7e-178 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PDGADOJB_00715 9.3e-245 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PDGADOJB_00716 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PDGADOJB_00717 2.4e-43 yrzL S Belongs to the UPF0297 family
PDGADOJB_00718 7.3e-74 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PDGADOJB_00719 1.6e-48 yrzB S Belongs to the UPF0473 family
PDGADOJB_00720 2.7e-36 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PDGADOJB_00721 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PDGADOJB_00722 3.3e-52 trxA O Belongs to the thioredoxin family
PDGADOJB_00723 7.6e-126 yslB S Protein of unknown function (DUF2507)
PDGADOJB_00724 4.1e-150 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PDGADOJB_00725 1e-110 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PDGADOJB_00726 1.2e-94 S Phosphoesterase
PDGADOJB_00727 6.5e-87 ykuL S (CBS) domain
PDGADOJB_00728 2.6e-76 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PDGADOJB_00729 1.1e-225 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PDGADOJB_00730 2.6e-158 ykuT M mechanosensitive ion channel
PDGADOJB_00731 1.9e-23 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PDGADOJB_00732 2.8e-56
PDGADOJB_00733 1.1e-80 K helix_turn_helix, mercury resistance
PDGADOJB_00734 1.7e-215 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PDGADOJB_00735 1.9e-181 ccpA K catabolite control protein A
PDGADOJB_00736 5.2e-164 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
PDGADOJB_00737 5.4e-50 S DsrE/DsrF-like family
PDGADOJB_00738 8.5e-10 dpnA 2.1.1.72 L DNA methylase
PDGADOJB_00739 2.9e-38 3.1.21.4 L Recognizes the double-stranded unmethylated sequence GATC and cleaves before G-1
PDGADOJB_00740 4e-30
PDGADOJB_00741 1.7e-24
PDGADOJB_00742 6.9e-83 dpnA 2.1.1.72 L DNA methylase
PDGADOJB_00743 6.4e-80 dam 2.1.1.72 H Site-specific DNA-methyltransferase (Adenine-specific)
PDGADOJB_00744 9e-41 L Resolvase, N terminal domain
PDGADOJB_00746 2.9e-17 mltD GH19 M Chitinase class I
PDGADOJB_00747 2.8e-56 V Abi-like protein
PDGADOJB_00757 2e-55
PDGADOJB_00759 7.2e-08 S Restriction endonuclease
PDGADOJB_00765 8.3e-131 yebC K Transcriptional regulatory protein
PDGADOJB_00766 1.4e-159 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PDGADOJB_00767 5.6e-175 comGA NU Type II IV secretion system protein
PDGADOJB_00768 1.9e-189 comGB NU type II secretion system
PDGADOJB_00769 5.5e-43 comGC U competence protein ComGC
PDGADOJB_00770 3.5e-82 gspG NU general secretion pathway protein
PDGADOJB_00771 8.6e-20
PDGADOJB_00772 4.5e-88 S Prokaryotic N-terminal methylation motif
PDGADOJB_00774 3.6e-186 ytxK 2.1.1.72 L N-6 DNA Methylase
PDGADOJB_00775 7e-220 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDGADOJB_00776 5.6e-253 cycA E Amino acid permease
PDGADOJB_00777 4.4e-117 S Calcineurin-like phosphoesterase
PDGADOJB_00778 1.3e-270 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PDGADOJB_00779 1.5e-80 yutD S Protein of unknown function (DUF1027)
PDGADOJB_00780 1.5e-146 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PDGADOJB_00781 2.1e-117 S Protein of unknown function (DUF1461)
PDGADOJB_00782 3e-119 dedA S SNARE-like domain protein
PDGADOJB_00783 5.5e-109 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PDGADOJB_00784 1.6e-75 yugI 5.3.1.9 J general stress protein
PDGADOJB_00785 1.7e-63
PDGADOJB_00786 1.2e-103
PDGADOJB_00787 5.1e-259 ica2 GT2 M Glycosyl transferase family group 2
PDGADOJB_00788 2.2e-293
PDGADOJB_00789 1.6e-205 ftsW D Belongs to the SEDS family
PDGADOJB_00790 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PDGADOJB_00791 1.5e-49 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
PDGADOJB_00792 1.1e-101 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PDGADOJB_00793 1.4e-84 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PDGADOJB_00794 9.6e-197 ylbL T Belongs to the peptidase S16 family
PDGADOJB_00795 5e-67 comEA L Competence protein ComEA
PDGADOJB_00796 4e-47 comEA L Competence protein ComEA
PDGADOJB_00797 6.4e-79 comEB 3.5.4.12 F ComE operon protein 2
PDGADOJB_00798 0.0 comEC S Competence protein ComEC
PDGADOJB_00799 3.1e-187 holA 2.7.7.7 L DNA polymerase III delta subunit
PDGADOJB_00800 1.5e-34 rpsT J Binds directly to 16S ribosomal RNA
PDGADOJB_00801 6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PDGADOJB_00802 1.3e-192 mdtG EGP Major Facilitator Superfamily
PDGADOJB_00803 6.2e-157 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PDGADOJB_00804 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDGADOJB_00805 1.1e-159 S Tetratricopeptide repeat
PDGADOJB_00806 6.1e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PDGADOJB_00807 4.1e-213 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PDGADOJB_00808 3.3e-236 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PDGADOJB_00809 5.1e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
PDGADOJB_00810 2.2e-49 MA20_27270 S mazG nucleotide pyrophosphohydrolase
PDGADOJB_00811 9.9e-73 S Iron-sulphur cluster biosynthesis
PDGADOJB_00812 4.3e-22
PDGADOJB_00813 9.2e-270 glnPH2 P ABC transporter permease
PDGADOJB_00814 1.3e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDGADOJB_00815 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PDGADOJB_00816 2.9e-126 epsB M biosynthesis protein
PDGADOJB_00817 7.3e-124 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PDGADOJB_00818 7.9e-146 ywqE 3.1.3.48 GM PHP domain protein
PDGADOJB_00819 9.6e-180 cps4D 5.1.3.2 M RmlD substrate binding domain
PDGADOJB_00820 2.7e-128 tuaA M Bacterial sugar transferase
PDGADOJB_00821 1.2e-202 cps4F 2.4.1.21, 2.4.1.306 GT4,GT5 M Glycosyl transferases group 1
PDGADOJB_00822 2.9e-190 cps4G M Glycosyltransferase Family 4
PDGADOJB_00823 5.4e-234
PDGADOJB_00824 2.7e-177 cps4I M Glycosyltransferase like family 2
PDGADOJB_00825 1.9e-264 cps4J S Polysaccharide biosynthesis protein
PDGADOJB_00826 1.6e-252 cpdA S Calcineurin-like phosphoesterase
PDGADOJB_00827 6.7e-292 fruA 2.7.1.194, 2.7.1.200, 2.7.1.202 GT Phosphotransferase System
PDGADOJB_00828 4.6e-171 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PDGADOJB_00829 1.5e-135 fruR K DeoR C terminal sensor domain
PDGADOJB_00830 2.4e-245 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PDGADOJB_00831 3.2e-46
PDGADOJB_00832 2.8e-179 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PDGADOJB_00833 4e-139 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PDGADOJB_00834 2e-50 yrvD S Lipopolysaccharide assembly protein A domain
PDGADOJB_00835 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PDGADOJB_00836 2.9e-93 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PDGADOJB_00837 2.5e-74 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
PDGADOJB_00838 5.8e-52
PDGADOJB_00839 7.3e-34
PDGADOJB_00840 4.5e-85 K Acetyltransferase (GNAT) domain
PDGADOJB_00841 3.3e-187 L Psort location Cytoplasmic, score
PDGADOJB_00842 6.9e-33
PDGADOJB_00843 4.1e-273 traI 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PDGADOJB_00844 0.0 L MobA MobL family protein
PDGADOJB_00845 2.5e-27
PDGADOJB_00846 4e-41
PDGADOJB_00847 4.3e-86
PDGADOJB_00848 1.1e-43 relB L Addiction module antitoxin, RelB DinJ family
PDGADOJB_00849 3.2e-36 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PDGADOJB_00850 6.5e-145 D CobQ CobB MinD ParA nucleotide binding domain protein
PDGADOJB_00852 5.6e-161 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PDGADOJB_00853 3.1e-105 L Resolvase, N terminal domain
PDGADOJB_00854 2.3e-113 L hmm pf00665
PDGADOJB_00855 2.3e-181 1.17.4.1 F Ribonucleotide reductase, small chain
PDGADOJB_00856 2.4e-167 nrdF 1.17.4.1 F Ribonucleotide reductase, small chain
PDGADOJB_00857 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDGADOJB_00858 1.8e-80 nrdI F NrdI Flavodoxin like
PDGADOJB_00861 7.8e-123 L Transposase
PDGADOJB_00862 6.3e-51 L Transposase
PDGADOJB_00863 0.0 kup P Transport of potassium into the cell
PDGADOJB_00864 4.1e-254 fbp 3.1.3.11 G phosphatase activity
PDGADOJB_00865 8.9e-99 tnpR1 L Resolvase, N terminal domain
PDGADOJB_00866 6.2e-57 K helix_turn_helix multiple antibiotic resistance protein
PDGADOJB_00867 2.3e-99 IQ reductase
PDGADOJB_00868 1.1e-78 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PDGADOJB_00869 2.4e-121 metQ_4 P Belongs to the nlpA lipoprotein family
PDGADOJB_00870 7.1e-92 metI P ABC transporter permease
PDGADOJB_00871 8.8e-129 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PDGADOJB_00872 2.3e-47 yebR 1.8.4.14 T GAF domain-containing protein
PDGADOJB_00874 8.1e-42 L Transposase and inactivated derivatives, IS30 family
PDGADOJB_00875 8.2e-105 L Transposase and inactivated derivatives, IS30 family
PDGADOJB_00876 4.2e-86 M1-874 K Domain of unknown function (DUF1836)
PDGADOJB_00877 4.2e-150 S Uncharacterised protein, DegV family COG1307
PDGADOJB_00878 6.6e-93
PDGADOJB_00882 9.3e-278 bmr3 EGP Major facilitator Superfamily
PDGADOJB_00883 4.1e-212 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PDGADOJB_00884 1.6e-121
PDGADOJB_00885 9.3e-294 tagE1 2.4.1.52 GT4 M Glycosyl transferases group 1
PDGADOJB_00886 1.7e-168 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PDGADOJB_00887 1.7e-254 mmuP E amino acid
PDGADOJB_00888 7.6e-188 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
PDGADOJB_00889 5.2e-232 mntH P H( )-stimulated, divalent metal cation uptake system
PDGADOJB_00891 1.1e-155 T Calcineurin-like phosphoesterase superfamily domain
PDGADOJB_00892 2e-94 K Acetyltransferase (GNAT) domain
PDGADOJB_00893 2.6e-94
PDGADOJB_00894 1.8e-182 P secondary active sulfate transmembrane transporter activity
PDGADOJB_00895 1.4e-90 apt 2.4.2.22, 2.4.2.7 F Phosphoribosyl transferase domain
PDGADOJB_00901 5.1e-08
PDGADOJB_00907 1.3e-257 aspA 4.2.1.2, 4.3.1.1 E Fumarase C C-terminus
PDGADOJB_00908 1.2e-155 mleP3 S Membrane transport protein
PDGADOJB_00909 7.5e-110 S Membrane
PDGADOJB_00910 9.1e-188 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PDGADOJB_00911 1.1e-98 1.5.1.3 H RibD C-terminal domain
PDGADOJB_00912 4.2e-186 iunH 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PDGADOJB_00913 3.7e-91 2.7.7.65 T phosphorelay sensor kinase activity
PDGADOJB_00914 5.6e-121 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PDGADOJB_00915 5.2e-174 hrtB V ABC transporter permease
PDGADOJB_00916 6.6e-95 S Protein of unknown function (DUF1440)
PDGADOJB_00917 1.7e-227 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PDGADOJB_00918 6.4e-148 KT helix_turn_helix, mercury resistance
PDGADOJB_00919 1.6e-115 S Protein of unknown function (DUF554)
PDGADOJB_00920 1.1e-92 yueI S Protein of unknown function (DUF1694)
PDGADOJB_00921 2e-143 yvpB S Peptidase_C39 like family
PDGADOJB_00922 2.9e-150 M Glycosyl hydrolases family 25
PDGADOJB_00923 3.9e-111
PDGADOJB_00924 1.5e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PDGADOJB_00925 2.6e-83 hmpT S Pfam:DUF3816
PDGADOJB_00926 1e-63 K Winged helix DNA-binding domain
PDGADOJB_00927 1.6e-102 L Integrase
PDGADOJB_00928 0.0 clpE O Belongs to the ClpA ClpB family
PDGADOJB_00929 6.5e-30
PDGADOJB_00930 2.7e-39 ptsH G phosphocarrier protein HPR
PDGADOJB_00931 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PDGADOJB_00932 1.4e-223 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
PDGADOJB_00933 6.9e-200 cpoA GT4 M Glycosyltransferase, group 1 family protein
PDGADOJB_00934 1.3e-188 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PDGADOJB_00935 7.3e-228 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PDGADOJB_00936 6.5e-226 patA 2.6.1.1 E Aminotransferase
PDGADOJB_00937 1.1e-34 ykuJ S Protein of unknown function (DUF1797)
PDGADOJB_00938 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PDGADOJB_00939 2.6e-53 M Bacterial Ig-like domain (group 3)
PDGADOJB_00940 8e-18 L Transposase
PDGADOJB_00941 2.4e-22 L Transposase
PDGADOJB_00942 6.9e-40 L Transposase
PDGADOJB_00943 1.7e-51 K helix_turn_helix, arabinose operon control protein
PDGADOJB_00945 2e-07 D Mycoplasma protein of unknown function, DUF285
PDGADOJB_00946 4.3e-09 3.4.21.72 M Bacterial Ig-like domain (group 3)
PDGADOJB_00947 5.9e-17 K helix_turn_helix multiple antibiotic resistance protein
PDGADOJB_00948 1.8e-12 L Helix-turn-helix domain
PDGADOJB_00949 2.1e-08 L Helix-turn-helix domain
PDGADOJB_00952 6.9e-35 S Cell surface protein
PDGADOJB_00953 2.5e-152
PDGADOJB_00954 4e-19 K helix_turn_helix multiple antibiotic resistance protein
PDGADOJB_00955 1.5e-103 K Helix-turn-helix domain
PDGADOJB_00956 7.2e-212 EGP Major facilitator Superfamily
PDGADOJB_00957 8.5e-57 ybjQ S Belongs to the UPF0145 family
PDGADOJB_00958 1.5e-143 Q Methyltransferase
PDGADOJB_00959 1.6e-31
PDGADOJB_00961 4.5e-230 rodA D Cell cycle protein
PDGADOJB_00962 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
PDGADOJB_00963 2.3e-142 P ATPases associated with a variety of cellular activities
PDGADOJB_00964 2.1e-221 lytR5 K Cell envelope-related transcriptional attenuator domain
PDGADOJB_00965 2.1e-100 L Helix-turn-helix domain
PDGADOJB_00966 9.9e-177 csbB 2.4.1.83 GT2 M Glycosyltransferase like family 2
PDGADOJB_00967 1.3e-66
PDGADOJB_00968 1.1e-76
PDGADOJB_00969 3.5e-216 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PDGADOJB_00970 5.4e-86
PDGADOJB_00971 5.6e-115 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PDGADOJB_00972 2.9e-36 ynzC S UPF0291 protein
PDGADOJB_00973 4.3e-33 yneF S Uncharacterised protein family (UPF0154)
PDGADOJB_00974 6.4e-119 plsC 2.3.1.51 I Acyltransferase
PDGADOJB_00975 2.8e-137 yabB 2.1.1.223 L Methyltransferase small domain
PDGADOJB_00976 2e-49 yazA L GIY-YIG catalytic domain protein
PDGADOJB_00977 2.3e-187 ldhA 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDGADOJB_00978 4.7e-134 S Haloacid dehalogenase-like hydrolase
PDGADOJB_00979 1.9e-144 rpsB J Belongs to the universal ribosomal protein uS2 family
PDGADOJB_00980 1e-151 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PDGADOJB_00981 2.2e-128 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PDGADOJB_00982 2.5e-82 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PDGADOJB_00983 6.8e-147 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PDGADOJB_00984 8.4e-137 cdsA 2.7.7.41 I Belongs to the CDS family
PDGADOJB_00985 9.5e-231 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PDGADOJB_00986 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PDGADOJB_00987 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDGADOJB_00988 4.2e-83 rimP J Required for maturation of 30S ribosomal subunits
PDGADOJB_00989 3.3e-217 nusA K Participates in both transcription termination and antitermination
PDGADOJB_00990 9.5e-49 ylxR K Protein of unknown function (DUF448)
PDGADOJB_00991 1.1e-47 ylxQ J ribosomal protein
PDGADOJB_00992 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PDGADOJB_00993 4.6e-50 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PDGADOJB_00994 2.5e-264 ydiN 5.4.99.5 G Major Facilitator
PDGADOJB_00995 1e-215 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PDGADOJB_00996 1e-93
PDGADOJB_00997 5.3e-237 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PDGADOJB_00998 5.5e-195 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
PDGADOJB_00999 2e-86 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PDGADOJB_01000 1.2e-171 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PDGADOJB_01001 1.2e-188 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PDGADOJB_01002 7.3e-132 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
PDGADOJB_01003 2.4e-195 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PDGADOJB_01004 1.5e-80 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PDGADOJB_01005 0.0 dnaK O Heat shock 70 kDa protein
PDGADOJB_01006 1.2e-184 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PDGADOJB_01007 1.3e-197 pbpX2 V Beta-lactamase
PDGADOJB_01008 8.8e-19 dltX S D-Ala-teichoic acid biosynthesis protein
PDGADOJB_01009 7e-297 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDGADOJB_01010 8.7e-234 dltB M MBOAT, membrane-bound O-acyltransferase family
PDGADOJB_01011 2.4e-34 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDGADOJB_01012 6.1e-246 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PDGADOJB_01013 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PDGADOJB_01014 4e-127 3.6.4.12 L Belongs to the 'phage' integrase family
PDGADOJB_01017 1.4e-49
PDGADOJB_01018 1.4e-49
PDGADOJB_01019 4e-113 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PDGADOJB_01020 4.5e-177 prmA J Ribosomal protein L11 methyltransferase
PDGADOJB_01021 2.9e-134 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PDGADOJB_01022 9.6e-58
PDGADOJB_01023 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PDGADOJB_01024 8.5e-78 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PDGADOJB_01025 7.9e-114 3.1.3.18 J HAD-hyrolase-like
PDGADOJB_01026 6e-165 yniA G Fructosamine kinase
PDGADOJB_01027 1.9e-155 lytH 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
PDGADOJB_01028 8.3e-243 hisS 6.1.1.21 J histidyl-tRNA synthetase
PDGADOJB_01029 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PDGADOJB_01030 1.6e-99 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PDGADOJB_01031 1.7e-159 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PDGADOJB_01032 2.9e-223 tagB 2.7.8.14, 2.7.8.44, 2.7.8.47 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PDGADOJB_01033 1.9e-169 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PDGADOJB_01034 1.7e-128 C Enoyl-(Acyl carrier protein) reductase
PDGADOJB_01035 2.1e-151 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PDGADOJB_01036 9.7e-23 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PDGADOJB_01037 2.6e-71 yqeY S YqeY-like protein
PDGADOJB_01038 3.4e-180 phoH T phosphate starvation-inducible protein PhoH
PDGADOJB_01039 2.5e-83 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PDGADOJB_01040 4.5e-73 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
PDGADOJB_01041 1.5e-169 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PDGADOJB_01042 3.1e-147 recO L Involved in DNA repair and RecF pathway recombination
PDGADOJB_01043 6.8e-175 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PDGADOJB_01044 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PDGADOJB_01045 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PDGADOJB_01046 4.6e-197 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PDGADOJB_01047 9.5e-65 K helix_turn_helix gluconate operon transcriptional repressor
PDGADOJB_01048 4.8e-165 ytrB V ABC transporter, ATP-binding protein
PDGADOJB_01049 9.2e-203
PDGADOJB_01050 3.6e-199
PDGADOJB_01051 2.3e-128 S ABC-2 family transporter protein
PDGADOJB_01052 3.9e-162 V ABC transporter, ATP-binding protein
PDGADOJB_01053 3.8e-114 S Psort location CytoplasmicMembrane, score
PDGADOJB_01054 2.1e-73 K MarR family
PDGADOJB_01055 6e-82 K Acetyltransferase (GNAT) domain
PDGADOJB_01057 2.6e-158 yvfR V ABC transporter
PDGADOJB_01058 1.3e-134 yvfS V ABC-2 type transporter
PDGADOJB_01059 1.5e-203 desK 2.7.13.3 T Histidine kinase
PDGADOJB_01060 3.6e-103 desR K helix_turn_helix, Lux Regulon
PDGADOJB_01061 2.5e-269 nox C Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PDGADOJB_01062 2.5e-13 S Alpha beta hydrolase
PDGADOJB_01063 6.7e-173 C nadph quinone reductase
PDGADOJB_01064 1.9e-161 K Transcriptional regulator
PDGADOJB_01065 9.8e-79 S Uncharacterized protein conserved in bacteria (DUF2255)
PDGADOJB_01066 4.5e-112 GM NmrA-like family
PDGADOJB_01067 2.6e-160 S Alpha beta hydrolase
PDGADOJB_01068 2.5e-127 K Helix-turn-helix domain, rpiR family
PDGADOJB_01069 1.5e-80 maa 2.3.1.18, 2.3.1.79 S Maltose O-acetyltransferase
PDGADOJB_01070 1.5e-118 ppaX_1 3.1.3.18, 3.6.1.1 S haloacid dehalogenase-like hydrolase
PDGADOJB_01071 0.0 CP_1020 S Zinc finger, swim domain protein
PDGADOJB_01072 2e-112 GM epimerase
PDGADOJB_01073 4.1e-68 S Protein of unknown function (DUF1722)
PDGADOJB_01074 3.5e-70 yneH 1.20.4.1 P ArsC family
PDGADOJB_01075 1.7e-108 yjhB 3.6.1.13, 3.6.1.55 F NUDIX domain
PDGADOJB_01076 8e-137 K DeoR C terminal sensor domain
PDGADOJB_01077 4.7e-311 naoX P Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PDGADOJB_01078 3.7e-210 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PDGADOJB_01079 4.3e-77 K Transcriptional regulator
PDGADOJB_01080 1.3e-241 EGP Major facilitator Superfamily
PDGADOJB_01081 5.2e-245 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PDGADOJB_01082 4.9e-266 3.6.3.6 P Cation transporter/ATPase, N-terminus
PDGADOJB_01083 3.2e-130 3.6.3.6 P Cation transporter/ATPase, N-terminus
PDGADOJB_01084 1.1e-181 C Zinc-binding dehydrogenase
PDGADOJB_01085 1.2e-218 I transferase activity, transferring acyl groups other than amino-acyl groups
PDGADOJB_01086 2e-208
PDGADOJB_01087 2.1e-91 yetL K helix_turn_helix multiple antibiotic resistance protein
PDGADOJB_01088 1.9e-62 P Rhodanese Homology Domain
PDGADOJB_01089 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PDGADOJB_01090 3.1e-84 K helix_turn_helix multiple antibiotic resistance protein
PDGADOJB_01091 4.3e-164 drrA V ABC transporter
PDGADOJB_01092 1.2e-119 drrB U ABC-2 type transporter
PDGADOJB_01093 3.8e-221 M O-Antigen ligase
PDGADOJB_01094 1.6e-126 trmK 2.1.1.217 S SAM-dependent methyltransferase
PDGADOJB_01095 3.8e-198 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PDGADOJB_01096 1.4e-234 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PDGADOJB_01097 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PDGADOJB_01098 7.3e-29 S Protein of unknown function (DUF2929)
PDGADOJB_01099 0.0 dnaE 2.7.7.7 L DNA polymerase
PDGADOJB_01100 1.5e-180 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PDGADOJB_01101 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PDGADOJB_01102 1.5e-74 yeaL S Protein of unknown function (DUF441)
PDGADOJB_01103 2.9e-170 cvfB S S1 domain
PDGADOJB_01104 5.5e-164 xerD D recombinase XerD
PDGADOJB_01105 4.8e-69 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PDGADOJB_01106 5.7e-130 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PDGADOJB_01107 7.9e-103 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PDGADOJB_01108 1.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PDGADOJB_01109 1.1e-96 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PDGADOJB_01110 3.6e-196 ypbB 5.1.3.1 S Helix-turn-helix domain
PDGADOJB_01111 2.1e-271 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
PDGADOJB_01112 2e-19 M Lysin motif
PDGADOJB_01113 3.8e-117 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PDGADOJB_01114 1.8e-213 rpsA 1.17.7.4 J Ribosomal protein S1
PDGADOJB_01115 2.7e-249 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PDGADOJB_01116 1.1e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PDGADOJB_01117 3.3e-215 S Tetratricopeptide repeat protein
PDGADOJB_01118 7.4e-149 3.1.3.102, 3.1.3.104 S hydrolase
PDGADOJB_01119 2.1e-143 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PDGADOJB_01120 1.1e-228 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PDGADOJB_01121 9.6e-85
PDGADOJB_01122 0.0 yfmR S ABC transporter, ATP-binding protein
PDGADOJB_01123 1e-189 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PDGADOJB_01124 5.1e-92 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PDGADOJB_01125 5.1e-148 DegV S EDD domain protein, DegV family
PDGADOJB_01126 1.1e-151 ypmR E GDSL-like Lipase/Acylhydrolase
PDGADOJB_01127 3.1e-113 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
PDGADOJB_01128 3.4e-35 yozE S Belongs to the UPF0346 family
PDGADOJB_01129 2.3e-260 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
PDGADOJB_01130 4.3e-251 emrY EGP Major facilitator Superfamily
PDGADOJB_01131 4.4e-197 XK27_00915 C Luciferase-like monooxygenase
PDGADOJB_01132 1.2e-123 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
PDGADOJB_01133 3.4e-38 EGP Major facilitator Superfamily
PDGADOJB_01134 2.4e-116 EGP Major facilitator Superfamily
PDGADOJB_01135 1.3e-20 EGP Major facilitator Superfamily
PDGADOJB_01136 1.5e-172 cpsY K Transcriptional regulator, LysR family
PDGADOJB_01137 1.4e-228 XK27_05470 E Methionine synthase
PDGADOJB_01138 1.8e-161 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PDGADOJB_01139 9e-136 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDGADOJB_01140 3.3e-158 dprA LU DNA protecting protein DprA
PDGADOJB_01141 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PDGADOJB_01142 2.5e-250 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PDGADOJB_01143 3.4e-177 xerC D Belongs to the 'phage' integrase family. XerC subfamily
PDGADOJB_01144 6.7e-93 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PDGADOJB_01145 2.3e-257 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PDGADOJB_01146 2.2e-170 lacX 5.1.3.3 G Aldose 1-epimerase
PDGADOJB_01147 6.7e-105 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PDGADOJB_01148 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PDGADOJB_01149 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PDGADOJB_01150 1.2e-177 K Transcriptional regulator
PDGADOJB_01151 1.7e-168 ppaC 3.6.1.1 C inorganic pyrophosphatase
PDGADOJB_01152 4e-80 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PDGADOJB_01153 1e-95 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PDGADOJB_01154 4.2e-32 S YozE SAM-like fold
PDGADOJB_01155 4.6e-157 xerD L Phage integrase, N-terminal SAM-like domain
PDGADOJB_01156 1e-276 GT89 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PDGADOJB_01157 2.6e-244 M Glycosyl transferase family group 2
PDGADOJB_01158 2.1e-51
PDGADOJB_01159 1.2e-239 gshR1 1.8.1.7 C Glutathione reductase
PDGADOJB_01160 1.8e-72 mgrA K helix_turn_helix multiple antibiotic resistance protein
PDGADOJB_01161 8.5e-93 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
PDGADOJB_01162 0.0 tarL 2.7.8.14, 2.7.8.47 H CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PDGADOJB_01163 3.9e-196 tarK 2.7.8.14, 2.7.8.47 H CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PDGADOJB_01164 4.1e-192 tarJ 1.1.1.137, 1.1.1.303, 1.1.1.4, 1.1.1.405 E Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate
PDGADOJB_01165 3.7e-128 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the transfer of the cytidylyl group of CTP to D-ribitol 5-phosphate
PDGADOJB_01166 5.1e-227
PDGADOJB_01167 5.2e-279 lldP C L-lactate permease
PDGADOJB_01168 4.1e-59
PDGADOJB_01169 1e-114
PDGADOJB_01170 2.1e-244 cycA E Amino acid permease
PDGADOJB_01171 2.5e-134 XK27_00890 S Domain of unknown function (DUF368)
PDGADOJB_01172 5.2e-129 yejC S Protein of unknown function (DUF1003)
PDGADOJB_01173 6.2e-51 XK27_08430 S Staphylococcal protein of unknown function (DUF960)
PDGADOJB_01174 4.6e-12
PDGADOJB_01175 2.5e-209 pmrB EGP Major facilitator Superfamily
PDGADOJB_01176 1.4e-147 2.7.7.12 C Domain of unknown function (DUF4931)
PDGADOJB_01177 1.6e-48
PDGADOJB_01178 1.7e-09
PDGADOJB_01179 3.4e-132 S Protein of unknown function (DUF975)
PDGADOJB_01180 8.3e-78 yjcF 3.5.4.33, 4.4.1.8 K protein acetylation
PDGADOJB_01181 7e-161 degV S EDD domain protein, DegV family
PDGADOJB_01182 1.9e-66 K Transcriptional regulator
PDGADOJB_01183 0.0 FbpA K Fibronectin-binding protein
PDGADOJB_01184 3.5e-132 S ABC-2 family transporter protein
PDGADOJB_01185 2.7e-163 V ABC transporter, ATP-binding protein
PDGADOJB_01186 9.7e-91 3.6.1.55 F NUDIX domain
PDGADOJB_01187 2.9e-136 S Uncharacterized protein conserved in bacteria (DUF2087)
PDGADOJB_01188 1.3e-68 S LuxR family transcriptional regulator
PDGADOJB_01189 1.1e-129 cat 2.3.1.28 V Chloramphenicol acetyltransferase
PDGADOJB_01191 5.8e-70 frataxin S Domain of unknown function (DU1801)
PDGADOJB_01192 6.4e-113 pgm5 G Phosphoglycerate mutase family
PDGADOJB_01193 4e-288 S Bacterial membrane protein, YfhO
PDGADOJB_01194 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PDGADOJB_01195 1.8e-206 carA 6.3.5.5 F Belongs to the CarA family
PDGADOJB_01196 1.3e-88 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PDGADOJB_01197 1e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PDGADOJB_01198 4.4e-74 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PDGADOJB_01199 1.7e-293 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PDGADOJB_01200 3.3e-62 esbA S Family of unknown function (DUF5322)
PDGADOJB_01201 2.2e-66 rnhA 3.1.26.4 L Ribonuclease HI
PDGADOJB_01202 3.2e-211 yurR 1.4.5.1 E FAD dependent oxidoreductase
PDGADOJB_01203 2.9e-145 S hydrolase activity, acting on ester bonds
PDGADOJB_01204 1.1e-192
PDGADOJB_01205 8e-120 3.6.3.35 P ATPases associated with a variety of cellular activities
PDGADOJB_01206 7.3e-122
PDGADOJB_01207 1.7e-73 XK27_05710 K Acetyltransferase (GNAT) domain
PDGADOJB_01208 1.4e-181 mccF 3.4.17.13 V LD-carboxypeptidase
PDGADOJB_01209 6.9e-240 M hydrolase, family 25
PDGADOJB_01210 1.6e-77 K Acetyltransferase (GNAT) domain
PDGADOJB_01211 5.1e-209 mccF V LD-carboxypeptidase
PDGADOJB_01212 4e-40 M Glycosyltransferase, group 2 family protein
PDGADOJB_01213 4.3e-154 M Glycosyltransferase, group 2 family protein
PDGADOJB_01214 1.2e-73 S SnoaL-like domain
PDGADOJB_01215 2.8e-145 yjfP S COG1073 Hydrolases of the alpha beta superfamily
PDGADOJB_01216 6.8e-243 P Major Facilitator Superfamily
PDGADOJB_01217 1.2e-46 K helix_turn_helix, Arsenical Resistance Operon Repressor
PDGADOJB_01218 1.2e-222 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PDGADOJB_01220 3.2e-56 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PDGADOJB_01221 8.3e-110 ypsA S Belongs to the UPF0398 family
PDGADOJB_01222 7.6e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PDGADOJB_01223 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PDGADOJB_01224 7.4e-180 phnT 3.6.3.30 P ATPases associated with a variety of cellular activities
PDGADOJB_01225 4.9e-182 ftpB P Bacterial extracellular solute-binding protein
PDGADOJB_01226 5.4e-303 ftpA P Binding-protein-dependent transport system inner membrane component
PDGADOJB_01227 7.6e-83 uspA T Universal stress protein family
PDGADOJB_01228 2.7e-157 metQ_4 P Belongs to the nlpA lipoprotein family
PDGADOJB_01229 7.7e-99 metI P ABC transporter permease
PDGADOJB_01230 2.7e-186 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PDGADOJB_01232 1.3e-128 dnaD L Replication initiation and membrane attachment
PDGADOJB_01233 5.4e-258 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PDGADOJB_01234 1.1e-225 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
PDGADOJB_01235 2.1e-72 ypmB S protein conserved in bacteria
PDGADOJB_01236 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PDGADOJB_01237 4e-170 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
PDGADOJB_01238 7.4e-175 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PDGADOJB_01239 7.6e-205 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PDGADOJB_01240 9.6e-197 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PDGADOJB_01241 6.7e-195 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PDGADOJB_01242 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PDGADOJB_01243 2.5e-250 malT G Major Facilitator
PDGADOJB_01244 2.9e-90 S Domain of unknown function (DUF4767)
PDGADOJB_01245 1.4e-267 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
PDGADOJB_01246 1.2e-149 yitU 3.1.3.104 S hydrolase
PDGADOJB_01247 1.4e-265 yfnA E Amino Acid
PDGADOJB_01248 5.1e-259 gabT 2.6.1.19, 5.1.1.21 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PDGADOJB_01249 2.4e-43
PDGADOJB_01250 1.9e-49
PDGADOJB_01251 1.4e-136 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 U Ion channel
PDGADOJB_01252 1e-170 2.5.1.74 H UbiA prenyltransferase family
PDGADOJB_01253 5.7e-255 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PDGADOJB_01254 1.8e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PDGADOJB_01255 7.3e-280 pipD E Dipeptidase
PDGADOJB_01256 9.4e-40
PDGADOJB_01257 4.8e-29 S CsbD-like
PDGADOJB_01258 6.5e-41 S transglycosylase associated protein
PDGADOJB_01259 3.1e-14
PDGADOJB_01260 3.5e-36
PDGADOJB_01261 4.1e-164 yegS 2.7.1.107 I Diacylglycerol kinase catalytic domain
PDGADOJB_01262 8e-66 S Protein of unknown function (DUF805)
PDGADOJB_01263 6.3e-76 uspA T Belongs to the universal stress protein A family
PDGADOJB_01264 1.9e-67 tspO T TspO/MBR family
PDGADOJB_01265 7.9e-41
PDGADOJB_01266 5.8e-48 ycnE 3.1.1.29 S Antibiotic biosynthesis monooxygenase
PDGADOJB_01267 4.5e-114 1.14.99.53 AA10 S Lytic polysaccharide mono-oxygenase, cellulose-degrading
PDGADOJB_01268 2.1e-208 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PDGADOJB_01269 1.3e-28
PDGADOJB_01270 8.5e-54
PDGADOJB_01271 8.4e-14 K Bacterial regulatory proteins, tetR family
PDGADOJB_01272 5e-87 S Protein of unknown function with HXXEE motif
PDGADOJB_01273 1.2e-139 f42a O Band 7 protein
PDGADOJB_01274 3.3e-303 norB EGP Major Facilitator
PDGADOJB_01275 3.1e-93 K transcriptional regulator
PDGADOJB_01276 5.7e-36 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PDGADOJB_01277 6e-143 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PDGADOJB_01278 4.6e-88 ykhA 3.1.2.20 I Thioesterase superfamily
PDGADOJB_01279 9.4e-161 K LysR substrate binding domain
PDGADOJB_01280 1.7e-123 S Protein of unknown function (DUF554)
PDGADOJB_01281 4.9e-99 2.7.8.7 H Belongs to the P-Pant transferase superfamily
PDGADOJB_01282 9.9e-135 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
PDGADOJB_01283 3e-139 accA 2.1.3.15, 6.4.1.2 I alpha subunit
PDGADOJB_01284 1.6e-157 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PDGADOJB_01285 1.2e-260 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
PDGADOJB_01286 1e-69 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
PDGADOJB_01287 1.7e-73 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PDGADOJB_01288 1.6e-227 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PDGADOJB_01289 1.2e-126 IQ reductase
PDGADOJB_01290 2.9e-168 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
PDGADOJB_01291 1.3e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PDGADOJB_01292 1.7e-179 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PDGADOJB_01293 2.3e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PDGADOJB_01294 3.8e-179 yneE K Transcriptional regulator
PDGADOJB_01295 3e-145 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PDGADOJB_01296 8.5e-60 S Protein of unknown function (DUF1648)
PDGADOJB_01297 1e-198 adhB 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PDGADOJB_01298 6.5e-215 3.5.1.47 E Peptidase family M20/M25/M40
PDGADOJB_01299 1.5e-147 E glutamate:sodium symporter activity
PDGADOJB_01300 4.5e-67 ybbJ K Acetyltransferase (GNAT) family
PDGADOJB_01301 1e-176 1.6.5.5 C Zinc-binding dehydrogenase
PDGADOJB_01302 2e-97 entB 3.5.1.19 Q Isochorismatase family
PDGADOJB_01303 1.5e-141 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PDGADOJB_01304 6.6e-226 trpB 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PDGADOJB_01305 2.2e-108 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E Belongs to the TrpF family
PDGADOJB_01306 2.4e-123 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
PDGADOJB_01307 3.2e-165 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PDGADOJB_01308 1.5e-104 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH Peptidase C26
PDGADOJB_01309 6.8e-270 trpE 4.1.3.27 EH Anthranilate synthase component I, N terminal region
PDGADOJB_01311 1.1e-271 XK27_00765
PDGADOJB_01312 8.7e-139 ecsA_2 V AAA domain, putative AbiEii toxin, Type IV TA system
PDGADOJB_01313 1.4e-86
PDGADOJB_01314 9.9e-149 pelX UW LPXTG-motif cell wall anchor domain protein
PDGADOJB_01315 0.0 pelX UW LPXTG-motif cell wall anchor domain protein
PDGADOJB_01316 1.7e-51
PDGADOJB_01317 1.9e-59 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PDGADOJB_01318 3.4e-140 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PDGADOJB_01319 8.2e-96 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PDGADOJB_01320 2.6e-39 ylqC S Belongs to the UPF0109 family
PDGADOJB_01321 2.9e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PDGADOJB_01322 2.9e-220 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PDGADOJB_01323 2.6e-58 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PDGADOJB_01324 5.6e-169 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PDGADOJB_01325 0.0 smc D Required for chromosome condensation and partitioning
PDGADOJB_01326 5.7e-129 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PDGADOJB_01327 1.1e-34 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PDGADOJB_01328 2.3e-190 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PDGADOJB_01329 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PDGADOJB_01330 0.0 yloV S DAK2 domain fusion protein YloV
PDGADOJB_01331 1.8e-57 asp S Asp23 family, cell envelope-related function
PDGADOJB_01332 4.9e-27 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PDGADOJB_01333 1.3e-122 thiN 2.7.6.2 H thiamine pyrophosphokinase
PDGADOJB_01334 1.2e-117 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PDGADOJB_01335 3.2e-164 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PDGADOJB_01336 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
PDGADOJB_01337 1.7e-134 stp 3.1.3.16 T phosphatase
PDGADOJB_01338 7.1e-253 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PDGADOJB_01339 1.9e-175 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PDGADOJB_01340 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PDGADOJB_01341 4e-218 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PDGADOJB_01342 2.4e-30 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PDGADOJB_01343 3.3e-112 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
PDGADOJB_01344 1.7e-54
PDGADOJB_01345 4.9e-106 opuCD P Binding-protein-dependent transport system inner membrane component
PDGADOJB_01346 6e-174 opuCC M Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PDGADOJB_01347 1.2e-104 opuCB E ABC transporter permease
PDGADOJB_01348 5.7e-222 opuCA 3.6.3.32 E ABC transporter, ATP-binding protein
PDGADOJB_01349 4.4e-308 recN L May be involved in recombinational repair of damaged DNA
PDGADOJB_01350 7.4e-77 argR K Regulates arginine biosynthesis genes
PDGADOJB_01351 4e-150 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PDGADOJB_01352 8.3e-157 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PDGADOJB_01353 4.3e-33 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDGADOJB_01354 9.3e-245 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDGADOJB_01355 2.2e-151 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PDGADOJB_01356 5.2e-69 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PDGADOJB_01357 3.5e-74 yqhY S Asp23 family, cell envelope-related function
PDGADOJB_01358 2.2e-99 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PDGADOJB_01359 1.6e-194 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PDGADOJB_01360 5.4e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PDGADOJB_01361 3.2e-53 ysxB J Cysteine protease Prp
PDGADOJB_01362 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
PDGADOJB_01363 1.8e-89 K Transcriptional regulator
PDGADOJB_01364 5.4e-19
PDGADOJB_01367 1.7e-30
PDGADOJB_01368 1.8e-56
PDGADOJB_01369 6.2e-99 dut S Protein conserved in bacteria
PDGADOJB_01370 4e-181
PDGADOJB_01371 2.5e-161
PDGADOJB_01372 6.2e-265 glnA 6.3.1.2 E glutamine synthetase
PDGADOJB_01373 4.6e-64 glnR K Transcriptional regulator
PDGADOJB_01374 2.4e-175 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PDGADOJB_01375 5.8e-140 glpQ 3.1.4.46 C phosphodiesterase
PDGADOJB_01376 2e-22 WQ51_02665 S Protein of unknown function (DUF3042)
PDGADOJB_01377 4.4e-68 yqhL P Rhodanese-like protein
PDGADOJB_01378 2.2e-111 pepE 3.4.13.21 E Belongs to the peptidase S51 family
PDGADOJB_01379 5.7e-180 glk 2.7.1.2 G Glucokinase
PDGADOJB_01380 1.4e-33 yqgQ S Bacterial protein of unknown function (DUF910)
PDGADOJB_01381 1e-114 gluP 3.4.21.105 S Peptidase, S54 family
PDGADOJB_01382 2.8e-102 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PDGADOJB_01383 1.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PDGADOJB_01384 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
PDGADOJB_01385 0.0 S membrane
PDGADOJB_01386 1.5e-54 yneR S Belongs to the HesB IscA family
PDGADOJB_01387 4e-75 XK27_02470 K LytTr DNA-binding domain
PDGADOJB_01388 2.3e-96 liaI S membrane
PDGADOJB_01389 6.8e-81 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDGADOJB_01390 2.6e-112 udk 2.7.1.48 F Cytidine monophosphokinase
PDGADOJB_01391 6.6e-186 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PDGADOJB_01392 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDGADOJB_01393 4.9e-201 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PDGADOJB_01394 1.1e-62 yodB K Transcriptional regulator, HxlR family
PDGADOJB_01395 1.3e-93 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
PDGADOJB_01396 1e-139 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDGADOJB_01397 6.4e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PDGADOJB_01398 1e-162 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PDGADOJB_01399 1.9e-93 S SdpI/YhfL protein family
PDGADOJB_01400 1.3e-226 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PDGADOJB_01401 0.0 sbcC L Putative exonuclease SbcCD, C subunit
PDGADOJB_01402 5.8e-172 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PDGADOJB_01403 1.2e-305 arlS 2.7.13.3 T Histidine kinase
PDGADOJB_01404 4.3e-121 K response regulator
PDGADOJB_01405 4.2e-245 rarA L recombination factor protein RarA
PDGADOJB_01406 1e-273 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PDGADOJB_01407 2.9e-171 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PDGADOJB_01408 2.2e-89 S Peptidase propeptide and YPEB domain
PDGADOJB_01409 1.6e-97 yceD S Uncharacterized ACR, COG1399
PDGADOJB_01410 9.8e-219 ylbM S Belongs to the UPF0348 family
PDGADOJB_01411 5.8e-140 yqeM Q Methyltransferase
PDGADOJB_01412 2.1e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PDGADOJB_01413 3.2e-115 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PDGADOJB_01414 1.4e-118 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PDGADOJB_01415 1.1e-50 yhbY J RNA-binding protein
PDGADOJB_01416 1.7e-215 yqeH S Ribosome biogenesis GTPase YqeH
PDGADOJB_01417 1.4e-98 yqeG S HAD phosphatase, family IIIA
PDGADOJB_01418 1.3e-79
PDGADOJB_01419 3.8e-251 pgaC GT2 M Glycosyl transferase
PDGADOJB_01420 7.5e-135 racD 5.1.1.13 G Belongs to the aspartate glutamate racemases family
PDGADOJB_01421 1e-62 hxlR K Transcriptional regulator, HxlR family
PDGADOJB_01422 3.8e-198 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PDGADOJB_01423 1.3e-240 yrvN L AAA C-terminal domain
PDGADOJB_01424 2.4e-55
PDGADOJB_01425 7.3e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PDGADOJB_01426 1.9e-26 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PDGADOJB_01427 1.8e-84 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PDGADOJB_01428 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PDGADOJB_01429 3.3e-172 dnaI L Primosomal protein DnaI
PDGADOJB_01430 1.1e-248 dnaB L replication initiation and membrane attachment
PDGADOJB_01431 4.6e-91 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PDGADOJB_01432 2.7e-103 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PDGADOJB_01433 8.5e-156 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PDGADOJB_01434 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PDGADOJB_01435 4.5e-121 ybhL S Belongs to the BI1 family
PDGADOJB_01436 3.1e-111 hipB K Helix-turn-helix
PDGADOJB_01437 5.5e-45 yitW S Iron-sulfur cluster assembly protein
PDGADOJB_01438 1.4e-272 sufB O assembly protein SufB
PDGADOJB_01439 7.1e-83 nifU C SUF system FeS assembly protein, NifU family
PDGADOJB_01440 1.2e-233 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PDGADOJB_01441 2.6e-244 sufD O FeS assembly protein SufD
PDGADOJB_01442 4.2e-144 sufC O FeS assembly ATPase SufC
PDGADOJB_01443 1.3e-34 feoA P FeoA domain
PDGADOJB_01444 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
PDGADOJB_01445 2.3e-20 S Virus attachment protein p12 family
PDGADOJB_01446 1.1e-253 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PDGADOJB_01447 0.0 sftA D Belongs to the FtsK SpoIIIE SftA family
PDGADOJB_01448 2e-112 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDGADOJB_01449 1.6e-54 ytzB S Peptidase propeptide and YPEB domain
PDGADOJB_01450 9e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PDGADOJB_01451 3.2e-152 ytmP 2.7.1.89 M Choline/ethanolamine kinase
PDGADOJB_01452 3.1e-223 ecsB U ABC transporter
PDGADOJB_01453 1.6e-134 ecsA V ABC transporter, ATP-binding protein
PDGADOJB_01454 9.9e-82 hit FG histidine triad
PDGADOJB_01455 2e-42
PDGADOJB_01456 3.3e-129 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PDGADOJB_01457 3.5e-78 S WxL domain surface cell wall-binding
PDGADOJB_01458 4e-103 S WxL domain surface cell wall-binding
PDGADOJB_01459 1.4e-192 S Fn3-like domain
PDGADOJB_01460 7.9e-61
PDGADOJB_01461 0.0
PDGADOJB_01462 9.4e-242 npr 1.11.1.1 C NADH oxidase
PDGADOJB_01463 3.3e-112 K Bacterial regulatory proteins, tetR family
PDGADOJB_01464 5.1e-116 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
PDGADOJB_01465 4.2e-106
PDGADOJB_01466 9.3e-106 GBS0088 S Nucleotidyltransferase
PDGADOJB_01467 4.7e-82 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PDGADOJB_01468 4.8e-224 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PDGADOJB_01469 1.8e-86 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
PDGADOJB_01470 3.7e-172 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PDGADOJB_01471 0.0 S membrane
PDGADOJB_01472 4.9e-19 S NUDIX domain
PDGADOJB_01473 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PDGADOJB_01474 6.1e-185 ykoT GT2 M Glycosyl transferase family 2
PDGADOJB_01475 1e-268 mutS L MutS domain V
PDGADOJB_01476 5.6e-124 mutS L ATPase domain of DNA mismatch repair MUTS family
PDGADOJB_01477 4.4e-136 mutS L ATPase domain of DNA mismatch repair MUTS family
PDGADOJB_01478 1e-200 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PDGADOJB_01479 0.0 3.6.3.6 P Cation transporter/ATPase, N-terminus
PDGADOJB_01480 1.5e-42 S COG NOG38524 non supervised orthologous group
PDGADOJB_01481 6.7e-215 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PDGADOJB_01482 2.4e-16 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PDGADOJB_01485 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PDGADOJB_01486 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PDGADOJB_01487 2.7e-154 ymdB S YmdB-like protein
PDGADOJB_01488 2.1e-216 rny S Endoribonuclease that initiates mRNA decay
PDGADOJB_01489 5.2e-188 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PDGADOJB_01490 7.2e-231 cinA 3.5.1.42 S Belongs to the CinA family
PDGADOJB_01491 3.7e-97 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PDGADOJB_01492 5.7e-110 ymfM S Helix-turn-helix domain
PDGADOJB_01493 7.1e-250 ymfH S Peptidase M16
PDGADOJB_01494 6.5e-232 ymfF S Peptidase M16 inactive domain protein
PDGADOJB_01495 3.8e-254 lysC 2.7.2.4 E Belongs to the aspartokinase family
PDGADOJB_01496 1.5e-155 aatB ET ABC transporter substrate-binding protein
PDGADOJB_01497 2.5e-115 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDGADOJB_01498 4.6e-109 glnP P ABC transporter permease
PDGADOJB_01499 1.2e-146 minD D Belongs to the ParA family
PDGADOJB_01500 4.1e-116 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PDGADOJB_01501 1.2e-88 mreD M rod shape-determining protein MreD
PDGADOJB_01502 2.6e-144 mreC M Involved in formation and maintenance of cell shape
PDGADOJB_01503 2.8e-161 mreB D cell shape determining protein MreB
PDGADOJB_01504 6.6e-116 radC L DNA repair protein
PDGADOJB_01505 1.4e-248 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PDGADOJB_01506 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PDGADOJB_01507 3e-89 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PDGADOJB_01508 2e-233 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
PDGADOJB_01509 1.9e-228 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PDGADOJB_01510 1.7e-218 iscS2 2.8.1.7 E Aminotransferase class V
PDGADOJB_01511 0.0 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PDGADOJB_01512 5e-81 ytsP 1.8.4.14 T GAF domain-containing protein
PDGADOJB_01513 3.1e-107 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PDGADOJB_01514 5.2e-113 yktB S Belongs to the UPF0637 family
PDGADOJB_01515 7.3e-80 yueI S Protein of unknown function (DUF1694)
PDGADOJB_01516 3.1e-110 S Protein of unknown function (DUF1648)
PDGADOJB_01517 1.7e-44 czrA K Helix-turn-helix domain
PDGADOJB_01518 5.7e-231 malL 3.2.1.10 GH13 G COG0366 Glycosidases
PDGADOJB_01519 9.2e-42 2.7.1.191 G PTS system fructose IIA component
PDGADOJB_01520 2.7e-104 G PTS system mannose fructose sorbose family IID component
PDGADOJB_01521 3.6e-103 G PTS system sorbose-specific iic component
PDGADOJB_01522 6e-66 2.7.1.191 G PTS system sorbose subfamily IIB component
PDGADOJB_01523 5.9e-95 cytR 5.1.1.1 K Periplasmic binding proteins and sugar binding domain of LacI family
PDGADOJB_01524 0.0 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
PDGADOJB_01525 8.9e-237 rarA L recombination factor protein RarA
PDGADOJB_01526 1.5e-38
PDGADOJB_01527 6.2e-82 usp6 T universal stress protein
PDGADOJB_01528 6.1e-205 bla2 3.5.2.6 V Beta-lactamase enzyme family
PDGADOJB_01529 3.3e-161 2.3.1.19 K Helix-turn-helix XRE-family like proteins
PDGADOJB_01530 7.1e-297 glpQ3 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
PDGADOJB_01531 5.4e-214 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PDGADOJB_01532 3.6e-188 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PDGADOJB_01533 1.6e-177 S Protein of unknown function (DUF2785)
PDGADOJB_01534 2.8e-168 hicD1 1.1.1.27 C Belongs to the LDH MDH superfamily
PDGADOJB_01535 2.2e-148 metQ M Belongs to the nlpA lipoprotein family
PDGADOJB_01536 1.4e-111 metI U ABC transporter permease
PDGADOJB_01537 4e-187 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PDGADOJB_01538 3.6e-48 gcsH2 E glycine cleavage
PDGADOJB_01539 9.3e-220 rodA D Belongs to the SEDS family
PDGADOJB_01540 3.3e-33 S Protein of unknown function (DUF2969)
PDGADOJB_01541 7.9e-44 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PDGADOJB_01542 2.7e-180 mbl D Cell shape determining protein MreB Mrl
PDGADOJB_01543 2.1e-102 J Acetyltransferase (GNAT) domain
PDGADOJB_01544 4.4e-247 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDGADOJB_01545 1.1e-50 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PDGADOJB_01546 2.1e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PDGADOJB_01547 2.3e-165 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PDGADOJB_01548 2.7e-280 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PDGADOJB_01549 1.8e-90 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDGADOJB_01550 6e-51 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PDGADOJB_01551 2.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDGADOJB_01552 6.5e-128 atpB C it plays a direct role in the translocation of protons across the membrane
PDGADOJB_01553 5e-232 pyrP F Permease
PDGADOJB_01554 4.7e-114 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PDGADOJB_01555 2.9e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PDGADOJB_01556 6.9e-192 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PDGADOJB_01557 2.3e-159 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PDGADOJB_01558 1.2e-197 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PDGADOJB_01559 9.3e-109 tdk 2.7.1.21 F thymidine kinase
PDGADOJB_01560 1.5e-263 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
PDGADOJB_01561 2.2e-136 cobQ S glutamine amidotransferase
PDGADOJB_01562 3.4e-196 manA 5.3.1.8 G mannose-6-phosphate isomerase
PDGADOJB_01563 1.4e-192 ampC V Beta-lactamase
PDGADOJB_01564 1.4e-29
PDGADOJB_01565 1e-203 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PDGADOJB_01566 1.9e-58
PDGADOJB_01567 1.7e-126
PDGADOJB_01568 0.0 yfiC V ABC transporter
PDGADOJB_01569 0.0 ycfI V ABC transporter, ATP-binding protein
PDGADOJB_01570 3.3e-65 S Protein of unknown function (DUF1093)
PDGADOJB_01571 3.8e-135 yxkH G Polysaccharide deacetylase
PDGADOJB_01573 1.1e-28 hol S Bacteriophage holin
PDGADOJB_01574 8e-48
PDGADOJB_01575 4.8e-173 M Glycosyl hydrolases family 25
PDGADOJB_01577 1.6e-71 S Protein of unknown function (DUF1617)
PDGADOJB_01578 0.0 sidC GT2,GT4 LM DNA recombination
PDGADOJB_01579 5.9e-61
PDGADOJB_01580 0.0 D NLP P60 protein
PDGADOJB_01581 3e-22
PDGADOJB_01582 6.3e-64
PDGADOJB_01583 6.9e-78 S Phage tail tube protein, TTP
PDGADOJB_01584 1.4e-54
PDGADOJB_01585 1.3e-88
PDGADOJB_01586 1.5e-50
PDGADOJB_01587 4.6e-52
PDGADOJB_01589 2e-175 S Phage major capsid protein E
PDGADOJB_01590 2.9e-49
PDGADOJB_01591 3.1e-15 S Domain of unknown function (DUF4355)
PDGADOJB_01593 2.4e-30
PDGADOJB_01594 2.2e-296 S Phage Mu protein F like protein
PDGADOJB_01595 1.8e-268 S Phage portal protein, SPP1 Gp6-like
PDGADOJB_01596 1.8e-239 ps334 S Terminase-like family
PDGADOJB_01597 1.5e-68 ps333 L Terminase small subunit
PDGADOJB_01598 7.1e-27 S Protein of unknown function (DUF2829)
PDGADOJB_01599 2.8e-44
PDGADOJB_01600 4.6e-16 V HNH nucleases
PDGADOJB_01603 1.8e-14
PDGADOJB_01604 7.8e-29
PDGADOJB_01605 7.5e-22 S YopX protein
PDGADOJB_01607 1.4e-14
PDGADOJB_01608 1.2e-64 rusA 3.1.22.4 L Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
PDGADOJB_01609 7.4e-65
PDGADOJB_01610 3.9e-64 ps308 K AntA/AntB antirepressor
PDGADOJB_01611 8.3e-50
PDGADOJB_01612 1.3e-144 3.1.3.16 L DnaD domain protein
PDGADOJB_01613 2.4e-134 pi112 3.6.4.12 L PDDEXK-like domain of unknown function (DUF3799)
PDGADOJB_01614 3.5e-155 recT L RecT family
PDGADOJB_01615 1.1e-70
PDGADOJB_01616 1.9e-14 S Domain of unknown function (DUF1508)
PDGADOJB_01617 1.6e-75
PDGADOJB_01618 2.9e-53
PDGADOJB_01622 1.5e-17 K Cro/C1-type HTH DNA-binding domain
PDGADOJB_01623 1.4e-07
PDGADOJB_01626 1.3e-37 K Helix-turn-helix
PDGADOJB_01627 4.5e-61 yvaO K Helix-turn-helix domain
PDGADOJB_01628 4.3e-76 E IrrE N-terminal-like domain
PDGADOJB_01629 5.8e-61
PDGADOJB_01631 3e-69 S Domain of Unknown Function with PDB structure (DUF3862)
PDGADOJB_01633 3.5e-12 S DNA/RNA non-specific endonuclease
PDGADOJB_01638 3.7e-27
PDGADOJB_01639 1.3e-215 int L Belongs to the 'phage' integrase family
PDGADOJB_01641 8.9e-30
PDGADOJB_01643 2e-38
PDGADOJB_01644 1.4e-43
PDGADOJB_01645 7.3e-83 K MarR family
PDGADOJB_01646 0.0 bztC D nuclear chromosome segregation
PDGADOJB_01647 7.7e-310 M MucBP domain
PDGADOJB_01648 2.7e-16
PDGADOJB_01649 7.2e-17
PDGADOJB_01650 5.2e-15
PDGADOJB_01651 4.2e-18
PDGADOJB_01652 1.6e-16
PDGADOJB_01653 1.6e-16
PDGADOJB_01654 1.6e-16
PDGADOJB_01655 1.9e-18
PDGADOJB_01656 1.6e-16
PDGADOJB_01657 0.0 msbA2 3.6.3.44 P ABC transporter transmembrane region
PDGADOJB_01658 6.6e-274 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
PDGADOJB_01659 0.0 macB3 V ABC transporter, ATP-binding protein
PDGADOJB_01660 6.8e-24
PDGADOJB_01661 1e-259 pgi 5.3.1.9 G Belongs to the GPI family
PDGADOJB_01662 9.7e-155 glcU U sugar transport
PDGADOJB_01663 3.2e-217 ywbD 2.1.1.191 J S-adenosylmethionine-dependent methyltransferase
PDGADOJB_01664 2.9e-287 yclK 2.7.13.3 T Histidine kinase
PDGADOJB_01665 1.6e-134 K response regulator
PDGADOJB_01666 3e-243 XK27_08635 S UPF0210 protein
PDGADOJB_01667 5.2e-38 gcvR T Belongs to the UPF0237 family
PDGADOJB_01668 1.5e-169 EG EamA-like transporter family
PDGADOJB_01670 7.7e-92 S ECF-type riboflavin transporter, S component
PDGADOJB_01671 8.6e-48
PDGADOJB_01672 2.2e-213 yceI EGP Major facilitator Superfamily
PDGADOJB_01673 6.1e-137 3.6.1.13, 3.6.1.55 F NUDIX domain
PDGADOJB_01674 3.8e-23
PDGADOJB_01676 5.5e-158 S Alpha/beta hydrolase of unknown function (DUF915)
PDGADOJB_01677 2.8e-173 ykfC 3.4.14.13 M NlpC/P60 family
PDGADOJB_01678 6.6e-81 K AsnC family
PDGADOJB_01679 2e-35
PDGADOJB_01680 5.1e-34
PDGADOJB_01681 3.9e-218 2.7.7.65 T diguanylate cyclase
PDGADOJB_01682 7.8e-296 S ABC transporter, ATP-binding protein
PDGADOJB_01683 2e-106 3.2.2.20 K acetyltransferase
PDGADOJB_01684 9.8e-82 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDGADOJB_01685 2.7e-39
PDGADOJB_01686 0.0 nagE 2.7.1.193, 2.7.1.199, 2.7.1.211 G phosphotransferase system, EIIB
PDGADOJB_01687 1.4e-189 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PDGADOJB_01688 1.3e-162 degV S Uncharacterised protein, DegV family COG1307
PDGADOJB_01689 5.6e-231 hom1 1.1.1.3 E Homoserine dehydrogenase
PDGADOJB_01690 5.8e-244 metY 2.5.1.49 E Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
PDGADOJB_01691 1.4e-164 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PDGADOJB_01692 1.4e-176 XK27_08835 S ABC transporter
PDGADOJB_01693 8.7e-154 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PDGADOJB_01694 5.8e-138 XK27_08845 S ABC transporter, ATP-binding protein
PDGADOJB_01695 2.5e-258 npr 1.11.1.1 C NADH oxidase
PDGADOJB_01696 1.4e-156 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
PDGADOJB_01697 1.4e-136 terC P membrane
PDGADOJB_01698 2.9e-83 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PDGADOJB_01699 1.2e-197 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PDGADOJB_01700 2.2e-51 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
PDGADOJB_01701 2.5e-58 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PDGADOJB_01702 7.6e-135 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PDGADOJB_01703 3.5e-129 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PDGADOJB_01704 1.8e-110 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PDGADOJB_01705 3e-107 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
PDGADOJB_01706 6.6e-232 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PDGADOJB_01707 4.3e-118 hisG 2.4.2.17 F Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PDGADOJB_01708 2.8e-213 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PDGADOJB_01709 1.3e-161 hisK 3.1.3.15 E Histidinol phosphate phosphatase, HisJ
PDGADOJB_01710 5.1e-215 ysaA V RDD family
PDGADOJB_01711 7.6e-166 corA P CorA-like Mg2+ transporter protein
PDGADOJB_01712 2.1e-55 S Domain of unknown function (DU1801)
PDGADOJB_01713 5.9e-91 rmeB K transcriptional regulator, MerR family
PDGADOJB_01714 6.5e-148 GM Belongs to the short-chain dehydrogenases reductases (SDR) family
PDGADOJB_01715 8.6e-98 J glyoxalase III activity
PDGADOJB_01716 8e-199 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PDGADOJB_01717 2.4e-186 pva3 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PDGADOJB_01718 3.7e-34
PDGADOJB_01719 3.2e-112 S Protein of unknown function (DUF1211)
PDGADOJB_01720 0.0 ydgH S MMPL family
PDGADOJB_01721 4.8e-288 M domain protein
PDGADOJB_01722 3.9e-75 yjcF S Acetyltransferase (GNAT) domain
PDGADOJB_01723 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PDGADOJB_01724 0.0 glpQ 3.1.4.46 C phosphodiesterase
PDGADOJB_01725 2.3e-184 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
PDGADOJB_01726 4.4e-143 S Alpha/beta hydrolase of unknown function (DUF915)
PDGADOJB_01727 2.8e-182 3.6.4.13 S domain, Protein
PDGADOJB_01728 3.6e-168 S Polyphosphate kinase 2 (PPK2)
PDGADOJB_01729 2.5e-98 drgA C Nitroreductase family
PDGADOJB_01730 3.1e-178 iunH2 3.2.2.1 F nucleoside hydrolase
PDGADOJB_01731 1.7e-146 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDGADOJB_01732 8.8e-123 S Sucrose-6F-phosphate phosphohydrolase
PDGADOJB_01733 2.3e-157 ccpB 5.1.1.1 K lacI family
PDGADOJB_01734 8.1e-117 K Helix-turn-helix domain, rpiR family
PDGADOJB_01735 1.3e-176 S Oxidoreductase family, NAD-binding Rossmann fold
PDGADOJB_01736 1.1e-197 yhhX 1.1.1.371 S Oxidoreductase family, C-terminal alpha/beta domain
PDGADOJB_01737 0.0 yjcE P Sodium proton antiporter
PDGADOJB_01738 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PDGADOJB_01739 3.7e-107 pncA Q Isochorismatase family
PDGADOJB_01740 2.7e-132
PDGADOJB_01741 5.1e-125 skfE V ABC transporter
PDGADOJB_01742 9.5e-65 yvoA_1 K Transcriptional regulator, GntR family
PDGADOJB_01743 1.2e-45 S Enterocin A Immunity
PDGADOJB_01744 7e-175 D Alpha beta
PDGADOJB_01745 0.0 pepF2 E Oligopeptidase F
PDGADOJB_01746 1.3e-72 K Transcriptional regulator
PDGADOJB_01747 2.3e-164
PDGADOJB_01748 5.4e-59
PDGADOJB_01749 2.6e-48
PDGADOJB_01750 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PDGADOJB_01751 1.2e-67
PDGADOJB_01752 5.4e-144 yjfP S Dienelactone hydrolase family
PDGADOJB_01753 2.3e-56 dsbJ 2.7.1.180, 5.3.4.1 CO Thioredoxin
PDGADOJB_01754 4.6e-205 metB 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PDGADOJB_01755 5.2e-47
PDGADOJB_01756 6.3e-45
PDGADOJB_01757 5e-82 yybC S Protein of unknown function (DUF2798)
PDGADOJB_01758 1.7e-73
PDGADOJB_01759 4e-60
PDGADOJB_01760 5.1e-195 lplA 6.3.1.20 H Lipoate-protein ligase
PDGADOJB_01761 0.0 acm2 3.2.1.17 NU Bacterial SH3 domain
PDGADOJB_01762 3e-72 G PTS system fructose IIA component
PDGADOJB_01763 3.2e-147 G PTS system mannose/fructose/sorbose family IID component
PDGADOJB_01764 4.7e-143 agaC G PTS system sorbose-specific iic component
PDGADOJB_01765 3.5e-85 agaB 2.7.1.191 K PTS system sorbose subfamily IIB component
PDGADOJB_01766 2e-129 K UTRA domain
PDGADOJB_01767 1.6e-79 uspA T universal stress protein
PDGADOJB_01768 1.9e-156 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PDGADOJB_01769 1.7e-48 K Cro/C1-type HTH DNA-binding domain
PDGADOJB_01770 3.3e-21 S Protein of unknown function (DUF2929)
PDGADOJB_01771 3e-223 lsgC M Glycosyl transferases group 1
PDGADOJB_01772 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PDGADOJB_01773 1.2e-160 S Putative esterase
PDGADOJB_01774 2.4e-130 gntR2 K Transcriptional regulator
PDGADOJB_01775 5.8e-91 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PDGADOJB_01776 5.2e-139
PDGADOJB_01777 1.4e-116 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PDGADOJB_01778 5.5e-138 rrp8 K LytTr DNA-binding domain
PDGADOJB_01779 4.2e-92 M1-874 K Domain of unknown function (DUF1836)
PDGADOJB_01780 1.7e-60
PDGADOJB_01781 4.1e-74 hspX O Belongs to the small heat shock protein (HSP20) family
PDGADOJB_01782 4.4e-58
PDGADOJB_01783 1.8e-240 yhdP S Transporter associated domain
PDGADOJB_01784 4.9e-87 nrdI F Belongs to the NrdI family
PDGADOJB_01785 2.6e-270 yjcE P Sodium proton antiporter
PDGADOJB_01786 4e-212 yttB EGP Major facilitator Superfamily
PDGADOJB_01787 8.6e-63 K helix_turn_helix, mercury resistance
PDGADOJB_01788 1.8e-173 C Zinc-binding dehydrogenase
PDGADOJB_01789 8.5e-57 S SdpI/YhfL protein family
PDGADOJB_01790 6.3e-295 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PDGADOJB_01791 1.6e-260 gabR K Bacterial regulatory proteins, gntR family
PDGADOJB_01792 5e-218 patA 2.6.1.1 E Aminotransferase
PDGADOJB_01793 7.8e-160 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PDGADOJB_01794 3e-18
PDGADOJB_01795 1.7e-126 S membrane transporter protein
PDGADOJB_01796 9.5e-161 mleR K LysR family
PDGADOJB_01797 5.6e-115 ylbE GM NAD(P)H-binding
PDGADOJB_01798 2.4e-95 wecD K Acetyltransferase (GNAT) family
PDGADOJB_01799 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PDGADOJB_01800 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PDGADOJB_01801 1.3e-171 ydcZ S Putative inner membrane exporter, YdcZ
PDGADOJB_01802 1.4e-113 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PDGADOJB_01803 3.9e-125 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PDGADOJB_01804 3.3e-169 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PDGADOJB_01805 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PDGADOJB_01806 1.2e-213 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PDGADOJB_01807 8.4e-243 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PDGADOJB_01808 1.1e-172 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PDGADOJB_01809 1.1e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PDGADOJB_01810 2.9e-298 pucR QT Purine catabolism regulatory protein-like family
PDGADOJB_01811 2.7e-236 pbuX F xanthine permease
PDGADOJB_01812 4e-221 pbuG S Permease family
PDGADOJB_01813 5.6e-161 GM NmrA-like family
PDGADOJB_01814 6.5e-156 T EAL domain
PDGADOJB_01815 4.4e-94
PDGADOJB_01816 9.2e-253 pgaC GT2 M Glycosyl transferase
PDGADOJB_01817 6.9e-124 2.1.1.14 E Methionine synthase
PDGADOJB_01818 6.4e-216 purD 6.3.4.13 F Belongs to the GARS family
PDGADOJB_01819 3.3e-286 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PDGADOJB_01820 9.9e-103 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PDGADOJB_01821 1.6e-188 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PDGADOJB_01822 7.4e-280 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PDGADOJB_01823 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDGADOJB_01824 2e-126 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDGADOJB_01825 3.6e-41 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDGADOJB_01826 2.9e-131 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PDGADOJB_01827 3.9e-212 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PDGADOJB_01828 1.7e-79 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PDGADOJB_01829 1.5e-223 XK27_09615 1.3.5.4 S reductase
PDGADOJB_01830 1.8e-110 XK27_09620 1.3.5.4 S NADPH-dependent FMN reductase
PDGADOJB_01831 4.9e-190 lplA2 6.3.1.20 H Bacterial lipoate protein ligase C-terminus
PDGADOJB_01832 1.4e-147 ptp3 3.1.3.48 T Tyrosine phosphatase family
PDGADOJB_01833 1.9e-118 cah 4.2.1.1 P Eukaryotic-type carbonic anhydrase
PDGADOJB_01834 7.5e-149 S Alpha/beta hydrolase of unknown function (DUF915)
PDGADOJB_01835 1.5e-180 ansA 3.5.1.1 EJ Asparaginase
PDGADOJB_01836 1.7e-139 cysA V ABC transporter, ATP-binding protein
PDGADOJB_01837 0.0 V FtsX-like permease family
PDGADOJB_01838 8e-42
PDGADOJB_01839 7.9e-61 gntR1 K Transcriptional regulator, GntR family
PDGADOJB_01840 6.9e-164 V ABC transporter, ATP-binding protein
PDGADOJB_01841 5.8e-149
PDGADOJB_01842 6.7e-81 uspA T universal stress protein
PDGADOJB_01843 1.2e-35
PDGADOJB_01844 4.2e-71 gtcA S Teichoic acid glycosylation protein
PDGADOJB_01845 1.1e-88
PDGADOJB_01846 9.4e-50
PDGADOJB_01848 1.7e-234 malY 4.4.1.8 E Aminotransferase, class I
PDGADOJB_01849 7.3e-86 2.7.7.1, 3.6.1.55 F belongs to the nudix hydrolase family
PDGADOJB_01850 5.4e-118
PDGADOJB_01851 1.5e-52
PDGADOJB_01853 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PDGADOJB_01854 3.6e-282 thrC 4.2.3.1 E Threonine synthase
PDGADOJB_01855 4.5e-146 XK27_02985 S Sucrose-6F-phosphate phosphohydrolase
PDGADOJB_01856 1.5e-11 mcbG S Pentapeptide repeats (8 copies)
PDGADOJB_01857 1.7e-111 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PDGADOJB_01858 1.7e-102 3.6.1.13 L Belongs to the Nudix hydrolase family
PDGADOJB_01859 7.8e-69 FG Scavenger mRNA decapping enzyme C-term binding
PDGADOJB_01860 7.5e-135 IQ Enoyl-(Acyl carrier protein) reductase
PDGADOJB_01861 1.8e-36 XK27_01315 S Protein of unknown function (DUF2829)
PDGADOJB_01862 1.9e-211 S Bacterial protein of unknown function (DUF871)
PDGADOJB_01863 2.1e-232 S Sterol carrier protein domain
PDGADOJB_01864 3.6e-88 niaR S 3H domain
PDGADOJB_01865 8.6e-265 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDGADOJB_01866 1.3e-117 K Transcriptional regulator
PDGADOJB_01867 3.2e-154 V ABC transporter
PDGADOJB_01868 8.2e-134 V AAA domain, putative AbiEii toxin, Type IV TA system
PDGADOJB_01869 1.1e-245 dsdA 4.3.1.18 E Belongs to the serine threonine dehydratase family. DsdA subfamily
PDGADOJB_01870 1.8e-294 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDGADOJB_01871 3.3e-296 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDGADOJB_01872 5.1e-54 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
PDGADOJB_01873 2.3e-48 pts20B 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PDGADOJB_01874 1.8e-130 gntR K UTRA
PDGADOJB_01875 6.8e-141 epsV 2.7.8.12 S glycosyl transferase family 2
PDGADOJB_01876 6.5e-122 pgm7 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PDGADOJB_01877 1.8e-81
PDGADOJB_01878 9.8e-152 S hydrolase
PDGADOJB_01879 1.6e-180 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PDGADOJB_01880 8.3e-152 EG EamA-like transporter family
PDGADOJB_01881 1.3e-176 pdxB 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PDGADOJB_01882 1.2e-100 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
PDGADOJB_01883 1.5e-233
PDGADOJB_01884 1.1e-77 fld C Flavodoxin
PDGADOJB_01885 0.0 M Bacterial Ig-like domain (group 3)
PDGADOJB_01886 0.0 M Bacterial surface protein 26-residue PARCEL repeat (3 repeats)
PDGADOJB_01887 2.7e-32
PDGADOJB_01888 6.1e-129 aroD 1.1.1.25, 4.2.1.10 E Type I 3-dehydroquinase
PDGADOJB_01889 2.2e-268 ycaM E amino acid
PDGADOJB_01890 7.9e-79 K Winged helix DNA-binding domain
PDGADOJB_01891 3.3e-166 S Oxidoreductase, aldo keto reductase family protein
PDGADOJB_01892 2.7e-160 akr5f 1.1.1.346 S reductase
PDGADOJB_01893 4.6e-163 K Transcriptional regulator
PDGADOJB_01895 6.1e-109 ydiL S CAAX protease self-immunity
PDGADOJB_01896 1e-31 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PDGADOJB_01897 8.5e-293 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PDGADOJB_01898 0.0 ydaO E amino acid
PDGADOJB_01899 2.7e-181 tagO 2.7.8.33, 2.7.8.35 M transferase
PDGADOJB_01900 4.3e-145 pstS P Phosphate
PDGADOJB_01901 1.7e-114 yvyE 3.4.13.9 S YigZ family
PDGADOJB_01902 1.5e-258 comFA L Helicase C-terminal domain protein
PDGADOJB_01903 9.1e-124 comFC S Competence protein
PDGADOJB_01904 3.5e-100 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PDGADOJB_01905 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PDGADOJB_01906 3.2e-203 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PDGADOJB_01907 1.2e-216 minJ O Domain present in PSD-95, Dlg, and ZO-1/2.
PDGADOJB_01908 1.5e-132 K response regulator
PDGADOJB_01909 9.2e-251 phoR 2.7.13.3 T Histidine kinase
PDGADOJB_01910 1.1e-150 pstS P Phosphate
PDGADOJB_01911 6.8e-162 pstC P probably responsible for the translocation of the substrate across the membrane
PDGADOJB_01912 1.5e-155 pstA P Phosphate transport system permease protein PstA
PDGADOJB_01913 1.1e-147 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDGADOJB_01914 1e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDGADOJB_01915 8.3e-117 phoU P Plays a role in the regulation of phosphate uptake
PDGADOJB_01916 2e-49 pspC KT positive regulation of macromolecule biosynthetic process
PDGADOJB_01917 9.2e-54 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
PDGADOJB_01918 1.4e-176 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PDGADOJB_01919 1.9e-163 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PDGADOJB_01920 8.5e-182 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PDGADOJB_01921 2.1e-171 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PDGADOJB_01922 1.9e-124 yliE T Putative diguanylate phosphodiesterase
PDGADOJB_01923 6.7e-270 nox C NADH oxidase
PDGADOJB_01924 4.3e-163 G Belongs to the glycosyl hydrolase 8 (cellulase D) family
PDGADOJB_01925 3.6e-245
PDGADOJB_01926 2.5e-204 S Protein conserved in bacteria
PDGADOJB_01927 6.8e-218 ydaM M Glycosyl transferase family group 2
PDGADOJB_01928 0.0 ydaN S Bacterial cellulose synthase subunit
PDGADOJB_01929 1e-132 2.7.7.65 T diguanylate cyclase activity
PDGADOJB_01930 1.7e-176 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PDGADOJB_01931 2e-109 yviA S Protein of unknown function (DUF421)
PDGADOJB_01932 1.1e-61 S Protein of unknown function (DUF3290)
PDGADOJB_01933 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PDGADOJB_01934 3.3e-132 yliE T Putative diguanylate phosphodiesterase
PDGADOJB_01935 3.4e-258 nox S Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PDGADOJB_01936 3.3e-103 ddpX 3.4.13.22 E Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
PDGADOJB_01937 9.2e-212 norA EGP Major facilitator Superfamily
PDGADOJB_01938 1.2e-117 yfbR S HD containing hydrolase-like enzyme
PDGADOJB_01939 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PDGADOJB_01940 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PDGADOJB_01941 6.7e-89 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PDGADOJB_01942 1.8e-231 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PDGADOJB_01943 7.2e-264 argH 4.3.2.1 E argininosuccinate lyase
PDGADOJB_01944 9.3e-87 S Short repeat of unknown function (DUF308)
PDGADOJB_01945 3.2e-161 rapZ S Displays ATPase and GTPase activities
PDGADOJB_01946 2.9e-190 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PDGADOJB_01947 3.7e-168 whiA K May be required for sporulation
PDGADOJB_01948 2.6e-305 oppA E ABC transporter, substratebinding protein
PDGADOJB_01949 1.1e-175 1.1.1.26 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDGADOJB_01950 3e-102 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PDGADOJB_01952 4.2e-245 rpoN K Sigma-54 factor, core binding domain
PDGADOJB_01953 7.3e-189 cggR K Putative sugar-binding domain
PDGADOJB_01954 2.6e-191 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PDGADOJB_01955 8.1e-224 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PDGADOJB_01956 1.2e-137 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PDGADOJB_01957 1.6e-249 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PDGADOJB_01958 1.3e-133
PDGADOJB_01959 1.6e-293 clcA P chloride
PDGADOJB_01960 1.2e-30 secG U Preprotein translocase
PDGADOJB_01961 1.3e-139 est 3.1.1.1 S Serine aminopeptidase, S33
PDGADOJB_01962 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PDGADOJB_01963 9.3e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PDGADOJB_01964 0.0 3.4.21.72 M Bacterial Ig-like domain (group 3)
PDGADOJB_01965 9.6e-256 glnP P ABC transporter
PDGADOJB_01966 1.2e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDGADOJB_01967 4.6e-105 yxjI
PDGADOJB_01968 4.4e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
PDGADOJB_01969 6.3e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PDGADOJB_01970 1.4e-178 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PDGADOJB_01971 1.5e-80 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PDGADOJB_01972 8.1e-88 2.3.1.128, 2.3.1.178 J Acetyltransferase (GNAT) domain
PDGADOJB_01973 1.1e-100 dnaQ 2.7.7.7 L DNA polymerase III
PDGADOJB_01974 5.6e-154 xth 3.1.11.2 L exodeoxyribonuclease III
PDGADOJB_01975 2.1e-160 yceM 1.1.1.18, 1.1.1.369 S Oxidoreductase family, NAD-binding Rossmann fold
PDGADOJB_01976 6.2e-168 murB 1.3.1.98 M Cell wall formation
PDGADOJB_01977 0.0 yjcE P Sodium proton antiporter
PDGADOJB_01978 1.3e-90 K helix_turn_helix multiple antibiotic resistance protein
PDGADOJB_01979 2.5e-121 S Protein of unknown function (DUF1361)
PDGADOJB_01980 2.7e-149 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PDGADOJB_01981 1.6e-129 ybbR S YbbR-like protein
PDGADOJB_01982 1e-251 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PDGADOJB_01983 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PDGADOJB_01984 1.3e-122 yliE T EAL domain
PDGADOJB_01985 1.3e-145 3.1.3.23 S Sucrose-6F-phosphate phosphohydrolase
PDGADOJB_01986 3.1e-104 K Bacterial regulatory proteins, tetR family
PDGADOJB_01987 6e-207 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PDGADOJB_01988 1.5e-52
PDGADOJB_01989 6e-73
PDGADOJB_01990 2e-132 1.5.1.39 C nitroreductase
PDGADOJB_01991 7.5e-153 G Transmembrane secretion effector
PDGADOJB_01992 4.1e-297 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PDGADOJB_01993 2.7e-143
PDGADOJB_01995 1.9e-71 spxA 1.20.4.1 P ArsC family
PDGADOJB_01996 1.5e-33
PDGADOJB_01997 1.1e-89 V VanZ like family
PDGADOJB_01998 5.6e-240 EGP Major facilitator Superfamily
PDGADOJB_01999 3.2e-175 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PDGADOJB_02000 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PDGADOJB_02001 1.8e-289 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PDGADOJB_02002 1.9e-152 licD M LicD family
PDGADOJB_02003 1.3e-82 K Transcriptional regulator
PDGADOJB_02004 1.5e-19
PDGADOJB_02005 1.2e-225 pbuG S permease
PDGADOJB_02006 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PDGADOJB_02007 1.8e-153 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PDGADOJB_02008 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PDGADOJB_02009 5.4e-180 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
PDGADOJB_02010 2e-180 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PDGADOJB_02011 0.0 oatA I Acyltransferase
PDGADOJB_02012 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PDGADOJB_02013 5e-69 O OsmC-like protein
PDGADOJB_02014 7.9e-48
PDGADOJB_02015 8.2e-252 yfnA E Amino Acid
PDGADOJB_02016 2.5e-88
PDGADOJB_02017 1.9e-147 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PDGADOJB_02018 4.6e-73 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
PDGADOJB_02019 1.8e-19
PDGADOJB_02020 1.5e-103 gmk2 2.7.4.8 F Guanylate kinase
PDGADOJB_02021 1.3e-81 zur P Belongs to the Fur family
PDGADOJB_02022 7.1e-12 3.2.1.14 GH18
PDGADOJB_02023 4.9e-148
PDGADOJB_02024 8.8e-113 gph 3.1.3.18 S HAD hydrolase, family IA, variant
PDGADOJB_02025 3e-210 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
PDGADOJB_02026 5.6e-170 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDGADOJB_02027 3.6e-41
PDGADOJB_02029 9e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDGADOJB_02030 7.8e-149 glnH ET ABC transporter substrate-binding protein
PDGADOJB_02031 1.6e-109 gluC P ABC transporter permease
PDGADOJB_02032 4e-108 glnP P ABC transporter permease
PDGADOJB_02033 1e-84 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PDGADOJB_02034 2.1e-154 K CAT RNA binding domain
PDGADOJB_02035 7.9e-258 2.7.1.193, 2.7.1.211 G phosphotransferase system, EIIB
PDGADOJB_02036 3.2e-141 G YdjC-like protein
PDGADOJB_02037 8.3e-246 steT E amino acid
PDGADOJB_02038 5.7e-74 mgrA K helix_turn_helix multiple antibiotic resistance protein
PDGADOJB_02039 3.7e-149 XK27_00825 S Sulfite exporter TauE/SafE
PDGADOJB_02040 2e-71 K MarR family
PDGADOJB_02041 8.3e-210 EGP Major facilitator Superfamily
PDGADOJB_02042 3.8e-85 S membrane transporter protein
PDGADOJB_02043 7.1e-98 K Bacterial regulatory proteins, tetR family
PDGADOJB_02044 8.7e-232 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PDGADOJB_02045 2.9e-78 3.6.1.55 F NUDIX domain
PDGADOJB_02046 1.3e-48 sugE U Multidrug resistance protein
PDGADOJB_02047 1.2e-26
PDGADOJB_02048 2.1e-128 pgm3 G Phosphoglycerate mutase family
PDGADOJB_02049 4.7e-125 pgm3 G Phosphoglycerate mutase family
PDGADOJB_02050 0.0 yjbQ P TrkA C-terminal domain protein
PDGADOJB_02051 5.9e-177 yqkA 3.6.1.55 F Belongs to the Nudix hydrolase family
PDGADOJB_02052 4.7e-109 dedA S SNARE associated Golgi protein
PDGADOJB_02053 0.0 helD 3.6.4.12 L DNA helicase
PDGADOJB_02054 5e-165 fabK 1.3.1.9 S Nitronate monooxygenase
PDGADOJB_02055 2.5e-177 coaA 2.7.1.33 F Pantothenic acid kinase
PDGADOJB_02056 8.7e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PDGADOJB_02057 6.2e-50
PDGADOJB_02058 1.7e-63 K Helix-turn-helix XRE-family like proteins
PDGADOJB_02059 0.0 L AAA domain
PDGADOJB_02060 5.5e-116 XK27_07075 V CAAX protease self-immunity
PDGADOJB_02061 5.2e-156 S Cysteine-rich secretory protein family
PDGADOJB_02062 2.9e-48 K Cro/C1-type HTH DNA-binding domain
PDGADOJB_02064 1.5e-68 D nuclear chromosome segregation
PDGADOJB_02065 3.4e-66
PDGADOJB_02066 3.3e-152 S Domain of unknown function (DUF4767)
PDGADOJB_02067 1.9e-48
PDGADOJB_02068 5.7e-38 S MORN repeat
PDGADOJB_02069 0.0 XK27_09800 I Acyltransferase family
PDGADOJB_02070 7.1e-37 S Transglycosylase associated protein
PDGADOJB_02071 2.6e-84
PDGADOJB_02072 7.2e-23
PDGADOJB_02073 8.7e-72 asp S Asp23 family, cell envelope-related function
PDGADOJB_02074 5.3e-72 asp2 S Asp23 family, cell envelope-related function
PDGADOJB_02075 2.6e-146 Q Fumarylacetoacetate (FAA) hydrolase family
PDGADOJB_02076 2.7e-156 yjdB S Domain of unknown function (DUF4767)
PDGADOJB_02077 4.9e-46 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
PDGADOJB_02078 5.4e-101 G Glycogen debranching enzyme
PDGADOJB_02079 0.0 pepN 3.4.11.2 E aminopeptidase
PDGADOJB_02080 0.0 N Uncharacterized conserved protein (DUF2075)
PDGADOJB_02081 2.6e-44 S MazG-like family
PDGADOJB_02082 3e-90 XK27_09665 5.4.2.11 G Phosphoglycerate mutase family
PDGADOJB_02083 0.0 nagH 2.7.13.3, 3.2.1.4, 3.2.1.52, 3.2.1.78, 3.2.1.8 GH20,GH26,GH5,GH9 M MucBP domain
PDGADOJB_02085 3.5e-88 S AAA domain
PDGADOJB_02086 1.5e-138 K sequence-specific DNA binding
PDGADOJB_02087 3.5e-97 K Helix-turn-helix domain
PDGADOJB_02088 2.8e-171 K Transcriptional regulator
PDGADOJB_02089 0.0 1.3.5.4 C FMN_bind
PDGADOJB_02091 2.3e-81 rmaD K Transcriptional regulator
PDGADOJB_02092 4.2e-115 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PDGADOJB_02093 2.8e-254 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PDGADOJB_02094 9.9e-199 asnA 6.3.1.1 F aspartate--ammonia ligase
PDGADOJB_02095 6.7e-278 pipD E Dipeptidase
PDGADOJB_02096 1.7e-221 2.7.7.7, 3.6.4.12 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
PDGADOJB_02097 1e-41
PDGADOJB_02098 4.1e-32 L leucine-zipper of insertion element IS481
PDGADOJB_02099 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PDGADOJB_02100 2.9e-162 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PDGADOJB_02101 1.5e-50 K helix_turn_helix, Arsenical Resistance Operon Repressor
PDGADOJB_02102 4.3e-138 S NADPH-dependent FMN reductase
PDGADOJB_02103 6.6e-179
PDGADOJB_02104 4.3e-220 yibE S overlaps another CDS with the same product name
PDGADOJB_02105 1.3e-126 yibF S overlaps another CDS with the same product name
PDGADOJB_02106 7.5e-103 3.2.2.20 K FR47-like protein
PDGADOJB_02107 5e-122 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PDGADOJB_02108 5.6e-49
PDGADOJB_02109 9e-192 nlhH_1 I alpha/beta hydrolase fold
PDGADOJB_02110 9.7e-253 xylP2 G symporter
PDGADOJB_02111 5.2e-281 murE 6.3.2.10, 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PDGADOJB_02112 1.6e-219 dapG 1.1.1.3, 2.7.2.4 E Amino acid kinase family
PDGADOJB_02113 0.0 asnB 6.3.5.4 E Asparagine synthase
PDGADOJB_02114 1.6e-49 azlD S Branched-chain amino acid transport protein (AzlD)
PDGADOJB_02115 1.3e-120 azlC E branched-chain amino acid
PDGADOJB_02116 4.4e-35 yyaN K MerR HTH family regulatory protein
PDGADOJB_02117 3.8e-106
PDGADOJB_02119 9.4e-31
PDGADOJB_02120 1.4e-117 S Domain of unknown function (DUF4811)
PDGADOJB_02121 2e-269 lmrB EGP Major facilitator Superfamily
PDGADOJB_02122 1.7e-84 merR K MerR HTH family regulatory protein
PDGADOJB_02123 5.8e-58
PDGADOJB_02124 2e-120 sirR K iron dependent repressor
PDGADOJB_02125 6e-31 cspC K Cold shock protein
PDGADOJB_02126 1.5e-130 thrE S Putative threonine/serine exporter
PDGADOJB_02127 2.2e-76 S Threonine/Serine exporter, ThrE
PDGADOJB_02128 1.5e-189 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PDGADOJB_02129 2.3e-119 lssY 3.6.1.27 I phosphatase
PDGADOJB_02130 2e-154 I alpha/beta hydrolase fold
PDGADOJB_02131 2.8e-99 2.3.1.128 J Acetyltransferase (GNAT) domain
PDGADOJB_02132 4.2e-92 K Transcriptional regulator
PDGADOJB_02133 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
PDGADOJB_02134 1.5e-264 lysP E amino acid
PDGADOJB_02135 1.6e-113 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
PDGADOJB_02136 2.5e-115 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PDGADOJB_02137 4.1e-218 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PDGADOJB_02145 6.9e-78 ctsR K Belongs to the CtsR family
PDGADOJB_02146 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PDGADOJB_02147 1.3e-108 K Bacterial regulatory proteins, tetR family
PDGADOJB_02148 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDGADOJB_02149 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDGADOJB_02150 6.6e-114 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
PDGADOJB_02151 3.6e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PDGADOJB_02152 5.5e-83 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PDGADOJB_02153 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PDGADOJB_02154 2.6e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PDGADOJB_02155 4.4e-112 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PDGADOJB_02156 5.5e-107 rplD J Forms part of the polypeptide exit tunnel
PDGADOJB_02157 1.8e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PDGADOJB_02158 8.1e-146 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PDGADOJB_02159 8.2e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PDGADOJB_02160 2.8e-52 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PDGADOJB_02161 2.1e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PDGADOJB_02162 9.2e-77 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PDGADOJB_02163 1.4e-24 rpmC J Belongs to the universal ribosomal protein uL29 family
PDGADOJB_02164 2.5e-40 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PDGADOJB_02165 4.3e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PDGADOJB_02166 2.4e-50 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PDGADOJB_02167 3.2e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PDGADOJB_02168 1e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PDGADOJB_02169 3.5e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PDGADOJB_02170 3.3e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PDGADOJB_02171 6.8e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PDGADOJB_02172 2.2e-24 rpmD J Ribosomal protein L30
PDGADOJB_02173 6.3e-70 rplO J Binds to the 23S rRNA
PDGADOJB_02174 1.5e-236 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PDGADOJB_02175 2.1e-125 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PDGADOJB_02176 3.1e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PDGADOJB_02177 1.1e-59 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PDGADOJB_02178 3.4e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PDGADOJB_02179 5.7e-172 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDGADOJB_02180 2.1e-61 rplQ J Ribosomal protein L17
PDGADOJB_02181 1.4e-181 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PDGADOJB_02182 1.7e-94 gerCA 2.5.1.30 S Heptaprenyl diphosphate synthase component I
PDGADOJB_02183 3.2e-86 ynhH S NusG domain II
PDGADOJB_02184 0.0 ndh 1.6.99.3 C NADH dehydrogenase
PDGADOJB_02185 1.7e-141 cad S FMN_bind
PDGADOJB_02186 1.5e-208 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDGADOJB_02187 4e-153 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDGADOJB_02188 8.2e-165 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDGADOJB_02189 5.5e-144 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDGADOJB_02190 3.9e-150 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PDGADOJB_02191 1.3e-78 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PDGADOJB_02192 1.9e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
PDGADOJB_02193 3.4e-163 degV S Uncharacterised protein, DegV family COG1307
PDGADOJB_02194 7.4e-184 ywhK S Membrane
PDGADOJB_02195 1.1e-203 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
PDGADOJB_02196 0.0 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PDGADOJB_02197 5.7e-166 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PDGADOJB_02198 4e-184 aroF 2.5.1.54 E DAHP synthetase I family
PDGADOJB_02199 2e-197 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PDGADOJB_02200 8e-263 P Sodium:sulfate symporter transmembrane region
PDGADOJB_02201 1.6e-52 yitW S Iron-sulfur cluster assembly protein
PDGADOJB_02202 4.1e-115 ttdB 4.2.1.2, 4.2.1.32 C Catalyzes the reversible hydration of fumarate to (S)- malate
PDGADOJB_02203 8.9e-178 ttdA 4.2.1.32 C Fumarate hydratase (Fumerase)
PDGADOJB_02204 5.9e-199 K Helix-turn-helix domain
PDGADOJB_02205 3.6e-154 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PDGADOJB_02206 4.5e-132 mntB 3.6.3.35 P ABC transporter
PDGADOJB_02207 4.8e-141 mtsB U ABC 3 transport family
PDGADOJB_02208 1.2e-174 sitA P Belongs to the bacterial solute-binding protein 9 family
PDGADOJB_02209 3.1e-50
PDGADOJB_02210 4.6e-166 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PDGADOJB_02211 8.3e-260 citP P Sodium:sulfate symporter transmembrane region
PDGADOJB_02212 2.9e-179 citR K sugar-binding domain protein
PDGADOJB_02213 7.9e-208 mez_1 1.1.1.38 C Malic enzyme, NAD binding domain
PDGADOJB_02214 3.3e-189 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PDGADOJB_02215 9e-44 citD C Covalent carrier of the coenzyme of citrate lyase
PDGADOJB_02216 2.7e-163 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
PDGADOJB_02217 4.6e-288 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
PDGADOJB_02218 1.1e-178 L PFAM Integrase, catalytic core
PDGADOJB_02219 7e-26 K sequence-specific DNA binding
PDGADOJB_02221 1e-204 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
PDGADOJB_02222 1.8e-10 C Alcohol dehydrogenase GroES-like domain
PDGADOJB_02223 1.4e-56 C Alcohol dehydrogenase GroES-like domain
PDGADOJB_02224 7.2e-42 C Alcohol dehydrogenase GroES-like domain
PDGADOJB_02225 1.5e-42 K HxlR-like helix-turn-helix
PDGADOJB_02226 2.7e-108 ydeA S intracellular protease amidase
PDGADOJB_02227 6.5e-44 S Protein of unknown function (DUF3781)
PDGADOJB_02228 2.3e-208 S Membrane
PDGADOJB_02229 0.0 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDGADOJB_02230 1.4e-47 ulaB 2.7.1.194, 2.7.1.200 G protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
PDGADOJB_02231 5.8e-234 ulaA 2.7.1.194 S PTS system sugar-specific permease component
PDGADOJB_02232 0.0 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PDGADOJB_02233 1.1e-65 S Protein of unknown function (DUF1093)
PDGADOJB_02234 0.0 bglF 2.7.1.193, 2.7.1.211 G phosphotransferase system
PDGADOJB_02235 3.8e-292 arbB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDGADOJB_02236 3.1e-125 licT2 K CAT RNA binding domain
PDGADOJB_02238 1.9e-30
PDGADOJB_02239 1.7e-84 dps P Belongs to the Dps family
PDGADOJB_02240 0.0 3.2.1.4, 3.2.1.78, 3.2.1.8 GH26,GH5,GH9 S MucBP domain
PDGADOJB_02241 1.7e-284 1.3.5.4 C FAD binding domain
PDGADOJB_02242 7.9e-163 K LysR substrate binding domain
PDGADOJB_02243 1.5e-152 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
PDGADOJB_02244 3.5e-291 yjcE P Sodium proton antiporter
PDGADOJB_02245 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PDGADOJB_02246 2.1e-117 K Bacterial regulatory proteins, tetR family
PDGADOJB_02247 5.4e-189 NU Mycoplasma protein of unknown function, DUF285
PDGADOJB_02248 4.3e-90 S WxL domain surface cell wall-binding
PDGADOJB_02249 8.6e-177 S Bacterial protein of unknown function (DUF916)
PDGADOJB_02250 0.0 pelX UW LPXTG-motif cell wall anchor domain protein
PDGADOJB_02251 1.6e-64 K helix_turn_helix, mercury resistance
PDGADOJB_02252 3.4e-152 IQ Enoyl-(Acyl carrier protein) reductase
PDGADOJB_02253 4.3e-69 maa S transferase hexapeptide repeat
PDGADOJB_02254 2.5e-130 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PDGADOJB_02255 8.3e-165 GM NmrA-like family
PDGADOJB_02256 5.4e-92 K Bacterial regulatory proteins, tetR family
PDGADOJB_02257 3.5e-172 fhuG U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PDGADOJB_02258 1e-137 sirB U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PDGADOJB_02259 3e-26 sirB U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PDGADOJB_02260 1.1e-144 fhuC 3.6.3.34 HP ABC transporter
PDGADOJB_02261 1.8e-170 fhuD P Periplasmic binding protein
PDGADOJB_02262 4.3e-109 K Bacterial regulatory proteins, tetR family
PDGADOJB_02263 2.3e-252 yfjF U Sugar (and other) transporter
PDGADOJB_02264 1.5e-180 S Aldo keto reductase
PDGADOJB_02265 4.5e-100 S Protein of unknown function (DUF1211)
PDGADOJB_02266 1.2e-191 1.1.1.219 GM Male sterility protein
PDGADOJB_02267 3.2e-98 K Bacterial regulatory proteins, tetR family
PDGADOJB_02268 9.8e-132 ydfG S KR domain
PDGADOJB_02269 3.7e-63 hxlR K HxlR-like helix-turn-helix
PDGADOJB_02270 1e-47 S Domain of unknown function (DUF1905)
PDGADOJB_02271 0.0 M Glycosyl hydrolases family 25
PDGADOJB_02272 9.1e-267 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
PDGADOJB_02273 2.2e-168 GM NmrA-like family
PDGADOJB_02274 7.9e-100 fadR K Bacterial regulatory proteins, tetR family
PDGADOJB_02275 3e-205 2.7.13.3 T GHKL domain
PDGADOJB_02276 5.7e-135 K LytTr DNA-binding domain
PDGADOJB_02277 0.0 asnB 6.3.5.4 E Asparagine synthase
PDGADOJB_02278 1.4e-94 M ErfK YbiS YcfS YnhG
PDGADOJB_02279 4.9e-213 ytbD EGP Major facilitator Superfamily
PDGADOJB_02280 2e-61 K Transcriptional regulator, HxlR family
PDGADOJB_02281 3.3e-121 M1-1017
PDGADOJB_02282 1.2e-57 K Transcriptional regulator PadR-like family
PDGADOJB_02283 3e-116 S Haloacid dehalogenase-like hydrolase
PDGADOJB_02284 2.3e-116
PDGADOJB_02285 6.4e-216 NU Mycoplasma protein of unknown function, DUF285
PDGADOJB_02286 1.1e-62
PDGADOJB_02287 7.5e-101 S WxL domain surface cell wall-binding
PDGADOJB_02288 6.2e-188 S Cell surface protein
PDGADOJB_02289 1.8e-113 S GyrI-like small molecule binding domain
PDGADOJB_02290 3.8e-69 S Iron-sulphur cluster biosynthesis
PDGADOJB_02291 1.7e-179 1.6.5.5 C Alcohol dehydrogenase GroES-like domain
PDGADOJB_02292 1.7e-101 S WxL domain surface cell wall-binding
PDGADOJB_02293 1.5e-189 S Cell surface protein
PDGADOJB_02294 4.2e-74
PDGADOJB_02295 8.4e-263
PDGADOJB_02296 3.5e-228 hpk9 2.7.13.3 T GHKL domain
PDGADOJB_02297 2.9e-38 S TfoX C-terminal domain
PDGADOJB_02298 6e-140 K Helix-turn-helix domain
PDGADOJB_02299 0.0 M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PDGADOJB_02300 1.7e-53 M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PDGADOJB_02301 2.4e-65 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PDGADOJB_02302 1.7e-44 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PDGADOJB_02303 0.0 ctpA 3.6.3.54 P P-type ATPase
PDGADOJB_02304 6e-213 adhC 1.1.1.90 C Zn-dependent alcohol dehydrogenases, class III
PDGADOJB_02305 1.3e-223 dhaT 1.1.1.1, 1.1.1.202 C Dehydrogenase
PDGADOJB_02306 3.9e-66 lysM M LysM domain
PDGADOJB_02307 3.6e-266 yjeM E Amino Acid
PDGADOJB_02308 1.9e-144 K Helix-turn-helix XRE-family like proteins
PDGADOJB_02309 1.4e-69
PDGADOJB_02311 5e-162 IQ KR domain
PDGADOJB_02312 6.4e-229 amd 3.5.1.47 E Peptidase family M20/M25/M40
PDGADOJB_02313 3.5e-176 O protein import
PDGADOJB_02314 3.6e-310 XK27_09600 V ABC transporter, ATP-binding protein
PDGADOJB_02315 0.0 V ABC transporter
PDGADOJB_02316 8.6e-218 ykiI
PDGADOJB_02317 1.1e-116 GM NAD(P)H-binding
PDGADOJB_02318 1.9e-138 IQ reductase
PDGADOJB_02319 3.7e-60 I sulfurtransferase activity
PDGADOJB_02320 2.7e-78 yphH S Cupin domain
PDGADOJB_02321 4.7e-93 S Phosphatidylethanolamine-binding protein
PDGADOJB_02322 1.7e-116 GM NAD(P)H-binding
PDGADOJB_02323 4.3e-176 C C4-dicarboxylate transmembrane transporter activity
PDGADOJB_02324 1.4e-130 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PDGADOJB_02325 6e-73
PDGADOJB_02326 2e-166 K Bacterial regulatory helix-turn-helix protein, lysR family
PDGADOJB_02327 2e-283 dinB 2.7.7.7 L impB/mucB/samB family C-terminal domain
PDGADOJB_02328 1.2e-73 S Psort location Cytoplasmic, score
PDGADOJB_02329 3.3e-219 T diguanylate cyclase
PDGADOJB_02330 2.6e-120 tag 3.2.2.20 L Methyladenine glycosylase
PDGADOJB_02331 1.4e-92
PDGADOJB_02332 9.1e-164 psaA P Belongs to the bacterial solute-binding protein 9 family
PDGADOJB_02333 1.8e-54 nudA S ASCH
PDGADOJB_02334 6.2e-108 S SdpI/YhfL protein family
PDGADOJB_02335 4.3e-94 M Lysin motif
PDGADOJB_02336 2.3e-65 M LysM domain
PDGADOJB_02337 1e-75 K helix_turn_helix, mercury resistance
PDGADOJB_02338 2.8e-185 1.1.1.219 GM Male sterility protein
PDGADOJB_02339 8.3e-281 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDGADOJB_02340 3.5e-269 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDGADOJB_02341 7e-53 ptcB 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PDGADOJB_02342 6.8e-75 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PDGADOJB_02343 5.3e-150 dicA K Helix-turn-helix domain
PDGADOJB_02344 3.2e-55
PDGADOJB_02345 9.8e-160 T Calcineurin-like phosphoesterase superfamily domain
PDGADOJB_02346 7.4e-64
PDGADOJB_02347 0.0 P Concanavalin A-like lectin/glucanases superfamily
PDGADOJB_02348 0.0 yhcA V ABC transporter, ATP-binding protein
PDGADOJB_02349 1.2e-95 cadD P Cadmium resistance transporter
PDGADOJB_02350 1e-48 K Transcriptional regulator, ArsR family
PDGADOJB_02351 1.9e-116 S SNARE associated Golgi protein
PDGADOJB_02352 1.1e-46
PDGADOJB_02353 6.8e-72 T Belongs to the universal stress protein A family
PDGADOJB_02354 4.1e-284 mntH P H( )-stimulated, divalent metal cation uptake system
PDGADOJB_02355 1.6e-122 K Helix-turn-helix XRE-family like proteins
PDGADOJB_02356 2.8e-82 gtrA S GtrA-like protein
PDGADOJB_02357 3.5e-114 zmp3 O Zinc-dependent metalloprotease
PDGADOJB_02358 7e-33
PDGADOJB_02360 5.4e-212 livJ E Receptor family ligand binding region
PDGADOJB_02361 6.5e-154 livH U Branched-chain amino acid transport system / permease component
PDGADOJB_02362 5.3e-141 livM E Branched-chain amino acid transport system / permease component
PDGADOJB_02363 1.8e-139 livG E Branched-chain amino acid ATP-binding cassette transporter
PDGADOJB_02364 3.3e-124 livF E ABC transporter
PDGADOJB_02365 8.5e-39 acuB S Domain in cystathionine beta-synthase and other proteins.
PDGADOJB_02366 7.6e-55 acuB S Domain in cystathionine beta-synthase and other proteins.
PDGADOJB_02367 1e-91 S WxL domain surface cell wall-binding
PDGADOJB_02368 3.6e-188 S Cell surface protein
PDGADOJB_02369 8.6e-63
PDGADOJB_02370 1e-260
PDGADOJB_02371 3.5e-169 XK27_00670 S ABC transporter
PDGADOJB_02372 7.6e-151 WQ51_06230 U Belongs to the binding-protein-dependent transport system permease family
PDGADOJB_02373 8.1e-109 cmpC S ATPases associated with a variety of cellular activities
PDGADOJB_02374 0.0 nagE 2.7.1.193, 2.7.1.199, 2.7.1.211 G phosphotransferase system, EIIB
PDGADOJB_02375 1.3e-119 drgA C Nitroreductase family
PDGADOJB_02376 1.1e-95 rmaB K Transcriptional regulator, MarR family
PDGADOJB_02377 0.0 lmrA 3.6.3.44 V ABC transporter
PDGADOJB_02378 2.9e-162 ypbG 2.7.1.2 GK ROK family
PDGADOJB_02379 1.4e-47 3.6.4.12 K HxlR-like helix-turn-helix
PDGADOJB_02380 3.2e-115 K Transcriptional regulator C-terminal region
PDGADOJB_02381 5.2e-178 4.1.1.52 S Amidohydrolase
PDGADOJB_02382 4.4e-129 E lipolytic protein G-D-S-L family
PDGADOJB_02383 1.8e-159 yicL EG EamA-like transporter family
PDGADOJB_02384 3e-225 sdrF M Collagen binding domain
PDGADOJB_02385 9.7e-269 I acetylesterase activity
PDGADOJB_02386 5.2e-177 S Phosphotransferase system, EIIC
PDGADOJB_02387 3.7e-134 aroD S Alpha/beta hydrolase family
PDGADOJB_02388 3.2e-37
PDGADOJB_02390 2.8e-134 S zinc-ribbon domain
PDGADOJB_02391 1.5e-264 S response to antibiotic
PDGADOJB_02392 4.8e-287 ubiD 4.1.1.98 H 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
PDGADOJB_02393 2.4e-243 P Sodium:sulfate symporter transmembrane region
PDGADOJB_02394 7.1e-164 K LysR substrate binding domain
PDGADOJB_02395 3.7e-70
PDGADOJB_02396 4.9e-22
PDGADOJB_02397 1.5e-191 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PDGADOJB_02398 6.8e-192 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDGADOJB_02399 4.5e-73 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PDGADOJB_02400 2e-80
PDGADOJB_02401 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PDGADOJB_02402 2.2e-104 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDGADOJB_02403 3.1e-127 yliE T EAL domain
PDGADOJB_02404 6.2e-218 2.7.7.65 T Diguanylate cyclase, GGDEF domain
PDGADOJB_02405 7.5e-89 pts21A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PDGADOJB_02406 5.6e-39 S Cytochrome B5
PDGADOJB_02407 1.9e-238
PDGADOJB_02408 2e-129 treR K UTRA
PDGADOJB_02409 2.2e-159 I alpha/beta hydrolase fold
PDGADOJB_02410 6.6e-256 npp S type I phosphodiesterase nucleotide pyrophosphatase
PDGADOJB_02411 1.7e-233 yxiO S Vacuole effluxer Atg22 like
PDGADOJB_02412 1.7e-173 ropB K Helix-turn-helix XRE-family like proteins
PDGADOJB_02413 3.7e-208 EGP Major facilitator Superfamily
PDGADOJB_02414 0.0 uvrA3 L excinuclease ABC
PDGADOJB_02415 0.0 S Predicted membrane protein (DUF2207)
PDGADOJB_02416 2.8e-148 3.1.3.102, 3.1.3.104 S hydrolase
PDGADOJB_02417 3.2e-308 ybiT S ABC transporter, ATP-binding protein
PDGADOJB_02418 1.3e-224 S CAAX protease self-immunity
PDGADOJB_02419 1e-132 2.7.1.89 M Phosphotransferase enzyme family
PDGADOJB_02420 5.7e-97 2.3.1.128 J Acetyltransferase (GNAT) domain
PDGADOJB_02421 3.2e-103 speG J Acetyltransferase (GNAT) domain
PDGADOJB_02422 4e-141 endA F DNA RNA non-specific endonuclease
PDGADOJB_02423 1.4e-53 K helix_turn_helix, Arsenical Resistance Operon Repressor
PDGADOJB_02424 8.1e-111 K Transcriptional regulator (TetR family)
PDGADOJB_02425 2.3e-190 yhgE V domain protein
PDGADOJB_02426 6.2e-09
PDGADOJB_02428 3e-246 EGP Major facilitator Superfamily
PDGADOJB_02429 0.0 mdlA V ABC transporter
PDGADOJB_02430 0.0 mdlB V ABC transporter
PDGADOJB_02432 5.7e-194 C Aldo/keto reductase family
PDGADOJB_02433 1.9e-102 M Protein of unknown function (DUF3737)
PDGADOJB_02434 1.1e-222 patB 4.4.1.8 E Aminotransferase, class I
PDGADOJB_02435 1e-102 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
PDGADOJB_02436 3.7e-62
PDGADOJB_02437 2.4e-127 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PDGADOJB_02438 5.8e-95 maa 2.3.1.18, 2.3.1.79 S Maltose O-acetyltransferase
PDGADOJB_02439 6.1e-76 T Belongs to the universal stress protein A family
PDGADOJB_02440 3.4e-35
PDGADOJB_02441 1.4e-92 Z012_04635 K Helix-turn-helix XRE-family like proteins
PDGADOJB_02442 1e-109 EGP Major facilitator Superfamily
PDGADOJB_02443 5.7e-83 GM NAD(P)H-binding
PDGADOJB_02444 2.1e-140 EGP Major Facilitator Superfamily
PDGADOJB_02445 5.2e-140 akr5f 1.1.1.346 S reductase
PDGADOJB_02446 2.2e-130 C Aldo keto reductase
PDGADOJB_02447 3.6e-113 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PDGADOJB_02448 2e-10 adhR K helix_turn_helix, mercury resistance
PDGADOJB_02449 1.8e-25 fldA C Flavodoxin
PDGADOJB_02451 2e-78 K Transcriptional regulator
PDGADOJB_02452 6.4e-109 akr5f 1.1.1.346 S reductase
PDGADOJB_02453 2.5e-86 GM NAD(P)H-binding
PDGADOJB_02454 8.1e-85 glcU U sugar transport
PDGADOJB_02455 3e-126 IQ reductase
PDGADOJB_02456 4.2e-76 darA C Flavodoxin
PDGADOJB_02457 3.3e-82 yiiE S Protein of unknown function (DUF1211)
PDGADOJB_02458 4.7e-141 aRA11 1.1.1.346 S reductase
PDGADOJB_02459 1.4e-150 IQ Enoyl-(Acyl carrier protein) reductase
PDGADOJB_02460 2.3e-195 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PDGADOJB_02461 1.2e-103 GM NAD(P)H-binding
PDGADOJB_02462 2.8e-157 K LysR substrate binding domain
PDGADOJB_02463 2.2e-63 S Domain of unknown function (DUF4440)
PDGADOJB_02464 2.6e-112 pgm8 G Histidine phosphatase superfamily (branch 1)
PDGADOJB_02465 8.2e-48
PDGADOJB_02466 7e-37
PDGADOJB_02467 1.9e-86 yvbK 3.1.3.25 K GNAT family
PDGADOJB_02468 1.4e-83
PDGADOJB_02469 4.3e-112 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PDGADOJB_02470 4.2e-115 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PDGADOJB_02471 1.4e-99 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PDGADOJB_02472 8e-117 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PDGADOJB_02474 1.4e-119 macB V ABC transporter, ATP-binding protein
PDGADOJB_02475 0.0 ylbB V ABC transporter permease
PDGADOJB_02476 1.7e-235 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PDGADOJB_02477 4.4e-79 K transcriptional regulator, MerR family
PDGADOJB_02478 3.2e-76 yphH S Cupin domain
PDGADOJB_02479 2.5e-55 yphJ 4.1.1.44 S Carboxymuconolactone decarboxylase family
PDGADOJB_02480 6.7e-128 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PDGADOJB_02481 1.8e-210 natB CP ABC-2 family transporter protein
PDGADOJB_02482 3.6e-168 natA S ABC transporter, ATP-binding protein
PDGADOJB_02483 1.8e-92 ogt 2.1.1.63 L Methyltransferase
PDGADOJB_02484 8.6e-52 lytE M LysM domain
PDGADOJB_02486 2e-267 tagE6 2.4.1.52 GT4 M Glycosyl transferases group 1
PDGADOJB_02487 5.8e-296 tagE5 2.4.1.52 GT4 M Poly(Glycerol-phosphate) alpha-glucosyltransferase
PDGADOJB_02488 3.7e-151 rlrG K Transcriptional regulator
PDGADOJB_02489 9.3e-173 S Conserved hypothetical protein 698
PDGADOJB_02490 1.8e-101 rimL J Acetyltransferase (GNAT) domain
PDGADOJB_02491 1.3e-74 S Domain of unknown function (DUF4811)
PDGADOJB_02492 3.2e-270 lmrB EGP Major facilitator Superfamily
PDGADOJB_02493 3.1e-124 hadL 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PDGADOJB_02494 7.6e-190 ynfM EGP Major facilitator Superfamily
PDGADOJB_02495 1.1e-94 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PDGADOJB_02496 7.6e-42 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PDGADOJB_02497 2.1e-140 K DeoR C terminal sensor domain
PDGADOJB_02498 3.8e-179 rhaR K helix_turn_helix, arabinose operon control protein
PDGADOJB_02499 1.6e-244 iolF EGP Major facilitator Superfamily
PDGADOJB_02500 1.8e-286 rhaB 2.7.1.12, 2.7.1.16, 2.7.1.5, 5.3.1.14 F Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate
PDGADOJB_02501 1.4e-55 rhaM 5.1.3.32 G Involved in the anomeric conversion of L-rhamnose
PDGADOJB_02502 3.8e-256 rhaA 2.7.1.5, 5.3.1.14 G L-rhamnose isomerase (RhaA)
PDGADOJB_02503 4.6e-165 rhaD 4.1.2.17, 4.1.2.19, 5.1.3.4 H Catalyzes the reversible cleavage of L-rhamnulose-1- phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde
PDGADOJB_02504 1e-125 S Membrane
PDGADOJB_02505 9.3e-71 yueI S Protein of unknown function (DUF1694)
PDGADOJB_02506 0.0 spxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PDGADOJB_02507 8.7e-72 K Transcriptional regulator
PDGADOJB_02508 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PDGADOJB_02509 6.1e-202 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PDGADOJB_02511 0.0 clpL O C-terminal, D2-small domain, of ClpB protein
PDGADOJB_02512 7.7e-98 agrB KOT May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor
PDGADOJB_02513 5.7e-16
PDGADOJB_02514 3.2e-223 2.7.13.3 T GHKL domain
PDGADOJB_02515 5.7e-135 K LytTr DNA-binding domain
PDGADOJB_02516 4.9e-78 yneH 1.20.4.1 K ArsC family
PDGADOJB_02517 7.1e-291 katA 1.11.1.6 C Belongs to the catalase family
PDGADOJB_02518 9e-13 ytgB S Transglycosylase associated protein
PDGADOJB_02519 3.6e-11
PDGADOJB_02520 1.6e-89 folT 2.7.13.3 T ECF transporter, substrate-specific component
PDGADOJB_02521 4.2e-70 S Pyrimidine dimer DNA glycosylase
PDGADOJB_02522 1.3e-229 1.7.1.15 S Pyridine nucleotide-disulphide oxidoreductase
PDGADOJB_02523 3e-122 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PDGADOJB_02524 3.1e-206 araR K Transcriptional regulator
PDGADOJB_02525 1.6e-255 araP U Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PDGADOJB_02526 2.7e-307 araB 2.7.1.12, 2.7.1.16, 2.7.1.5 G carbohydrate kinase FGGY
PDGADOJB_02527 6.6e-136 araD 4.1.2.17, 4.1.2.19, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
PDGADOJB_02528 7.8e-266 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
PDGADOJB_02529 9.6e-103 maa 2.3.1.18, 2.3.1.79 S Maltose O-acetyltransferase
PDGADOJB_02530 2.6e-70 yueI S Protein of unknown function (DUF1694)
PDGADOJB_02531 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PDGADOJB_02532 5.2e-123 K DeoR C terminal sensor domain
PDGADOJB_02533 1.5e-80 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDGADOJB_02534 3.1e-44 2.7.1.194, 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
PDGADOJB_02535 1.1e-231 gatC G PTS system sugar-specific permease component
PDGADOJB_02536 3e-188 gutB 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
PDGADOJB_02537 3.5e-237 manR K PRD domain
PDGADOJB_02539 9.1e-75 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDGADOJB_02540 8.6e-48 fruA 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
PDGADOJB_02541 6.6e-172 G Phosphotransferase System
PDGADOJB_02542 4.1e-127 alsE 5.1.3.1 G Ribulose-phosphate 3 epimerase family
PDGADOJB_02543 7e-113 tal 2.2.1.2 F Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PDGADOJB_02544 0.0 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PDGADOJB_02545 3e-145 yxeH S hydrolase
PDGADOJB_02546 9.9e-188 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PDGADOJB_02548 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PDGADOJB_02549 6.1e-271 G Major Facilitator
PDGADOJB_02550 1.4e-173 K Transcriptional regulator, LacI family
PDGADOJB_02551 0.0 treP 2.4.1.64 GH65 G hydrolase, family 65, central catalytic
PDGADOJB_02552 3.8e-159 licT K CAT RNA binding domain
PDGADOJB_02553 0.0 bglP 2.7.1.193, 2.7.1.211 G phosphotransferase system
PDGADOJB_02554 9.4e-291 pbg10 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDGADOJB_02555 3.4e-293 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDGADOJB_02556 1.3e-154 licT K CAT RNA binding domain
PDGADOJB_02557 0.0 pts30BCA 2.7.1.193, 2.7.1.211 G phosphotransferase system
PDGADOJB_02558 3.5e-290 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDGADOJB_02559 2.4e-211 S Bacterial protein of unknown function (DUF871)
PDGADOJB_02560 2.2e-157 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
PDGADOJB_02561 8.8e-165 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PDGADOJB_02562 6.2e-249 pts29C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDGADOJB_02563 1.2e-134 K UTRA domain
PDGADOJB_02564 1.8e-155 estA S Putative esterase
PDGADOJB_02565 7.6e-64
PDGADOJB_02566 6.7e-210 ydiN G Major Facilitator Superfamily
PDGADOJB_02567 3.4e-163 K Transcriptional regulator, LysR family
PDGADOJB_02568 4.2e-169 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PDGADOJB_02569 1.2e-214 ydiM G Transporter
PDGADOJB_02570 1.9e-130 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PDGADOJB_02571 8.2e-179 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDGADOJB_02572 0.0 1.3.5.4 C FAD binding domain
PDGADOJB_02573 2.4e-65 S pyridoxamine 5-phosphate
PDGADOJB_02574 2.6e-194 C Aldo keto reductase family protein
PDGADOJB_02575 1.1e-173 galR K Transcriptional regulator
PDGADOJB_02576 4.1e-200 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PDGADOJB_02577 0.0 lacS G Transporter
PDGADOJB_02578 0.0 rafA 3.2.1.22 G alpha-galactosidase
PDGADOJB_02579 8.3e-187 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
PDGADOJB_02580 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PDGADOJB_02581 9.3e-225 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PDGADOJB_02582 3.1e-192 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PDGADOJB_02583 1.3e-284 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PDGADOJB_02584 2e-183 galR K Transcriptional regulator
PDGADOJB_02585 1.6e-76 K Helix-turn-helix XRE-family like proteins
PDGADOJB_02586 1.3e-110 fic D Fic/DOC family
PDGADOJB_02587 3.7e-182 rhaR K helix_turn_helix, arabinose operon control protein
PDGADOJB_02588 8.6e-232 EGP Major facilitator Superfamily
PDGADOJB_02589 3e-303 ram2 3.2.1.40 G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PDGADOJB_02590 1.6e-230 mdtH P Sugar (and other) transporter
PDGADOJB_02591 0.0 3.2.1.40 G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PDGADOJB_02592 1.6e-188 lacR K Transcriptional regulator
PDGADOJB_02593 0.0 lacA 3.2.1.23 G -beta-galactosidase
PDGADOJB_02594 0.0 lacS G Transporter
PDGADOJB_02595 6.9e-251 brnQ U Component of the transport system for branched-chain amino acids
PDGADOJB_02596 0.0 ubiB S ABC1 family
PDGADOJB_02597 1.8e-108 aqpZ U Belongs to the MIP aquaporin (TC 1.A.8) family
PDGADOJB_02598 2.4e-220 3.1.3.1 S associated with various cellular activities
PDGADOJB_02599 1.1e-248 S Putative metallopeptidase domain
PDGADOJB_02600 1.5e-49
PDGADOJB_02601 5.4e-104 K Bacterial regulatory proteins, tetR family
PDGADOJB_02602 4.6e-45
PDGADOJB_02603 2.3e-99 S WxL domain surface cell wall-binding
PDGADOJB_02604 1.7e-117 S WxL domain surface cell wall-binding
PDGADOJB_02605 6.1e-164 S Cell surface protein
PDGADOJB_02606 0.0 XK27_00720 S Leucine-rich repeat (LRR) protein
PDGADOJB_02607 9.3e-261 nox C NADH oxidase
PDGADOJB_02608 1.9e-83 yoaA 2.3.1.128 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PDGADOJB_02609 0.0 pepO 3.4.24.71 O Peptidase family M13
PDGADOJB_02610 1.1e-116 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
PDGADOJB_02611 1.6e-32 copZ P Heavy-metal-associated domain
PDGADOJB_02612 6.6e-96 dps P Belongs to the Dps family
PDGADOJB_02613 1.6e-18
PDGADOJB_02614 2.1e-39 yrkD S Metal-sensitive transcriptional repressor
PDGADOJB_02615 1.5e-55 txlA O Thioredoxin-like domain
PDGADOJB_02616 6.3e-142 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PDGADOJB_02617 0.0 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
PDGADOJB_02618 5.6e-183 celE 3.2.1.4 GH5,GH9 E GDSL-like Lipase/Acylhydrolase family
PDGADOJB_02619 2.4e-127 ydcF S Gram-negative-bacterium-type cell wall biogenesis
PDGADOJB_02620 1.3e-136 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PDGADOJB_02621 1.2e-182 yfeX P Peroxidase
PDGADOJB_02622 6.7e-99 K transcriptional regulator
PDGADOJB_02623 2.6e-159 4.1.1.46 S Amidohydrolase
PDGADOJB_02624 3.1e-32 S Uncharacterized protein conserved in bacteria (DUF2316)
PDGADOJB_02625 8.1e-108
PDGADOJB_02627 2.1e-61
PDGADOJB_02628 1.1e-53
PDGADOJB_02629 1.5e-75 mltD CBM50 M PFAM NLP P60 protein
PDGADOJB_02630 1.9e-285 gadB 4.1.1.15 E Belongs to the group II decarboxylase family
PDGADOJB_02631 1.8e-27
PDGADOJB_02632 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
PDGADOJB_02633 2.4e-116 luxT K Bacterial regulatory proteins, tetR family
PDGADOJB_02634 1.2e-88 K Winged helix DNA-binding domain
PDGADOJB_02635 1.3e-136 T Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
PDGADOJB_02636 1.7e-129 S WxL domain surface cell wall-binding
PDGADOJB_02637 1.5e-186 S Bacterial protein of unknown function (DUF916)
PDGADOJB_02638 0.0
PDGADOJB_02639 1e-160 ypuA S Protein of unknown function (DUF1002)
PDGADOJB_02640 5.5e-50 yvlA
PDGADOJB_02641 1.2e-95 K transcriptional regulator
PDGADOJB_02642 1.3e-90 ymdB S Macro domain protein
PDGADOJB_02643 1.5e-147 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PDGADOJB_02644 2.3e-43 S Protein of unknown function (DUF1093)
PDGADOJB_02645 2e-77 S Threonine/Serine exporter, ThrE
PDGADOJB_02646 5e-131 thrE S Putative threonine/serine exporter
PDGADOJB_02647 5.2e-164 yvgN C Aldo keto reductase
PDGADOJB_02648 3.8e-152 ywkB S Membrane transport protein
PDGADOJB_02649 2.1e-311 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PDGADOJB_02650 0.0 pacL3 3.6.3.8 P Cation transporter/ATPase, N-terminus
PDGADOJB_02651 1.3e-84 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
PDGADOJB_02652 3.1e-78 M1-874 K Domain of unknown function (DUF1836)
PDGADOJB_02653 6.8e-181 D Alpha beta
PDGADOJB_02654 7.7e-214 mdtG EGP Major facilitator Superfamily
PDGADOJB_02655 1.2e-250 U Belongs to the purine-cytosine permease (2.A.39) family
PDGADOJB_02656 9.4e-65 ycgX S Protein of unknown function (DUF1398)
PDGADOJB_02657 4.2e-49
PDGADOJB_02658 3.4e-25
PDGADOJB_02659 2.5e-248 lmrB EGP Major facilitator Superfamily
PDGADOJB_02660 7.7e-73 S COG NOG18757 non supervised orthologous group
PDGADOJB_02661 7.4e-40
PDGADOJB_02662 4.7e-73 copR K Copper transport repressor CopY TcrY
PDGADOJB_02663 0.0 copB 3.6.3.4 P P-type ATPase
PDGADOJB_02664 1.3e-190 pva2 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
PDGADOJB_02665 1.4e-111 S VIT family
PDGADOJB_02666 1.8e-119 S membrane
PDGADOJB_02667 5.9e-158 EG EamA-like transporter family
PDGADOJB_02668 1.3e-81 elaA S GNAT family
PDGADOJB_02669 1.1e-115 GM NmrA-like family
PDGADOJB_02670 2.1e-14
PDGADOJB_02671 7e-56
PDGADOJB_02672 2e-79 hsp3 O Belongs to the small heat shock protein (HSP20) family
PDGADOJB_02673 1.3e-85
PDGADOJB_02674 1.9e-62
PDGADOJB_02675 4.1e-214 mutY L A G-specific adenine glycosylase
PDGADOJB_02676 4e-53
PDGADOJB_02677 6.3e-66 yeaO S Protein of unknown function, DUF488
PDGADOJB_02678 7e-71 spx4 1.20.4.1 P ArsC family
PDGADOJB_02679 9.2e-66 K Winged helix DNA-binding domain
PDGADOJB_02680 4.8e-162 azoB GM NmrA-like family
PDGADOJB_02681 7.3e-86 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
PDGADOJB_02682 1.8e-167 S Alpha/beta hydrolase of unknown function (DUF915)
PDGADOJB_02683 2.4e-251 cycA E Amino acid permease
PDGADOJB_02684 1.2e-255 nhaC C Na H antiporter NhaC
PDGADOJB_02685 2.8e-27 3.2.2.10 S Belongs to the LOG family
PDGADOJB_02686 1.3e-199 frlB M SIS domain
PDGADOJB_02687 0.0 ade 3.5.4.2 F Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PDGADOJB_02688 1.8e-220 S Uncharacterized protein conserved in bacteria (DUF2325)
PDGADOJB_02689 1.9e-124 yyaQ S YjbR
PDGADOJB_02691 0.0 cadA P P-type ATPase
PDGADOJB_02692 1.1e-306 U Belongs to the BCCT transporter (TC 2.A.15) family
PDGADOJB_02693 1.7e-119 E GDSL-like Lipase/Acylhydrolase family
PDGADOJB_02694 1.4e-77
PDGADOJB_02695 8.1e-38 S Bacteriocin-protection, YdeI or OmpD-Associated
PDGADOJB_02696 3.7e-96 FG HIT domain
PDGADOJB_02697 5.9e-174 S Aldo keto reductase
PDGADOJB_02698 5.1e-53 yitW S Pfam:DUF59
PDGADOJB_02699 6.7e-161 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDGADOJB_02700 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
PDGADOJB_02701 5e-195 blaA6 V Beta-lactamase
PDGADOJB_02702 1.4e-95 V VanZ like family
PDGADOJB_02703 1.8e-181 oppF P Belongs to the ABC transporter superfamily
PDGADOJB_02704 9.2e-203 oppD P Belongs to the ABC transporter superfamily
PDGADOJB_02705 1.1e-189 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PDGADOJB_02706 2.3e-165 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PDGADOJB_02707 1.3e-309 oppA E ABC transporter, substratebinding protein
PDGADOJB_02708 3.2e-57 ywjH S Protein of unknown function (DUF1634)
PDGADOJB_02709 5.5e-126 yxaA S membrane transporter protein
PDGADOJB_02710 7.1e-161 lysR5 K LysR substrate binding domain
PDGADOJB_02711 5.5e-197 M MucBP domain
PDGADOJB_02712 2.9e-273
PDGADOJB_02713 6.9e-308 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PDGADOJB_02714 3.1e-253 gor 1.8.1.7 C Glutathione reductase
PDGADOJB_02715 4.3e-169 gnd 1.1.1.343, 1.1.1.44 G Dehydrogenase
PDGADOJB_02716 1e-292 gntK 2.7.1.12, 2.7.1.16, 2.7.1.17, 2.7.1.5 G Belongs to the FGGY kinase family
PDGADOJB_02717 9.5e-213 gntP EG Gluconate
PDGADOJB_02718 3.7e-72 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
PDGADOJB_02719 9.3e-188 yueF S AI-2E family transporter
PDGADOJB_02720 1.3e-168 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PDGADOJB_02721 2.5e-145 pbpX V Beta-lactamase
PDGADOJB_02722 1.3e-27 S Antitoxin component of a toxin-antitoxin (TA) module
PDGADOJB_02723 7.8e-48 K sequence-specific DNA binding
PDGADOJB_02724 4e-133 cwlO M NlpC/P60 family
PDGADOJB_02725 4.1e-106 ygaC J Belongs to the UPF0374 family
PDGADOJB_02726 2.2e-140 recX 2.4.1.337 GT4 S Regulatory protein RecX
PDGADOJB_02727 3.9e-125
PDGADOJB_02728 3e-101 K DNA-templated transcription, initiation
PDGADOJB_02729 1.3e-25
PDGADOJB_02730 7e-30
PDGADOJB_02731 7.3e-33 S Protein of unknown function (DUF2922)
PDGADOJB_02732 1.1e-52
PDGADOJB_02733 3.2e-121 rfbP M Bacterial sugar transferase
PDGADOJB_02734 7e-259 rfbX S Membrane protein involved in the export of O-antigen and teichoic acid
PDGADOJB_02735 9.6e-74 K helix_turn_helix multiple antibiotic resistance protein
PDGADOJB_02736 0.0 M Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
PDGADOJB_02737 6.7e-136 K helix_turn_helix, arabinose operon control protein
PDGADOJB_02738 1.4e-147 cps1D M Domain of unknown function (DUF4422)
PDGADOJB_02739 4.3e-200 cps3I G Acyltransferase family
PDGADOJB_02740 1.1e-203 cps3H
PDGADOJB_02741 4.7e-155 cps3F
PDGADOJB_02742 5.3e-110 cps3E
PDGADOJB_02743 4.9e-204 cps3D
PDGADOJB_02744 1.1e-222 glf 5.4.99.9 M UDP-galactopyranose mutase
PDGADOJB_02745 2.8e-179 cps3B S Glycosyltransferase like family 2
PDGADOJB_02746 6.5e-133 cps3A S Glycosyltransferase like family 2
PDGADOJB_02747 9e-19 relB L bacterial-type proximal promoter sequence-specific DNA binding
PDGADOJB_02748 1.1e-92 S Acyltransferase family
PDGADOJB_02749 7.3e-241 cps2I S Psort location CytoplasmicMembrane, score
PDGADOJB_02750 3.5e-132 sacB GT2,GT4 M Stealth protein CR2, conserved region 2
PDGADOJB_02751 2.7e-127 waaB GT4 M Glycosyl transferases group 1
PDGADOJB_02753 7.8e-151 sacB GT2,GT4 M Stealth protein CR2, conserved region 2
PDGADOJB_02754 2.9e-40 wceM M Glycosyltransferase like family 2
PDGADOJB_02755 1.4e-124 tuaA M Bacterial sugar transferase
PDGADOJB_02756 4.6e-174 cps2D 5.1.3.2 M RmlD substrate binding domain
PDGADOJB_02757 3e-139 ywqE 3.1.3.48 GM PHP domain protein
PDGADOJB_02758 1.3e-128 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PDGADOJB_02759 3.9e-131 epsB M biosynthesis protein
PDGADOJB_02760 7.1e-77 L Integrase
PDGADOJB_02761 2.3e-156 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PDGADOJB_02762 2.1e-204 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PDGADOJB_02763 9.7e-106 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PDGADOJB_02764 1e-225 rfbX S Membrane protein involved in the export of O-antigen and teichoic acid
PDGADOJB_02765 8.5e-160 rfbJ M Glycosyl transferase family 2
PDGADOJB_02766 2.1e-138 3.2.1.26, 3.2.1.65 GH32 G Belongs to the glycosyl hydrolase 32 family
PDGADOJB_02767 1.4e-120 1.1.1.133 S Glycosyltransferase like family 2
PDGADOJB_02768 3.4e-147 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PDGADOJB_02769 2.2e-131 rgpB GT2 M Glycosyl transferase family 2
PDGADOJB_02770 6.5e-88 welB S Glycosyltransferase like family 2
PDGADOJB_02771 1.4e-78 S Glycosyl transferase family 2
PDGADOJB_02772 1.6e-136 rfbN GT2 S Glycosyltransferase like family 2
PDGADOJB_02773 2.3e-168 cps3F
PDGADOJB_02775 9.3e-113 cps3D
PDGADOJB_02776 2.6e-304
PDGADOJB_02777 1.1e-50 gtcA S Teichoic acid glycosylation protein
PDGADOJB_02778 3.2e-214 glf 5.4.99.9 M UDP-galactopyranose mutase
PDGADOJB_02779 9.7e-132 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PDGADOJB_02780 1.3e-157 yihY S Belongs to the UPF0761 family
PDGADOJB_02781 6.8e-209 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PDGADOJB_02782 1.2e-219 pbpX1 V Beta-lactamase
PDGADOJB_02783 1.7e-254 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
PDGADOJB_02784 5e-107
PDGADOJB_02785 1.3e-73
PDGADOJB_02787 1.8e-164 S Alpha/beta hydrolase of unknown function (DUF915)
PDGADOJB_02788 1.4e-245 pts14C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDGADOJB_02789 2.3e-75 T Universal stress protein family
PDGADOJB_02791 2.6e-239 yfmL 3.6.4.13 L DEAD DEAH box helicase
PDGADOJB_02792 8.4e-190 mocA S Oxidoreductase
PDGADOJB_02793 2.7e-31 cspA K 'Cold-shock' DNA-binding domain
PDGADOJB_02794 1.1e-62 S Domain of unknown function (DUF4828)
PDGADOJB_02795 1.1e-144 lys M Glycosyl hydrolases family 25
PDGADOJB_02796 2.3e-151 gntR K rpiR family
PDGADOJB_02797 6.1e-168 S Alpha/beta hydrolase of unknown function (DUF915)
PDGADOJB_02798 4e-240 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDGADOJB_02799 0.0 yfgQ P E1-E2 ATPase
PDGADOJB_02800 2.1e-100 yobS K Bacterial regulatory proteins, tetR family
PDGADOJB_02801 4e-259 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDGADOJB_02802 1e-190 yegS 2.7.1.107 G Lipid kinase
PDGADOJB_02803 7.7e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDGADOJB_02804 2.5e-275 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PDGADOJB_02805 3.2e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDGADOJB_02806 2.6e-198 camS S sex pheromone
PDGADOJB_02807 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PDGADOJB_02808 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PDGADOJB_02809 2.2e-218 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PDGADOJB_02810 1e-93 S UPF0316 protein
PDGADOJB_02811 2.7e-103 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PDGADOJB_02812 2.6e-112 acmA 3.2.1.17 NU mannosyl-glycoprotein
PDGADOJB_02813 3.3e-183 S Oxidoreductase family, NAD-binding Rossmann fold
PDGADOJB_02814 2.9e-165 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PDGADOJB_02815 2.3e-182 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PDGADOJB_02816 6.9e-157 ddpX 3.4.13.22 S L,D-transpeptidase catalytic domain
PDGADOJB_02817 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PDGADOJB_02818 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PDGADOJB_02819 2.6e-183 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
PDGADOJB_02820 7.1e-275 cydA 1.10.3.14 C ubiquinol oxidase
PDGADOJB_02821 5.5e-305 S Alpha beta
PDGADOJB_02822 3.1e-23
PDGADOJB_02823 3.9e-99 S ECF transporter, substrate-specific component
PDGADOJB_02824 1.1e-243 yfnA E Amino Acid
PDGADOJB_02825 1.4e-165 mleP S Sodium Bile acid symporter family
PDGADOJB_02826 1.6e-307 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
PDGADOJB_02827 1.2e-166 mleR K LysR family
PDGADOJB_02828 1.2e-160 mleR K LysR family transcriptional regulator
PDGADOJB_02829 7.1e-95 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PDGADOJB_02830 2.1e-263 frdC 1.3.5.4 C FAD binding domain
PDGADOJB_02831 6.4e-257 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PDGADOJB_02833 8.1e-84 3.2.1.17, 3.5.1.28 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PDGADOJB_02834 4.2e-71 3.2.1.17, 3.4.17.14, 3.5.1.28 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PDGADOJB_02835 1.2e-104 M ErfK YbiS YcfS YnhG
PDGADOJB_02836 2.3e-101 akr5f 1.1.1.346 S reductase
PDGADOJB_02837 4.6e-35 S aldo-keto reductase (NADP) activity
PDGADOJB_02838 3.3e-109 GM NAD(P)H-binding
PDGADOJB_02839 2.2e-78 3.5.4.1 GM SnoaL-like domain
PDGADOJB_02840 5.5e-259 qacA EGP Fungal trichothecene efflux pump (TRI12)
PDGADOJB_02841 9.2e-65 S Domain of unknown function (DUF4440)
PDGADOJB_02842 2.4e-104 K Bacterial regulatory proteins, tetR family
PDGADOJB_02844 1.5e-32 L transposase activity
PDGADOJB_02846 8.8e-40
PDGADOJB_02847 7.9e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDGADOJB_02848 1.9e-171 K AI-2E family transporter
PDGADOJB_02849 2.9e-210 xylR GK ROK family
PDGADOJB_02850 2.1e-79
PDGADOJB_02851 4.7e-232 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PDGADOJB_02852 3.9e-162
PDGADOJB_02853 3.2e-200 KLT Protein tyrosine kinase
PDGADOJB_02854 2.9e-23 S Protein of unknown function (DUF4064)
PDGADOJB_02855 6e-97 S Domain of unknown function (DUF4352)
PDGADOJB_02856 3.9e-75 S Psort location Cytoplasmic, score
PDGADOJB_02857 4.8e-55
PDGADOJB_02858 3.6e-110 S membrane transporter protein
PDGADOJB_02859 2.3e-54 azlD S branched-chain amino acid
PDGADOJB_02860 2.8e-126 azlC E branched-chain amino acid
PDGADOJB_02861 1.3e-90 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
PDGADOJB_02862 4.9e-238 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PDGADOJB_02863 1.3e-213 hpk31 2.7.13.3 T Histidine kinase
PDGADOJB_02864 3.2e-124 K response regulator
PDGADOJB_02865 5.5e-124 yoaK S Protein of unknown function (DUF1275)
PDGADOJB_02866 2.9e-160 prsA 3.1.3.16, 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PDGADOJB_02867 2.3e-212 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PDGADOJB_02868 5.2e-125 XK27_01040 S Protein of unknown function (DUF1129)
PDGADOJB_02869 2e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PDGADOJB_02870 9.8e-31 yyzM S Bacterial protein of unknown function (DUF951)
PDGADOJB_02871 4.8e-157 spo0J K Belongs to the ParB family
PDGADOJB_02872 1.8e-136 soj D Sporulation initiation inhibitor
PDGADOJB_02873 2.7e-149 noc K Belongs to the ParB family
PDGADOJB_02874 1.7e-128 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PDGADOJB_02875 4.1e-226 nupG F Nucleoside
PDGADOJB_02876 0.0 S Bacterial membrane protein YfhO
PDGADOJB_02877 4.3e-147 S Alpha/beta hydrolase of unknown function (DUF915)
PDGADOJB_02878 2.1e-168 K LysR substrate binding domain
PDGADOJB_02879 1.9e-236 EK Aminotransferase, class I
PDGADOJB_02880 2.3e-126 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PDGADOJB_02881 8.1e-123 tcyB E ABC transporter
PDGADOJB_02882 3.6e-137 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDGADOJB_02883 1.3e-129 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PDGADOJB_02884 3.8e-78 KT response to antibiotic
PDGADOJB_02885 1.5e-52 K Transcriptional regulator
PDGADOJB_02886 7.7e-72 XK27_06920 S Protein of unknown function (DUF1700)
PDGADOJB_02887 1.7e-128 S Putative adhesin
PDGADOJB_02888 0.0 scrA 2.7.1.193, 2.7.1.211 G phosphotransferase system
PDGADOJB_02889 0.0 malA 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
PDGADOJB_02890 3.7e-182 5.1.1.1 K Periplasmic binding proteins and sugar binding domain of LacI family
PDGADOJB_02891 2.2e-204 S DUF218 domain
PDGADOJB_02892 2e-127 ybbM S Uncharacterised protein family (UPF0014)
PDGADOJB_02893 9.4e-118 ybbL S ABC transporter, ATP-binding protein
PDGADOJB_02894 4.2e-275 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDGADOJB_02895 9.4e-77
PDGADOJB_02896 3.4e-152 qorB 1.6.5.2 GM NmrA-like family
PDGADOJB_02897 1.4e-147 cof S haloacid dehalogenase-like hydrolase
PDGADOJB_02898 1.1e-92 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PDGADOJB_02899 1.5e-307 mngB 3.2.1.170, 3.2.1.24 GH38 G Glycosyl hydrolases family 38 N-terminal domain
PDGADOJB_02900 2.8e-122 mngA 2.7.1.195, 2.7.1.202 U Phosphotransferase system, EIIC
PDGADOJB_02901 2.4e-26 mngA 2.7.1.195, 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
PDGADOJB_02902 2.9e-20 fryA 2.7.1.202 G COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type)
PDGADOJB_02903 2.2e-90 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDGADOJB_02904 2e-77 merR K MerR family regulatory protein
PDGADOJB_02905 1.4e-156 1.6.5.2 GM NmrA-like family
PDGADOJB_02906 0.0 treB 2.7.1.193, 2.7.1.211 G phosphotransferase system
PDGADOJB_02907 4.3e-126 magIII L Base excision DNA repair protein, HhH-GPD family
PDGADOJB_02908 1.4e-08
PDGADOJB_02909 2e-100 S NADPH-dependent FMN reductase
PDGADOJB_02910 3e-237 S module of peptide synthetase
PDGADOJB_02911 2.5e-104
PDGADOJB_02912 9.8e-88 perR P Belongs to the Fur family
PDGADOJB_02913 2.1e-58 S Enterocin A Immunity
PDGADOJB_02914 5.4e-36 S Phospholipase_D-nuclease N-terminal
PDGADOJB_02915 1.8e-169 cpdA 2.1.2.2, 3.1.4.17, 3.1.4.53 S Calcineurin-like phosphoesterase
PDGADOJB_02916 3.8e-104 J Acetyltransferase (GNAT) domain
PDGADOJB_02917 4.3e-63 lrgA S LrgA family
PDGADOJB_02918 7.3e-127 lrgB M LrgB-like family
PDGADOJB_02919 2.5e-145 DegV S EDD domain protein, DegV family
PDGADOJB_02920 4.1e-25
PDGADOJB_02921 1.3e-117 yugP S Putative neutral zinc metallopeptidase
PDGADOJB_02922 3.2e-294 crtI 1.3.99.26, 1.3.99.28, 1.3.99.29, 1.3.99.31 Q Flavin containing amine oxidoreductase
PDGADOJB_02923 2.8e-165 crtB 2.5.1.21, 2.5.1.32, 2.5.1.99 I Squalene/phytoene synthase
PDGADOJB_02924 1.7e-184 D Alpha beta
PDGADOJB_02925 7.1e-198 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PDGADOJB_02926 8.1e-257 gor 1.8.1.7 C Glutathione reductase
PDGADOJB_02927 3.4e-55 S Enterocin A Immunity
PDGADOJB_02928 7.4e-247 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PDGADOJB_02929 1.4e-253 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PDGADOJB_02930 3.5e-185 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PDGADOJB_02931 1.3e-145 ptp2 3.1.3.48 T Tyrosine phosphatase family
PDGADOJB_02932 1.4e-278 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDGADOJB_02934 7.3e-83
PDGADOJB_02935 6.6e-257 yhdG E C-terminus of AA_permease
PDGADOJB_02937 0.0 kup P Transport of potassium into the cell
PDGADOJB_02938 4.6e-166 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PDGADOJB_02939 3.1e-179 K AI-2E family transporter
PDGADOJB_02940 7.6e-216 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
PDGADOJB_02941 4.4e-59 qacC P Small Multidrug Resistance protein
PDGADOJB_02942 1.1e-44 qacH U Small Multidrug Resistance protein
PDGADOJB_02943 3e-116 hly S protein, hemolysin III
PDGADOJB_02944 5.1e-54 nmtR K helix_turn_helix, Arsenical Resistance Operon Repressor
PDGADOJB_02945 2.7e-160 czcD P cation diffusion facilitator family transporter
PDGADOJB_02946 5.1e-102 K Helix-turn-helix XRE-family like proteins
PDGADOJB_02948 2.1e-21
PDGADOJB_02949 6.5e-96 tag 3.2.2.20 L glycosylase
PDGADOJB_02950 6.8e-212 folP 2.5.1.15 H dihydropteroate synthase
PDGADOJB_02951 7.7e-103 xtp 2.5.1.15, 3.6.1.66 F Ham1 family
PDGADOJB_02952 4.1e-248 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PDGADOJB_02953 2.6e-103 folE 2.7.6.3, 3.5.4.16 F GTP cyclohydrolase 1
PDGADOJB_02954 2.8e-93 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
PDGADOJB_02955 2.2e-63 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PDGADOJB_02956 4.7e-83 cvpA S Colicin V production protein
PDGADOJB_02957 2e-169 znuA P Belongs to the bacterial solute-binding protein 9 family
PDGADOJB_02958 1.3e-249 EGP Major facilitator Superfamily
PDGADOJB_02960 1.2e-39
PDGADOJB_02963 0.0 S Pfam Methyltransferase
PDGADOJB_02964 2e-267 tagE2 2.4.1.52 GT4 M Glycosyl transferases group 1
PDGADOJB_02965 1.8e-297 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
PDGADOJB_02966 4.2e-29
PDGADOJB_02967 4.5e-94 ytqB 2.1.1.176 J Putative rRNA methylase
PDGADOJB_02968 2.3e-124 3.6.1.27 I Acid phosphatase homologues
PDGADOJB_02969 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDGADOJB_02970 8.7e-301 ytgP S Polysaccharide biosynthesis protein
PDGADOJB_02971 6.7e-136 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PDGADOJB_02972 6.4e-151 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PDGADOJB_02973 1.7e-273 pepV 3.5.1.18 E dipeptidase PepV
PDGADOJB_02974 4.1e-84 uspA T Belongs to the universal stress protein A family
PDGADOJB_02975 1.8e-201 ugpC 3.6.3.20 E Belongs to the ABC transporter superfamily
PDGADOJB_02976 6.8e-173 ugpA U Binding-protein-dependent transport system inner membrane component
PDGADOJB_02977 1.1e-150 ugpE G ABC transporter permease
PDGADOJB_02978 5.5e-261 ugpB G Bacterial extracellular solute-binding protein
PDGADOJB_02979 3.8e-125 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PDGADOJB_02980 3.8e-119 dck 2.7.1.74 F deoxynucleoside kinase
PDGADOJB_02981 5.5e-41 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PDGADOJB_02982 1.5e-178 XK27_06930 V domain protein
PDGADOJB_02984 1.1e-114 V Transport permease protein
PDGADOJB_02985 2.3e-156 V ABC transporter
PDGADOJB_02986 4e-176 K LytTr DNA-binding domain
PDGADOJB_02988 3.1e-155 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PDGADOJB_02989 3.2e-38 K helix_turn_helix, mercury resistance
PDGADOJB_02990 3.5e-117 GM NAD(P)H-binding
PDGADOJB_02991 9.3e-159 ypaH EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PDGADOJB_02992 2.9e-148 S Sucrose-6F-phosphate phosphohydrolase
PDGADOJB_02993 1.7e-108
PDGADOJB_02994 2.2e-224 pltK 2.7.13.3 T GHKL domain
PDGADOJB_02995 1.6e-137 pltR K LytTr DNA-binding domain
PDGADOJB_02996 4.5e-55
PDGADOJB_02997 2.5e-59
PDGADOJB_02998 1.9e-113 S CAAX protease self-immunity
PDGADOJB_02999 1.6e-85 ohrR K helix_turn_helix multiple antibiotic resistance protein
PDGADOJB_03000 1.9e-89
PDGADOJB_03001 2.5e-46
PDGADOJB_03002 0.0 uvrA2 L ABC transporter
PDGADOJB_03005 5.9e-52
PDGADOJB_03006 3.5e-10
PDGADOJB_03007 2.1e-180
PDGADOJB_03008 1.9e-89 gtcA S Teichoic acid glycosylation protein
PDGADOJB_03009 3.6e-58 S Protein of unknown function (DUF1516)
PDGADOJB_03010 0.0 yitJ 1.5.1.20, 2.1.1.10, 2.1.1.13 E catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
PDGADOJB_03011 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PDGADOJB_03012 6.1e-307 S Protein conserved in bacteria
PDGADOJB_03013 1.3e-229 sat 2.7.7.4 H the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms
PDGADOJB_03014 2.5e-112 cysC 2.7.1.25, 2.7.7.4 F Catalyzes the synthesis of activated sulfate
PDGADOJB_03015 1.5e-175 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain
PDGADOJB_03016 3.9e-304 astA 2.8.2.22 M Arylsulfotransferase Ig-like domain
PDGADOJB_03017 0.0 yfbS P Sodium:sulfate symporter transmembrane region
PDGADOJB_03018 2.1e-244 dinF V MatE
PDGADOJB_03019 1.9e-31
PDGADOJB_03022 7.7e-79 elaA S Acetyltransferase (GNAT) domain
PDGADOJB_03023 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PDGADOJB_03024 1.4e-81
PDGADOJB_03025 0.0 yhcA V MacB-like periplasmic core domain
PDGADOJB_03026 7.6e-107
PDGADOJB_03027 0.0 K PRD domain
PDGADOJB_03028 5.9e-61 S Domain of unknown function (DUF3284)
PDGADOJB_03029 1.4e-51 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
PDGADOJB_03030 1.1e-47 pts15B 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PDGADOJB_03031 1.6e-244 pts15C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDGADOJB_03032 1.5e-288 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDGADOJB_03033 1.1e-204 EGP Major facilitator Superfamily
PDGADOJB_03034 2e-114 M ErfK YbiS YcfS YnhG
PDGADOJB_03035 4e-34 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDGADOJB_03036 8.4e-284 ydfD K Alanine-glyoxylate amino-transferase
PDGADOJB_03037 4e-102 argO S LysE type translocator
PDGADOJB_03038 1.3e-212 arcT 2.6.1.1 E Aminotransferase
PDGADOJB_03039 4.4e-77 argR K Regulates arginine biosynthesis genes
PDGADOJB_03040 2.9e-12
PDGADOJB_03041 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PDGADOJB_03042 1e-54 yheA S Belongs to the UPF0342 family
PDGADOJB_03043 6.3e-232 yhaO L Ser Thr phosphatase family protein
PDGADOJB_03044 0.0 L AAA domain
PDGADOJB_03045 2.9e-187 yhaM S Metal dependent phosphohydrolases with conserved 'HD' motif.
PDGADOJB_03046 2.7e-216
PDGADOJB_03047 3.2e-124 3.4.21.102 M Peptidase family S41
PDGADOJB_03048 1.2e-177 K LysR substrate binding domain
PDGADOJB_03049 2.1e-111 1.3.5.4 S NADPH-dependent FMN reductase
PDGADOJB_03050 0.0 1.3.5.4 C FAD binding domain
PDGADOJB_03051 1.7e-99
PDGADOJB_03052 3.5e-76 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
PDGADOJB_03053 8.4e-60 M domain protein
PDGADOJB_03054 1.6e-22 M domain protein
PDGADOJB_03055 1.4e-72 M domain protein
PDGADOJB_03056 5.7e-23 M domain protein

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)