ORF_ID e_value Gene_name EC_number CAZy COGs Description
MODELEPE_00001 1.3e-107 L PFAM Integrase catalytic
MODELEPE_00002 2.9e-31 L PFAM Integrase catalytic
MODELEPE_00004 7.1e-122 XK27_00240 K Fic/DOC family
MODELEPE_00005 2.3e-54
MODELEPE_00007 2e-13
MODELEPE_00008 1.3e-09 S Predicted membrane protein (DUF2335)
MODELEPE_00010 1.4e-67 int8 L Phage integrase family
MODELEPE_00011 1.3e-15 int8 L Phage integrase family
MODELEPE_00012 6e-08 int8 L Phage integrase family
MODELEPE_00013 5.4e-93
MODELEPE_00014 2.3e-281 sdaA 4.3.1.17 E Serine dehydratase alpha chain
MODELEPE_00015 1.4e-74 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
MODELEPE_00016 9.8e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
MODELEPE_00017 3.1e-146 yplQ S Haemolysin-III related
MODELEPE_00018 7.5e-280 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
MODELEPE_00019 4.9e-47 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
MODELEPE_00020 0.0 D FtsK/SpoIIIE family
MODELEPE_00021 1.4e-205 K Cell envelope-related transcriptional attenuator domain
MODELEPE_00022 1.8e-55 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
MODELEPE_00023 0.0 S Glycosyl transferase, family 2
MODELEPE_00024 8.7e-255
MODELEPE_00025 6.3e-78 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
MODELEPE_00026 2.2e-148 cof 5.2.1.8 T Eukaryotic phosphomannomutase
MODELEPE_00027 1.1e-121 ctsW S Phosphoribosyl transferase domain
MODELEPE_00028 4.9e-196 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
MODELEPE_00029 1e-128 T Response regulator receiver domain protein
MODELEPE_00030 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
MODELEPE_00031 2.1e-100 carD K CarD-like/TRCF domain
MODELEPE_00032 6.2e-88 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
MODELEPE_00033 4e-137 znuB U ABC 3 transport family
MODELEPE_00034 2.4e-161 znuC P ATPases associated with a variety of cellular activities
MODELEPE_00035 1.6e-184 P Zinc-uptake complex component A periplasmic
MODELEPE_00036 6.9e-164 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
MODELEPE_00037 3.2e-254 rpsA J Ribosomal protein S1
MODELEPE_00038 1.6e-115 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
MODELEPE_00039 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
MODELEPE_00040 1e-176 terC P Integral membrane protein, TerC family
MODELEPE_00041 1e-273 pyk 2.7.1.40 G Pyruvate kinase
MODELEPE_00042 1.1e-109 aspA 3.6.1.13 L NUDIX domain
MODELEPE_00044 2.8e-124 pdtaR T Response regulator receiver domain protein
MODELEPE_00045 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
MODELEPE_00046 5.1e-178 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
MODELEPE_00047 4e-127 3.6.1.13 L NUDIX domain
MODELEPE_00048 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
MODELEPE_00049 1.4e-24 zntR K bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
MODELEPE_00050 4.8e-90 K Putative zinc ribbon domain
MODELEPE_00051 1.8e-121 S GyrI-like small molecule binding domain
MODELEPE_00053 5.6e-21 tag 3.2.2.20 L Methyladenine glycosylase
MODELEPE_00055 2.7e-103 L Resolvase, N terminal domain
MODELEPE_00056 4e-40 L PFAM Integrase catalytic
MODELEPE_00057 1.2e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
MODELEPE_00058 5.9e-83 argR K Regulates arginine biosynthesis genes
MODELEPE_00059 3.9e-184 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
MODELEPE_00060 1.3e-248 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
MODELEPE_00061 8.2e-179 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
MODELEPE_00062 2.4e-212 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
MODELEPE_00063 5e-204 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
MODELEPE_00064 3.5e-88
MODELEPE_00065 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
MODELEPE_00066 7.7e-202 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
MODELEPE_00067 1.3e-159 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
MODELEPE_00068 1.9e-159 cbiQ P Cobalt transport protein
MODELEPE_00069 7.5e-280 ykoD P ATPases associated with a variety of cellular activities
MODELEPE_00070 2.4e-107 ykoE S ABC-type cobalt transport system, permease component
MODELEPE_00071 2.1e-260 argE E Peptidase dimerisation domain
MODELEPE_00072 6.9e-102 S Protein of unknown function (DUF3043)
MODELEPE_00073 4.2e-278 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MODELEPE_00074 9.2e-144 S Domain of unknown function (DUF4191)
MODELEPE_00075 2.3e-281 glnA 6.3.1.2 E glutamine synthetase
MODELEPE_00076 6e-205 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
MODELEPE_00077 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
MODELEPE_00078 0.0 S Tetratricopeptide repeat
MODELEPE_00079 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
MODELEPE_00081 3.9e-142 bioM P ATPases associated with a variety of cellular activities
MODELEPE_00082 3.9e-226 E Aminotransferase class I and II
MODELEPE_00083 1.8e-190 P NMT1/THI5 like
MODELEPE_00084 4.5e-135 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
MODELEPE_00085 3.1e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
MODELEPE_00086 4.5e-129 recO L Involved in DNA repair and RecF pathway recombination
MODELEPE_00087 0.0 I acetylesterase activity
MODELEPE_00088 5.3e-231 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
MODELEPE_00089 1.7e-221 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
MODELEPE_00090 8.8e-210 2.7.11.1 NU Tfp pilus assembly protein FimV
MODELEPE_00092 1.6e-73 S Protein of unknown function (DUF3052)
MODELEPE_00093 3.5e-158 lon T Belongs to the peptidase S16 family
MODELEPE_00094 5.4e-120 S Zincin-like metallopeptidase
MODELEPE_00095 9.1e-253 3.2.1.14 GH18 S Carbohydrate binding domain
MODELEPE_00096 0.0 T Diguanylate cyclase, GGDEF domain
MODELEPE_00097 7.1e-136 ybbM V Uncharacterised protein family (UPF0014)
MODELEPE_00098 4.2e-127 ybbL V ATPases associated with a variety of cellular activities
MODELEPE_00099 3.9e-104 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
MODELEPE_00100 1.9e-92 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
MODELEPE_00101 2e-241 carA 6.3.5.5 F Belongs to the CarA family
MODELEPE_00102 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
MODELEPE_00103 6.7e-170 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
MODELEPE_00104 1.4e-104 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
MODELEPE_00105 3.7e-136 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
MODELEPE_00107 0.0 tetP J Elongation factor G, domain IV
MODELEPE_00108 3.9e-125 ypfH S Phospholipase/Carboxylesterase
MODELEPE_00109 1.2e-233 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
MODELEPE_00111 1.2e-41 XAC3035 O Glutaredoxin
MODELEPE_00112 2.7e-08 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
MODELEPE_00113 7.2e-116 XK27_08050 O prohibitin homologues
MODELEPE_00114 1.1e-58 S Domain of unknown function (DUF4143)
MODELEPE_00115 2.9e-159 S Patatin-like phospholipase
MODELEPE_00116 5.7e-149 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
MODELEPE_00117 2.7e-171 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
MODELEPE_00118 3.8e-128 S Vitamin K epoxide reductase
MODELEPE_00119 1.2e-168 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
MODELEPE_00120 7.2e-33 S Protein of unknown function (DUF3107)
MODELEPE_00121 4.4e-297 mphA S Aminoglycoside phosphotransferase
MODELEPE_00122 5.8e-291 uvrD2 3.6.4.12 L DNA helicase
MODELEPE_00123 5.5e-119 S Zincin-like metallopeptidase
MODELEPE_00124 5.4e-58 L HTH-like domain
MODELEPE_00125 5.3e-27 L PFAM Integrase catalytic
MODELEPE_00126 1.1e-200 L Phage integrase, N-terminal SAM-like domain
MODELEPE_00127 6.6e-192 L Phage integrase family
MODELEPE_00128 7.1e-228 xerC_1 L Belongs to the 'phage' integrase family
MODELEPE_00130 8.9e-184 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
MODELEPE_00131 1.3e-102 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
MODELEPE_00132 6.6e-70 divIC D Septum formation initiator
MODELEPE_00133 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
MODELEPE_00134 7.9e-179 1.1.1.65 C Aldo/keto reductase family
MODELEPE_00135 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
MODELEPE_00136 1.5e-114 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
MODELEPE_00137 4.1e-93 2.3.1.183 M Acetyltransferase (GNAT) domain
MODELEPE_00138 0.0 S Uncharacterised protein family (UPF0182)
MODELEPE_00139 1.4e-17 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
MODELEPE_00140 2.2e-91 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
MODELEPE_00141 3.2e-138 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
MODELEPE_00142 3e-96
MODELEPE_00143 1.3e-235 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
MODELEPE_00144 7.3e-283 thrC 4.2.3.1 E Threonine synthase N terminus
MODELEPE_00145 3.1e-196 S Protein of unknown function (DUF1648)
MODELEPE_00146 7.8e-71 K helix_turn_helix gluconate operon transcriptional repressor
MODELEPE_00147 8.8e-25 pacL2 3.6.3.8 P ATPase, P-type transporting, HAD superfamily, subfamily IC
MODELEPE_00148 1.8e-70 S ABC-2 family transporter protein
MODELEPE_00149 1.7e-120 S ABC-2 family transporter protein
MODELEPE_00150 1.1e-172 V ATPases associated with a variety of cellular activities
MODELEPE_00151 4.8e-58 K helix_turn_helix gluconate operon transcriptional repressor
MODELEPE_00152 2.3e-18 J Acetyltransferase (GNAT) domain
MODELEPE_00153 6e-13 J Acetyltransferase (GNAT) domain
MODELEPE_00154 6.3e-122 S Haloacid dehalogenase-like hydrolase
MODELEPE_00155 0.0 recN L May be involved in recombinational repair of damaged DNA
MODELEPE_00156 3.7e-182 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
MODELEPE_00157 3.8e-49 trkA P TrkA-N domain
MODELEPE_00158 4.7e-96
MODELEPE_00159 6.7e-139 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
MODELEPE_00161 5.4e-200 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
MODELEPE_00162 1.4e-144 L Tetratricopeptide repeat
MODELEPE_00163 2.6e-255 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
MODELEPE_00164 1e-80 S Protein of unknown function (DUF975)
MODELEPE_00165 1.5e-138 S Putative ABC-transporter type IV
MODELEPE_00166 2.4e-101 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
MODELEPE_00167 1.5e-64 M1-798 P Rhodanese Homology Domain
MODELEPE_00168 6e-146 moeB 2.7.7.80 H ThiF family
MODELEPE_00169 3.6e-157 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
MODELEPE_00170 1.2e-28 thiS 2.8.1.10 H ThiS family
MODELEPE_00171 4.4e-280 argH 4.3.2.1 E argininosuccinate lyase
MODELEPE_00172 2.4e-32 relB L RelB antitoxin
MODELEPE_00173 8.5e-44 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
MODELEPE_00174 2.8e-29 L PFAM Integrase catalytic
MODELEPE_00175 9e-09 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
MODELEPE_00176 9.8e-296 L PFAM Integrase catalytic
MODELEPE_00177 3.6e-148 L IstB-like ATP binding protein
MODELEPE_00178 9.8e-296 L PFAM Integrase catalytic
MODELEPE_00179 3.6e-148 L IstB-like ATP binding protein
MODELEPE_00181 2.7e-26 L Transposase
MODELEPE_00183 1.2e-86 pin L Resolvase, N terminal domain
MODELEPE_00184 2.5e-210 G Bacterial extracellular solute-binding protein
MODELEPE_00185 3.3e-126 P Binding-protein-dependent transport system inner membrane component
MODELEPE_00186 2e-128 P Binding-protein-dependent transport systems inner membrane component
MODELEPE_00187 9.7e-258 M Protein of unknown function (DUF2961)
MODELEPE_00188 2.7e-237 bfrA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
MODELEPE_00189 5e-147 K helix_turn _helix lactose operon repressor
MODELEPE_00190 2.6e-14 L PFAM Integrase catalytic
MODELEPE_00191 3.6e-148 L IstB-like ATP binding protein
MODELEPE_00192 9.8e-296 L PFAM Integrase catalytic
MODELEPE_00193 2.9e-176 L Helix-turn-helix domain
MODELEPE_00194 4.8e-108
MODELEPE_00195 4.1e-212 ykiI
MODELEPE_00196 1.3e-251 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
MODELEPE_00197 1.4e-231 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
MODELEPE_00198 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
MODELEPE_00200 3.2e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
MODELEPE_00201 0.0 XK27_09800 I Psort location CytoplasmicMembrane, score 9.99
MODELEPE_00202 1.3e-301 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
MODELEPE_00203 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
MODELEPE_00204 1.3e-262 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
MODELEPE_00205 2.5e-65 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
MODELEPE_00206 2.7e-134 3.1.3.85 G Phosphoglycerate mutase family
MODELEPE_00209 3.6e-157 S Sucrose-6F-phosphate phosphohydrolase
MODELEPE_00210 4.6e-177 metQ P NLPA lipoprotein
MODELEPE_00211 1.4e-220 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
MODELEPE_00212 7.4e-113 metI P Binding-protein-dependent transport system inner membrane component
MODELEPE_00213 1.4e-225 S Peptidase dimerisation domain
MODELEPE_00214 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
MODELEPE_00215 2.6e-38
MODELEPE_00216 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
MODELEPE_00217 8.7e-175 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
MODELEPE_00218 2e-117 S Protein of unknown function (DUF3000)
MODELEPE_00219 4.9e-251 rnd 3.1.13.5 J 3'-5' exonuclease
MODELEPE_00220 4.4e-234 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
MODELEPE_00221 4.2e-240 clcA_2 P Voltage gated chloride channel
MODELEPE_00222 8.9e-60
MODELEPE_00223 6.5e-116 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
MODELEPE_00224 7.3e-121 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
MODELEPE_00225 2.1e-252 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
MODELEPE_00228 1.3e-242 patB 4.4.1.8 E Aminotransferase, class I II
MODELEPE_00229 1.5e-237 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
MODELEPE_00230 1.6e-168 fmt2 3.2.2.10 S Belongs to the LOG family
MODELEPE_00231 2.1e-112 safC S O-methyltransferase
MODELEPE_00232 1.1e-183 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
MODELEPE_00233 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
MODELEPE_00234 0.0 dprA 5.99.1.2 LU DNA recombination-mediator protein A
MODELEPE_00235 6.8e-292 comM O Magnesium chelatase, subunit ChlI C-terminal
MODELEPE_00236 3.7e-75 yraN L Belongs to the UPF0102 family
MODELEPE_00237 1.6e-23 L Transposase and inactivated derivatives IS30 family
MODELEPE_00238 2.8e-165 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
MODELEPE_00239 1e-251 metY 2.5.1.49 E Aminotransferase class-V
MODELEPE_00240 9.8e-169 V ABC transporter, ATP-binding protein
MODELEPE_00241 0.0 MV MacB-like periplasmic core domain
MODELEPE_00242 1.3e-140 K helix_turn_helix, Lux Regulon
MODELEPE_00243 0.0 tcsS2 T Histidine kinase
MODELEPE_00244 4.1e-294 pip 3.4.11.5 S alpha/beta hydrolase fold
MODELEPE_00245 3.2e-147 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
MODELEPE_00246 2.8e-154 cjaA ET Bacterial periplasmic substrate-binding proteins
MODELEPE_00247 5.8e-138 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
MODELEPE_00248 1.2e-118 E Binding-protein-dependent transport system inner membrane component
MODELEPE_00249 7.4e-110 papP E Binding-protein-dependent transport system inner membrane component
MODELEPE_00250 2.8e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
MODELEPE_00251 2.3e-57 yccF S Inner membrane component domain
MODELEPE_00252 5.9e-12
MODELEPE_00253 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
MODELEPE_00254 1.2e-196 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
MODELEPE_00255 3.6e-148 L IstB-like ATP binding protein
MODELEPE_00256 9.8e-296 L PFAM Integrase catalytic
MODELEPE_00257 7.9e-67 L Transposase
MODELEPE_00258 3.2e-193 G Periplasmic binding protein domain
MODELEPE_00259 4.9e-290 3.6.3.17 G ATPases associated with a variety of cellular activities
MODELEPE_00260 2.7e-134 3.6.3.17 U Branched-chain amino acid transport system / permease component
MODELEPE_00261 0.0 3.2.1.23 G Glycosyl hydrolases family 35
MODELEPE_00262 1.4e-144
MODELEPE_00263 2.6e-197 K helix_turn _helix lactose operon repressor
MODELEPE_00264 7.3e-13 maa 2.3.1.18, 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
MODELEPE_00265 1.7e-68 maa 2.3.1.18, 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
MODELEPE_00266 1.8e-42 L Transposase
MODELEPE_00267 1.4e-28 L Transposase
MODELEPE_00268 3.8e-89 L Transposase
MODELEPE_00269 6.6e-10 ydcK 3.2.1.23, 5.4.2.9 JM Carbohydrate binding module (family 6)
MODELEPE_00270 6.5e-09 ydcK 5.4.2.9 JM Carbohydrate binding module (family 6)
MODELEPE_00271 2.1e-91 ydgJ K helix_turn_helix multiple antibiotic resistance protein
MODELEPE_00272 0.0 lmrA1 V ABC transporter, ATP-binding protein
MODELEPE_00273 0.0 lmrA2 V ABC transporter transmembrane region
MODELEPE_00274 3.4e-177 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
MODELEPE_00275 2.9e-257 G MFS/sugar transport protein
MODELEPE_00277 3.1e-184 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
MODELEPE_00278 2.3e-119
MODELEPE_00279 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MODELEPE_00280 6.7e-47
MODELEPE_00281 1.6e-84 pepC 3.4.22.40 E Peptidase C1-like family
MODELEPE_00282 1.5e-149 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
MODELEPE_00283 1e-43 G Glycosyl hydrolases family 43
MODELEPE_00284 2.4e-253 S Domain of unknown function (DUF4143)
MODELEPE_00285 0.0 mdlA2 V ABC transporter
MODELEPE_00286 0.0 yknV V ABC transporter
MODELEPE_00287 5.9e-185 tatD L TatD related DNase
MODELEPE_00288 0.0 kup P Transport of potassium into the cell
MODELEPE_00289 4.6e-160 S Glutamine amidotransferase domain
MODELEPE_00290 9.9e-143 T HD domain
MODELEPE_00291 6.4e-181 V ABC transporter
MODELEPE_00292 4.7e-258 V ABC transporter permease
MODELEPE_00293 1.6e-226 K Cell envelope-related transcriptional attenuator domain
MODELEPE_00295 1.1e-147 lytC 3.1.4.46, 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
MODELEPE_00296 2.9e-67 M L,D-transpeptidase catalytic domain
MODELEPE_00297 4.8e-22 M nuclease
MODELEPE_00298 8.6e-168 rfbJ M Glycosyl transferase family 2
MODELEPE_00299 0.0
MODELEPE_00300 5.5e-205 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
MODELEPE_00301 2.5e-288 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
MODELEPE_00302 7.2e-169 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
MODELEPE_00303 1.4e-118 rgpC U Transport permease protein
MODELEPE_00304 1.1e-164 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
MODELEPE_00305 0.0 GT2,GT4 M Glycosyl transferase family 2
MODELEPE_00306 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
MODELEPE_00307 1.6e-180 S Predicted membrane protein (DUF2142)
MODELEPE_00308 3.2e-200 M Glycosyltransferase like family 2
MODELEPE_00309 3.3e-36
MODELEPE_00310 1e-75 xylR GK ROK family
MODELEPE_00311 3e-167 xylB 1.1.1.57, 2.7.1.17 G Belongs to the FGGY kinase family
MODELEPE_00312 2.1e-79 G ABC-type sugar transport system periplasmic component
MODELEPE_00313 6.3e-120 G ATPases associated with a variety of cellular activities
MODELEPE_00314 2.9e-73 P branched-chain amino acid ABC transporter, permease protein
MODELEPE_00315 2e-59 G Branched-chain amino acid transport system / permease component
MODELEPE_00316 1.2e-44 5.3.1.27 G sugar phosphate isomerase involved in capsule formation
MODELEPE_00317 3e-234 glf 5.4.99.9 M UDP-galactopyranose mutase
MODELEPE_00318 2.7e-163
MODELEPE_00319 1.5e-119 S Domain of unknown function (DUF4190)
MODELEPE_00320 4e-158 fahA Q Fumarylacetoacetate (FAA) hydrolase family
MODELEPE_00321 2.5e-164 S Auxin Efflux Carrier
MODELEPE_00322 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
MODELEPE_00324 8.8e-217 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
MODELEPE_00325 5.7e-216 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
MODELEPE_00326 2.8e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
MODELEPE_00327 3.9e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
MODELEPE_00328 1.6e-49 P Binding-protein-dependent transport system inner membrane component
MODELEPE_00329 0.0 G N-terminal domain of (some) glycogen debranching enzymes
MODELEPE_00330 4.2e-131
MODELEPE_00331 3e-233 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
MODELEPE_00332 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
MODELEPE_00333 8.7e-259 S Calcineurin-like phosphoesterase
MODELEPE_00334 6.4e-140 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
MODELEPE_00335 8.4e-273 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
MODELEPE_00336 2.7e-131 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
MODELEPE_00337 8.4e-20 S Bacterial PH domain
MODELEPE_00338 1.4e-20 2.7.13.3 T Histidine kinase
MODELEPE_00339 1.8e-220 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
MODELEPE_00340 3.5e-132 yxeO 3.6.3.21 E ATPases associated with a variety of cellular activities
MODELEPE_00341 3.5e-105 S L-2-amino-thiazoline-4-carboxylic acid hydrolase
MODELEPE_00342 2.6e-138 P Binding-protein-dependent transport system inner membrane component
MODELEPE_00343 1.8e-119 ytmL P Binding-protein-dependent transport system inner membrane component
MODELEPE_00344 7.9e-157 ET Bacterial periplasmic substrate-binding proteins
MODELEPE_00345 2.6e-255 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
MODELEPE_00346 2e-255 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
MODELEPE_00347 6.1e-222 G Transmembrane secretion effector
MODELEPE_00348 8.1e-131 K Bacterial regulatory proteins, tetR family
MODELEPE_00349 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
MODELEPE_00350 1.5e-305 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
MODELEPE_00351 2.3e-55 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
MODELEPE_00352 4.3e-54 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
MODELEPE_00353 1.8e-237 hom 1.1.1.3 E Homoserine dehydrogenase
MODELEPE_00354 3.2e-185 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
MODELEPE_00355 9.3e-283 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
MODELEPE_00356 2e-91 K Acetyltransferase (GNAT) family
MODELEPE_00357 1.6e-28 S Protein of unknown function (DUF1778)
MODELEPE_00358 8.8e-139 V ATPases associated with a variety of cellular activities
MODELEPE_00359 3.7e-255 V Efflux ABC transporter, permease protein
MODELEPE_00360 1.2e-191 K Bacterial regulatory proteins, lacI family
MODELEPE_00361 1.1e-250 4.2.1.68 M Enolase C-terminal domain-like
MODELEPE_00362 2.8e-148 IQ KR domain
MODELEPE_00363 5.4e-202 fucP G Major Facilitator Superfamily
MODELEPE_00364 3.2e-149 S Amidohydrolase
MODELEPE_00365 5.7e-166 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
MODELEPE_00366 1.9e-167 mdcF S Transporter, auxin efflux carrier (AEC) family protein
MODELEPE_00367 2.8e-232 dapE 3.5.1.18 E Peptidase dimerisation domain
MODELEPE_00368 0.0 rne 3.1.26.12 J Ribonuclease E/G family
MODELEPE_00369 1.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
MODELEPE_00370 5.8e-39 rpmA J Ribosomal L27 protein
MODELEPE_00371 2.3e-311 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
MODELEPE_00372 4.1e-198 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
MODELEPE_00373 6.3e-219 G polysaccharide deacetylase
MODELEPE_00374 5.8e-230 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
MODELEPE_00376 4.7e-32 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
MODELEPE_00377 7e-110 nusG K Participates in transcription elongation, termination and antitermination
MODELEPE_00378 1e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
MODELEPE_00379 2.7e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
MODELEPE_00380 6.5e-165 QT PucR C-terminal helix-turn-helix domain
MODELEPE_00381 0.0
MODELEPE_00382 4.7e-151 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
MODELEPE_00383 2.6e-90 bioY S BioY family
MODELEPE_00384 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
MODELEPE_00385 4.5e-294 pccB I Carboxyl transferase domain
MODELEPE_00387 7.9e-14 XK27_04590 S NADPH-dependent FMN reductase
MODELEPE_00388 1.9e-17 EGP Major facilitator Superfamily
MODELEPE_00392 5.3e-52 S Alpha/beta hydrolase family
MODELEPE_00393 2.1e-22
MODELEPE_00394 8.9e-190 K Helix-turn-helix XRE-family like proteins
MODELEPE_00395 6.1e-25 yxiO G Major facilitator Superfamily
MODELEPE_00396 8.1e-54 relB L RelB antitoxin
MODELEPE_00397 2e-67 T Toxic component of a toxin-antitoxin (TA) module
MODELEPE_00398 8.5e-131 K helix_turn_helix, mercury resistance
MODELEPE_00399 2.4e-237 yxiO S Vacuole effluxer Atg22 like
MODELEPE_00400 2.7e-196 yegV G pfkB family carbohydrate kinase
MODELEPE_00401 2.5e-29 rpmB J Ribosomal L28 family
MODELEPE_00402 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
MODELEPE_00403 1.9e-101 rsmD 2.1.1.171 L Conserved hypothetical protein 95
MODELEPE_00404 1.4e-178 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
MODELEPE_00405 5.9e-304 yegQ O Peptidase family U32 C-terminal domain
MODELEPE_00406 8.8e-198 yfiH Q Multi-copper polyphenol oxidoreductase laccase
MODELEPE_00407 8.4e-151 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
MODELEPE_00408 2.6e-126 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
MODELEPE_00409 2e-43 D nuclear chromosome segregation
MODELEPE_00410 1e-267 pepC 3.4.22.40 E Peptidase C1-like family
MODELEPE_00411 4.8e-218 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
MODELEPE_00412 2.1e-235 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
MODELEPE_00413 7.4e-124 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
MODELEPE_00414 1.5e-56 EGP Sugar (and other) transporter
MODELEPE_00415 1.9e-172 EGP Sugar (and other) transporter
MODELEPE_00416 5.7e-207 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
MODELEPE_00417 3.8e-142 KT Transcriptional regulatory protein, C terminal
MODELEPE_00418 1.3e-202 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
MODELEPE_00419 1.2e-156 pstC P probably responsible for the translocation of the substrate across the membrane
MODELEPE_00420 1.3e-171 pstA P Phosphate transport system permease
MODELEPE_00421 2.1e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
MODELEPE_00422 2.4e-251 pbuO S Permease family
MODELEPE_00423 9e-147 3.2.1.8 S alpha beta
MODELEPE_00424 2.4e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
MODELEPE_00425 9.3e-49 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
MODELEPE_00426 2.6e-191 T Forkhead associated domain
MODELEPE_00427 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
MODELEPE_00428 4.8e-28 L Superfamily I DNA and RNA helicases and helicase subunits
MODELEPE_00429 2.3e-105 flgA NO SAF
MODELEPE_00430 4.3e-31 fmdB S Putative regulatory protein
MODELEPE_00431 9.5e-56 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
MODELEPE_00432 1e-114 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
MODELEPE_00433 2.9e-133
MODELEPE_00434 1.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
MODELEPE_00438 4.1e-25 rpmG J Ribosomal protein L33
MODELEPE_00439 1.9e-220 murB 1.3.1.98 M Cell wall formation
MODELEPE_00440 8e-269 E aromatic amino acid transport protein AroP K03293
MODELEPE_00441 2.9e-59 fdxA C 4Fe-4S binding domain
MODELEPE_00442 1.4e-223 dapC E Aminotransferase class I and II
MODELEPE_00443 3.1e-237 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
MODELEPE_00444 1e-21 S EamA-like transporter family
MODELEPE_00445 3.1e-64 S EamA-like transporter family
MODELEPE_00447 4.4e-21
MODELEPE_00448 1.4e-217 rbsR K helix_turn _helix lactose operon repressor
MODELEPE_00449 6.4e-243 malE G Bacterial extracellular solute-binding protein
MODELEPE_00450 1.2e-163 malC U Binding-protein-dependent transport system inner membrane component
MODELEPE_00451 6.1e-160 U Binding-protein-dependent transport system inner membrane component
MODELEPE_00452 6.3e-245 bglA 3.2.1.21 G Glycosyl hydrolase family 1
MODELEPE_00453 3.1e-117 M Bacterial capsule synthesis protein PGA_cap
MODELEPE_00454 1.4e-184 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
MODELEPE_00455 3.4e-112 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
MODELEPE_00456 8.4e-117
MODELEPE_00457 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
MODELEPE_00458 3.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
MODELEPE_00459 3.7e-82 rpsI J Belongs to the universal ribosomal protein uS9 family
MODELEPE_00460 1.2e-09 L Transposase and inactivated derivatives IS30 family
MODELEPE_00461 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
MODELEPE_00462 3.5e-224 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
MODELEPE_00463 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
MODELEPE_00464 9.5e-145 ywiC S YwiC-like protein
MODELEPE_00465 1.2e-134 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
MODELEPE_00466 8e-51 rpsJ J Involved in the binding of tRNA to the ribosomes
MODELEPE_00467 8.7e-116 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
MODELEPE_00468 3.1e-116 rplD J Forms part of the polypeptide exit tunnel
MODELEPE_00469 7.5e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
MODELEPE_00470 1.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
MODELEPE_00471 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
MODELEPE_00472 5.7e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
MODELEPE_00473 1.7e-100 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
MODELEPE_00474 2.2e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
MODELEPE_00475 4.1e-37 rpmC J Belongs to the universal ribosomal protein uL29 family
MODELEPE_00476 6.4e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
MODELEPE_00477 6.6e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
MODELEPE_00478 1.3e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
MODELEPE_00479 4.4e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
MODELEPE_00480 9.2e-18 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
MODELEPE_00481 5.5e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
MODELEPE_00482 5.4e-95 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
MODELEPE_00483 2.4e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
MODELEPE_00484 6.7e-96 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
MODELEPE_00485 7e-26 rpmD J Ribosomal protein L30p/L7e
MODELEPE_00486 8.1e-76 rplO J binds to the 23S rRNA
MODELEPE_00487 6.9e-248 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
MODELEPE_00488 2.2e-99 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
MODELEPE_00489 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
MODELEPE_00490 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
MODELEPE_00491 9.5e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
MODELEPE_00492 1.5e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
MODELEPE_00493 3.4e-183 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
MODELEPE_00494 4.4e-57 rplQ J Ribosomal protein L17
MODELEPE_00495 8.7e-170 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
MODELEPE_00496 0.0 gcs2 S A circularly permuted ATPgrasp
MODELEPE_00497 3.6e-151 E Transglutaminase/protease-like homologues
MODELEPE_00499 4.3e-31 K helix_turn _helix lactose operon repressor
MODELEPE_00500 2.2e-56 K helix_turn _helix lactose operon repressor
MODELEPE_00501 2.1e-126
MODELEPE_00502 4.4e-189 nusA K Participates in both transcription termination and antitermination
MODELEPE_00503 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
MODELEPE_00504 4.8e-82 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
MODELEPE_00505 5e-218 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
MODELEPE_00506 4.3e-219 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
MODELEPE_00507 5e-263 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
MODELEPE_00508 3e-97
MODELEPE_00510 9.1e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
MODELEPE_00511 3.9e-172 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
MODELEPE_00512 9.4e-278 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MODELEPE_00513 3.6e-73 K Transcriptional regulator
MODELEPE_00514 4e-198 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
MODELEPE_00515 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
MODELEPE_00516 0.0 crr 2.7.1.193 G pts system, glucose-specific IIABC component
MODELEPE_00517 1.3e-162 arbG K CAT RNA binding domain
MODELEPE_00518 1e-176 I Diacylglycerol kinase catalytic domain
MODELEPE_00519 4.8e-241 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
MODELEPE_00521 1.2e-249 G Bacterial extracellular solute-binding protein
MODELEPE_00522 6.9e-173 malC G Binding-protein-dependent transport system inner membrane component
MODELEPE_00523 2.5e-167 G ABC transporter permease
MODELEPE_00524 0.0 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
MODELEPE_00525 2.6e-205 mdsC 2.7.1.162, 2.7.1.39 S Phosphotransferase enzyme family
MODELEPE_00526 4.1e-168 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
MODELEPE_00527 2.9e-117 degU K helix_turn_helix, Lux Regulon
MODELEPE_00528 1.2e-236 tcsS3 KT PspC domain
MODELEPE_00529 2.6e-284 pspC KT PspC domain
MODELEPE_00530 5.4e-58
MODELEPE_00531 0.0 S alpha beta
MODELEPE_00532 1.5e-115 S Protein of unknown function (DUF4125)
MODELEPE_00533 0.0 S Domain of unknown function (DUF4037)
MODELEPE_00534 1.3e-218 araJ EGP Major facilitator Superfamily
MODELEPE_00536 2.3e-311 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
MODELEPE_00537 4.7e-174 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
MODELEPE_00538 1.1e-138 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
MODELEPE_00539 5.4e-116 phoU P Plays a role in the regulation of phosphate uptake
MODELEPE_00540 5.8e-174 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
MODELEPE_00541 1.8e-32
MODELEPE_00542 3.9e-212 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
MODELEPE_00543 1.7e-168 usp 3.5.1.28 CBM50 S CHAP domain
MODELEPE_00544 1.4e-101 M NlpC/P60 family
MODELEPE_00545 1.5e-103 M NlpC/P60 family
MODELEPE_00546 3.6e-188 T Universal stress protein family
MODELEPE_00547 3.4e-73 attW O OsmC-like protein
MODELEPE_00548 7.8e-168 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
MODELEPE_00549 1.3e-127 folA 1.5.1.3 H dihydrofolate reductase
MODELEPE_00550 1.5e-97 ptpA 3.1.3.48 T low molecular weight
MODELEPE_00551 5.4e-110 vex2 V ABC transporter, ATP-binding protein
MODELEPE_00552 2e-209 vex1 V Efflux ABC transporter, permease protein
MODELEPE_00553 8.9e-219 vex3 V ABC transporter permease
MODELEPE_00554 6.7e-08 L HTH-like domain
MODELEPE_00555 0.0 G Glycosyl hydrolase family 20, domain 2
MODELEPE_00556 6e-08 U Binding-protein-dependent transport system inner membrane component
MODELEPE_00557 1.8e-215 GK ROK family
MODELEPE_00558 1.2e-244 L Integrase core domain
MODELEPE_00559 5e-235 rfbP 2.7.8.6 M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
MODELEPE_00560 5.3e-307 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
MODELEPE_00561 2.2e-277 EGP Major facilitator Superfamily
MODELEPE_00562 3.9e-235 mntH P H( )-stimulated, divalent metal cation uptake system
MODELEPE_00563 7.1e-141 L Protein of unknown function (DUF1524)
MODELEPE_00564 2.5e-87 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
MODELEPE_00565 1.5e-189 K helix_turn _helix lactose operon repressor
MODELEPE_00566 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
MODELEPE_00567 1.4e-101 malC G Binding-protein-dependent transport system inner membrane component
MODELEPE_00568 1.6e-260 G Bacterial extracellular solute-binding protein
MODELEPE_00569 0.0 cydD V ABC transporter transmembrane region
MODELEPE_00570 4.2e-19 araE EGP Major facilitator Superfamily
MODELEPE_00571 1.7e-38 araE EGP Major facilitator Superfamily
MODELEPE_00572 0.0 fadD 6.2.1.3 I AMP-binding enzyme
MODELEPE_00573 2.5e-13 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
MODELEPE_00574 2.1e-210 K helix_turn _helix lactose operon repressor
MODELEPE_00575 1.6e-157 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
MODELEPE_00576 3.8e-165 lepB 3.4.21.89 U Belongs to the peptidase S26 family
MODELEPE_00577 1.5e-59 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
MODELEPE_00578 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
MODELEPE_00579 2.2e-171 L Transposase and inactivated derivatives IS30 family
MODELEPE_00580 2.8e-88 L Transposase and inactivated derivatives IS30 family
MODELEPE_00581 9e-58 L Transposase
MODELEPE_00582 3.6e-148 L IstB-like ATP binding protein
MODELEPE_00583 9.8e-296 L PFAM Integrase catalytic
MODELEPE_00584 2.3e-88 L Transposase and inactivated derivatives IS30 family
MODELEPE_00585 2.7e-120 V ATPases associated with a variety of cellular activities
MODELEPE_00586 5e-128
MODELEPE_00587 4.7e-98
MODELEPE_00588 4.5e-147 S EamA-like transporter family
MODELEPE_00589 1.4e-62
MODELEPE_00590 2e-70
MODELEPE_00591 1.3e-162 yfiL V ATPases associated with a variety of cellular activities
MODELEPE_00592 7.1e-136
MODELEPE_00593 2.1e-106
MODELEPE_00594 9.4e-22 S Psort location CytoplasmicMembrane, score
MODELEPE_00595 4e-93 rpoE4 K Sigma-70 region 2
MODELEPE_00596 3.3e-60 2.7.13.3 T Histidine kinase
MODELEPE_00597 3.8e-50 S Bacterial toxin of type II toxin-antitoxin system, YafQ
MODELEPE_00598 3.2e-40 relB L RelB antitoxin
MODELEPE_00599 8.8e-175 V MacB-like periplasmic core domain
MODELEPE_00600 1.4e-124 lolD Q ATPases associated with a variety of cellular activities
MODELEPE_00601 2.8e-144 M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
MODELEPE_00602 9.8e-94
MODELEPE_00603 5.3e-127 K helix_turn_helix, Lux Regulon
MODELEPE_00604 1.1e-193 2.7.13.3 T Histidine kinase
MODELEPE_00605 2e-35 2.7.13.3 T Histidine kinase
MODELEPE_00608 5.2e-121
MODELEPE_00609 3.3e-50
MODELEPE_00610 1.6e-99 S Acetyltransferase (GNAT) domain
MODELEPE_00611 1.8e-65 cefD 5.1.1.17 E Aminotransferase, class V
MODELEPE_00612 5.5e-189 V VanZ like family
MODELEPE_00613 1.9e-50 EGP Major facilitator Superfamily
MODELEPE_00614 1.1e-259 mmuP E amino acid
MODELEPE_00615 1.4e-156 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
MODELEPE_00616 3.2e-132 S SOS response associated peptidase (SRAP)
MODELEPE_00617 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
MODELEPE_00618 3.2e-161 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
MODELEPE_00619 1.5e-185 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
MODELEPE_00620 9.4e-113 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
MODELEPE_00621 1.3e-41 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
MODELEPE_00622 7.9e-157 hisG 2.4.2.17 F ATP phosphoribosyltransferase
MODELEPE_00623 1.2e-106 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
MODELEPE_00624 4.6e-169 S Bacterial protein of unknown function (DUF881)
MODELEPE_00625 3.9e-35 sbp S Protein of unknown function (DUF1290)
MODELEPE_00626 8.5e-140 S Bacterial protein of unknown function (DUF881)
MODELEPE_00627 6.7e-75 garA T Inner membrane component of T3SS, cytoplasmic domain
MODELEPE_00628 2.6e-112 K helix_turn_helix, mercury resistance
MODELEPE_00629 3.8e-64
MODELEPE_00630 6.9e-36
MODELEPE_00631 2.8e-139 pgp 3.1.3.18 S HAD-hyrolase-like
MODELEPE_00632 5.1e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
MODELEPE_00633 0.0 helY L DEAD DEAH box helicase
MODELEPE_00634 6.8e-53
MODELEPE_00635 0.0 pafB K WYL domain
MODELEPE_00636 2.4e-294 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
MODELEPE_00637 2.5e-163 supH S Sucrose-6F-phosphate phosphohydrolase
MODELEPE_00639 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
MODELEPE_00640 1.2e-143 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
MODELEPE_00641 8.5e-120 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
MODELEPE_00642 2.2e-24
MODELEPE_00643 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
MODELEPE_00644 6e-236
MODELEPE_00645 2.9e-165 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
MODELEPE_00646 3.1e-223 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
MODELEPE_00647 6.1e-100 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
MODELEPE_00648 1.2e-52 yajC U Preprotein translocase subunit
MODELEPE_00649 9.4e-200 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
MODELEPE_00650 3.2e-107 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
MODELEPE_00651 2.7e-100 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
MODELEPE_00652 2e-111 yebC K transcriptional regulatory protein
MODELEPE_00653 8.5e-110 hit 2.7.7.53 FG HIT domain
MODELEPE_00654 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
MODELEPE_00660 1.2e-133 S PAC2 family
MODELEPE_00661 1.8e-156 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
MODELEPE_00662 9.6e-157 G Fructosamine kinase
MODELEPE_00663 1.5e-211 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
MODELEPE_00664 1.1e-190 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
MODELEPE_00665 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
MODELEPE_00666 3.6e-202 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
MODELEPE_00667 2.7e-236 brnQ U Component of the transport system for branched-chain amino acids
MODELEPE_00668 7.8e-187
MODELEPE_00669 4.7e-301 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
MODELEPE_00670 2.9e-159 S Sucrose-6F-phosphate phosphohydrolase
MODELEPE_00671 1e-176 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
MODELEPE_00672 2.5e-34 secG U Preprotein translocase SecG subunit
MODELEPE_00673 3.5e-146 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
MODELEPE_00674 1.3e-218 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
MODELEPE_00675 3.5e-169 whiA K May be required for sporulation
MODELEPE_00676 1.1e-178 rapZ S Displays ATPase and GTPase activities
MODELEPE_00677 2.8e-190 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
MODELEPE_00678 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
MODELEPE_00679 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
MODELEPE_00680 4.7e-232 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
MODELEPE_00681 5.3e-91 XK27_08585 S Hypothetical bacterial integral membrane protein (Trep_Strep)
MODELEPE_00682 1.4e-26 P ABC transporter
MODELEPE_00683 8.3e-24 P ABC transporter
MODELEPE_00684 5.2e-56 P ABC transporter
MODELEPE_00685 5.2e-130 S Enoyl-(Acyl carrier protein) reductase
MODELEPE_00686 3.7e-301 ybiT S ABC transporter
MODELEPE_00687 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
MODELEPE_00688 9.4e-123 3.8.1.2 S Haloacid dehalogenase-like hydrolase
MODELEPE_00689 9.4e-172 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
MODELEPE_00690 3.6e-218 MA20_36090 S Psort location Cytoplasmic, score 8.87
MODELEPE_00691 3.4e-28
MODELEPE_00692 5e-125 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
MODELEPE_00693 3.1e-181 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
MODELEPE_00694 6.9e-158 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
MODELEPE_00695 9.4e-175 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
MODELEPE_00696 7.4e-291 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
MODELEPE_00697 7e-74 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
MODELEPE_00698 8.3e-179 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
MODELEPE_00699 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
MODELEPE_00700 1.7e-187 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
MODELEPE_00701 1.6e-162 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
MODELEPE_00702 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
MODELEPE_00704 2.4e-98 sixA 3.6.1.55 T Phosphoglycerate mutase family
MODELEPE_00705 2.3e-201 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
MODELEPE_00706 1.7e-133 S Phospholipase/Carboxylesterase
MODELEPE_00708 2e-140 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
MODELEPE_00709 7.2e-146 S phosphoesterase or phosphohydrolase
MODELEPE_00710 4.2e-89 S Appr-1'-p processing enzyme
MODELEPE_00711 8.9e-178 I alpha/beta hydrolase fold
MODELEPE_00713 2.5e-129
MODELEPE_00714 1.7e-127 S Plasmid pRiA4b ORF-3-like protein
MODELEPE_00715 2.3e-88 L Transposase and inactivated derivatives IS30 family
MODELEPE_00716 1.2e-08 yccF S Inner membrane component domain
MODELEPE_00717 1.4e-256 S Psort location CytoplasmicMembrane, score 9.99
MODELEPE_00718 5.2e-104
MODELEPE_00719 2.9e-82 L IstB-like ATP binding protein
MODELEPE_00720 7.1e-138 L PFAM Integrase catalytic
MODELEPE_00721 1.4e-305 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
MODELEPE_00722 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
MODELEPE_00723 1e-190 K helix_turn _helix lactose operon repressor
MODELEPE_00725 7.4e-255 hemN H Involved in the biosynthesis of porphyrin-containing compound
MODELEPE_00726 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
MODELEPE_00727 5.8e-34 rpsT J Binds directly to 16S ribosomal RNA
MODELEPE_00728 3.3e-138 S UPF0126 domain
MODELEPE_00729 8.8e-143 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
MODELEPE_00730 1.6e-226 ilvE 2.6.1.42 E Amino-transferase class IV
MODELEPE_00731 1.7e-103 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
MODELEPE_00732 5.4e-234 yhjX EGP Major facilitator Superfamily
MODELEPE_00733 1.5e-232 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
MODELEPE_00734 2.1e-43 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
MODELEPE_00735 1.5e-203 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
MODELEPE_00736 0.0 fadD 6.2.1.3 I AMP-binding enzyme
MODELEPE_00737 8.1e-185 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
MODELEPE_00738 1.5e-248 corC S CBS domain
MODELEPE_00739 1.2e-100 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
MODELEPE_00740 2.5e-217 phoH T PhoH-like protein
MODELEPE_00741 4.4e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
MODELEPE_00742 4.6e-141 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
MODELEPE_00744 9.6e-166 spoU 2.1.1.185 J SpoU rRNA Methylase family
MODELEPE_00745 6.2e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
MODELEPE_00746 3.2e-109 yitW S Iron-sulfur cluster assembly protein
MODELEPE_00747 8.1e-102 iscU C SUF system FeS assembly protein, NifU family
MODELEPE_00748 1.1e-239 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
MODELEPE_00749 7e-144 sufC O FeS assembly ATPase SufC
MODELEPE_00750 4.3e-236 sufD O FeS assembly protein SufD
MODELEPE_00751 4.3e-291 sufB O FeS assembly protein SufB
MODELEPE_00752 0.0 S L,D-transpeptidase catalytic domain
MODELEPE_00753 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
MODELEPE_00754 1.3e-78 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
MODELEPE_00755 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
MODELEPE_00756 2.5e-217 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
MODELEPE_00757 3.1e-70 3.4.23.43 S Type IV leader peptidase family
MODELEPE_00758 5.1e-194 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
MODELEPE_00759 2.7e-71 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
MODELEPE_00760 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
MODELEPE_00761 1.6e-35
MODELEPE_00762 2.3e-55 WQ51_05790 S Bacterial protein of unknown function (DUF948)
MODELEPE_00763 1.9e-129 pgm3 G Phosphoglycerate mutase family
MODELEPE_00764 1.2e-48 relB L RelB antitoxin
MODELEPE_00765 7.1e-67 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
MODELEPE_00766 6.1e-111 E Transglutaminase-like superfamily
MODELEPE_00767 7.6e-45 sdpI S SdpI/YhfL protein family
MODELEPE_00768 2.5e-91 3.5.4.5 F cytidine deaminase activity
MODELEPE_00769 2.2e-88 L Transposase and inactivated derivatives IS30 family
MODELEPE_00770 2.4e-50 L Transposase and inactivated derivatives IS30 family
MODELEPE_00771 4e-40 L Transposase
MODELEPE_00772 3e-276 cycA E Amino acid permease
MODELEPE_00773 0.0 V FtsX-like permease family
MODELEPE_00774 9.8e-129 V ABC transporter
MODELEPE_00775 4.5e-269 aroP E aromatic amino acid transport protein AroP K03293
MODELEPE_00776 2.2e-105 S Protein of unknown function, DUF624
MODELEPE_00777 6.8e-153 rafG G ABC transporter permease
MODELEPE_00778 4.4e-147 malC G Binding-protein-dependent transport system inner membrane component
MODELEPE_00779 5.3e-184 K Psort location Cytoplasmic, score
MODELEPE_00780 3.8e-251 amyE G Bacterial extracellular solute-binding protein
MODELEPE_00781 3.6e-102 G Phosphoglycerate mutase family
MODELEPE_00782 4.4e-59 S Protein of unknown function (DUF4235)
MODELEPE_00783 6.7e-139 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
MODELEPE_00784 0.0 pip S YhgE Pip domain protein
MODELEPE_00785 7.2e-277 pip S YhgE Pip domain protein
MODELEPE_00786 2.6e-39
MODELEPE_00788 7.4e-25
MODELEPE_00789 6.6e-67 L Transposase and inactivated derivatives IS30 family
MODELEPE_00790 3.6e-148 L IstB-like ATP binding protein
MODELEPE_00791 9.8e-296 L PFAM Integrase catalytic
MODELEPE_00792 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
MODELEPE_00793 1.1e-71 I Sterol carrier protein
MODELEPE_00794 4e-34 S Protein of unknown function (DUF3073)
MODELEPE_00795 5.5e-203 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
MODELEPE_00796 1.9e-305 S Amidohydrolase family
MODELEPE_00797 4.9e-166 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
MODELEPE_00798 2.3e-298 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
MODELEPE_00799 0.0 yjjP S Threonine/Serine exporter, ThrE
MODELEPE_00800 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
MODELEPE_00802 1.7e-309 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
MODELEPE_00803 2.3e-32 K helix_turn _helix lactose operon repressor
MODELEPE_00804 6e-80 S AAA domain
MODELEPE_00805 0.0 yliE T Putative diguanylate phosphodiesterase
MODELEPE_00806 1.9e-32 yliE T Putative diguanylate phosphodiesterase
MODELEPE_00807 8.5e-111 S Domain of unknown function (DUF4956)
MODELEPE_00808 4.1e-158 P VTC domain
MODELEPE_00809 0.0 cotH M CotH kinase protein
MODELEPE_00810 1.4e-281 pelG S Putative exopolysaccharide Exporter (EPS-E)
MODELEPE_00811 1.6e-279 pelF GT4 M Domain of unknown function (DUF3492)
MODELEPE_00812 0.0 S Uncharacterised protein conserved in bacteria (DUF2194)
MODELEPE_00813 3e-162
MODELEPE_00814 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
MODELEPE_00815 4.1e-270 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
MODELEPE_00816 2.8e-243 nagA 3.5.1.25 G Amidohydrolase family
MODELEPE_00817 1.9e-147 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
MODELEPE_00818 8.7e-176 2.7.1.2 GK ROK family
MODELEPE_00819 7e-220 GK ROK family
MODELEPE_00820 6.4e-159 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
MODELEPE_00821 7.5e-253 gtr U Sugar (and other) transporter
MODELEPE_00822 0.0 P Domain of unknown function (DUF4976)
MODELEPE_00823 2e-271 aslB C Iron-sulfur cluster-binding domain
MODELEPE_00824 3.2e-107 S Sulfite exporter TauE/SafE
MODELEPE_00825 2.9e-57 L Helix-turn-helix domain
MODELEPE_00826 8.9e-94 S Sulfite exporter TauE/SafE
MODELEPE_00827 1.7e-63 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
MODELEPE_00828 1.3e-238 EGP Major facilitator Superfamily
MODELEPE_00829 1.6e-108 3.1.3.27 E haloacid dehalogenase-like hydrolase
MODELEPE_00830 4.7e-162 3.1.3.73 G Phosphoglycerate mutase family
MODELEPE_00831 1.1e-234 rutG F Permease family
MODELEPE_00832 0.0 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
MODELEPE_00833 8.4e-259 nplT G Alpha amylase, catalytic domain
MODELEPE_00834 2.2e-188 pit P Phosphate transporter family
MODELEPE_00835 2.1e-114 MA20_27875 P Protein of unknown function DUF47
MODELEPE_00836 8.3e-114 K helix_turn_helix, Lux Regulon
MODELEPE_00837 9.3e-245 T Histidine kinase
MODELEPE_00838 1.3e-120 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
MODELEPE_00839 1.3e-187 V ATPases associated with a variety of cellular activities
MODELEPE_00840 1.5e-225 V ABC-2 family transporter protein
MODELEPE_00841 1.6e-255 V ABC-2 family transporter protein
MODELEPE_00842 1.2e-285 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
MODELEPE_00843 1.5e-39 E GDSL-like Lipase/Acylhydrolase family
MODELEPE_00844 4e-194
MODELEPE_00845 5.3e-110 3.4.13.21 E Peptidase family S51
MODELEPE_00846 1e-105 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
MODELEPE_00847 2.6e-161 M pfam nlp p60
MODELEPE_00848 7.4e-160 I Serine aminopeptidase, S33
MODELEPE_00849 1.1e-40 S Protein of unknown function (DUF2975)
MODELEPE_00850 2.8e-31 yozG K Cro/C1-type HTH DNA-binding domain
MODELEPE_00851 8.8e-243 pbuX F Permease family
MODELEPE_00852 1.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
MODELEPE_00853 0.0 pcrA 3.6.4.12 L DNA helicase
MODELEPE_00854 3.4e-62 S Domain of unknown function (DUF4418)
MODELEPE_00855 2.2e-216 V FtsX-like permease family
MODELEPE_00856 2.5e-161 lolD V ABC transporter
MODELEPE_00857 1.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
MODELEPE_00858 5.8e-154 S Peptidase C26
MODELEPE_00859 2.4e-50 L Transposase and inactivated derivatives IS30 family
MODELEPE_00860 2.1e-263 abcT3 P ATPases associated with a variety of cellular activities
MODELEPE_00861 0.0 pgi 5.3.1.9 G Belongs to the GPI family
MODELEPE_00864 3.6e-177 S Auxin Efflux Carrier
MODELEPE_00865 2.2e-137 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
MODELEPE_00866 7e-144 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
MODELEPE_00867 8e-249 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
MODELEPE_00868 3.7e-119
MODELEPE_00869 6.3e-78 soxR K MerR, DNA binding
MODELEPE_00870 3e-195 yghZ C Aldo/keto reductase family
MODELEPE_00871 2.4e-49 S Protein of unknown function (DUF3039)
MODELEPE_00872 6e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
MODELEPE_00873 7.9e-87
MODELEPE_00874 7.6e-117 yceD S Uncharacterized ACR, COG1399
MODELEPE_00875 9.3e-21 rpmF J Belongs to the bacterial ribosomal protein bL32 family
MODELEPE_00876 9.7e-135 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
MODELEPE_00877 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
MODELEPE_00878 9e-93 ilvN 2.2.1.6 E ACT domain
MODELEPE_00879 3.9e-44 stbC S Plasmid stability protein
MODELEPE_00880 3.9e-72 vapC S Toxic component of a toxin-antitoxin (TA) module. An RNase
MODELEPE_00881 0.0 yjjK S ABC transporter
MODELEPE_00882 6.4e-103 dam 2.1.1.72 H D12 class N6 adenine-specific DNA methyltransferase
MODELEPE_00883 1.8e-112
MODELEPE_00885 2e-136 guaA1 6.3.5.2 F Peptidase C26
MODELEPE_00886 0.0 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
MODELEPE_00887 2.3e-162 P Cation efflux family
MODELEPE_00888 2.3e-269 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
MODELEPE_00889 8.4e-206 S Endonuclease/Exonuclease/phosphatase family
MODELEPE_00890 7e-62 rpsP J Belongs to the bacterial ribosomal protein bS16 family
MODELEPE_00891 1e-34 CP_0960 S Belongs to the UPF0109 family
MODELEPE_00892 2.2e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
MODELEPE_00893 2.5e-200 iunH1 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
MODELEPE_00894 2.4e-169 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
MODELEPE_00895 1.5e-19
MODELEPE_00896 7.7e-86 S Predicted membrane protein (DUF2207)
MODELEPE_00897 1.8e-102 S Predicted membrane protein (DUF2207)
MODELEPE_00898 3.1e-08 S Predicted membrane protein (DUF2207)
MODELEPE_00899 0.0 S Predicted membrane protein (DUF2207)
MODELEPE_00900 1.3e-89 lemA S LemA family
MODELEPE_00901 1.1e-31 macB_7 V FtsX-like permease family
MODELEPE_00902 4.2e-119 V ABC transporter, ATP-binding protein
MODELEPE_00903 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
MODELEPE_00904 1e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
MODELEPE_00905 7.6e-110
MODELEPE_00906 1.7e-18
MODELEPE_00907 1.5e-278 M LPXTG cell wall anchor motif
MODELEPE_00908 9.5e-206 Q von Willebrand factor (vWF) type A domain
MODELEPE_00909 2.8e-81
MODELEPE_00912 3.7e-112 P Sodium/hydrogen exchanger family
MODELEPE_00913 2.7e-82 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
MODELEPE_00914 3.6e-85 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
MODELEPE_00915 6.4e-254 MA20_36090 S Psort location Cytoplasmic, score 8.87
MODELEPE_00916 1.3e-106 K Bacterial regulatory proteins, tetR family
MODELEPE_00917 3e-41 L Transposase, Mutator family
MODELEPE_00918 2.2e-237 S AAA domain
MODELEPE_00919 1.6e-177 P Binding-protein-dependent transport system inner membrane component
MODELEPE_00920 8.4e-165 malC P Binding-protein-dependent transport system inner membrane component
MODELEPE_00921 4.1e-264 G Bacterial extracellular solute-binding protein
MODELEPE_00922 2.1e-306 Z012_09690 P Domain of unknown function (DUF4976)
MODELEPE_00923 3.8e-193 K helix_turn _helix lactose operon repressor
MODELEPE_00924 2.8e-262 aslB C Iron-sulfur cluster-binding domain
MODELEPE_00925 5.7e-133 S Sulfite exporter TauE/SafE
MODELEPE_00926 9.3e-11 L Transposase DDE domain
MODELEPE_00927 8.6e-273 aspA 4.3.1.1 E Fumarase C C-terminus
MODELEPE_00928 2.3e-137 M Mechanosensitive ion channel
MODELEPE_00929 1.1e-184 S CAAX protease self-immunity
MODELEPE_00930 8.2e-238 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
MODELEPE_00931 6.9e-151 U Binding-protein-dependent transport system inner membrane component
MODELEPE_00932 2.9e-160 U Binding-protein-dependent transport system inner membrane component
MODELEPE_00933 9.9e-219 P Bacterial extracellular solute-binding protein
MODELEPE_00934 2.8e-229 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
MODELEPE_00935 2.7e-180 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
MODELEPE_00936 8.8e-189 plsC2 2.3.1.51 I Phosphate acyltransferases
MODELEPE_00937 1.4e-63 psp1 3.5.99.10 J Endoribonuclease L-PSP
MODELEPE_00940 6.9e-118 cyaA 4.6.1.1 S CYTH
MODELEPE_00941 1.1e-170 trxA2 O Tetratricopeptide repeat
MODELEPE_00942 7.8e-180
MODELEPE_00943 4e-186
MODELEPE_00944 9.4e-159 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
MODELEPE_00945 1.4e-130 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
MODELEPE_00946 3.6e-48 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
MODELEPE_00947 2.1e-282 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
MODELEPE_00948 5.5e-164 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
MODELEPE_00949 1.3e-309 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
MODELEPE_00950 1.1e-150 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
MODELEPE_00951 1.4e-63 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
MODELEPE_00952 4.4e-30 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
MODELEPE_00953 6.4e-148 atpB C it plays a direct role in the translocation of protons across the membrane
MODELEPE_00954 1.6e-207 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
MODELEPE_00956 0.0 K RNA polymerase II activating transcription factor binding
MODELEPE_00957 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
MODELEPE_00958 4e-92 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
MODELEPE_00959 1.3e-97 mntP P Probably functions as a manganese efflux pump
MODELEPE_00960 4.6e-118
MODELEPE_00961 6.9e-139 KT Transcriptional regulatory protein, C terminal
MODELEPE_00962 1.3e-125 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
MODELEPE_00963 1.2e-280 E Bacterial extracellular solute-binding proteins, family 5 Middle
MODELEPE_00964 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
MODELEPE_00965 0.0 S domain protein
MODELEPE_00966 6.8e-63 tyrA 5.4.99.5 E Chorismate mutase type II
MODELEPE_00967 1.4e-131 rafA 3.2.1.22 G alpha-galactosidase
MODELEPE_00968 1.3e-114 araQ U Binding-protein-dependent transport system inner membrane component
MODELEPE_00969 9.5e-121 lacF P Binding-protein-dependent transport system inner membrane component
MODELEPE_00970 2.6e-154 araN G Bacterial extracellular solute-binding protein
MODELEPE_00971 5.1e-50 K helix_turn_helix, arabinose operon control protein
MODELEPE_00972 1.1e-23 L Transposase
MODELEPE_00973 2.6e-48 L Transposase
MODELEPE_00974 6.9e-45 pabC 2.6.1.42, 4.1.3.38 EH Amino-transferase class IV
MODELEPE_00975 2.7e-293 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
MODELEPE_00976 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
MODELEPE_00977 3.3e-52 S Protein of unknown function (DUF2469)
MODELEPE_00978 1.1e-195 2.3.1.57 J Acetyltransferase (GNAT) domain
MODELEPE_00979 7.4e-283 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
MODELEPE_00980 1.2e-285 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
MODELEPE_00981 2.4e-47 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
MODELEPE_00982 8.7e-161 K Psort location Cytoplasmic, score
MODELEPE_00983 2.6e-178
MODELEPE_00984 6.4e-168 V ABC transporter
MODELEPE_00985 6.9e-170 spoU 2.1.1.185 J RNA methyltransferase TrmH family
MODELEPE_00986 3.7e-111 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
MODELEPE_00987 1.6e-210 rmuC S RmuC family
MODELEPE_00988 3.3e-43 csoR S Metal-sensitive transcriptional repressor
MODELEPE_00989 0.0 pacS 1.9.3.1, 3.6.3.54 P E1-E2 ATPase
MODELEPE_00990 1.9e-130 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
MODELEPE_00991 2.8e-128 xerH L Belongs to the 'phage' integrase family
MODELEPE_00992 8.6e-60
MODELEPE_00993 6.2e-43
MODELEPE_00994 6e-189 EGP Major Facilitator Superfamily
MODELEPE_00995 6.5e-210 2.7.13.3 T Histidine kinase
MODELEPE_00996 3.7e-111 K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
MODELEPE_00997 3.1e-130 V ABC transporter
MODELEPE_00998 1.9e-116
MODELEPE_00999 8.9e-159 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
MODELEPE_01002 8.6e-70 rplI J Binds to the 23S rRNA
MODELEPE_01003 2e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
MODELEPE_01004 6.8e-76 ssb1 L Single-stranded DNA-binding protein
MODELEPE_01005 4.6e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
MODELEPE_01006 1.3e-187 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
MODELEPE_01007 7e-156 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
MODELEPE_01008 5e-193 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
MODELEPE_01009 3.2e-07 K Periplasmic binding protein domain
MODELEPE_01010 0.0 ubiB S ABC1 family
MODELEPE_01011 4.6e-37 S granule-associated protein
MODELEPE_01012 2.4e-141 cobQ S CobB/CobQ-like glutamine amidotransferase domain
MODELEPE_01013 5.2e-246 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
MODELEPE_01014 2.1e-256 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
MODELEPE_01015 1.3e-238 dinF V MatE
MODELEPE_01016 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
MODELEPE_01017 1e-54 glnB K Nitrogen regulatory protein P-II
MODELEPE_01018 2.2e-227 amt U Ammonium Transporter Family
MODELEPE_01019 1.3e-168 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
MODELEPE_01020 1.7e-151 icaR K Bacterial regulatory proteins, tetR family
MODELEPE_01021 1.1e-197 XK27_01805 M Glycosyltransferase like family 2
MODELEPE_01022 8.8e-300 pepD E Peptidase family C69
MODELEPE_01024 4.5e-290 3.5.2.6 V Beta-lactamase enzyme family
MODELEPE_01025 2.3e-303 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
MODELEPE_01026 3.7e-193 opcA G Glucose-6-phosphate dehydrogenase subunit
MODELEPE_01027 1.3e-140 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
MODELEPE_01028 1.5e-272 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
MODELEPE_01029 2.5e-253 S Putative ABC-transporter type IV
MODELEPE_01030 0.0 pip S YhgE Pip domain protein
MODELEPE_01031 3.4e-305 pip S YhgE Pip domain protein
MODELEPE_01032 9.2e-101 K Psort location Cytoplasmic, score 8.87
MODELEPE_01033 1.7e-67 S FMN_bind
MODELEPE_01034 4.5e-146 macB V ABC transporter, ATP-binding protein
MODELEPE_01035 2.1e-199 Z012_06715 V FtsX-like permease family
MODELEPE_01036 7e-221 macB_2 V ABC transporter permease
MODELEPE_01037 7.7e-233 S Predicted membrane protein (DUF2318)
MODELEPE_01038 2.8e-99 tpd P Fe2+ transport protein
MODELEPE_01039 0.0 efeU_1 P Iron permease FTR1 family
MODELEPE_01041 4.1e-282 L Phage integrase, N-terminal SAM-like domain
MODELEPE_01042 1.8e-27
MODELEPE_01043 0.0 T AAA domain
MODELEPE_01044 9.3e-283 S FRG domain
MODELEPE_01045 6.7e-231 dcm 2.1.1.37 L Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
MODELEPE_01046 1.7e-173 S Domain of unknown function (DUF4928)
MODELEPE_01047 9.6e-136 tnp7109-21 L Integrase core domain
MODELEPE_01048 6.2e-46 L Transposase
MODELEPE_01050 5.4e-152 L HNH endonuclease
MODELEPE_01051 2e-166
MODELEPE_01052 2.6e-91
MODELEPE_01053 1.5e-19 2.3.1.1 K Psort location Cytoplasmic, score 8.87
MODELEPE_01054 2.5e-110 pptA 6.3.2.14 Q 4'-phosphopantetheinyl transferase superfamily
MODELEPE_01055 2.8e-114 K WHG domain
MODELEPE_01056 2.4e-49 H Beta-ketoacyl synthase, C-terminal domain
MODELEPE_01057 5.5e-17 L Psort location Cytoplasmic, score 8.87
MODELEPE_01058 1.6e-264 EGP Major Facilitator Superfamily
MODELEPE_01059 6.8e-306 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
MODELEPE_01060 1.2e-79 XK27_10430 S NAD(P)H-binding
MODELEPE_01061 2e-55 ydeP K HxlR-like helix-turn-helix
MODELEPE_01062 2.5e-134 yoaK S Protein of unknown function (DUF1275)
MODELEPE_01063 4.7e-69
MODELEPE_01066 4.4e-291 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
MODELEPE_01068 8.4e-153 S Protein of unknown function (DUF805)
MODELEPE_01069 2.4e-228 3.1.1.31 G Lactonase, 7-bladed beta-propeller
MODELEPE_01070 1.1e-117
MODELEPE_01071 7.5e-123 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
MODELEPE_01072 9.7e-248 EGP Major facilitator Superfamily
MODELEPE_01073 8.4e-96 S GtrA-like protein
MODELEPE_01074 3.3e-61 S Macrophage migration inhibitory factor (MIF)
MODELEPE_01075 1.8e-289 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
MODELEPE_01076 0.0 pepD E Peptidase family C69
MODELEPE_01077 2.5e-106 S Phosphatidylethanolamine-binding protein
MODELEPE_01078 3e-19 D nuclear chromosome segregation
MODELEPE_01079 6.5e-31 3.4.17.14 M domain, Protein
MODELEPE_01080 7.8e-294 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
MODELEPE_01082 3.3e-37 ptsH G PTS HPr component phosphorylation site
MODELEPE_01083 2.3e-105 K helix_turn _helix lactose operon repressor
MODELEPE_01084 2.3e-207 holB 2.7.7.7 L DNA polymerase III
MODELEPE_01085 1e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
MODELEPE_01086 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
MODELEPE_01087 3.7e-170 3.6.1.27 I PAP2 superfamily
MODELEPE_01088 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
MODELEPE_01089 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
MODELEPE_01090 2.8e-271 S Calcineurin-like phosphoesterase
MODELEPE_01091 9e-153 K FCD
MODELEPE_01092 1.4e-242 P Domain of unknown function (DUF4143)
MODELEPE_01093 0.0 nanI 3.2.1.18 GH33 G BNR repeat-like domain
MODELEPE_01094 9.1e-14 nagA 3.5.1.25 G Amidohydrolase family
MODELEPE_01095 1.9e-147 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
MODELEPE_01096 7.2e-178 nanL 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
MODELEPE_01097 1.7e-148 oppF E ATPases associated with a variety of cellular activities
MODELEPE_01098 0.0 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
MODELEPE_01099 4.6e-153 oppB6 EP Binding-protein-dependent transport system inner membrane component
MODELEPE_01100 2.3e-303 E Bacterial extracellular solute-binding proteins, family 5 Middle
MODELEPE_01101 3e-161 3.5.1.106 I carboxylic ester hydrolase activity
MODELEPE_01102 1.4e-124 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
MODELEPE_01103 2.8e-169 2.7.1.2 GK ROK family
MODELEPE_01104 9.3e-172 L Domain of unknown function (DUF4862)
MODELEPE_01105 9.6e-112
MODELEPE_01106 9e-214 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
MODELEPE_01107 2.7e-97 askB 1.1.1.3, 2.7.2.4 E ACT domain
MODELEPE_01108 1.3e-134 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
MODELEPE_01109 8.4e-72 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
MODELEPE_01110 3.3e-103 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
MODELEPE_01111 4.8e-69 V Abi-like protein
MODELEPE_01112 1.2e-195 3.4.22.70 M Sortase family
MODELEPE_01113 8.7e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
MODELEPE_01114 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
MODELEPE_01115 1.1e-96 K Bacterial regulatory proteins, tetR family
MODELEPE_01116 1.2e-216 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
MODELEPE_01117 6.5e-54 S TIGRFAM helicase secretion neighborhood TadE-like protein
MODELEPE_01118 3.7e-58 U TadE-like protein
MODELEPE_01119 1.1e-41 S Protein of unknown function (DUF4244)
MODELEPE_01120 9.8e-115 gspF NU Type II secretion system (T2SS), protein F
MODELEPE_01121 1.2e-74 U Type ii secretion system
MODELEPE_01122 2.2e-190 cpaF U Type II IV secretion system protein
MODELEPE_01123 6.7e-125 cpaE D bacterial-type flagellum organization
MODELEPE_01124 1.6e-134 dedA S SNARE associated Golgi protein
MODELEPE_01125 5.1e-127 S HAD hydrolase, family IA, variant 3
MODELEPE_01126 1.1e-141 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
MODELEPE_01127 1.5e-114 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
MODELEPE_01128 3.1e-17 F Psort location CytoplasmicMembrane, score 10.00
MODELEPE_01129 1.2e-103 hspR K transcriptional regulator, MerR family
MODELEPE_01130 9.4e-157 dnaJ1 O DnaJ molecular chaperone homology domain
MODELEPE_01131 1e-58 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
MODELEPE_01132 0.0 dnaK O Heat shock 70 kDa protein
MODELEPE_01133 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 M Aamy_C
MODELEPE_01134 3.3e-194 K Psort location Cytoplasmic, score
MODELEPE_01135 4.5e-146 traX S TraX protein
MODELEPE_01136 1.2e-166 malG G Binding-protein-dependent transport system inner membrane component
MODELEPE_01137 9.4e-256 malF G Binding-protein-dependent transport system inner membrane component
MODELEPE_01138 2.8e-235 malE G Bacterial extracellular solute-binding protein
MODELEPE_01139 0.0 malL 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
MODELEPE_01140 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
MODELEPE_01141 1.6e-174 3.4.22.70 M Sortase family
MODELEPE_01142 0.0 M domain protein
MODELEPE_01143 0.0 M cell wall anchor domain protein
MODELEPE_01144 1.4e-187 K Psort location Cytoplasmic, score
MODELEPE_01145 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
MODELEPE_01146 3.7e-204 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
MODELEPE_01147 1.5e-202 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
MODELEPE_01148 1.4e-251 yhjE EGP Sugar (and other) transporter
MODELEPE_01149 2.8e-180 K helix_turn _helix lactose operon repressor
MODELEPE_01150 1.2e-278 scrT G Transporter major facilitator family protein
MODELEPE_01151 6.1e-301 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
MODELEPE_01153 2.1e-202 K helix_turn _helix lactose operon repressor
MODELEPE_01154 8.7e-58 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
MODELEPE_01155 2.2e-148 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
MODELEPE_01156 4.1e-281 clcA P Voltage gated chloride channel
MODELEPE_01157 3.1e-245 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
MODELEPE_01158 6.1e-199 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
MODELEPE_01159 1.4e-148 yicL EG EamA-like transporter family
MODELEPE_01161 1.5e-172 htpX O Belongs to the peptidase M48B family
MODELEPE_01162 1.8e-278 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
MODELEPE_01163 0.0 cadA P E1-E2 ATPase
MODELEPE_01164 4.1e-262 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
MODELEPE_01165 1.3e-262 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
MODELEPE_01167 5.3e-145 yplQ S Haemolysin-III related
MODELEPE_01168 3.5e-52 ybjQ S Putative heavy-metal-binding
MODELEPE_01169 1.8e-74 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
MODELEPE_01170 0.0 KL Domain of unknown function (DUF3427)
MODELEPE_01171 1.4e-305 KL Domain of unknown function (DUF3427)
MODELEPE_01172 4.1e-163 M Glycosyltransferase like family 2
MODELEPE_01173 5.2e-198 S Fic/DOC family
MODELEPE_01174 5.7e-132 S Pyridoxamine 5'-phosphate oxidase
MODELEPE_01175 9e-200 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
MODELEPE_01176 0.0 lysX S Uncharacterised conserved protein (DUF2156)
MODELEPE_01177 6.6e-254 S Putative esterase
MODELEPE_01178 2.1e-19
MODELEPE_01179 2.7e-177 yddG EG EamA-like transporter family
MODELEPE_01180 5.1e-87 hsp20 O Hsp20/alpha crystallin family
MODELEPE_01181 9.5e-212 pldB 3.1.1.5 I Serine aminopeptidase, S33
MODELEPE_01182 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
MODELEPE_01183 2e-129 fhaA T Protein of unknown function (DUF2662)
MODELEPE_01184 2.1e-75 fhaB T Inner membrane component of T3SS, cytoplasmic domain
MODELEPE_01185 9.1e-271 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
MODELEPE_01186 1.2e-278 rodA D Belongs to the SEDS family
MODELEPE_01187 1.4e-262 pbpA M penicillin-binding protein
MODELEPE_01188 7.4e-172 T Protein tyrosine kinase
MODELEPE_01189 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
MODELEPE_01190 1.7e-119 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
MODELEPE_01191 4.6e-227 srtA 3.4.22.70 M Sortase family
MODELEPE_01192 1.8e-118 S Bacterial protein of unknown function (DUF881)
MODELEPE_01193 2.6e-69 crgA D Involved in cell division
MODELEPE_01194 2.5e-122 gluP 3.4.21.105 S Rhomboid family
MODELEPE_01195 1.2e-35
MODELEPE_01196 4.1e-278 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
MODELEPE_01197 1.2e-244 L Integrase core domain
MODELEPE_01198 1.2e-70 pdxH S Pfam:Pyridox_oxidase
MODELEPE_01199 2.7e-233 L ribosomal rna small subunit methyltransferase
MODELEPE_01200 5.4e-166 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
MODELEPE_01201 5.3e-170 corA P CorA-like Mg2+ transporter protein
MODELEPE_01202 1.3e-159 ET Bacterial periplasmic substrate-binding proteins
MODELEPE_01203 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
MODELEPE_01204 4.5e-44 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
MODELEPE_01205 2.8e-310 comE S Competence protein
MODELEPE_01206 9e-173 holA 2.7.7.7 L DNA polymerase III delta subunit
MODELEPE_01207 1.2e-87 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
MODELEPE_01208 3e-159 yeaZ 2.3.1.234 O Glycoprotease family
MODELEPE_01209 1e-105 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
MODELEPE_01210 6.2e-196 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
MODELEPE_01212 3.6e-120 K helix_turn_helix, Lux Regulon
MODELEPE_01213 1.4e-234 T Histidine kinase
MODELEPE_01215 6.7e-60
MODELEPE_01216 2.6e-139
MODELEPE_01217 1.9e-142 S ABC-2 family transporter protein
MODELEPE_01218 1.8e-198 V AAA domain, putative AbiEii toxin, Type IV TA system
MODELEPE_01219 9.1e-136 L PFAM Relaxase mobilization nuclease family protein
MODELEPE_01220 3.7e-145 S Fic/DOC family
MODELEPE_01224 1.5e-124 2.7.11.1 S HipA-like C-terminal domain
MODELEPE_01225 3.9e-52 xerH L Phage integrase family
MODELEPE_01227 3.6e-87 M Peptidase family M23
MODELEPE_01228 1e-256 G ABC transporter substrate-binding protein
MODELEPE_01229 2.3e-242 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
MODELEPE_01230 1.5e-208 guaB 1.1.1.205 F IMP dehydrogenase family protein
MODELEPE_01231 3.3e-91
MODELEPE_01232 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
MODELEPE_01233 1.7e-87 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
MODELEPE_01234 5.8e-144 rpsB J Belongs to the universal ribosomal protein uS2 family
MODELEPE_01235 3.1e-145 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
MODELEPE_01236 2.8e-134 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
MODELEPE_01237 2.6e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
MODELEPE_01238 1.8e-173 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
MODELEPE_01239 3.3e-222 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
MODELEPE_01240 3.6e-76 3.5.1.124 S DJ-1/PfpI family
MODELEPE_01241 6.1e-140 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
MODELEPE_01242 5.3e-71 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
MODELEPE_01243 3.2e-297 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
MODELEPE_01244 6.4e-92 yijF S Domain of unknown function (DUF1287)
MODELEPE_01245 7.9e-172 3.6.4.12
MODELEPE_01246 1.3e-75
MODELEPE_01247 2.5e-64 yeaO K Protein of unknown function, DUF488
MODELEPE_01249 1.4e-295 mmuP E amino acid
MODELEPE_01250 6.3e-20 G Major facilitator Superfamily
MODELEPE_01251 1.7e-39 2.6.1.76 EGP Major Facilitator Superfamily
MODELEPE_01253 5e-49 hipA 2.7.11.1 S kinase activity
MODELEPE_01254 1.3e-45 K sequence-specific DNA binding
MODELEPE_01255 3.2e-110
MODELEPE_01256 5.5e-71 K Transcriptional regulator
MODELEPE_01257 1.3e-52
MODELEPE_01258 7.4e-49 S Protein of unknown function (DUF2089)
MODELEPE_01260 2.3e-162 V ABC transporter
MODELEPE_01261 3.2e-251 V Efflux ABC transporter, permease protein
MODELEPE_01262 2.8e-224 T Histidine kinase
MODELEPE_01263 8.8e-119 K Bacterial regulatory proteins, luxR family
MODELEPE_01264 2.4e-50 L Transposase and inactivated derivatives IS30 family
MODELEPE_01265 3.3e-109 3.1.3.48 T Low molecular weight phosphatase family
MODELEPE_01266 5.7e-208 GT4 M Psort location Cytoplasmic, score 8.87
MODELEPE_01267 1.4e-245 MA20_17390 GT4 M Glycosyl transferases group 1
MODELEPE_01268 1.5e-253 cps2J S Polysaccharide biosynthesis protein
MODELEPE_01269 8.3e-201 2.4.1.166 GT2 M Glycosyltransferase like family 2
MODELEPE_01270 5.1e-133 H Hexapeptide repeat of succinyl-transferase
MODELEPE_01271 1e-212 S Polysaccharide pyruvyl transferase
MODELEPE_01272 5.8e-188 M Glycosyltransferase like family 2
MODELEPE_01274 5.9e-194 wzy S EpsG family
MODELEPE_01275 1.6e-191 G Acyltransferase family
MODELEPE_01277 1.4e-150 L IstB-like ATP binding protein
MODELEPE_01278 1.6e-42 L Transposase
MODELEPE_01279 3.6e-148 L IstB-like ATP binding protein
MODELEPE_01280 9.8e-296 L PFAM Integrase catalytic
MODELEPE_01281 0.0 E ABC transporter, substrate-binding protein, family 5
MODELEPE_01282 0.0 S Glycosyl hydrolases related to GH101 family, GH129
MODELEPE_01283 1e-81
MODELEPE_01284 1.9e-244 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
MODELEPE_01285 4.2e-158 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
MODELEPE_01286 3.2e-158 S Sucrose-6F-phosphate phosphohydrolase
MODELEPE_01288 1e-88 G transmembrane transporter activity
MODELEPE_01290 2.7e-203 EGP Major facilitator Superfamily
MODELEPE_01291 5.5e-19 S ThiS family
MODELEPE_01292 3.6e-148 L IstB-like ATP binding protein
MODELEPE_01293 9.8e-296 L PFAM Integrase catalytic
MODELEPE_01294 7.4e-25
MODELEPE_01296 7.4e-25
MODELEPE_01297 7.4e-25
MODELEPE_01298 4.9e-142 cobB2 K Sir2 family
MODELEPE_01299 1.5e-231 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
MODELEPE_01300 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
MODELEPE_01301 2.9e-154 G Binding-protein-dependent transport system inner membrane component
MODELEPE_01302 1.2e-140 malC G Binding-protein-dependent transport system inner membrane component
MODELEPE_01303 2.3e-245 msmE7 G Bacterial extracellular solute-binding protein
MODELEPE_01304 1.2e-230 nagC GK ROK family
MODELEPE_01305 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
MODELEPE_01306 2.6e-79 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
MODELEPE_01307 0.0 yjcE P Sodium/hydrogen exchanger family
MODELEPE_01308 2.5e-120 S membrane transporter protein
MODELEPE_01309 7.3e-146 ypfH S Phospholipase/Carboxylesterase
MODELEPE_01310 4.6e-152
MODELEPE_01311 9e-112 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
MODELEPE_01312 2.3e-36
MODELEPE_01313 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
MODELEPE_01314 2e-16 K helix_turn _helix lactose operon repressor
MODELEPE_01315 7.5e-86 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
MODELEPE_01316 1.6e-288 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
MODELEPE_01317 3.5e-206 EGP Major facilitator Superfamily
MODELEPE_01318 1.2e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
MODELEPE_01319 7.2e-166 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
MODELEPE_01320 4.6e-301 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
MODELEPE_01321 1.6e-271 KLT Domain of unknown function (DUF4032)
MODELEPE_01322 1.7e-154
MODELEPE_01323 7.6e-18 tnp7109-21 L Integrase core domain
MODELEPE_01324 1.1e-131 K helix_turn _helix lactose operon repressor
MODELEPE_01325 4.2e-146 G Periplasmic binding protein domain
MODELEPE_01326 8.7e-178 3.6.3.17 G ATPases associated with a variety of cellular activities
MODELEPE_01327 5e-142 U Branched-chain amino acid transport system / permease component
MODELEPE_01328 1e-185
MODELEPE_01329 1.2e-146 tnp3514b L Winged helix-turn helix
MODELEPE_01330 6.2e-48 S LPXTG-motif cell wall anchor domain protein
MODELEPE_01331 4.3e-211 ugpC E Belongs to the ABC transporter superfamily
MODELEPE_01332 6e-137 K UTRA domain
MODELEPE_01333 2.2e-241 ulaA 2.7.1.194 S PTS system sugar-specific permease component
MODELEPE_01334 3.7e-45 ulaB 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
MODELEPE_01335 2.1e-73 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
MODELEPE_01336 7.8e-216 2.4.1.166 GT2 M Glycosyltransferase like family 2
MODELEPE_01337 1.3e-190 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
MODELEPE_01339 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
MODELEPE_01340 5.1e-87 nrdI F Probably involved in ribonucleotide reductase function
MODELEPE_01341 3.1e-43 nrdH O Glutaredoxin
MODELEPE_01342 2.3e-113 3.2.1.21 GH3 G Fibronectin type III-like domain
MODELEPE_01343 0.0 KLT Protein tyrosine kinase
MODELEPE_01344 3e-136 O Thioredoxin
MODELEPE_01346 2e-216 S G5
MODELEPE_01347 4.4e-169 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
MODELEPE_01348 1.5e-177 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
MODELEPE_01349 4.8e-111 S LytR cell envelope-related transcriptional attenuator
MODELEPE_01350 2.1e-282 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
MODELEPE_01351 2.4e-165 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
MODELEPE_01352 0.0
MODELEPE_01353 0.0 murJ KLT MviN-like protein
MODELEPE_01354 4.5e-175 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
MODELEPE_01355 2.7e-222 parB K Belongs to the ParB family
MODELEPE_01356 6.8e-173 parA D CobQ CobB MinD ParA nucleotide binding domain protein
MODELEPE_01357 3.4e-123 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
MODELEPE_01358 3e-93 jag S Putative single-stranded nucleic acids-binding domain
MODELEPE_01359 9.3e-181 yidC U Membrane protein insertase, YidC Oxa1 family
MODELEPE_01360 8.5e-57 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
MODELEPE_01361 2.6e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
MODELEPE_01362 3.3e-280 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
MODELEPE_01363 5.5e-206 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
MODELEPE_01364 1.1e-201 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
MODELEPE_01365 4.2e-83 S Protein of unknown function (DUF721)
MODELEPE_01366 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
MODELEPE_01367 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
MODELEPE_01368 4.6e-49 S Transmembrane domain of unknown function (DUF3566)
MODELEPE_01369 1.3e-182 lacR K Transcriptional regulator, LacI family
MODELEPE_01370 2.9e-16 lacS G Psort location CytoplasmicMembrane, score 10.00
MODELEPE_01371 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
MODELEPE_01372 1.4e-203 V VanZ like family
MODELEPE_01373 1.3e-257 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
MODELEPE_01374 5.3e-197 S Psort location CytoplasmicMembrane, score
MODELEPE_01377 1.5e-123 S Protein of unknown function DUF45
MODELEPE_01379 2.2e-251 S Domain of unknown function (DUF4143)
MODELEPE_01380 9.5e-83 dps P Belongs to the Dps family
MODELEPE_01381 2.9e-230 ytfL P Transporter associated domain
MODELEPE_01382 1.1e-206 S AAA ATPase domain
MODELEPE_01383 2.8e-120 cah 4.2.1.1 P Reversible hydration of carbon dioxide
MODELEPE_01384 1e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
MODELEPE_01385 0.0 trxB2 1.8.1.9 C Thioredoxin domain
MODELEPE_01386 1.2e-244 L Integrase core domain
MODELEPE_01387 2.4e-50 L Transposase and inactivated derivatives IS30 family
MODELEPE_01388 5.2e-18
MODELEPE_01389 8.2e-63 S Abi-like protein
MODELEPE_01390 2.5e-24 K Transposase IS116 IS110 IS902
MODELEPE_01392 2.4e-259 S Psort location CytoplasmicMembrane, score 9.99
MODELEPE_01393 6.4e-70
MODELEPE_01394 9e-246 wcoI DM Psort location CytoplasmicMembrane, score
MODELEPE_01395 5.3e-171
MODELEPE_01396 2.2e-171 S G5
MODELEPE_01397 1.9e-59 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
MODELEPE_01398 1.6e-120 F Domain of unknown function (DUF4916)
MODELEPE_01399 5.4e-158 mhpC I Alpha/beta hydrolase family
MODELEPE_01400 4.4e-212 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
MODELEPE_01401 5.9e-70 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
MODELEPE_01402 1.2e-224 S Uncharacterized conserved protein (DUF2183)
MODELEPE_01403 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
MODELEPE_01404 1.6e-191 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
MODELEPE_01405 2.1e-219 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
MODELEPE_01406 2.1e-134 glxR K helix_turn_helix, cAMP Regulatory protein
MODELEPE_01407 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
MODELEPE_01408 6.3e-230 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
MODELEPE_01409 6.1e-229 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
MODELEPE_01410 3.1e-122 glpR K DeoR C terminal sensor domain
MODELEPE_01411 8.6e-253 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
MODELEPE_01412 5.3e-234 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
MODELEPE_01413 6.4e-44 gcvR T Belongs to the UPF0237 family
MODELEPE_01414 3.2e-253 S UPF0210 protein
MODELEPE_01415 7.6e-115 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
MODELEPE_01416 1.1e-186 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
MODELEPE_01417 2.3e-128
MODELEPE_01418 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
MODELEPE_01419 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
MODELEPE_01420 0.0 E Transglutaminase-like superfamily
MODELEPE_01421 3.6e-238 S Protein of unknown function DUF58
MODELEPE_01422 0.0 S Fibronectin type 3 domain
MODELEPE_01423 6.1e-221 KLT Protein tyrosine kinase
MODELEPE_01424 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
MODELEPE_01425 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
MODELEPE_01426 2.5e-234 G Major Facilitator Superfamily
MODELEPE_01427 7.1e-133 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
MODELEPE_01428 1e-165 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
MODELEPE_01429 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
MODELEPE_01430 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
MODELEPE_01431 1.2e-258 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
MODELEPE_01432 4.4e-123 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
MODELEPE_01433 5e-268 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
MODELEPE_01434 1.6e-205 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
MODELEPE_01435 1.5e-190 ftsE D Cell division ATP-binding protein FtsE
MODELEPE_01436 9.8e-161 ftsX D Part of the ABC transporter FtsEX involved in cellular division
MODELEPE_01437 6e-143 usp 3.5.1.28 CBM50 D CHAP domain protein
MODELEPE_01438 1.4e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
MODELEPE_01439 5.6e-143 pknD ET ABC transporter, substrate-binding protein, family 3
MODELEPE_01440 5.8e-169 pknD ET ABC transporter, substrate-binding protein, family 3
MODELEPE_01441 8e-153 yecS E Binding-protein-dependent transport system inner membrane component
MODELEPE_01442 1.6e-149 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
MODELEPE_01443 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
MODELEPE_01444 4.4e-140 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
MODELEPE_01445 1.5e-186 K Periplasmic binding protein domain
MODELEPE_01446 2.2e-168 malC G Binding-protein-dependent transport system inner membrane component
MODELEPE_01447 4.4e-167 G ABC transporter permease
MODELEPE_01448 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
MODELEPE_01449 5.1e-259 G Bacterial extracellular solute-binding protein
MODELEPE_01450 4e-278 G Bacterial extracellular solute-binding protein
MODELEPE_01451 1.7e-142 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
MODELEPE_01452 4e-290 E ABC transporter, substrate-binding protein, family 5
MODELEPE_01453 2.8e-166 P Binding-protein-dependent transport system inner membrane component
MODELEPE_01454 5.9e-148 EP Binding-protein-dependent transport system inner membrane component
MODELEPE_01455 4.6e-135 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
MODELEPE_01456 1.3e-137 sapF E ATPases associated with a variety of cellular activities
MODELEPE_01457 3.7e-193 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
MODELEPE_01458 1.4e-220 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
MODELEPE_01459 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
MODELEPE_01460 2.7e-93 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
MODELEPE_01461 1.7e-104 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
MODELEPE_01462 1.1e-272 yhdG E aromatic amino acid transport protein AroP K03293
MODELEPE_01463 1.5e-263 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
MODELEPE_01464 3.4e-244 dgt 3.1.5.1 F Phosphohydrolase-associated domain
MODELEPE_01465 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
MODELEPE_01466 3.1e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
MODELEPE_01467 1.1e-115 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
MODELEPE_01468 1.5e-294 EK Alanine-glyoxylate amino-transferase
MODELEPE_01469 1.5e-209 ybiR P Citrate transporter
MODELEPE_01470 3.3e-30
MODELEPE_01472 3.7e-42 G Alpha-L-arabinofuranosidase C-terminal domain
MODELEPE_01473 9.5e-158 K Helix-turn-helix domain, rpiR family
MODELEPE_01476 4.3e-258 G Bacterial extracellular solute-binding protein
MODELEPE_01477 9.9e-225 K helix_turn _helix lactose operon repressor
MODELEPE_01478 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
MODELEPE_01479 3.1e-14 L Psort location Cytoplasmic, score 8.87
MODELEPE_01480 0.0 E ABC transporter, substrate-binding protein, family 5
MODELEPE_01481 5.5e-86 msrA 1.8.4.11, 1.8.4.12 O peptide-methionine (S)-S-oxide reductase activity
MODELEPE_01482 6.2e-135 V ATPases associated with a variety of cellular activities
MODELEPE_01483 9.1e-181 M Conserved repeat domain
MODELEPE_01484 2.1e-285 macB_8 V MacB-like periplasmic core domain
MODELEPE_01485 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
MODELEPE_01486 4.8e-182 adh3 C Zinc-binding dehydrogenase
MODELEPE_01487 4.3e-86 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
MODELEPE_01488 4.2e-225 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
MODELEPE_01489 1.2e-68 zur P Belongs to the Fur family
MODELEPE_01490 5.7e-84 ylbB V FtsX-like permease family
MODELEPE_01491 2.9e-27 ylbB V FtsX-like permease family
MODELEPE_01492 4e-70 XK27_06785 V ABC transporter
MODELEPE_01493 6.1e-35
MODELEPE_01494 8.7e-27 zur P Ferric uptake regulator family
MODELEPE_01495 7.8e-140 S TIGRFAM TIGR03943 family protein
MODELEPE_01496 1.4e-180 ycgR S Predicted permease
MODELEPE_01497 2.3e-25 adcA P ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
MODELEPE_01498 1.3e-18 J Ribosomal L32p protein family
MODELEPE_01499 1.1e-14 rpmJ J Ribosomal protein L36
MODELEPE_01500 4.4e-34 rpmE2 J Ribosomal protein L31
MODELEPE_01501 2.5e-44 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
MODELEPE_01502 1.4e-20 rpmG J Ribosomal protein L33
MODELEPE_01503 3.9e-29 rpmB J Ribosomal L28 family
MODELEPE_01504 1.5e-98 S cobalamin synthesis protein
MODELEPE_01505 7.3e-156 P Zinc-uptake complex component A periplasmic
MODELEPE_01506 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
MODELEPE_01507 4.5e-299 aldH 1.2.1.3, 1.2.1.5 C Aldehyde dehydrogenase family
MODELEPE_01508 5.3e-242 purD 6.3.4.13 F Belongs to the GARS family
MODELEPE_01509 1.2e-183 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
MODELEPE_01510 9.3e-294 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
MODELEPE_01511 3e-290 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
MODELEPE_01512 3.5e-32
MODELEPE_01513 2.7e-15 C Aldo/keto reductase family
MODELEPE_01514 1.1e-102 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
MODELEPE_01515 2.4e-08 S Protein of unknown function (DUF4230)
MODELEPE_01518 1.5e-29 S Protein of unknown function (DUF4230)
MODELEPE_01519 1.9e-144
MODELEPE_01520 1.6e-109 Q D-alanine [D-alanyl carrier protein] ligase activity
MODELEPE_01521 5.2e-251 Q D-alanine [D-alanyl carrier protein] ligase activity
MODELEPE_01522 6.3e-222 I alpha/beta hydrolase fold
MODELEPE_01523 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
MODELEPE_01524 3.3e-138 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
MODELEPE_01525 8.2e-222 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
MODELEPE_01526 1.9e-228 mtnE 2.6.1.83 E Aminotransferase class I and II
MODELEPE_01527 2.6e-219 M Glycosyl transferase 4-like domain
MODELEPE_01528 6.1e-196 ltaE 4.1.2.48 E Beta-eliminating lyase
MODELEPE_01530 6.6e-111 yocS S SBF-like CPA transporter family (DUF4137)
MODELEPE_01531 9.3e-62 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
MODELEPE_01532 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
MODELEPE_01533 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
MODELEPE_01534 6.2e-232 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
MODELEPE_01535 3.5e-129 tmp1 S Domain of unknown function (DUF4391)
MODELEPE_01536 7.8e-146 rlrG K Bacterial regulatory helix-turn-helix protein, lysR family
MODELEPE_01537 2.7e-186 MA20_14895 S Conserved hypothetical protein 698
MODELEPE_01538 2.7e-32 S Psort location CytoplasmicMembrane, score
MODELEPE_01539 1.2e-58 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
MODELEPE_01540 1.4e-87 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
MODELEPE_01541 5.3e-18 K MerR family regulatory protein
MODELEPE_01542 3e-16 K MerR family regulatory protein
MODELEPE_01543 7.3e-197 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
MODELEPE_01544 3.9e-259 S Domain of unknown function (DUF4143)
MODELEPE_01545 9.9e-109 P Protein of unknown function DUF47
MODELEPE_01546 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
MODELEPE_01547 7.5e-242 vbsD V MatE
MODELEPE_01548 1.2e-123 magIII L endonuclease III
MODELEPE_01549 9.1e-14 laaE K Transcriptional regulator PadR-like family
MODELEPE_01550 5.7e-110 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
MODELEPE_01551 1.6e-39 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
MODELEPE_01552 2.3e-185 S Membrane transport protein
MODELEPE_01553 7.4e-48 4.1.1.44 L Cupin 2, conserved barrel domain protein
MODELEPE_01555 0.0 M probably involved in cell wall
MODELEPE_01556 1.2e-244 L Integrase core domain
MODELEPE_01557 2.3e-256 G Bacterial extracellular solute-binding protein
MODELEPE_01558 1.1e-21 L Helix-turn-helix domain
MODELEPE_01559 1.1e-184 lacR K Transcriptional regulator, LacI family
MODELEPE_01560 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
MODELEPE_01561 6.6e-268 lacS G Psort location CytoplasmicMembrane, score 10.00
MODELEPE_01562 1.5e-12 sprF 4.6.1.1 M Cell surface antigen C-terminus
MODELEPE_01563 9.4e-16 L Phage integrase family
MODELEPE_01565 9.9e-161 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
MODELEPE_01568 1.6e-262 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
MODELEPE_01569 5.2e-204 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
MODELEPE_01570 2.3e-178 3.4.14.13 M Glycosyltransferase like family 2
MODELEPE_01571 7.3e-281 S AI-2E family transporter
MODELEPE_01572 4.7e-235 epsG M Glycosyl transferase family 21
MODELEPE_01573 1.8e-190 natA V ATPases associated with a variety of cellular activities
MODELEPE_01574 1.4e-298
MODELEPE_01575 6.7e-252 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
MODELEPE_01576 7.5e-211 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
MODELEPE_01577 2.7e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
MODELEPE_01578 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
MODELEPE_01579 2.8e-117 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
MODELEPE_01580 1.3e-162 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
MODELEPE_01581 9.4e-225 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
MODELEPE_01582 3.5e-86 S Protein of unknown function (DUF3180)
MODELEPE_01583 2.5e-169 tesB I Thioesterase-like superfamily
MODELEPE_01584 0.0 yjjK S ATP-binding cassette protein, ChvD family
MODELEPE_01585 2.1e-308 EGP Major Facilitator Superfamily
MODELEPE_01587 2.5e-175 glkA 2.7.1.2 G ROK family
MODELEPE_01588 1.2e-86 K Winged helix DNA-binding domain
MODELEPE_01589 4.3e-16 EGP Major facilitator superfamily
MODELEPE_01590 8.7e-164 dkgB S Oxidoreductase, aldo keto reductase family protein
MODELEPE_01591 1.5e-68 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
MODELEPE_01592 2.4e-147
MODELEPE_01593 1.1e-99 yebQ EGP Major facilitator Superfamily
MODELEPE_01595 1.3e-36 rpmE J Binds the 23S rRNA
MODELEPE_01596 4.1e-190 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
MODELEPE_01597 2.4e-164 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
MODELEPE_01598 7.5e-206 livK E Receptor family ligand binding region
MODELEPE_01599 3.6e-107 U Belongs to the binding-protein-dependent transport system permease family
MODELEPE_01600 1.4e-187 livM U Belongs to the binding-protein-dependent transport system permease family
MODELEPE_01601 1.1e-161 E Branched-chain amino acid ATP-binding cassette transporter
MODELEPE_01602 2.5e-124 livF E ATPases associated with a variety of cellular activities
MODELEPE_01603 1.5e-118 ywlC 2.7.7.87 J Belongs to the SUA5 family
MODELEPE_01604 3e-213 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
MODELEPE_01605 4.8e-293 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
MODELEPE_01606 4.8e-122 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
MODELEPE_01607 1.3e-268 recD2 3.6.4.12 L PIF1-like helicase
MODELEPE_01608 1.2e-35 pflA 1.97.1.4 O Radical SAM superfamily
MODELEPE_01609 1.6e-100 pflA 1.97.1.4 O Radical SAM superfamily
MODELEPE_01610 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
MODELEPE_01611 2.9e-114 L Single-strand binding protein family
MODELEPE_01612 0.0 pepO 3.4.24.71 O Peptidase family M13
MODELEPE_01613 5.2e-143 S Short repeat of unknown function (DUF308)
MODELEPE_01614 6e-151 map 3.4.11.18 E Methionine aminopeptidase
MODELEPE_01615 2.4e-250 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
MODELEPE_01616 9.8e-146 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
MODELEPE_01617 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
MODELEPE_01618 1.2e-100 XK27_03610 K Acetyltransferase (GNAT) domain
MODELEPE_01619 7.4e-88 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
MODELEPE_01620 8.5e-201 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
MODELEPE_01621 1.3e-232 aspB E Aminotransferase class-V
MODELEPE_01622 4.9e-179 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
MODELEPE_01623 1.6e-200 S Endonuclease/Exonuclease/phosphatase family
MODELEPE_01625 3.7e-78 F Nucleoside 2-deoxyribosyltransferase
MODELEPE_01626 3.2e-65 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
MODELEPE_01627 0.0 fadD 6.2.1.3 I AMP-binding enzyme
MODELEPE_01628 5.1e-91 ywrO 1.6.5.2 S Flavodoxin-like fold
MODELEPE_01629 2.4e-41 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
MODELEPE_01630 3.1e-256 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
MODELEPE_01631 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
MODELEPE_01632 3.8e-144 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
MODELEPE_01633 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
MODELEPE_01634 2.5e-255 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
MODELEPE_01635 9.6e-129 K Bacterial regulatory proteins, tetR family
MODELEPE_01636 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
MODELEPE_01638 1.2e-45 S Nucleotidyltransferase domain
MODELEPE_01639 2.6e-70 S Nucleotidyltransferase substrate binding protein like
MODELEPE_01640 9.2e-236 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
MODELEPE_01641 5.5e-181 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
MODELEPE_01642 1.2e-89 K MarR family
MODELEPE_01643 0.0 V ABC transporter, ATP-binding protein
MODELEPE_01644 0.0 V ABC transporter transmembrane region
MODELEPE_01645 7.9e-127 rbsR K helix_turn _helix lactose operon repressor
MODELEPE_01646 2.4e-43 K acetyltransferase
MODELEPE_01647 2.6e-105 rihB 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
MODELEPE_01648 4.7e-162 dcuD C C4-dicarboxylate anaerobic carrier
MODELEPE_01649 1.1e-149 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
MODELEPE_01650 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
MODELEPE_01651 1.3e-199 P Bacterial extracellular solute-binding protein
MODELEPE_01652 4.4e-150 U Binding-protein-dependent transport system inner membrane component
MODELEPE_01653 3.7e-160 U Binding-protein-dependent transport system inner membrane component
MODELEPE_01654 1.1e-201 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
MODELEPE_01655 6.3e-159 I type I phosphodiesterase nucleotide pyrophosphatase
MODELEPE_01657 0.0 hsdR 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
MODELEPE_01658 2.3e-244 hsdM 2.1.1.72 V HsdM N-terminal domain
MODELEPE_01659 1.1e-76 3.1.21.3 V Type I restriction modification DNA specificity domain
MODELEPE_01660 4e-53 3.1.21.3 V Type I restriction modification DNA specificity domain protein
MODELEPE_01661 2.9e-107 L Belongs to the 'phage' integrase family
MODELEPE_01662 4.7e-70 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
MODELEPE_01663 9.4e-39 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
MODELEPE_01664 4.4e-79 hsdS 3.1.21.3 V type I restriction modification DNA specificity domain
MODELEPE_01665 1.8e-187 3.6.4.12 K Putative DNA-binding domain
MODELEPE_01666 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
MODELEPE_01667 1.3e-149 G Fic/DOC family
MODELEPE_01668 2.1e-227 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
MODELEPE_01669 4.2e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
MODELEPE_01670 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
MODELEPE_01671 1.6e-188 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
MODELEPE_01672 1.6e-131 3.8.1.2 S Haloacid dehalogenase-like hydrolase
MODELEPE_01673 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
MODELEPE_01674 2.1e-118 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
MODELEPE_01675 9.4e-124 apl 3.1.3.1 S SNARE associated Golgi protein
MODELEPE_01676 4e-287 arc O AAA ATPase forming ring-shaped complexes
MODELEPE_01677 1.4e-135 3.8.1.2 S Haloacid dehalogenase-like hydrolase
MODELEPE_01678 3.8e-279 manR K PRD domain
MODELEPE_01679 8.8e-72 H Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
MODELEPE_01680 1.8e-78 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
MODELEPE_01681 2.1e-46 fruA 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
MODELEPE_01682 1.7e-162 G Phosphotransferase System
MODELEPE_01683 8.4e-136 alsE 5.1.3.1 G Ribulose-phosphate 3 epimerase family
MODELEPE_01684 0.0 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
MODELEPE_01685 8.9e-175 hisN 3.1.3.25 G Inositol monophosphatase family
MODELEPE_01687 3.5e-285 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
MODELEPE_01688 8.1e-42 hup L Belongs to the bacterial histone-like protein family
MODELEPE_01689 0.0 S Lysylphosphatidylglycerol synthase TM region
MODELEPE_01690 3.3e-280 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
MODELEPE_01691 1.3e-111 ykoE S ABC-type cobalt transport system, permease component
MODELEPE_01692 1.9e-257 S PGAP1-like protein
MODELEPE_01693 3.1e-56
MODELEPE_01694 1e-153 S von Willebrand factor (vWF) type A domain
MODELEPE_01695 9.7e-189 S von Willebrand factor (vWF) type A domain
MODELEPE_01696 2.6e-84
MODELEPE_01697 1.1e-162 S Protein of unknown function DUF58
MODELEPE_01698 1.4e-187 moxR S ATPase family associated with various cellular activities (AAA)
MODELEPE_01699 3.8e-133 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
MODELEPE_01700 4.5e-83 S LytR cell envelope-related transcriptional attenuator
MODELEPE_01701 8.8e-37 K 'Cold-shock' DNA-binding domain
MODELEPE_01702 8e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
MODELEPE_01703 4.2e-33 S Proteins of 100 residues with WXG
MODELEPE_01704 2.5e-99
MODELEPE_01705 2e-132 KT Response regulator receiver domain protein
MODELEPE_01706 2.3e-308 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
MODELEPE_01707 1.7e-66 cspB K 'Cold-shock' DNA-binding domain
MODELEPE_01708 1.4e-176 S Protein of unknown function (DUF3027)
MODELEPE_01709 2.4e-178 uspA T Belongs to the universal stress protein A family
MODELEPE_01710 0.0 clpC O ATPase family associated with various cellular activities (AAA)
MODELEPE_01711 3e-26 K helix_turn_helix, arabinose operon control protein
MODELEPE_01712 3e-132 xylE U Sugar (and other) transporter
MODELEPE_01713 9.6e-59 lipA I Hydrolase, alpha beta domain protein
MODELEPE_01714 0.0 3.1.3.5 F 5'-nucleotidase, C-terminal domain
MODELEPE_01715 4.4e-224 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
MODELEPE_01716 5.9e-261 hisS 6.1.1.21 J Histidyl-tRNA synthetase
MODELEPE_01717 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
MODELEPE_01718 1.8e-101 S Aminoacyl-tRNA editing domain
MODELEPE_01719 3.1e-153 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
MODELEPE_01720 5.3e-147 gluB ET Belongs to the bacterial solute-binding protein 3 family
MODELEPE_01721 1.2e-110 gluC E Binding-protein-dependent transport system inner membrane component
MODELEPE_01722 1.2e-194 gluD E Binding-protein-dependent transport system inner membrane component
MODELEPE_01723 1.1e-289 phoN I PAP2 superfamily
MODELEPE_01724 5.1e-111 argO S LysE type translocator
MODELEPE_01725 5.7e-288 ydfD EK Alanine-glyoxylate amino-transferase
MODELEPE_01726 1.1e-198 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
MODELEPE_01727 0.0 helY L DEAD DEAH box helicase
MODELEPE_01728 7.5e-250 rarA L Recombination factor protein RarA
MODELEPE_01729 6.9e-11 KT Transcriptional regulatory protein, C terminal
MODELEPE_01730 7.9e-34 mtrB 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MODELEPE_01731 4.2e-251 EGP Major facilitator Superfamily
MODELEPE_01732 3.8e-187 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
MODELEPE_01733 2.9e-50
MODELEPE_01734 1.6e-53 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
MODELEPE_01735 3.1e-47 yhbY J CRS1_YhbY
MODELEPE_01736 0.0 ecfA GP ABC transporter, ATP-binding protein
MODELEPE_01737 1.3e-93 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
MODELEPE_01738 6.4e-198 S Glycosyltransferase, group 2 family protein
MODELEPE_01739 6.8e-147 C Putative TM nitroreductase
MODELEPE_01740 3.2e-141 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
MODELEPE_01741 0.0 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
MODELEPE_01742 4.6e-82 lacY P LacY proton/sugar symporter
MODELEPE_01743 4.3e-97 M1-431 S Protein of unknown function (DUF1706)
MODELEPE_01744 1.8e-195 K helix_turn _helix lactose operon repressor
MODELEPE_01745 4.1e-259 O SERine Proteinase INhibitors
MODELEPE_01746 1.3e-190
MODELEPE_01747 3.9e-122 K helix_turn_helix, Lux Regulon
MODELEPE_01748 8.1e-215 2.7.13.3 T Histidine kinase
MODELEPE_01749 7.1e-248 ydjK G Sugar (and other) transporter
MODELEPE_01750 5.6e-62 S Thiamine-binding protein
MODELEPE_01751 4.6e-146 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
MODELEPE_01752 6.9e-231 O AAA domain (Cdc48 subfamily)
MODELEPE_01753 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
MODELEPE_01754 7.6e-169 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
MODELEPE_01755 7e-95
MODELEPE_01756 5.3e-68 marR5 K Winged helix DNA-binding domain
MODELEPE_01757 9.1e-105
MODELEPE_01758 1.3e-139 cbiO V ATPases associated with a variety of cellular activities
MODELEPE_01759 1.4e-122
MODELEPE_01760 6.7e-297 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
MODELEPE_01761 8.3e-248 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
MODELEPE_01762 1.2e-211 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
MODELEPE_01763 5.9e-69 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
MODELEPE_01764 4.9e-45 yggT S YGGT family
MODELEPE_01765 2e-21 tccB2 V DivIVA protein
MODELEPE_01766 6e-89 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
MODELEPE_01767 2.6e-177 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
MODELEPE_01768 1.7e-201 K WYL domain
MODELEPE_01769 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
MODELEPE_01770 3e-34 yneG S Domain of unknown function (DUF4186)
MODELEPE_01771 1.8e-167 dkgA 1.1.1.346 C Aldo/keto reductase family
MODELEPE_01772 0.0 4.2.1.53 S MCRA family
MODELEPE_01773 7.4e-25
MODELEPE_01774 1.2e-37 4.2.1.68 M Enolase C-terminal domain-like
MODELEPE_01775 8.6e-98 4.2.1.68 M Enolase C-terminal domain-like
MODELEPE_01776 7.4e-141 IQ KR domain
MODELEPE_01777 7.5e-166 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
MODELEPE_01778 0.0 2.4.1.230, 3.2.1.51 GH65,GH95 G Glycosyl hydrolase family 65, N-terminal domain
MODELEPE_01779 7.7e-157 yvgN 1.1.1.346 S Aldo/keto reductase family
MODELEPE_01780 1.1e-53 acyP 3.6.1.7 C Acylphosphatase
MODELEPE_01781 3e-254 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
MODELEPE_01782 1.5e-219 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
MODELEPE_01783 4.6e-111 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
MODELEPE_01784 2.3e-99
MODELEPE_01785 9.1e-121 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
MODELEPE_01786 4.1e-130 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
MODELEPE_01787 4.4e-277 S Uncharacterized protein conserved in bacteria (DUF2252)
MODELEPE_01788 2.1e-265 glnA2 6.3.1.2 E glutamine synthetase
MODELEPE_01789 1.1e-217 EGP Major facilitator Superfamily
MODELEPE_01790 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
MODELEPE_01791 7.5e-123 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
MODELEPE_01792 2e-272 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
MODELEPE_01793 1.7e-176 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
MODELEPE_01794 7.7e-161 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
MODELEPE_01795 6.9e-130 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
MODELEPE_01796 3e-47 M Lysin motif
MODELEPE_01797 8.4e-78 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
MODELEPE_01798 7.5e-230 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
MODELEPE_01799 0.0 L DNA helicase
MODELEPE_01800 1.3e-93 mraZ K Belongs to the MraZ family
MODELEPE_01801 5.7e-189 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
MODELEPE_01802 4e-67 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
MODELEPE_01803 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
MODELEPE_01804 2e-155 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
MODELEPE_01805 3e-241 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
MODELEPE_01806 1.7e-204 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
MODELEPE_01807 4.3e-272 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
MODELEPE_01808 9.1e-223 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
MODELEPE_01809 9.4e-217 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
MODELEPE_01810 9.9e-283 murC 6.3.2.8 M Belongs to the MurCDEF family
MODELEPE_01811 4.3e-173 ftsQ 6.3.2.4 D Cell division protein FtsQ
MODELEPE_01812 7e-15
MODELEPE_01813 8.4e-87 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
MODELEPE_01814 6.5e-97 G Major Facilitator Superfamily
MODELEPE_01815 4.7e-168 2.7.1.4 G pfkB family carbohydrate kinase
MODELEPE_01816 1.3e-224 GK ROK family
MODELEPE_01817 2.2e-165 2.7.1.2 GK ROK family
MODELEPE_01818 3.1e-209 GK ROK family
MODELEPE_01819 6.2e-151 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
MODELEPE_01820 6.5e-248 nagA 3.5.1.25 G Amidohydrolase family
MODELEPE_01821 6.6e-98 3.6.1.55 F NUDIX domain
MODELEPE_01822 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
MODELEPE_01823 1.7e-301 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
MODELEPE_01824 0.0 smc D Required for chromosome condensation and partitioning
MODELEPE_01825 4e-81 V Acetyltransferase (GNAT) domain
MODELEPE_01826 6.9e-192 V Acetyltransferase (GNAT) domain
MODELEPE_01827 1.4e-284 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
MODELEPE_01828 3.6e-137 sigH K Belongs to the sigma-70 factor family. ECF subfamily
MODELEPE_01829 5.6e-52
MODELEPE_01830 1.1e-186 galM 5.1.3.3 G Aldose 1-epimerase
MODELEPE_01831 5.5e-191 galM 5.1.3.3 G Aldose 1-epimerase
MODELEPE_01832 3.7e-182 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
MODELEPE_01833 1.2e-88 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
MODELEPE_01834 3.7e-196 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
MODELEPE_01835 4.2e-135 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
MODELEPE_01836 9.5e-22 S Spermine/spermidine synthase domain
MODELEPE_01837 1.1e-112 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
MODELEPE_01838 6.2e-25 rpmI J Ribosomal protein L35
MODELEPE_01839 1.3e-61 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
MODELEPE_01840 9.3e-92 cdaR KT Putative sugar diacid recognition
MODELEPE_01841 5e-163 EG GntP family permease
MODELEPE_01842 5.8e-195 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
MODELEPE_01843 4.1e-159 xerD D recombinase XerD
MODELEPE_01844 3.8e-152 soj D CobQ CobB MinD ParA nucleotide binding domain protein
MODELEPE_01845 1.2e-149 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
MODELEPE_01846 1.1e-113 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
MODELEPE_01847 1.5e-155 nrtR 3.6.1.55 F NUDIX hydrolase
MODELEPE_01848 9.2e-250 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
MODELEPE_01849 2.7e-299 nadB 1.3.5.4, 1.4.3.16, 2.4.2.19 H Catalyzes the oxidation of L-aspartate to iminoaspartate
MODELEPE_01850 1.1e-161 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, N-terminal domain
MODELEPE_01851 1.8e-237 iscS1 2.8.1.7 E Aminotransferase class-V
MODELEPE_01852 5.9e-19 naiP U Sugar (and other) transporter
MODELEPE_01853 0.0 V FtsX-like permease family
MODELEPE_01854 4.8e-137 V ATPases associated with a variety of cellular activities
MODELEPE_01855 7e-107 K Virulence activator alpha C-term
MODELEPE_01856 0.0 typA T Elongation factor G C-terminus
MODELEPE_01857 5.2e-78
MODELEPE_01858 2e-188 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
MODELEPE_01859 2.5e-189 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
MODELEPE_01860 4.5e-42
MODELEPE_01861 0.0 MV MacB-like periplasmic core domain
MODELEPE_01862 4.9e-148 V ABC transporter, ATP-binding protein
MODELEPE_01863 1.8e-187 xerC D Belongs to the 'phage' integrase family. XerC subfamily
MODELEPE_01864 0.0 E ABC transporter, substrate-binding protein, family 5
MODELEPE_01865 8.9e-154 dppB EP Binding-protein-dependent transport system inner membrane component
MODELEPE_01866 1.4e-173 dppC EP N-terminal TM domain of oligopeptide transport permease C
MODELEPE_01867 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
MODELEPE_01868 3.3e-171 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
MODELEPE_01869 7.3e-155 S Protein of unknown function (DUF3710)
MODELEPE_01870 3.8e-134 S Protein of unknown function (DUF3159)
MODELEPE_01871 1.5e-241 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
MODELEPE_01872 2.8e-97
MODELEPE_01873 0.0 ctpE P E1-E2 ATPase
MODELEPE_01874 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
MODELEPE_01875 1.3e-119 E Psort location Cytoplasmic, score 8.87
MODELEPE_01876 1.6e-108 K helix_turn_helix, Lux Regulon
MODELEPE_01877 4.3e-136 ybhL S Belongs to the BI1 family
MODELEPE_01878 3.6e-166 ydeD EG EamA-like transporter family
MODELEPE_01879 5.2e-150 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
MODELEPE_01880 1.3e-276 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
MODELEPE_01881 3.1e-181 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
MODELEPE_01882 3.2e-151 fic D Fic/DOC family
MODELEPE_01883 0.0 ftsK D FtsK SpoIIIE family protein
MODELEPE_01884 2.3e-116 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
MODELEPE_01885 6e-97 cinA 3.5.1.42 S Belongs to the CinA family
MODELEPE_01886 1.1e-76 K Helix-turn-helix XRE-family like proteins
MODELEPE_01887 7e-39 S Protein of unknown function (DUF3046)
MODELEPE_01888 8.3e-197 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
MODELEPE_01889 3.5e-103 recX S Modulates RecA activity
MODELEPE_01890 1.3e-111 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
MODELEPE_01891 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
MODELEPE_01892 2.9e-193 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
MODELEPE_01893 1.2e-118
MODELEPE_01894 6.2e-131 plsC2 2.3.1.51 I Phosphate acyltransferases
MODELEPE_01895 0.0 pknL 2.7.11.1 KLT PASTA
MODELEPE_01896 6.5e-196 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
MODELEPE_01897 9.6e-115
MODELEPE_01898 8.3e-191 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
MODELEPE_01899 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
MODELEPE_01900 4.5e-222 G Major Facilitator Superfamily
MODELEPE_01901 9.8e-172 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
MODELEPE_01902 0.0 lhr L DEAD DEAH box helicase
MODELEPE_01903 1.2e-48 K Psort location Cytoplasmic, score
MODELEPE_01904 5.2e-43 K Psort location Cytoplasmic, score
MODELEPE_01905 3.5e-43 K AraC-like ligand binding domain
MODELEPE_01906 3e-110 G Bacterial extracellular solute-binding protein
MODELEPE_01907 3.2e-09 E GDSL-like Lipase/Acylhydrolase
MODELEPE_01908 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
MODELEPE_01909 1.5e-233 S Type I phosphodiesterase / nucleotide pyrophosphatase
MODELEPE_01910 1.2e-149 S Protein of unknown function (DUF3071)
MODELEPE_01911 1.4e-47 S Domain of unknown function (DUF4193)
MODELEPE_01912 1.9e-83 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
MODELEPE_01913 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
MODELEPE_01914 3.8e-102 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
MODELEPE_01915 9.8e-106 S Protein of unknown function (DUF3800)
MODELEPE_01916 5.1e-35 S Protein of unknown function DUF262
MODELEPE_01917 6.8e-105 S Protein of unknown function (DUF1524)
MODELEPE_01918 4.8e-22 S Protein of unknown function (DUF1524)
MODELEPE_01920 2.3e-74
MODELEPE_01922 2.2e-254 S HipA-like C-terminal domain
MODELEPE_01923 2.9e-171 S Fic/DOC family
MODELEPE_01924 7e-39
MODELEPE_01925 1e-15 L Phage integrase family
MODELEPE_01926 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
MODELEPE_01928 3.2e-175 srrA1 G Bacterial extracellular solute-binding protein
MODELEPE_01929 5.1e-123 G Binding-protein-dependent transport system inner membrane component
MODELEPE_01930 5.9e-125 lacG G Binding-protein-dependent transport system inner membrane component
MODELEPE_01931 1.2e-220 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
MODELEPE_01932 4.2e-139 K helix_turn _helix lactose operon repressor
MODELEPE_01933 3e-246 L PFAM Integrase catalytic
MODELEPE_01934 6.3e-240 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
MODELEPE_01935 4.3e-255 S Metal-independent alpha-mannosidase (GH125)
MODELEPE_01936 1.9e-31
MODELEPE_01937 2.1e-131 C Putative TM nitroreductase
MODELEPE_01938 2.4e-170 EG EamA-like transporter family
MODELEPE_01939 1.2e-244 L Integrase core domain

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)