ORF_ID e_value Gene_name EC_number CAZy COGs Description
BDAKENFB_00001 3.8e-274 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BDAKENFB_00002 1.1e-101 T Forkhead associated domain
BDAKENFB_00003 1.8e-103 B Belongs to the OprB family
BDAKENFB_00004 1.5e-163 3.1.3.16 T Sigma factor PP2C-like phosphatases
BDAKENFB_00005 6.1e-94 E Transglutaminase-like superfamily
BDAKENFB_00011 1.6e-20
BDAKENFB_00013 4.5e-196 topB 5.99.1.2 L DNA topoisomerase
BDAKENFB_00014 2.5e-76 XK27_08505 D nucleotidyltransferase activity
BDAKENFB_00015 9.2e-37 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
BDAKENFB_00016 1.3e-30 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
BDAKENFB_00017 2.3e-32
BDAKENFB_00018 0.0 traA 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
BDAKENFB_00019 7.7e-10
BDAKENFB_00020 2.8e-62
BDAKENFB_00022 2.1e-38 S Fic/DOC family
BDAKENFB_00023 6.3e-53 L single-stranded DNA binding
BDAKENFB_00025 5.6e-99 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
BDAKENFB_00026 2.5e-95 S Protein of unknown function (DUF2786)
BDAKENFB_00029 8.3e-47 VY92_07350 S Phage derived protein Gp49-like (DUF891)
BDAKENFB_00030 1.1e-31 K Helix-turn-helix domain
BDAKENFB_00031 3.5e-12 G Fic/DOC family
BDAKENFB_00033 1.4e-11 L Psort location Cytoplasmic, score
BDAKENFB_00034 1.4e-14 DJ Addiction module toxin, RelE StbE family
BDAKENFB_00035 4.9e-27 S Antitoxin component of a toxin-antitoxin (TA) module
BDAKENFB_00040 7.1e-59 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
BDAKENFB_00041 3.1e-275 G Bacterial extracellular solute-binding protein
BDAKENFB_00042 2.2e-246 G Bacterial extracellular solute-binding protein
BDAKENFB_00043 0.0 abfA1 3.2.1.55 GH51 G arabinose metabolic process
BDAKENFB_00044 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
BDAKENFB_00045 1.3e-10 L Phage integrase family
BDAKENFB_00047 6.2e-157 mltE2 M Bacteriophage peptidoglycan hydrolase
BDAKENFB_00050 2.7e-102
BDAKENFB_00051 3.2e-206
BDAKENFB_00052 6.2e-19
BDAKENFB_00057 1.8e-46
BDAKENFB_00058 5.1e-37
BDAKENFB_00059 9e-25
BDAKENFB_00060 1.7e-45
BDAKENFB_00063 3e-69
BDAKENFB_00064 0.0 XK27_00515 D Cell surface antigen C-terminus
BDAKENFB_00065 5e-96 M domain protein
BDAKENFB_00066 1.8e-81 S Listeria-Bacteroides repeat domain (List_Bact_rpt)
BDAKENFB_00067 1.5e-71 M Sortase family
BDAKENFB_00068 4.2e-38 D nuclear chromosome segregation
BDAKENFB_00071 1.8e-256 U Type IV secretory pathway, VirB4
BDAKENFB_00074 6.4e-287 U TraM recognition site of TraD and TraG
BDAKENFB_00080 4.4e-79 bcgIB 2.1.1.72, 3.1.21.3 V Type I restriction modification DNA specificity domain
BDAKENFB_00081 5.1e-278 V N-6 DNA Methylase
BDAKENFB_00082 9.4e-85 pin L Resolvase, N terminal domain
BDAKENFB_00084 1.3e-60 V Psort location Cytoplasmic, score
BDAKENFB_00085 8e-38
BDAKENFB_00087 1.8e-42
BDAKENFB_00089 8.9e-76
BDAKENFB_00091 0.0 XK27_00500 KL Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BDAKENFB_00092 4.9e-60 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
BDAKENFB_00093 7e-220 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
BDAKENFB_00094 0.0 macB_2 V ATPases associated with a variety of cellular activities
BDAKENFB_00095 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
BDAKENFB_00096 3.9e-92 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
BDAKENFB_00097 2.7e-102 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BDAKENFB_00098 4e-270 yhdG E aromatic amino acid transport protein AroP K03293
BDAKENFB_00099 3.1e-289 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BDAKENFB_00100 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
BDAKENFB_00101 7.3e-217 ybiR P Citrate transporter
BDAKENFB_00103 2.3e-176 ydcZ S Putative inner membrane exporter, YdcZ
BDAKENFB_00105 0.0 tetP J Elongation factor G, domain IV
BDAKENFB_00109 5.1e-113 K acetyltransferase
BDAKENFB_00110 1.1e-108 papP E Binding-protein-dependent transport system inner membrane component
BDAKENFB_00111 3.6e-120 E Binding-protein-dependent transport system inner membrane component
BDAKENFB_00112 6.5e-151 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
BDAKENFB_00113 2.6e-142 cjaA ET Bacterial periplasmic substrate-binding proteins
BDAKENFB_00114 2.6e-199 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BDAKENFB_00115 2.1e-141 metQ M NLPA lipoprotein
BDAKENFB_00116 1e-193 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BDAKENFB_00117 4.9e-98 metI P Psort location CytoplasmicMembrane, score 9.99
BDAKENFB_00118 1.7e-221 mtnE 2.6.1.83 E Aminotransferase class I and II
BDAKENFB_00119 3.2e-75 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
BDAKENFB_00120 1.4e-43 XAC3035 O Glutaredoxin
BDAKENFB_00121 3.1e-127 XK27_08050 O prohibitin homologues
BDAKENFB_00122 1.7e-13 S Domain of unknown function (DUF4143)
BDAKENFB_00123 7.4e-75
BDAKENFB_00124 9.6e-135 V ATPases associated with a variety of cellular activities
BDAKENFB_00125 6.3e-146 M Conserved repeat domain
BDAKENFB_00126 1.1e-254 macB_8 V MacB-like periplasmic core domain
BDAKENFB_00127 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BDAKENFB_00128 1.2e-183 adh3 C Zinc-binding dehydrogenase
BDAKENFB_00129 1.1e-84 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BDAKENFB_00130 1.3e-226 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BDAKENFB_00131 2.3e-89 zur P Belongs to the Fur family
BDAKENFB_00132 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
BDAKENFB_00133 2.7e-202 psuK 2.7.1.15, 2.7.1.45, 2.7.1.83 G pfkB family carbohydrate kinase
BDAKENFB_00134 9.1e-189 yeiI 2.7.1.15, 2.7.1.45, 2.7.1.83 G pfkB family carbohydrate kinase
BDAKENFB_00135 1.3e-128 trpF 5.3.1.24 E N-(5'phosphoribosyl)anthranilate (PRA) isomerase
BDAKENFB_00136 6.3e-31 1.1.1.1 C Iron-containing alcohol dehydrogenase
BDAKENFB_00137 3.4e-17 recT L DNA synthesis involved in double-strand break repair via homologous recombination
BDAKENFB_00138 8.8e-60 ssb1 L single-stranded DNA-binding protein
BDAKENFB_00140 4.7e-40
BDAKENFB_00141 6.9e-13
BDAKENFB_00143 3.4e-20
BDAKENFB_00144 1.5e-40
BDAKENFB_00148 4.5e-19 L HNH endonuclease
BDAKENFB_00149 7.8e-40
BDAKENFB_00153 1.3e-16
BDAKENFB_00154 7.3e-98
BDAKENFB_00156 4e-64
BDAKENFB_00157 4.7e-259 S Terminase
BDAKENFB_00158 2.8e-162 S Phage portal protein, SPP1 Gp6-like
BDAKENFB_00159 3.7e-69
BDAKENFB_00160 9.9e-20
BDAKENFB_00161 1.8e-120
BDAKENFB_00164 7.9e-33 S Phage protein Gp19/Gp15/Gp42
BDAKENFB_00165 1.8e-53
BDAKENFB_00166 5.4e-49
BDAKENFB_00167 5.9e-65
BDAKENFB_00168 1.3e-85
BDAKENFB_00169 1.2e-80
BDAKENFB_00170 2e-08
BDAKENFB_00171 0.0 S Phage-related minor tail protein
BDAKENFB_00172 7.2e-150
BDAKENFB_00173 5.9e-227 S Psort location Cytoplasmic, score
BDAKENFB_00175 8.6e-27
BDAKENFB_00176 5e-79 S Psort location Cytoplasmic, score 8.87
BDAKENFB_00177 8.1e-177 3.4.22.70 M Sortase family
BDAKENFB_00178 0.0 inlJ M domain protein
BDAKENFB_00180 1.6e-25
BDAKENFB_00183 1.5e-121 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
BDAKENFB_00184 4e-139 sapF E ATPases associated with a variety of cellular activities
BDAKENFB_00185 7.1e-136 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
BDAKENFB_00186 1.2e-139 EP Binding-protein-dependent transport system inner membrane component
BDAKENFB_00187 2.2e-166 P Binding-protein-dependent transport system inner membrane component
BDAKENFB_00188 1.7e-293 E ABC transporter, substrate-binding protein, family 5
BDAKENFB_00189 2.7e-241 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BDAKENFB_00190 3.5e-33 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
BDAKENFB_00191 8.8e-308 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
BDAKENFB_00192 4.1e-135 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4-amino-5-aminomethyl-2-methylpyrimidine to 4-amino- 5-hydroxymethyl-2-methylpyrimidine (HMP)
BDAKENFB_00194 0.0 cbgA_1 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
BDAKENFB_00195 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BDAKENFB_00196 6.6e-107
BDAKENFB_00197 6.1e-191 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BDAKENFB_00198 4.3e-18 3.2.1.78 GH26 G Glycosyl hydrolase family 26
BDAKENFB_00199 5.8e-126 dedA S SNARE associated Golgi protein
BDAKENFB_00201 8.7e-130 S HAD hydrolase, family IA, variant 3
BDAKENFB_00202 8.6e-47
BDAKENFB_00203 4.5e-115 hspR K transcriptional regulator, MerR family
BDAKENFB_00204 1.7e-174 dnaJ1 O DnaJ molecular chaperone homology domain
BDAKENFB_00205 2.8e-48 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BDAKENFB_00206 0.0 dnaK O Heat shock 70 kDa protein
BDAKENFB_00207 1.3e-145 S Mitochondrial biogenesis AIM24
BDAKENFB_00208 2.3e-57 phoA 3.1.3.1, 3.1.3.39 P Alkaline phosphatase homologues
BDAKENFB_00209 1e-125 S membrane transporter protein
BDAKENFB_00211 8.3e-193 K Psort location Cytoplasmic, score
BDAKENFB_00212 6e-129 traX S TraX protein
BDAKENFB_00213 5.4e-144 S HAD-hyrolase-like
BDAKENFB_00214 2.6e-294 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
BDAKENFB_00215 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
BDAKENFB_00216 4.9e-105 S Protein of unknown function, DUF624
BDAKENFB_00217 4e-153 rafG G ABC transporter permease
BDAKENFB_00218 3.7e-154 msmF G Binding-protein-dependent transport system inner membrane component
BDAKENFB_00219 3.2e-181 K Psort location Cytoplasmic, score
BDAKENFB_00220 1.9e-184 K Periplasmic binding protein-like domain
BDAKENFB_00221 1.4e-264 amyE G Bacterial extracellular solute-binding protein
BDAKENFB_00222 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
BDAKENFB_00223 2.5e-247 amyE G Bacterial extracellular solute-binding protein
BDAKENFB_00224 2.9e-136 G Phosphoglycerate mutase family
BDAKENFB_00225 1.9e-62 S Protein of unknown function (DUF4235)
BDAKENFB_00226 3.9e-142 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
BDAKENFB_00227 3.5e-44
BDAKENFB_00228 6.1e-12 fahA Q Fumarylacetoacetate (FAA) hydrolase family
BDAKENFB_00229 4.4e-104 K Bacterial regulatory proteins, tetR family
BDAKENFB_00230 0.0 lacZ3 3.2.1.23 G Beta-galactosidase trimerisation domain
BDAKENFB_00231 9.4e-115 K Bacterial regulatory proteins, tetR family
BDAKENFB_00232 5.8e-224 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
BDAKENFB_00233 3.2e-101
BDAKENFB_00234 1.8e-141 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BDAKENFB_00235 5e-190 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BDAKENFB_00239 2.9e-61 ydhQ 2.7.11.1 MU cell adhesion
BDAKENFB_00243 5e-11 S Helix-turn-helix domain
BDAKENFB_00244 5.3e-56 S Helix-turn-helix domain
BDAKENFB_00246 9.1e-240 G Bacterial extracellular solute-binding protein
BDAKENFB_00247 1e-128 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
BDAKENFB_00248 4e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
BDAKENFB_00249 0.0 cydD V ABC transporter transmembrane region
BDAKENFB_00250 0.0 fadD 6.2.1.3 I AMP-binding enzyme
BDAKENFB_00251 6.3e-298 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
BDAKENFB_00252 1e-130 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
BDAKENFB_00253 0.0 araB 2.7.1.16, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
BDAKENFB_00254 2.1e-210 K helix_turn _helix lactose operon repressor
BDAKENFB_00255 2.4e-286 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
BDAKENFB_00256 1.4e-189 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
BDAKENFB_00257 1.6e-241 hom 1.1.1.3 E Homoserine dehydrogenase
BDAKENFB_00258 9.1e-300 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
BDAKENFB_00259 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
BDAKENFB_00260 4.8e-271 mmuP E amino acid
BDAKENFB_00261 7e-60 psp1 3.5.99.10 J Endoribonuclease L-PSP
BDAKENFB_00263 1.8e-121 cyaA 4.6.1.1 S CYTH
BDAKENFB_00264 1.2e-169 trxA2 O Tetratricopeptide repeat
BDAKENFB_00265 2.7e-180
BDAKENFB_00266 3.1e-194
BDAKENFB_00267 7e-149 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
BDAKENFB_00268 2.3e-122 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
BDAKENFB_00269 2.3e-44 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
BDAKENFB_00270 5.6e-283 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BDAKENFB_00271 1.6e-163 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BDAKENFB_00272 3.8e-309 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BDAKENFB_00273 4.5e-149 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BDAKENFB_00274 4.4e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BDAKENFB_00275 8.9e-31 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BDAKENFB_00276 2e-146 atpB C it plays a direct role in the translocation of protons across the membrane
BDAKENFB_00277 4.5e-207 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BDAKENFB_00279 3.2e-94 L Phage integrase family
BDAKENFB_00280 2.4e-43 S Ribonuclease toxin, BrnT, of type II toxin-antitoxin system
BDAKENFB_00281 7.2e-38
BDAKENFB_00282 2.2e-28 S Putative phage holin Dp-1
BDAKENFB_00283 8.3e-107 M Glycosyl hydrolases family 25
BDAKENFB_00284 4.7e-17
BDAKENFB_00286 1.1e-85 L reverse transcriptase
BDAKENFB_00287 7.8e-134
BDAKENFB_00288 1.5e-39
BDAKENFB_00291 1.1e-223 S Prophage endopeptidase tail
BDAKENFB_00292 1.8e-67 S phage tail
BDAKENFB_00293 1.1e-83 NT phage tail tape measure protein
BDAKENFB_00294 2.9e-29
BDAKENFB_00295 3.4e-28
BDAKENFB_00296 8.1e-60 eae N domain, Protein
BDAKENFB_00297 1.6e-21
BDAKENFB_00298 6.8e-09
BDAKENFB_00299 7.7e-31
BDAKENFB_00300 7.9e-47 S Phage protein Gp19/Gp15/Gp42
BDAKENFB_00302 5.1e-146 V Phage capsid family
BDAKENFB_00303 3.3e-41
BDAKENFB_00304 3.3e-13
BDAKENFB_00305 3.4e-89
BDAKENFB_00306 9.6e-174 S Phage portal protein, SPP1 Gp6-like
BDAKENFB_00307 4.8e-239 S Terminase
BDAKENFB_00308 1.4e-07
BDAKENFB_00309 2.5e-35 L HNH endonuclease
BDAKENFB_00311 1.5e-19
BDAKENFB_00314 1.5e-08 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
BDAKENFB_00317 1.5e-07
BDAKENFB_00320 4.2e-41 S Protein of unknwon function (DUF3310)
BDAKENFB_00323 3.7e-42 A 3'-to-5' exoribonuclease specific for small oligoribonucleotides
BDAKENFB_00324 6e-30 V HNH endonuclease
BDAKENFB_00327 4.1e-08
BDAKENFB_00328 1.2e-49 ssb1 L Single-stranded DNA-binding protein
BDAKENFB_00332 1.1e-39 O prohibitin homologues
BDAKENFB_00334 6.5e-14
BDAKENFB_00337 5e-273 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
BDAKENFB_00338 5.7e-192 yfdV S Membrane transport protein
BDAKENFB_00339 0.0 oxc 4.1.1.8 EH Thiamine pyrophosphate enzyme, central domain
BDAKENFB_00340 7.1e-175 M LPXTG-motif cell wall anchor domain protein
BDAKENFB_00341 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
BDAKENFB_00342 3.4e-91 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
BDAKENFB_00343 9.4e-98 mntP P Probably functions as a manganese efflux pump
BDAKENFB_00344 4.9e-134
BDAKENFB_00345 4.9e-134 KT Transcriptional regulatory protein, C terminal
BDAKENFB_00346 3.2e-123 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BDAKENFB_00347 4.6e-288 E Bacterial extracellular solute-binding proteins, family 5 Middle
BDAKENFB_00348 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
BDAKENFB_00349 0.0 S domain protein
BDAKENFB_00350 1.1e-68 tyrA 5.4.99.5 E Chorismate mutase type II
BDAKENFB_00351 3.7e-79 K helix_turn_helix ASNC type
BDAKENFB_00352 1.9e-247 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BDAKENFB_00353 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
BDAKENFB_00354 2.1e-51 S Protein of unknown function (DUF2469)
BDAKENFB_00355 2e-205 2.3.1.57 J Acetyltransferase (GNAT) domain
BDAKENFB_00356 8.7e-284 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BDAKENFB_00357 5.5e-286 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
BDAKENFB_00358 1.2e-46 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BDAKENFB_00359 4e-39 S G5
BDAKENFB_00360 2e-166 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
BDAKENFB_00361 9.6e-169 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
BDAKENFB_00362 2.6e-109 S LytR cell envelope-related transcriptional attenuator
BDAKENFB_00363 1.7e-284 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
BDAKENFB_00364 1.8e-121 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
BDAKENFB_00365 0.0 M Conserved repeat domain
BDAKENFB_00366 3.9e-304 murJ KLT MviN-like protein
BDAKENFB_00367 0.0 murJ KLT MviN-like protein
BDAKENFB_00368 1e-159 S Domain of unknown function (DUF4143)
BDAKENFB_00369 8.3e-119 yorS 3.1.3.5 S 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
BDAKENFB_00371 7e-14 S Psort location Extracellular, score 8.82
BDAKENFB_00372 5.9e-180 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
BDAKENFB_00373 6.8e-203 parB K Belongs to the ParB family
BDAKENFB_00374 1.4e-170 parA D CobQ CobB MinD ParA nucleotide binding domain protein
BDAKENFB_00375 1.7e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
BDAKENFB_00376 3.6e-91 jag S Putative single-stranded nucleic acids-binding domain
BDAKENFB_00377 3.9e-190 yidC U Membrane protein insertase, YidC Oxa1 family
BDAKENFB_00378 1.5e-43 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
BDAKENFB_00379 5.9e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
BDAKENFB_00380 2.5e-305 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BDAKENFB_00381 3e-204 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
BDAKENFB_00382 1.3e-235 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BDAKENFB_00383 6.2e-90 S Protein of unknown function (DUF721)
BDAKENFB_00384 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BDAKENFB_00385 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BDAKENFB_00386 3.3e-68 S Transmembrane domain of unknown function (DUF3566)
BDAKENFB_00387 1.2e-260 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
BDAKENFB_00388 2.9e-58 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
BDAKENFB_00392 9.1e-100 S Protein of unknown function DUF45
BDAKENFB_00393 2.6e-188 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
BDAKENFB_00394 2.8e-241 ytfL P Transporter associated domain
BDAKENFB_00395 2e-118 cah 4.2.1.1 P Reversible hydration of carbon dioxide
BDAKENFB_00396 5e-181
BDAKENFB_00397 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
BDAKENFB_00398 0.0 yjjP S Threonine/Serine exporter, ThrE
BDAKENFB_00399 9.4e-300 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BDAKENFB_00400 5.9e-205 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
BDAKENFB_00401 1.4e-41 S Protein of unknown function (DUF3073)
BDAKENFB_00402 1.7e-63 I Sterol carrier protein
BDAKENFB_00403 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
BDAKENFB_00404 1.9e-33
BDAKENFB_00405 3.6e-143 gluP 3.4.21.105 S Rhomboid family
BDAKENFB_00406 4.2e-270 L ribosomal rna small subunit methyltransferase
BDAKENFB_00407 7.3e-67 crgA D Involved in cell division
BDAKENFB_00408 5.7e-130 S Bacterial protein of unknown function (DUF881)
BDAKENFB_00409 1.5e-205 srtA 3.4.22.70 M Sortase family
BDAKENFB_00410 1.9e-115 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
BDAKENFB_00411 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
BDAKENFB_00412 4.5e-177 T Protein tyrosine kinase
BDAKENFB_00413 3e-265 pbpA M penicillin-binding protein
BDAKENFB_00414 2.1e-269 rodA D Belongs to the SEDS family
BDAKENFB_00415 6.8e-242 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
BDAKENFB_00416 9.6e-73 fhaB T Inner membrane component of T3SS, cytoplasmic domain
BDAKENFB_00417 1.2e-131 fhaA T Protein of unknown function (DUF2662)
BDAKENFB_00418 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
BDAKENFB_00419 9.6e-39 2.7.13.3 T Histidine kinase
BDAKENFB_00420 4.3e-151 2.7.13.3 T Histidine kinase
BDAKENFB_00421 3.2e-113 K helix_turn_helix, Lux Regulon
BDAKENFB_00422 3.9e-193 pldB 3.1.1.5 I Serine aminopeptidase, S33
BDAKENFB_00423 8.8e-160 yicL EG EamA-like transporter family
BDAKENFB_00424 5.4e-86 XK27_10430 S NAD(P)H-binding
BDAKENFB_00425 7.8e-44 ydeP K HxlR-like helix-turn-helix
BDAKENFB_00428 9.4e-269 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
BDAKENFB_00429 3.2e-286 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
BDAKENFB_00430 0.0 cadA P E1-E2 ATPase
BDAKENFB_00431 3e-187 ansA 3.5.1.1 EJ Asparaginase
BDAKENFB_00432 3.1e-270 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
BDAKENFB_00433 2.7e-170 htpX O Belongs to the peptidase M48B family
BDAKENFB_00435 3.8e-187 K Helix-turn-helix XRE-family like proteins
BDAKENFB_00436 6.3e-171 yddG EG EamA-like transporter family
BDAKENFB_00437 0.0 pip S YhgE Pip domain protein
BDAKENFB_00438 0.0 pip S YhgE Pip domain protein
BDAKENFB_00439 1.6e-205 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
BDAKENFB_00440 1.7e-248 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BDAKENFB_00441 1.1e-297 clcA P Voltage gated chloride channel
BDAKENFB_00442 3.1e-149 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BDAKENFB_00443 3.3e-57 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BDAKENFB_00444 5.4e-29 E Receptor family ligand binding region
BDAKENFB_00445 1.1e-195 K helix_turn _helix lactose operon repressor
BDAKENFB_00446 4.5e-296 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
BDAKENFB_00447 1.5e-115 S Protein of unknown function, DUF624
BDAKENFB_00448 0.0 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
BDAKENFB_00449 7.3e-223 G Bacterial extracellular solute-binding protein
BDAKENFB_00450 2.4e-161 amyD3 P Binding-protein-dependent transport system inner membrane component
BDAKENFB_00451 1.6e-149 amyC5 P Binding-protein-dependent transport system inner membrane component
BDAKENFB_00452 3.1e-279 scrT G Transporter major facilitator family protein
BDAKENFB_00453 1.5e-242 yhjE EGP Sugar (and other) transporter
BDAKENFB_00454 1.5e-202 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BDAKENFB_00455 3.4e-202 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BDAKENFB_00456 0.0 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
BDAKENFB_00457 1.8e-154 E GDSL-like Lipase/Acylhydrolase family
BDAKENFB_00458 5.9e-255 bglA 3.2.1.21 G Glycosyl hydrolase family 1
BDAKENFB_00459 8.1e-220 G Bacterial extracellular solute-binding protein
BDAKENFB_00460 2e-170 ycjO_3 U Binding-protein-dependent transport system inner membrane component
BDAKENFB_00461 6.4e-141 malG U Binding-protein-dependent transport system inner membrane component
BDAKENFB_00462 0.0 3.2.1.25 G beta-mannosidase
BDAKENFB_00463 3.6e-180 K helix_turn _helix lactose operon repressor
BDAKENFB_00464 1.7e-84 S Protein of unknown function, DUF624
BDAKENFB_00465 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
BDAKENFB_00466 3.5e-100
BDAKENFB_00467 9.8e-270 aroP E aromatic amino acid transport protein AroP K03293
BDAKENFB_00468 0.0 V FtsX-like permease family
BDAKENFB_00469 3.3e-227 P Sodium/hydrogen exchanger family
BDAKENFB_00470 7.7e-249 metY 2.5.1.49 H Psort location Cytoplasmic, score 9.98
BDAKENFB_00471 3.6e-265 xylA 5.3.1.5 G Belongs to the xylose isomerase family
BDAKENFB_00472 0.0 3.2.1.37, 3.2.1.55 GH43,GH51 G Belongs to the glycosyl hydrolase 43 family
BDAKENFB_00473 1.2e-183 K Bacterial regulatory proteins, lacI family
BDAKENFB_00474 4.7e-238 msmE G ABC transporter periplasmic binding protein YcjN precursor K02027
BDAKENFB_00475 1.5e-186 MA20_14025 U Binding-protein-dependent transport system inner membrane component
BDAKENFB_00476 4.1e-164 MA20_14020 P Binding-protein-dependent transport system inner membrane component
BDAKENFB_00477 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
BDAKENFB_00478 0.0 3.1.1.53 G Glycosyl hydrolase family 2, sugar binding domain protein
BDAKENFB_00479 2.1e-106 lacA 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
BDAKENFB_00480 3.6e-285 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
BDAKENFB_00481 5.7e-225 xylR GK ROK family
BDAKENFB_00483 1.5e-35 rpmE J Binds the 23S rRNA
BDAKENFB_00484 1.4e-190 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BDAKENFB_00485 3.2e-172 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
BDAKENFB_00486 2.7e-219 livK E Receptor family ligand binding region
BDAKENFB_00487 9.5e-156 U Belongs to the binding-protein-dependent transport system permease family
BDAKENFB_00488 2.2e-194 livM U Belongs to the binding-protein-dependent transport system permease family
BDAKENFB_00489 4.8e-151 E Branched-chain amino acid ATP-binding cassette transporter
BDAKENFB_00490 1.9e-124 livF E ATPases associated with a variety of cellular activities
BDAKENFB_00491 1.4e-113 ywlC 2.7.7.87 J Belongs to the SUA5 family
BDAKENFB_00492 1.1e-193 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
BDAKENFB_00493 2.2e-287 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
BDAKENFB_00494 3.1e-121 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
BDAKENFB_00495 4.5e-163 supH S Sucrose-6F-phosphate phosphohydrolase
BDAKENFB_00496 1e-270 recD2 3.6.4.12 L PIF1-like helicase
BDAKENFB_00497 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
BDAKENFB_00498 1.4e-98 L Single-strand binding protein family
BDAKENFB_00499 0.0 pepO 3.4.24.71 O Peptidase family M13
BDAKENFB_00500 1.6e-151 map 3.4.11.18 E Methionine aminopeptidase
BDAKENFB_00501 5.4e-250 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
BDAKENFB_00502 2.9e-142 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
BDAKENFB_00503 9.8e-80 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BDAKENFB_00504 1.1e-190 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BDAKENFB_00505 2.3e-168 ftsE D Cell division ATP-binding protein FtsE
BDAKENFB_00506 3.4e-161 ftsX D Part of the ABC transporter FtsEX involved in cellular division
BDAKENFB_00507 8.9e-150 usp 3.5.1.28 CBM50 D CHAP domain protein
BDAKENFB_00508 2e-77 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
BDAKENFB_00509 3e-157 pknD ET ABC transporter, substrate-binding protein, family 3
BDAKENFB_00510 7.5e-63 pknD ET ABC transporter, substrate-binding protein, family 3
BDAKENFB_00511 5.4e-151 pknD ET ABC transporter, substrate-binding protein, family 3
BDAKENFB_00512 2.2e-126 yecS E Binding-protein-dependent transport system inner membrane component
BDAKENFB_00513 8.5e-145 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
BDAKENFB_00514 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
BDAKENFB_00515 9.5e-146 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
BDAKENFB_00516 9e-229 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
BDAKENFB_00517 1.4e-189 K Periplasmic binding protein domain
BDAKENFB_00520 1.1e-236 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
BDAKENFB_00521 6.5e-251 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BDAKENFB_00522 1e-139 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
BDAKENFB_00523 1.2e-120 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BDAKENFB_00524 3.2e-77 soxR K MerR, DNA binding
BDAKENFB_00525 4.6e-196 yghZ C Aldo/keto reductase family
BDAKENFB_00526 4.2e-58 S Protein of unknown function (DUF3039)
BDAKENFB_00527 7.7e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BDAKENFB_00528 4.2e-133
BDAKENFB_00529 1.8e-113 yceD S Uncharacterized ACR, COG1399
BDAKENFB_00530 1e-19 rpmF J Belongs to the bacterial ribosomal protein bL32 family
BDAKENFB_00531 2.2e-135 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
BDAKENFB_00532 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
BDAKENFB_00533 5.7e-92 ilvN 2.2.1.6 E ACT domain
BDAKENFB_00534 7.6e-97
BDAKENFB_00535 0.0 yjjK S ABC transporter
BDAKENFB_00536 1.1e-152 guaA1 6.3.5.2 F Peptidase C26
BDAKENFB_00537 2.1e-302 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
BDAKENFB_00538 1.6e-94
BDAKENFB_00540 2.7e-270 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BDAKENFB_00541 4e-179 S Endonuclease/Exonuclease/phosphatase family
BDAKENFB_00542 3.9e-54 rpsP J Belongs to the bacterial ribosomal protein bS16 family
BDAKENFB_00543 1.8e-34 CP_0960 S Belongs to the UPF0109 family
BDAKENFB_00544 3.6e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BDAKENFB_00545 2.5e-148 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
BDAKENFB_00546 2.1e-148 I alpha/beta hydrolase fold
BDAKENFB_00547 5.4e-138 uhpT EGP Major facilitator Superfamily
BDAKENFB_00548 1.5e-90 K helix_turn_helix, arabinose operon control protein
BDAKENFB_00549 4.7e-100 rsmD 2.1.1.171 L Conserved hypothetical protein 95
BDAKENFB_00550 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
BDAKENFB_00551 8.4e-30 rpmB J Ribosomal L28 family
BDAKENFB_00552 0.0 S Psort location Cytoplasmic, score 8.87
BDAKENFB_00553 4.9e-230 yxiO S Vacuole effluxer Atg22 like
BDAKENFB_00554 1.9e-127 gntR K FCD
BDAKENFB_00555 5.6e-79 gntK 2.7.1.12 F Shikimate kinase
BDAKENFB_00556 6e-228 gnuT EG GntP family permease
BDAKENFB_00558 5.2e-167 gnd 1.1.1.343, 1.1.1.44 G 6-phosphogluconate dehydrogenase, C-terminal domain
BDAKENFB_00559 1.6e-232 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
BDAKENFB_00560 4.5e-123 K Bacterial regulatory proteins, tetR family
BDAKENFB_00561 2.4e-228 MA20_36090 S Psort location Cytoplasmic, score 8.87
BDAKENFB_00562 3.8e-229 MA20_36090 S Psort location Cytoplasmic, score 8.87
BDAKENFB_00563 1.7e-137 M Mechanosensitive ion channel
BDAKENFB_00564 2.4e-177 S CAAX protease self-immunity
BDAKENFB_00565 2.2e-218 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
BDAKENFB_00566 1.7e-179 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
BDAKENFB_00567 5.5e-177 plsC2 2.3.1.51 I Phosphate acyltransferases
BDAKENFB_00568 1e-256 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BDAKENFB_00569 3.6e-200 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
BDAKENFB_00570 1.3e-131 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BDAKENFB_00571 7.1e-272 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BDAKENFB_00572 1.1e-139 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
BDAKENFB_00573 1.5e-267 S Calcineurin-like phosphoesterase
BDAKENFB_00576 5.5e-297 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BDAKENFB_00577 8.5e-113 S Protein of unknown function (DUF805)
BDAKENFB_00578 6.1e-88 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BDAKENFB_00579 4.3e-44 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BDAKENFB_00580 4.2e-250 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BDAKENFB_00581 2.4e-278 thrC 4.2.3.1 E Threonine synthase N terminus
BDAKENFB_00582 9.9e-215 EGP Major facilitator Superfamily
BDAKENFB_00583 2.3e-105 3.1.3.27 E haloacid dehalogenase-like hydrolase
BDAKENFB_00584 2.1e-173 G Fic/DOC family
BDAKENFB_00585 7.7e-145
BDAKENFB_00586 3.4e-163 IQ Enoyl-(Acyl carrier protein) reductase
BDAKENFB_00587 1.1e-160 S Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BDAKENFB_00588 2.3e-93 bcp 1.11.1.15 O Redoxin
BDAKENFB_00589 2.6e-22 S Psort location Cytoplasmic, score 8.87
BDAKENFB_00590 8.1e-94 S Pyridoxamine 5'-phosphate oxidase
BDAKENFB_00591 0.0 S Histidine phosphatase superfamily (branch 2)
BDAKENFB_00592 1.7e-58 K helix_turn_helix gluconate operon transcriptional repressor
BDAKENFB_00593 2e-174 V ATPases associated with a variety of cellular activities
BDAKENFB_00594 2.6e-116 S ABC-2 family transporter protein
BDAKENFB_00595 2.2e-122 S Haloacid dehalogenase-like hydrolase
BDAKENFB_00596 1.2e-260 recN L May be involved in recombinational repair of damaged DNA
BDAKENFB_00597 2e-177 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BDAKENFB_00598 4.6e-29 trkB P Cation transport protein
BDAKENFB_00599 3.6e-87 trkB P Cation transport protein
BDAKENFB_00600 3.8e-168 3.4.22.70 M Sortase family
BDAKENFB_00603 0.0 M cell wall anchor domain protein
BDAKENFB_00604 1.3e-229 aspB E Aminotransferase class-V
BDAKENFB_00605 1.9e-70 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
BDAKENFB_00606 9.9e-183 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
BDAKENFB_00607 0.0 helD 3.6.4.12 L Psort location Cytoplasmic, score 8.87
BDAKENFB_00608 6.7e-198 V Domain of unknown function (DUF3427)
BDAKENFB_00609 1.5e-76
BDAKENFB_00610 2e-71 S Bacterial PH domain
BDAKENFB_00611 6.7e-248 S zinc finger
BDAKENFB_00612 0.0 pknL 2.7.11.1 KLT PASTA
BDAKENFB_00613 1.4e-195 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
BDAKENFB_00614 1.1e-118
BDAKENFB_00615 3.4e-173 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
BDAKENFB_00616 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
BDAKENFB_00617 1.5e-222 G Major Facilitator Superfamily
BDAKENFB_00618 2.5e-242 T PhoQ Sensor
BDAKENFB_00619 2.4e-79 S Protein of unknown function (DUF2975)
BDAKENFB_00620 2.2e-31 yozG K Cro/C1-type HTH DNA-binding domain
BDAKENFB_00621 0.0 lhr L DEAD DEAH box helicase
BDAKENFB_00622 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
BDAKENFB_00623 1.2e-230 S Type I phosphodiesterase / nucleotide pyrophosphatase
BDAKENFB_00624 7e-147 S Protein of unknown function (DUF3071)
BDAKENFB_00625 1e-47 S Domain of unknown function (DUF4193)
BDAKENFB_00626 1.3e-84 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
BDAKENFB_00627 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BDAKENFB_00628 2.7e-102 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BDAKENFB_00629 5e-241 dinF V MatE
BDAKENFB_00630 3.6e-111 S Sucrose-6F-phosphate phosphohydrolase
BDAKENFB_00632 3.7e-150 metQ P NLPA lipoprotein
BDAKENFB_00633 3.5e-176 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BDAKENFB_00634 3.1e-95 metI P Binding-protein-dependent transport system inner membrane component
BDAKENFB_00635 3.6e-213 S Peptidase dimerisation domain
BDAKENFB_00636 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BDAKENFB_00637 1.3e-30
BDAKENFB_00638 2.4e-294 S Amidohydrolase family
BDAKENFB_00639 4.2e-77 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
BDAKENFB_00640 1.9e-155 ribD 1.1.1.193, 3.5.4.26 H Cytidine and deoxycytidylate deaminase zinc-binding region
BDAKENFB_00641 3.9e-72 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
BDAKENFB_00642 3.8e-181 V Beta-lactamase
BDAKENFB_00643 0.0 yjjK S ATP-binding cassette protein, ChvD family
BDAKENFB_00644 1.1e-169 tesB I Thioesterase-like superfamily
BDAKENFB_00645 6.6e-96 S Protein of unknown function (DUF3180)
BDAKENFB_00646 2.2e-287 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BDAKENFB_00647 1.1e-161 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BDAKENFB_00648 8.1e-114 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
BDAKENFB_00649 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BDAKENFB_00650 3.9e-99 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
BDAKENFB_00651 8.5e-204 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
BDAKENFB_00652 1.2e-250 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
BDAKENFB_00653 1.8e-231 epsG M Glycosyl transferase family 21
BDAKENFB_00654 1e-231 S AI-2E family transporter
BDAKENFB_00655 1.5e-180 3.4.14.13 M Glycosyltransferase like family 2
BDAKENFB_00656 3.4e-203 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
BDAKENFB_00657 0.0 yliE T Putative diguanylate phosphodiesterase
BDAKENFB_00658 1.8e-108 S Domain of unknown function (DUF4956)
BDAKENFB_00659 7.6e-157 P VTC domain
BDAKENFB_00660 4.7e-308 cotH M CotH kinase protein
BDAKENFB_00661 6.2e-285 pelG S Putative exopolysaccharide Exporter (EPS-E)
BDAKENFB_00662 3.2e-283 pelF GT4 M Domain of unknown function (DUF3492)
BDAKENFB_00663 0.0 S Uncharacterised protein conserved in bacteria (DUF2194)
BDAKENFB_00664 3.2e-133
BDAKENFB_00665 9.8e-13
BDAKENFB_00666 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
BDAKENFB_00670 1.1e-155 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
BDAKENFB_00671 1.2e-199 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
BDAKENFB_00673 2.5e-86 ptpA 3.1.3.48 T low molecular weight
BDAKENFB_00674 1.3e-127 folA 1.5.1.3 H dihydrofolate reductase
BDAKENFB_00675 1.6e-179 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BDAKENFB_00676 2e-73 attW O OsmC-like protein
BDAKENFB_00677 4.3e-189 T Universal stress protein family
BDAKENFB_00678 2.4e-104 M NlpC/P60 family
BDAKENFB_00679 3.1e-162 usp 3.5.1.28 CBM50 S CHAP domain
BDAKENFB_00680 4.5e-216 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BDAKENFB_00681 6.2e-41
BDAKENFB_00682 7e-184
BDAKENFB_00683 1.5e-123 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
BDAKENFB_00684 2.1e-263 EGP Major facilitator Superfamily
BDAKENFB_00685 1.4e-95 S GtrA-like protein
BDAKENFB_00686 6.7e-62 S Macrophage migration inhibitory factor (MIF)
BDAKENFB_00687 9.1e-289 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
BDAKENFB_00688 0.0 pepD E Peptidase family C69
BDAKENFB_00689 1.1e-106 S Phosphatidylethanolamine-binding protein
BDAKENFB_00690 4.6e-286 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BDAKENFB_00691 6e-39 ptsH G PTS HPr component phosphorylation site
BDAKENFB_00692 1.9e-181 K helix_turn _helix lactose operon repressor
BDAKENFB_00693 2.3e-191 holB 2.7.7.7 L DNA polymerase III
BDAKENFB_00694 6.6e-111 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BDAKENFB_00695 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BDAKENFB_00696 8.7e-191 3.6.1.27 I PAP2 superfamily
BDAKENFB_00697 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
BDAKENFB_00698 9.6e-166 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BDAKENFB_00699 3.3e-79 S Protein of unknown function (DUF3000)
BDAKENFB_00700 5.1e-248 rnd 3.1.13.5 J 3'-5' exonuclease
BDAKENFB_00701 1.7e-230 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
BDAKENFB_00702 2.2e-134 yebE S DUF218 domain
BDAKENFB_00703 1.1e-127 E Psort location Cytoplasmic, score 8.87
BDAKENFB_00704 2.5e-35 yebE S DUF218 domain
BDAKENFB_00705 3.3e-08 yebE S DUF218 domain
BDAKENFB_00706 5e-86 ykoE S ABC-type cobalt transport system, permease component
BDAKENFB_00707 2.1e-146 S phosphoesterase or phosphohydrolase
BDAKENFB_00708 1.1e-06 S zinc finger
BDAKENFB_00709 4.5e-23 L Nuclease-related domain
BDAKENFB_00710 7.4e-75 S Nucleotidyltransferase domain
BDAKENFB_00711 1.8e-63 S Protein of unknown function DUF86
BDAKENFB_00713 2.1e-07 XK26_04895
BDAKENFB_00714 5.4e-67 XK26_04895
BDAKENFB_00715 1.6e-62 tnp7109-21 L Integrase core domain
BDAKENFB_00716 2.3e-116 L Integrase core domain
BDAKENFB_00717 3.9e-39 L Psort location Cytoplasmic, score 8.87
BDAKENFB_00718 4.6e-118 L PFAM Relaxase mobilization nuclease family protein
BDAKENFB_00719 2.8e-199 V AAA domain, putative AbiEii toxin, Type IV TA system
BDAKENFB_00720 5.4e-142 S ABC-2 family transporter protein
BDAKENFB_00721 1.1e-137
BDAKENFB_00722 6.7e-60
BDAKENFB_00724 2.4e-237 T Histidine kinase
BDAKENFB_00725 1.2e-120 K helix_turn_helix, Lux Regulon
BDAKENFB_00726 3e-11 S Type-A lantibiotic
BDAKENFB_00728 5.4e-94 spaC2 V Domain of unknown function (DUF4135)
BDAKENFB_00729 5.1e-133 lagD V Peptidase C39 family
BDAKENFB_00731 3e-97 L IstB-like ATP binding protein
BDAKENFB_00732 8.9e-114 L PFAM Integrase catalytic
BDAKENFB_00733 2.1e-130 L PFAM Integrase catalytic
BDAKENFB_00734 4.1e-59 L PFAM Integrase catalytic
BDAKENFB_00736 3.1e-76 S AIPR protein
BDAKENFB_00737 1.8e-21 S AIPR protein
BDAKENFB_00738 3.2e-22
BDAKENFB_00739 1.2e-44 S Putative inner membrane protein (DUF1819)
BDAKENFB_00740 6.9e-40 lexA 3.6.4.12 K Putative DNA-binding domain
BDAKENFB_00743 8.1e-54 mazG S MazG-like family
BDAKENFB_00744 9.2e-271 L Uncharacterized conserved protein (DUF2075)
BDAKENFB_00746 2.9e-113 3.2.1.8 S alpha beta
BDAKENFB_00747 1e-84 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
BDAKENFB_00748 4.5e-188 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BDAKENFB_00749 1.7e-104 kcsA U Ion channel
BDAKENFB_00751 2.1e-145 L Excalibur calcium-binding domain
BDAKENFB_00752 1.6e-268 pepC 3.4.22.40 E Peptidase C1-like family
BDAKENFB_00753 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
BDAKENFB_00754 3.9e-108 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BDAKENFB_00755 0.0 ecfA GP ABC transporter, ATP-binding protein
BDAKENFB_00756 8.9e-10 hutI Q Amidohydrolase family
BDAKENFB_00757 1.6e-46 yhbY J CRS1_YhbY
BDAKENFB_00758 1.4e-144 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BDAKENFB_00760 7.6e-199 S Glycosyltransferase, group 2 family protein
BDAKENFB_00761 1.6e-140 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
BDAKENFB_00762 4e-220 E Aminotransferase class I and II
BDAKENFB_00763 5e-145 bioM P ATPases associated with a variety of cellular activities
BDAKENFB_00764 7.3e-308 2.8.2.22 S Arylsulfotransferase Ig-like domain
BDAKENFB_00765 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BDAKENFB_00766 0.0 S Tetratricopeptide repeat
BDAKENFB_00767 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BDAKENFB_00768 2.6e-211 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
BDAKENFB_00769 2.2e-84 ykoE S ABC-type cobalt transport system, permease component
BDAKENFB_00770 2.3e-268 ykoD P ATPases associated with a variety of cellular activities
BDAKENFB_00771 1.2e-144 cbiQ P Cobalt transport protein
BDAKENFB_00772 9.4e-253 argE E Peptidase dimerisation domain
BDAKENFB_00773 3.6e-93 S Protein of unknown function (DUF3043)
BDAKENFB_00774 8.4e-247 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BDAKENFB_00775 6e-143 S Domain of unknown function (DUF4191)
BDAKENFB_00776 7.8e-282 glnA 6.3.1.2 E glutamine synthetase
BDAKENFB_00777 4e-42 V DNA modification
BDAKENFB_00778 8.3e-113 ung2 3.2.2.27 L Uracil DNA glycosylase superfamily
BDAKENFB_00779 1.5e-17 L HNH endonuclease
BDAKENFB_00781 4.5e-18
BDAKENFB_00782 1.3e-96 yvdD 3.2.2.10 S Possible lysine decarboxylase
BDAKENFB_00783 3.3e-158 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BDAKENFB_00784 2.4e-203 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BDAKENFB_00785 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
BDAKENFB_00786 3.2e-98
BDAKENFB_00787 9.1e-206 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BDAKENFB_00788 8.8e-215 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
BDAKENFB_00789 2.8e-179 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
BDAKENFB_00790 1e-240 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
BDAKENFB_00791 4.6e-185 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BDAKENFB_00792 2.3e-82 argR K Regulates arginine biosynthesis genes
BDAKENFB_00793 3e-237 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
BDAKENFB_00794 1.3e-279 argH 4.3.2.1 E argininosuccinate lyase
BDAKENFB_00795 3.6e-81 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
BDAKENFB_00796 8.6e-137 S Putative ABC-transporter type IV
BDAKENFB_00797 0.0 S Protein of unknown function (DUF975)
BDAKENFB_00798 1.4e-250 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BDAKENFB_00799 1.5e-149 L Tetratricopeptide repeat
BDAKENFB_00800 1.1e-192 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
BDAKENFB_00801 2.9e-134 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
BDAKENFB_00802 3e-116 trkA P TrkA-N domain
BDAKENFB_00803 6.8e-39 trkB P Cation transport protein
BDAKENFB_00804 2e-12 glf 5.4.99.9 M UDP-galactopyranose mutase
BDAKENFB_00805 2.7e-216 ino1 5.5.1.4 I Myo-inositol-1-phosphate synthase
BDAKENFB_00806 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
BDAKENFB_00807 0.0 S Beta-L-arabinofuranosidase, GH127
BDAKENFB_00808 1.9e-156 U Binding-protein-dependent transport system inner membrane component
BDAKENFB_00809 9.1e-170 G Binding-protein-dependent transport system inner membrane component
BDAKENFB_00810 2.9e-243 G Bacterial extracellular solute-binding protein
BDAKENFB_00811 3.5e-204 abf G Glycosyl hydrolases family 43
BDAKENFB_00812 6e-194 K helix_turn _helix lactose operon repressor
BDAKENFB_00813 0.0 3.2.1.97 GH101 G Glycosyl hydrolases family 43
BDAKENFB_00814 0.0 3.2.1.99 GH43 G C-terminal of Glycosyl hydrolases family 43
BDAKENFB_00815 0.0 3.2.1.99 GH43 G C-terminal of Glycosyl hydrolases family 43
BDAKENFB_00816 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BDAKENFB_00817 1.1e-297 S Calcineurin-like phosphoesterase
BDAKENFB_00818 7.1e-115
BDAKENFB_00819 3.8e-40
BDAKENFB_00820 1e-45 K helix_turn_helix, Lux Regulon
BDAKENFB_00821 6.7e-07 2.7.13.3 T Histidine kinase
BDAKENFB_00822 1.3e-23 S Protein of unknown function (DUF1778)
BDAKENFB_00823 5.9e-46 K Acetyltransferase (GNAT) family
BDAKENFB_00825 2.7e-159 K Periplasmic binding protein domain
BDAKENFB_00826 1e-126 G Binding-protein-dependent transport system inner membrane component
BDAKENFB_00827 5.7e-156 malC G Binding-protein-dependent transport system inner membrane component
BDAKENFB_00828 4.1e-232 G Bacterial extracellular solute-binding protein
BDAKENFB_00829 1.9e-271 rafA 3.2.1.22 G Psort location Cytoplasmic, score 8.87
BDAKENFB_00830 0.0 3.2.1.22 G lipolytic protein G-D-S-L family
BDAKENFB_00832 1.8e-209 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BDAKENFB_00833 1.4e-96 askB 1.1.1.3, 2.7.2.4 E ACT domain
BDAKENFB_00834 3.4e-135 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
BDAKENFB_00835 2.2e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BDAKENFB_00836 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
BDAKENFB_00837 1.1e-96 K Bacterial regulatory proteins, tetR family
BDAKENFB_00838 1.6e-193 S Psort location CytoplasmicMembrane, score
BDAKENFB_00839 1.9e-214 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
BDAKENFB_00840 1.1e-54 S TIGRFAM helicase secretion neighborhood TadE-like protein
BDAKENFB_00841 5.1e-60 U TadE-like protein
BDAKENFB_00842 1.3e-42 S Protein of unknown function (DUF4244)
BDAKENFB_00843 7.4e-89 gspF NU Type II secretion system (T2SS), protein F
BDAKENFB_00844 1.4e-125 U Type ii secretion system
BDAKENFB_00845 2.7e-185 cpaF U Type II IV secretion system protein
BDAKENFB_00846 5.5e-141 cpaE D bacterial-type flagellum organization
BDAKENFB_00848 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BDAKENFB_00849 1.1e-206 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
BDAKENFB_00850 2.8e-89
BDAKENFB_00851 2.7e-117 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BDAKENFB_00852 2.7e-207 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
BDAKENFB_00853 0.0 G Bacterial Ig-like domain (group 4)
BDAKENFB_00854 0.0 sca1 3.2.1.187 GH121 DG Bacterial Ig-like domain (group 4)
BDAKENFB_00855 0.0 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
BDAKENFB_00856 9.3e-147 G Binding-protein-dependent transport system inner membrane component
BDAKENFB_00857 3.1e-167 P Binding-protein-dependent transport system inner membrane component
BDAKENFB_00858 4e-07 P Binding-protein-dependent transport system inner membrane component
BDAKENFB_00859 2.5e-242 G Bacterial extracellular solute-binding protein
BDAKENFB_00860 9.1e-192 K Periplasmic binding protein domain
BDAKENFB_00861 0.0 ubiB S ABC1 family
BDAKENFB_00862 1e-27 S granule-associated protein
BDAKENFB_00863 2.1e-137 cobQ S CobB/CobQ-like glutamine amidotransferase domain
BDAKENFB_00864 4.3e-251 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
BDAKENFB_00865 3.3e-248 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
BDAKENFB_00866 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
BDAKENFB_00867 1e-54 glnB K Nitrogen regulatory protein P-II
BDAKENFB_00868 1.2e-236 amt U Ammonium Transporter Family
BDAKENFB_00869 1.5e-172 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
BDAKENFB_00870 1.1e-107 icaR K Bacterial regulatory proteins, tetR family
BDAKENFB_00872 4e-195 XK27_01805 M Glycosyltransferase like family 2
BDAKENFB_00873 2.8e-310 pepD E Peptidase family C69
BDAKENFB_00875 6e-38 nrdH O Glutaredoxin
BDAKENFB_00876 1.2e-225 S Putative ABC-transporter type IV
BDAKENFB_00877 0.0 pip S YhgE Pip domain protein
BDAKENFB_00878 7e-274 pip S YhgE Pip domain protein
BDAKENFB_00879 2.1e-88 K Psort location Cytoplasmic, score 8.87
BDAKENFB_00880 1.1e-61 S FMN_bind
BDAKENFB_00881 2.6e-149 macB V ABC transporter, ATP-binding protein
BDAKENFB_00882 1.3e-200 Z012_06715 V FtsX-like permease family
BDAKENFB_00884 2.3e-219 macB_2 V ABC transporter permease
BDAKENFB_00885 4.2e-231 S Predicted membrane protein (DUF2318)
BDAKENFB_00886 4.1e-92 tpd P Fe2+ transport protein
BDAKENFB_00887 5.8e-295 efeU_1 P Iron permease FTR1 family
BDAKENFB_00888 2e-237 G MFS/sugar transport protein
BDAKENFB_00889 1.4e-117 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
BDAKENFB_00890 0.0 lmrA2 V ABC transporter transmembrane region
BDAKENFB_00891 3.5e-285 lmrA1 V ABC transporter, ATP-binding protein
BDAKENFB_00892 1.1e-57 ydgJ K helix_turn_helix multiple antibiotic resistance protein
BDAKENFB_00893 1.7e-155 1.1.1.65 C Aldo/keto reductase family
BDAKENFB_00894 2.5e-26 thiS 2.8.1.10 H ThiS family
BDAKENFB_00895 8.4e-128 thiF 2.7.7.73, 2.7.7.80 H ThiF family
BDAKENFB_00896 1.2e-166 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
BDAKENFB_00897 9.9e-275 cycA E Amino acid permease
BDAKENFB_00898 1.5e-18
BDAKENFB_00899 1.1e-79 S Psort location Cytoplasmic, score 8.87
BDAKENFB_00900 1.9e-182 M domain protein
BDAKENFB_00901 5.1e-177 S Terminase
BDAKENFB_00902 1.8e-244 S Phage portal protein, SPP1 Gp6-like
BDAKENFB_00903 2.8e-113
BDAKENFB_00905 1.3e-72
BDAKENFB_00906 1.6e-152 V Phage capsid family
BDAKENFB_00908 2.2e-64 S Phage protein Gp19/Gp15/Gp42
BDAKENFB_00909 1.5e-44
BDAKENFB_00910 4.7e-35
BDAKENFB_00911 1.7e-61
BDAKENFB_00912 1.1e-110
BDAKENFB_00913 8.6e-63
BDAKENFB_00915 1.8e-197 S phage tail tape measure protein
BDAKENFB_00916 4.1e-142
BDAKENFB_00917 1.9e-299 S Psort location Cytoplasmic, score
BDAKENFB_00919 1.7e-84
BDAKENFB_00920 1.9e-29
BDAKENFB_00922 1.1e-92 L DNA integration
BDAKENFB_00923 3.7e-19
BDAKENFB_00924 2.2e-48 MU outer membrane autotransporter barrel domain protein
BDAKENFB_00929 5.4e-211 M Glycosyl hydrolases family 25
BDAKENFB_00930 1.5e-28 S Putative phage holin Dp-1
BDAKENFB_00931 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BDAKENFB_00932 1.6e-157 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
BDAKENFB_00933 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
BDAKENFB_00934 3e-187 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
BDAKENFB_00935 4.2e-74 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
BDAKENFB_00936 1.8e-52 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
BDAKENFB_00937 9.3e-145 L DNA integration
BDAKENFB_00938 5.2e-10 MU outer membrane autotransporter barrel domain protein
BDAKENFB_00939 6.1e-179
BDAKENFB_00940 5.3e-97 L reverse transcriptase
BDAKENFB_00943 8.8e-21
BDAKENFB_00944 3e-88 M Glycosyl hydrolases family 25
BDAKENFB_00945 1.3e-29 S Putative phage holin Dp-1
BDAKENFB_00946 1.5e-52
BDAKENFB_00947 4.9e-28 K Transcriptional regulator
BDAKENFB_00948 7.5e-12
BDAKENFB_00949 3e-09
BDAKENFB_00950 3.4e-123 int8 L Phage integrase family
BDAKENFB_00951 1e-41 EGP Major facilitator Superfamily
BDAKENFB_00952 2.9e-119 ytrE V ATPases associated with a variety of cellular activities
BDAKENFB_00953 1.9e-28 2.7.13.3 T Histidine kinase
BDAKENFB_00954 5.4e-57 T helix_turn_helix, Lux Regulon
BDAKENFB_00955 1.3e-82
BDAKENFB_00956 6.1e-155 V N-Acetylmuramoyl-L-alanine amidase
BDAKENFB_00957 1.8e-190
BDAKENFB_00958 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
BDAKENFB_00959 1.9e-112 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
BDAKENFB_00960 1.1e-270 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BDAKENFB_00961 2.3e-176 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
BDAKENFB_00962 1.3e-149 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BDAKENFB_00963 2.2e-131 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BDAKENFB_00964 1e-53 M Lysin motif
BDAKENFB_00965 8.5e-84 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BDAKENFB_00966 1.1e-217 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BDAKENFB_00967 0.0 L DNA helicase
BDAKENFB_00968 7e-92 mraZ K Belongs to the MraZ family
BDAKENFB_00969 1.5e-189 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
BDAKENFB_00970 1.5e-61 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
BDAKENFB_00971 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
BDAKENFB_00972 1.4e-148 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BDAKENFB_00973 6.7e-260 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
BDAKENFB_00974 8.8e-193 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BDAKENFB_00975 2.1e-255 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BDAKENFB_00976 8.1e-203 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
BDAKENFB_00977 6.3e-216 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BDAKENFB_00978 2.3e-271 murC 6.3.2.8 M Belongs to the MurCDEF family
BDAKENFB_00979 5e-140 ftsQ 6.3.2.4 D Cell division protein FtsQ
BDAKENFB_00980 1.7e-248 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
BDAKENFB_00981 3.5e-27
BDAKENFB_00982 2.3e-219 S Metal-independent alpha-mannosidase (GH125)
BDAKENFB_00983 4.9e-165 2.7.1.4 G pfkB family carbohydrate kinase
BDAKENFB_00984 1.7e-218 GK ROK family
BDAKENFB_00985 4.7e-307 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
BDAKENFB_00986 1.7e-188 dppB EP Binding-protein-dependent transport system inner membrane component
BDAKENFB_00987 4.7e-192 dppC EP Binding-protein-dependent transport system inner membrane component
BDAKENFB_00988 0.0 P Belongs to the ABC transporter superfamily
BDAKENFB_00989 4e-95 3.6.1.55 F NUDIX domain
BDAKENFB_00990 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
BDAKENFB_00991 5.3e-287 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
BDAKENFB_00992 6.6e-187 V Acetyltransferase (GNAT) domain
BDAKENFB_00993 3.9e-279 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BDAKENFB_00994 5.7e-98 sigH K Belongs to the sigma-70 factor family. ECF subfamily
BDAKENFB_00995 5.9e-36
BDAKENFB_00996 1.3e-187 galM 5.1.3.3 G Aldose 1-epimerase
BDAKENFB_00997 7.9e-172 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
BDAKENFB_00998 2.1e-88 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BDAKENFB_00999 1.8e-198 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
BDAKENFB_01000 3.4e-111 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
BDAKENFB_01001 1.6e-103 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BDAKENFB_01002 2.1e-25 rpmI J Ribosomal protein L35
BDAKENFB_01003 9.6e-62 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BDAKENFB_01004 2.9e-176 xerD D recombinase XerD
BDAKENFB_01005 6.8e-153 soj D CobQ CobB MinD ParA nucleotide binding domain protein
BDAKENFB_01006 1.8e-150 nrtR 3.6.1.55 F NUDIX hydrolase
BDAKENFB_01007 1.7e-249 naiP U Sugar (and other) transporter
BDAKENFB_01008 0.0 typA T Elongation factor G C-terminus
BDAKENFB_01009 4e-104
BDAKENFB_01010 3.7e-190 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
BDAKENFB_01011 8.9e-195 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
BDAKENFB_01012 1.9e-25
BDAKENFB_01013 5.2e-08
BDAKENFB_01014 4.7e-171 xerC D Belongs to the 'phage' integrase family. XerC subfamily
BDAKENFB_01015 0.0 E ABC transporter, substrate-binding protein, family 5
BDAKENFB_01016 0.0 E ABC transporter, substrate-binding protein, family 5
BDAKENFB_01017 1.6e-155 dppB EP Binding-protein-dependent transport system inner membrane component
BDAKENFB_01018 4.1e-170 dppC EP N-terminal TM domain of oligopeptide transport permease C
BDAKENFB_01019 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
BDAKENFB_01020 1.4e-172 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
BDAKENFB_01021 8.3e-151 S Protein of unknown function (DUF3710)
BDAKENFB_01022 2.4e-133 S Protein of unknown function (DUF3159)
BDAKENFB_01023 2.8e-243 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BDAKENFB_01024 3.3e-98
BDAKENFB_01025 0.0 ctpE P E1-E2 ATPase
BDAKENFB_01026 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BDAKENFB_01027 5.4e-248 VP1224 V Psort location CytoplasmicMembrane, score 9.99
BDAKENFB_01028 4.7e-109 maa 2.3.1.18, 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
BDAKENFB_01029 2.2e-209 rhaR1 K helix_turn_helix, arabinose operon control protein
BDAKENFB_01030 8.9e-229 V ABC-2 family transporter protein
BDAKENFB_01031 7.7e-225 V ABC-2 family transporter protein
BDAKENFB_01032 4.4e-191 V ATPases associated with a variety of cellular activities
BDAKENFB_01033 3.2e-245 T Histidine kinase
BDAKENFB_01034 9e-116 K helix_turn_helix, Lux Regulon
BDAKENFB_01035 0.0 S Protein of unknown function DUF262
BDAKENFB_01036 1.8e-127 K helix_turn_helix, Lux Regulon
BDAKENFB_01037 5.1e-243 T Histidine kinase
BDAKENFB_01038 1.4e-57 S Domain of unknown function (DUF5067)
BDAKENFB_01039 1.7e-127 ybhL S Belongs to the BI1 family
BDAKENFB_01040 8e-177 ydeD EG EamA-like transporter family
BDAKENFB_01041 1.1e-155 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
BDAKENFB_01042 1e-281 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BDAKENFB_01043 1.3e-193 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BDAKENFB_01044 7.2e-11 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BDAKENFB_01045 0.0 ftsK D FtsK SpoIIIE family protein
BDAKENFB_01046 4.1e-124 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BDAKENFB_01047 6.1e-97 cinA 3.5.1.42 S Belongs to the CinA family
BDAKENFB_01048 1.6e-80 K Helix-turn-helix XRE-family like proteins
BDAKENFB_01049 4.3e-46 S Protein of unknown function (DUF3046)
BDAKENFB_01050 5.4e-212 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BDAKENFB_01051 1.3e-122 recX S Modulates RecA activity
BDAKENFB_01052 3.3e-118 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BDAKENFB_01053 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
BDAKENFB_01054 3.4e-194 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BDAKENFB_01055 1.3e-97
BDAKENFB_01056 1.9e-132 plsC2 2.3.1.51 I Phosphate acyltransferases
BDAKENFB_01057 3.7e-20 G Binding-protein-dependent transport system inner membrane component
BDAKENFB_01058 1.4e-181 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
BDAKENFB_01059 6.5e-148 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BDAKENFB_01060 2.5e-80
BDAKENFB_01061 2.5e-211 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
BDAKENFB_01062 3e-80 M Protein of unknown function (DUF3152)
BDAKENFB_01063 4.2e-09 M Protein of unknown function (DUF3152)
BDAKENFB_01064 9.2e-130 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
BDAKENFB_01065 3.4e-19 S zinc-ribbon domain
BDAKENFB_01067 5.7e-167 T Pfam Adenylate and Guanylate cyclase catalytic domain
BDAKENFB_01068 1.4e-291 D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BDAKENFB_01069 1.7e-70 rplI J Binds to the 23S rRNA
BDAKENFB_01070 3.5e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BDAKENFB_01071 3.8e-66 ssb1 L Single-stranded DNA-binding protein
BDAKENFB_01072 2.5e-46 rpsF J Binds together with S18 to 16S ribosomal RNA
BDAKENFB_01073 3.3e-186 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BDAKENFB_01074 5.7e-175 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BDAKENFB_01075 1.1e-259 EGP Major Facilitator Superfamily
BDAKENFB_01076 2.8e-166 iunH2 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
BDAKENFB_01077 3.3e-197 K helix_turn _helix lactose operon repressor
BDAKENFB_01078 1.2e-61
BDAKENFB_01079 1.4e-203 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
BDAKENFB_01080 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
BDAKENFB_01081 9.3e-233 glf 5.4.99.9 M UDP-galactopyranose mutase
BDAKENFB_01082 5.7e-85 K Cro/C1-type HTH DNA-binding domain
BDAKENFB_01083 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
BDAKENFB_01084 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
BDAKENFB_01085 4e-122 S Short repeat of unknown function (DUF308)
BDAKENFB_01086 8.4e-36 manR K PRD domain
BDAKENFB_01087 4.5e-13 S Psort location Extracellular, score 8.82
BDAKENFB_01088 2.8e-230 EGP Major facilitator Superfamily
BDAKENFB_01089 1.2e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BDAKENFB_01090 2e-269 KLT Domain of unknown function (DUF4032)
BDAKENFB_01091 1.6e-210 ugpC E Belongs to the ABC transporter superfamily
BDAKENFB_01092 2.8e-131 K LytTr DNA-binding domain
BDAKENFB_01093 1.7e-231 T GHKL domain
BDAKENFB_01094 1.9e-59
BDAKENFB_01095 5.6e-213 clcA_2 P Voltage gated chloride channel
BDAKENFB_01096 8.8e-48 S Psort location Cytoplasmic, score
BDAKENFB_01097 2.5e-77
BDAKENFB_01098 1.3e-137
BDAKENFB_01099 2.6e-159 3.4.22.70 M Sortase family
BDAKENFB_01100 6.2e-235 M LPXTG-motif cell wall anchor domain protein
BDAKENFB_01101 0.0 S LPXTG-motif cell wall anchor domain protein
BDAKENFB_01102 1.3e-10 S LPXTG-motif cell wall anchor domain protein
BDAKENFB_01103 1.3e-72 S GtrA-like protein
BDAKENFB_01104 0.0 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
BDAKENFB_01105 3.2e-119 ybjG 3.6.1.27 I Psort location CytoplasmicMembrane, score
BDAKENFB_01106 2.1e-81 ypeA 2.3.1.1 K Psort location Cytoplasmic, score 8.87
BDAKENFB_01107 1.1e-113 vex2 V ABC transporter, ATP-binding protein
BDAKENFB_01108 5.9e-214 vex1 V Efflux ABC transporter, permease protein
BDAKENFB_01109 2.9e-241 vex3 V ABC transporter permease
BDAKENFB_01110 1.8e-24 G Major facilitator Superfamily
BDAKENFB_01111 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
BDAKENFB_01112 3e-187 lacR K Transcriptional regulator, LacI family
BDAKENFB_01113 0.0 3.2.1.51 GH95 G Glycosyl hydrolase family 65, N-terminal domain
BDAKENFB_01114 4e-167 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
BDAKENFB_01115 2e-120 S Amidohydrolase
BDAKENFB_01116 5.8e-146 IQ KR domain
BDAKENFB_01117 4e-245 4.2.1.68 M Enolase C-terminal domain-like
BDAKENFB_01118 9.9e-266 G Bacterial extracellular solute-binding protein
BDAKENFB_01119 1.1e-175 P Binding-protein-dependent transport system inner membrane component
BDAKENFB_01120 2.4e-156 P Binding-protein-dependent transport system inner membrane component
BDAKENFB_01121 6e-191 K Bacterial regulatory proteins, lacI family
BDAKENFB_01122 2.3e-53 lacZ5 3.2.1.23 G beta-galactosidase activity
BDAKENFB_01123 4.4e-263 G Bacterial extracellular solute-binding protein
BDAKENFB_01124 9.6e-135 K helix_turn _helix lactose operon repressor
BDAKENFB_01125 8.3e-110 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
BDAKENFB_01126 3e-13 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
BDAKENFB_01127 2.7e-79 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
BDAKENFB_01128 0.0 3.2.1.21 GH3 G Fibronectin type III-like domain
BDAKENFB_01129 0.0 KLT Protein tyrosine kinase
BDAKENFB_01130 7.5e-151 O Thioredoxin
BDAKENFB_01132 5.7e-89 S G5
BDAKENFB_01134 1.7e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
BDAKENFB_01135 0.0 trxB1 1.8.1.9 C Thioredoxin domain
BDAKENFB_01136 3.8e-12 S Psort location Extracellular, score 8.82
BDAKENFB_01137 2.7e-38 G ABC transporter permease
BDAKENFB_01138 7.5e-28
BDAKENFB_01139 4e-112 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
BDAKENFB_01140 1.2e-154 ypfH S Phospholipase/Carboxylesterase
BDAKENFB_01141 0.0 yjcE P Sodium/hydrogen exchanger family
BDAKENFB_01142 1.4e-77 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
BDAKENFB_01143 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
BDAKENFB_01144 6.5e-229 nagC GK ROK family
BDAKENFB_01145 3.8e-243 msmE7 G Bacterial extracellular solute-binding protein
BDAKENFB_01146 2.1e-158 G Binding-protein-dependent transport system inner membrane component
BDAKENFB_01147 2.8e-157 G Binding-protein-dependent transport system inner membrane component
BDAKENFB_01148 1.2e-241 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
BDAKENFB_01151 4.6e-145 recQ 3.6.4.12, 5.99.1.2 F RecQ zinc-binding
BDAKENFB_01153 2e-20
BDAKENFB_01155 6.8e-79 L helicase
BDAKENFB_01156 1.7e-10
BDAKENFB_01159 7.9e-11
BDAKENFB_01167 6.3e-38
BDAKENFB_01168 1.5e-181 L Phage integrase family
BDAKENFB_01169 1.7e-226 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
BDAKENFB_01170 7e-178 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
BDAKENFB_01171 9.3e-155 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
BDAKENFB_01172 6.6e-179 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
BDAKENFB_01173 5.5e-124 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BDAKENFB_01174 2.9e-162 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
BDAKENFB_01175 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
BDAKENFB_01176 8.8e-109 J Acetyltransferase (GNAT) domain
BDAKENFB_01177 6.1e-69 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BDAKENFB_01178 2.5e-219 yxjG_1 E Psort location Cytoplasmic, score 8.87
BDAKENFB_01179 6.1e-122 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
BDAKENFB_01180 1.8e-50 sdpR K helix_turn_helix, Arsenical Resistance Operon Repressor
BDAKENFB_01181 1.1e-138 S SdpI/YhfL protein family
BDAKENFB_01182 3.5e-109 3.8.1.2 S Haloacid dehalogenase-like hydrolase
BDAKENFB_01183 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BDAKENFB_01184 5e-125 XK27_06785 V ABC transporter
BDAKENFB_01187 6.3e-62
BDAKENFB_01188 3.3e-96 M Peptidase family M23
BDAKENFB_01189 0.0 fadD1 6.2.1.3 I AMP-binding enzyme
BDAKENFB_01190 1.1e-268 G ABC transporter substrate-binding protein
BDAKENFB_01191 5.3e-231 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
BDAKENFB_01192 1.1e-209 guaB 1.1.1.205 F IMP dehydrogenase family protein
BDAKENFB_01193 6.1e-108 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
BDAKENFB_01194 9e-72 U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
BDAKENFB_01195 2.9e-241 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BDAKENFB_01196 3.6e-67 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
BDAKENFB_01197 2.5e-143 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
BDAKENFB_01198 3.3e-118
BDAKENFB_01200 4.5e-233 XK27_00240 K Fic/DOC family
BDAKENFB_01201 7.8e-70 pdxH S Pfam:Pyridox_oxidase
BDAKENFB_01202 6.1e-302 M domain protein
BDAKENFB_01203 5.6e-83 3.4.22.70 M Sortase family
BDAKENFB_01204 5.2e-65 3.4.22.70 M Sortase family
BDAKENFB_01205 7.4e-163 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
BDAKENFB_01206 5.7e-172 corA P CorA-like Mg2+ transporter protein
BDAKENFB_01207 1.5e-142 ET Bacterial periplasmic substrate-binding proteins
BDAKENFB_01208 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
BDAKENFB_01209 1.3e-92 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
BDAKENFB_01210 0.0 comE S Competence protein
BDAKENFB_01211 6.5e-179 holA 2.7.7.7 L DNA polymerase III delta subunit
BDAKENFB_01212 9.2e-94 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
BDAKENFB_01213 1.3e-148 yeaZ 2.3.1.234 O Glycoprotease family
BDAKENFB_01214 2.6e-103 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
BDAKENFB_01215 3.1e-195 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BDAKENFB_01217 2.1e-119 yoaP E YoaP-like
BDAKENFB_01218 4.5e-185 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
BDAKENFB_01219 5.3e-119 ykoE S ABC-type cobalt transport system, permease component
BDAKENFB_01220 6.7e-72 K MerR family regulatory protein
BDAKENFB_01221 4.6e-199 adhB 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
BDAKENFB_01222 1.5e-143 4.1.1.44 S Carboxymuconolactone decarboxylase family
BDAKENFB_01223 5.5e-222 yxjG_1 E Psort location Cytoplasmic, score 8.87
BDAKENFB_01224 3.6e-76 S Psort location CytoplasmicMembrane, score
BDAKENFB_01225 3.5e-183 cat P Cation efflux family
BDAKENFB_01228 7.4e-113
BDAKENFB_01229 3.7e-152
BDAKENFB_01230 1.7e-145 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
BDAKENFB_01231 2.5e-280 pepC 3.4.22.40 E Peptidase C1-like family
BDAKENFB_01232 2.9e-176 S IMP dehydrogenase activity
BDAKENFB_01233 4.6e-299 ybiT S ABC transporter
BDAKENFB_01234 4.7e-111 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
BDAKENFB_01235 2.8e-66 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BDAKENFB_01237 2e-13
BDAKENFB_01238 3.4e-273 S Psort location Cytoplasmic, score 8.87
BDAKENFB_01239 9.5e-141 S Domain of unknown function (DUF4194)
BDAKENFB_01240 0.0 S Psort location Cytoplasmic, score 8.87
BDAKENFB_01241 9.3e-220 S Psort location Cytoplasmic, score 8.87
BDAKENFB_01242 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
BDAKENFB_01243 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
BDAKENFB_01244 7.1e-183 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
BDAKENFB_01245 1.1e-170 rapZ S Displays ATPase and GTPase activities
BDAKENFB_01246 1.3e-171 whiA K May be required for sporulation
BDAKENFB_01247 1.9e-220 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
BDAKENFB_01248 8.2e-148 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
BDAKENFB_01249 2.4e-32 secG U Preprotein translocase SecG subunit
BDAKENFB_01250 1.3e-162 S Sucrose-6F-phosphate phosphohydrolase
BDAKENFB_01251 8e-301 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
BDAKENFB_01252 7.1e-09 pnuC H Nicotinamide mononucleotide transporter
BDAKENFB_01253 2.5e-112 pnuC H Nicotinamide mononucleotide transporter
BDAKENFB_01254 2.2e-41 nadR H ATPase kinase involved in NAD metabolism
BDAKENFB_01255 4.2e-203 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BDAKENFB_01256 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
BDAKENFB_01257 1.1e-195 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
BDAKENFB_01258 2.4e-188 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
BDAKENFB_01259 5.1e-158 G Fructosamine kinase
BDAKENFB_01260 6.9e-156 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
BDAKENFB_01261 1.6e-156 S PAC2 family
BDAKENFB_01268 2.5e-08
BDAKENFB_01269 5.4e-36
BDAKENFB_01270 4.7e-76 garA T Inner membrane component of T3SS, cytoplasmic domain
BDAKENFB_01271 9.7e-112 K helix_turn_helix, mercury resistance
BDAKENFB_01272 4.6e-61
BDAKENFB_01273 8.8e-141 pgp 3.1.3.18 S HAD-hyrolase-like
BDAKENFB_01274 3.9e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
BDAKENFB_01275 0.0 helY L DEAD DEAH box helicase
BDAKENFB_01276 2.1e-54
BDAKENFB_01277 0.0 pafB K WYL domain
BDAKENFB_01278 1.4e-264 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
BDAKENFB_01280 1.1e-69
BDAKENFB_01281 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
BDAKENFB_01282 9.1e-144 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
BDAKENFB_01283 5.8e-161 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
BDAKENFB_01284 8.2e-34
BDAKENFB_01285 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
BDAKENFB_01286 8.7e-246
BDAKENFB_01287 2.6e-161 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BDAKENFB_01288 2.2e-221 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
BDAKENFB_01289 1.8e-99 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BDAKENFB_01290 6.8e-50 yajC U Preprotein translocase subunit
BDAKENFB_01291 2.8e-199 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
BDAKENFB_01292 2.3e-105 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
BDAKENFB_01293 1e-99 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
BDAKENFB_01294 5.2e-128 yebC K transcriptional regulatory protein
BDAKENFB_01295 1.8e-100 pgsA1 2.7.8.11, 2.7.8.5 I CDP-alcohol phosphatidyltransferase
BDAKENFB_01296 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BDAKENFB_01297 6.5e-140 S Bacterial protein of unknown function (DUF881)
BDAKENFB_01298 4.2e-45 sbp S Protein of unknown function (DUF1290)
BDAKENFB_01299 1.1e-170 S Bacterial protein of unknown function (DUF881)
BDAKENFB_01300 4.6e-103 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BDAKENFB_01301 4.8e-154 hisG 2.4.2.17 F ATP phosphoribosyltransferase
BDAKENFB_01302 1.9e-40 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
BDAKENFB_01303 3.8e-98 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
BDAKENFB_01304 3.5e-180 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BDAKENFB_01305 2.2e-154 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
BDAKENFB_01306 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
BDAKENFB_01307 8.1e-293 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BDAKENFB_01308 2.9e-72 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BDAKENFB_01309 1.5e-138 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
BDAKENFB_01310 1.2e-61 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
BDAKENFB_01311 4.3e-150 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
BDAKENFB_01312 6.7e-176 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
BDAKENFB_01313 7.6e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
BDAKENFB_01314 2.6e-135 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
BDAKENFB_01316 5e-143 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BDAKENFB_01317 4.2e-139 rpsB J Belongs to the universal ribosomal protein uS2 family
BDAKENFB_01318 1.1e-83 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
BDAKENFB_01319 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
BDAKENFB_01320 5.4e-121
BDAKENFB_01321 7.2e-118 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
BDAKENFB_01322 4.1e-234 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
BDAKENFB_01323 8.9e-144 cobB2 K Sir2 family
BDAKENFB_01325 9e-172 I alpha/beta hydrolase fold
BDAKENFB_01326 0.0 glfT 2.4.1.288 GT2 S Glycosyltransferase like family 2
BDAKENFB_01327 1.1e-60 aspB E Aminotransferase class-V
BDAKENFB_01328 2.9e-179 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
BDAKENFB_01329 6.1e-126 tmp1 S Domain of unknown function (DUF4391)
BDAKENFB_01330 3e-201 S Endonuclease/Exonuclease/phosphatase family
BDAKENFB_01332 1.2e-40 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
BDAKENFB_01333 4.4e-244 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
BDAKENFB_01334 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
BDAKENFB_01335 1.6e-139 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BDAKENFB_01336 3.9e-156 hgdC I BadF/BadG/BcrA/BcrD ATPase family
BDAKENFB_01337 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
BDAKENFB_01338 2.1e-108 fahA Q Fumarylacetoacetate (FAA) hydrolase family
BDAKENFB_01339 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
BDAKENFB_01340 1.8e-135 3.6.3.3, 3.6.3.5, 3.6.3.54 P Heavy metal translocating P-type atpase
BDAKENFB_01341 6.3e-169 rmuC S RmuC family
BDAKENFB_01342 2.7e-104 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BDAKENFB_01343 3.1e-133 spoU 2.1.1.185 J RNA methyltransferase TrmH family
BDAKENFB_01344 6.2e-134 K Psort location Cytoplasmic, score
BDAKENFB_01345 0.0 S Psort location CytoplasmicMembrane, score 9.99
BDAKENFB_01346 3.6e-241 V ABC transporter permease
BDAKENFB_01347 1.9e-156 V ABC transporter
BDAKENFB_01348 5.1e-150 T HD domain
BDAKENFB_01349 3.9e-167 S Glutamine amidotransferase domain
BDAKENFB_01350 0.0 kup P Transport of potassium into the cell
BDAKENFB_01351 7.7e-185 tatD L TatD related DNase
BDAKENFB_01352 0.0 G Alpha-L-arabinofuranosidase C-terminus
BDAKENFB_01353 8.1e-22 rafA 3.2.1.22 G alpha-galactosidase
BDAKENFB_01354 4.3e-220 K helix_turn _helix lactose operon repressor
BDAKENFB_01355 0.0 rafA 3.2.1.22 G Psort location Cytoplasmic, score 8.87
BDAKENFB_01356 1e-125
BDAKENFB_01357 0.0 yknV V ABC transporter
BDAKENFB_01358 0.0 mdlA2 V ABC transporter
BDAKENFB_01359 1.1e-214 lipA I Hydrolase, alpha beta domain protein
BDAKENFB_01360 5e-27 S Psort location Cytoplasmic, score 8.87
BDAKENFB_01361 2.5e-155 I alpha/beta hydrolase fold
BDAKENFB_01362 1.6e-232 M Protein of unknown function (DUF2961)
BDAKENFB_01363 3.2e-153 P Binding-protein-dependent transport system inner membrane component
BDAKENFB_01364 3.2e-159 G Binding-protein-dependent transport system inner membrane component
BDAKENFB_01365 5.1e-256 G Bacterial extracellular solute-binding protein
BDAKENFB_01366 2.2e-190 K helix_turn _helix lactose operon repressor
BDAKENFB_01367 0.0 M probably involved in cell wall
BDAKENFB_01368 4.5e-252 3.2.1.14 GH18 S Carbohydrate binding domain
BDAKENFB_01369 0.0 T Diguanylate cyclase, GGDEF domain
BDAKENFB_01370 6.7e-187 lacR K Transcriptional regulator, LacI family
BDAKENFB_01371 4.8e-222 nagA 3.5.1.25 G Amidohydrolase family
BDAKENFB_01372 1.2e-149 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
BDAKENFB_01373 0.0 G Glycosyl hydrolase family 20, domain 2
BDAKENFB_01374 3e-173 2.7.1.2 GK ROK family
BDAKENFB_01375 1.1e-162 G ABC transporter permease
BDAKENFB_01376 7.5e-147 G Binding-protein-dependent transport system inner membrane component
BDAKENFB_01377 3.8e-187 G Bacterial extracellular solute-binding protein
BDAKENFB_01378 5.4e-46 G Bacterial extracellular solute-binding protein
BDAKENFB_01379 1.4e-209 GK ROK family
BDAKENFB_01380 1.4e-260 lacS G Psort location CytoplasmicMembrane, score 10.00
BDAKENFB_01381 6.3e-136 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
BDAKENFB_01382 1.1e-166 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
BDAKENFB_01383 1.2e-236 G Transporter major facilitator family protein
BDAKENFB_01384 1.9e-233 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
BDAKENFB_01385 0.0 3.2.1.37 GH43 G Glycosyl hydrolases family 43
BDAKENFB_01386 1.1e-239 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
BDAKENFB_01387 2.3e-108 K Bacterial regulatory proteins, tetR family
BDAKENFB_01388 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
BDAKENFB_01389 6.1e-221 lmrB U Major Facilitator Superfamily
BDAKENFB_01390 5.3e-14 K helix_turn_helix, mercury resistance
BDAKENFB_01391 1.7e-116 K Periplasmic binding protein domain
BDAKENFB_01392 1.3e-214 EGP Major facilitator Superfamily
BDAKENFB_01393 0.0 3.2.1.40 E Bacterial alpha-L-rhamnosidase C-terminal domain
BDAKENFB_01394 1.1e-181 G Transporter major facilitator family protein
BDAKENFB_01395 1.7e-194 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
BDAKENFB_01396 9.6e-106 K Bacterial regulatory proteins, tetR family
BDAKENFB_01397 0.0 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
BDAKENFB_01398 1.3e-96 K MarR family
BDAKENFB_01399 0.0 V ABC transporter, ATP-binding protein
BDAKENFB_01400 0.0 V ABC transporter transmembrane region
BDAKENFB_01401 2.6e-183 lacR K Transcriptional regulator, LacI family
BDAKENFB_01402 1e-257 lacS G Psort location CytoplasmicMembrane, score 10.00
BDAKENFB_01403 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BDAKENFB_01404 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
BDAKENFB_01405 9.7e-166 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BDAKENFB_01406 6e-18 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BDAKENFB_01407 3.4e-115 S CRISPR-associated protein (Cas_Csn2)
BDAKENFB_01408 2e-42 L transposase activity
BDAKENFB_01409 1.3e-131 L HTH-like domain
BDAKENFB_01410 7.3e-33
BDAKENFB_01412 7.4e-126 S Phospholipase/Carboxylesterase
BDAKENFB_01413 9e-239 patB 4.4.1.8 E Aminotransferase, class I II
BDAKENFB_01414 1.3e-185 K LysR substrate binding domain protein
BDAKENFB_01415 6.5e-156 S Patatin-like phospholipase
BDAKENFB_01416 4.9e-176 iaaA 3.4.19.5, 3.5.1.1 E Asparaginase
BDAKENFB_01417 7.8e-302 E ABC transporter, substrate-binding protein, family 5
BDAKENFB_01418 3.5e-21 S Patatin-like phospholipase
BDAKENFB_01419 8.3e-145 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
BDAKENFB_01420 7.8e-171 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
BDAKENFB_01421 3.3e-118 S Vitamin K epoxide reductase
BDAKENFB_01422 4.5e-174 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
BDAKENFB_01423 1.2e-32 S Protein of unknown function (DUF3107)
BDAKENFB_01424 5.2e-268 mphA S Aminoglycoside phosphotransferase
BDAKENFB_01425 3.1e-281 uvrD2 3.6.4.12 L DNA helicase
BDAKENFB_01426 1.7e-285 S Zincin-like metallopeptidase
BDAKENFB_01427 6.5e-154 lon T Belongs to the peptidase S16 family
BDAKENFB_01428 6.5e-75 S Protein of unknown function (DUF3052)
BDAKENFB_01430 1.9e-225 2.7.11.1 NU Tfp pilus assembly protein FimV
BDAKENFB_01431 8.5e-218 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
BDAKENFB_01432 5.6e-225 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
BDAKENFB_01433 0.0 I acetylesterase activity
BDAKENFB_01434 7.3e-135 recO L Involved in DNA repair and RecF pathway recombination
BDAKENFB_01435 4e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BDAKENFB_01436 1.5e-204 iunH1 3.2.2.1 F nucleoside hydrolase
BDAKENFB_01437 1.6e-205 P NMT1/THI5 like
BDAKENFB_01438 8.5e-143 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
BDAKENFB_01439 0.0 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
BDAKENFB_01440 2.8e-241 lacY P LacY proton/sugar symporter
BDAKENFB_01441 3.7e-193 K helix_turn _helix lactose operon repressor
BDAKENFB_01442 3e-60 S Thiamine-binding protein
BDAKENFB_01443 2.9e-151 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
BDAKENFB_01444 2.4e-133 thiE 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
BDAKENFB_01445 9.9e-155 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
BDAKENFB_01446 0.0
BDAKENFB_01447 1.5e-198 pilT NU Type II/IV secretion system protein
BDAKENFB_01448 6.5e-105 pulE NU Type II/IV secretion system protein
BDAKENFB_01449 1.4e-161 pulE NU Type II/IV secretion system protein
BDAKENFB_01450 1.8e-63 pilM NU Type IV pilus assembly protein PilM;
BDAKENFB_01451 1.8e-165 pilN NU PFAM Fimbrial assembly family protein
BDAKENFB_01452 1e-105 S Pilus assembly protein, PilO
BDAKENFB_01453 1.3e-295 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
BDAKENFB_01454 1.1e-244 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BDAKENFB_01455 5.6e-220 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BDAKENFB_01456 8.9e-81 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
BDAKENFB_01457 1.2e-40 yggT S YGGT family
BDAKENFB_01458 1.3e-30 3.1.21.3 V DivIVA protein
BDAKENFB_01459 7.3e-87 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BDAKENFB_01460 4.9e-176 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
BDAKENFB_01461 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
BDAKENFB_01462 1.2e-258 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BDAKENFB_01463 3.2e-225 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BDAKENFB_01464 1.5e-109 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
BDAKENFB_01465 2.7e-119
BDAKENFB_01466 6.3e-122 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BDAKENFB_01467 1.4e-130 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
BDAKENFB_01468 3.1e-264 glnA2 6.3.1.2 E glutamine synthetase
BDAKENFB_01469 5.6e-219 S Domain of unknown function (DUF5067)
BDAKENFB_01470 2.4e-138 M Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
BDAKENFB_01471 4.1e-170 EGP Major facilitator Superfamily
BDAKENFB_01472 6.6e-63
BDAKENFB_01473 3.3e-40
BDAKENFB_01474 1.1e-45
BDAKENFB_01475 4.7e-08
BDAKENFB_01476 2.5e-10
BDAKENFB_01478 2.3e-24
BDAKENFB_01479 2.2e-13
BDAKENFB_01480 6.9e-22 T Pentapeptide repeats (8 copies)
BDAKENFB_01481 5.3e-120 K BRO family, N-terminal domain
BDAKENFB_01485 6.3e-86 yqaJ L YqaJ-like viral recombinase domain
BDAKENFB_01486 4.9e-35 G ABC transporter permease
BDAKENFB_01487 2.5e-147 G Binding-protein-dependent transport system inner membrane component
BDAKENFB_01488 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BDAKENFB_01489 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BDAKENFB_01490 6.8e-100
BDAKENFB_01491 3.5e-182 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
BDAKENFB_01492 3.3e-126 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
BDAKENFB_01493 5e-254 S UPF0210 protein
BDAKENFB_01494 5.5e-43 gcvR T Belongs to the UPF0237 family
BDAKENFB_01495 0.0 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
BDAKENFB_01496 8.5e-188 K helix_turn _helix lactose operon repressor
BDAKENFB_01497 1e-114 S Protein of unknown function, DUF624
BDAKENFB_01498 7.6e-169 G Binding-protein-dependent transport system inner membrane component
BDAKENFB_01499 6.1e-171 G Binding-protein-dependent transport system inner membrane component
BDAKENFB_01500 0.0 G Bacterial extracellular solute-binding protein
BDAKENFB_01501 7.6e-233 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
BDAKENFB_01502 1.8e-250 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
BDAKENFB_01503 1.3e-140 glpR K DeoR C terminal sensor domain
BDAKENFB_01504 1.3e-226 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
BDAKENFB_01505 1.7e-218 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
BDAKENFB_01506 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
BDAKENFB_01507 2.3e-133 glxR K helix_turn_helix, cAMP Regulatory protein
BDAKENFB_01508 3.5e-216 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
BDAKENFB_01509 1.5e-87 J TM2 domain
BDAKENFB_01510 2.2e-193 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
BDAKENFB_01511 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
BDAKENFB_01512 4.3e-236 S Uncharacterized conserved protein (DUF2183)
BDAKENFB_01513 2.7e-70 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
BDAKENFB_01514 8.7e-209 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
BDAKENFB_01515 1.8e-153 mhpC I Alpha/beta hydrolase family
BDAKENFB_01516 4.5e-114 F Domain of unknown function (DUF4916)
BDAKENFB_01517 1.6e-58 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
BDAKENFB_01518 8.9e-168 S G5
BDAKENFB_01519 2.1e-88
BDAKENFB_01521 6.9e-266 rfbP M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
BDAKENFB_01522 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
BDAKENFB_01523 6.5e-148 P Binding-protein-dependent transport system inner membrane component
BDAKENFB_01524 1.7e-162 P Binding-protein-dependent transport system inner membrane component
BDAKENFB_01525 8.6e-270 G Bacterial extracellular solute-binding protein
BDAKENFB_01526 5.9e-183 K Psort location Cytoplasmic, score
BDAKENFB_01527 9.8e-56 yccF S Inner membrane component domain
BDAKENFB_01528 1.6e-44 S Domain of unknown function (DUF4143)
BDAKENFB_01529 9.3e-39 pin L Resolvase, N terminal domain
BDAKENFB_01530 9.2e-66 L Integrase core domain
BDAKENFB_01531 3.6e-37 L Psort location Cytoplasmic, score 8.87
BDAKENFB_01532 4.2e-88
BDAKENFB_01533 9.8e-66
BDAKENFB_01534 2.7e-33 L Transposase
BDAKENFB_01535 2.1e-63 L PFAM Integrase catalytic
BDAKENFB_01536 1.9e-84 S enterobacterial common antigen metabolic process
BDAKENFB_01537 3.1e-134 G Acyltransferase family
BDAKENFB_01538 1.5e-23 G Acyltransferase family
BDAKENFB_01539 8.2e-219 rfbX S polysaccharide biosynthetic process
BDAKENFB_01540 8.8e-187 1.13.11.79 C Psort location Cytoplasmic, score 8.87
BDAKENFB_01541 6.1e-210 S Polysaccharide pyruvyl transferase
BDAKENFB_01542 4.2e-192 S Glycosyltransferase like family 2
BDAKENFB_01543 1.8e-59
BDAKENFB_01544 3.1e-131 cps1D M Domain of unknown function (DUF4422)
BDAKENFB_01545 2.2e-175 GT4 M Psort location Cytoplasmic, score 8.87
BDAKENFB_01546 3.2e-49 M Glycosyltransferase, group 1 family protein
BDAKENFB_01547 1.5e-61 S Glycosyltransferase, group 2 family protein
BDAKENFB_01548 5.6e-164 MA20_43635 M Capsular polysaccharide synthesis protein
BDAKENFB_01549 1.6e-177 M Glycosyl transferase, family 2
BDAKENFB_01550 2.8e-79 wcaB 2.3.1.30 E serine acetyltransferase
BDAKENFB_01552 1.7e-162 H Core-2/I-Branching enzyme
BDAKENFB_01553 2e-261 S Psort location CytoplasmicMembrane, score 9.99
BDAKENFB_01554 5.9e-50 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
BDAKENFB_01556 5e-107
BDAKENFB_01558 2.1e-14
BDAKENFB_01559 5.4e-190 wcoI DM Psort location CytoplasmicMembrane, score
BDAKENFB_01560 9.3e-224 pflA S Protein of unknown function (DUF4012)
BDAKENFB_01561 2e-85 3.1.3.48 T Low molecular weight phosphatase family
BDAKENFB_01562 2.2e-153 S Endonuclease/Exonuclease/phosphatase family
BDAKENFB_01563 3.4e-44
BDAKENFB_01564 4.7e-285 EGP Major facilitator Superfamily
BDAKENFB_01565 7.8e-241 T Diguanylate cyclase (GGDEF) domain protein
BDAKENFB_01566 1.4e-126 L Protein of unknown function (DUF1524)
BDAKENFB_01567 1.8e-164 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
BDAKENFB_01568 2.1e-241 mntH P H( )-stimulated, divalent metal cation uptake system
BDAKENFB_01569 4.4e-197 K helix_turn _helix lactose operon repressor
BDAKENFB_01570 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
BDAKENFB_01571 9.1e-168 G ABC transporter permease
BDAKENFB_01572 1.2e-97 E Transglutaminase-like superfamily
BDAKENFB_01573 4.7e-85 E Transglutaminase-like superfamily
BDAKENFB_01574 1.7e-218 S Protein of unknown function DUF58
BDAKENFB_01575 7e-227 S ATPase family associated with various cellular activities (AAA)
BDAKENFB_01576 0.0 S Fibronectin type 3 domain
BDAKENFB_01577 1.6e-263 KLT Protein tyrosine kinase
BDAKENFB_01578 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
BDAKENFB_01579 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
BDAKENFB_01580 1.7e-246 G Major Facilitator Superfamily
BDAKENFB_01581 1.6e-132 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
BDAKENFB_01582 1.1e-38 csoR S Metal-sensitive transcriptional repressor
BDAKENFB_01583 0.0 pacS 3.6.3.54 P E1-E2 ATPase
BDAKENFB_01584 4.7e-174 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BDAKENFB_01585 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BDAKENFB_01586 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
BDAKENFB_01587 3.2e-168
BDAKENFB_01588 0.0 O Type VII secretion system ESX-1, transport TM domain B
BDAKENFB_01589 5e-225 snm S WXG100 protein secretion system (Wss), protein YukD
BDAKENFB_01590 1.1e-47 esxU S Proteins of 100 residues with WXG
BDAKENFB_01591 1.5e-43 S Proteins of 100 residues with WXG
BDAKENFB_01593 3.2e-264 O Subtilase family
BDAKENFB_01594 1.2e-179
BDAKENFB_01595 1.9e-145
BDAKENFB_01596 3.7e-188
BDAKENFB_01597 4.4e-55
BDAKENFB_01598 1e-191
BDAKENFB_01599 2.8e-156 T Forkhead associated domain
BDAKENFB_01600 0.0 eccCa D FtsK/SpoIIIE family
BDAKENFB_01601 2.3e-254 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BDAKENFB_01602 5.2e-116 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
BDAKENFB_01603 3.2e-289 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
BDAKENFB_01604 1e-10
BDAKENFB_01605 2.4e-30 yuxJ EGP Major facilitator Superfamily
BDAKENFB_01606 6e-158 EGP Major facilitator Superfamily
BDAKENFB_01609 6.7e-185 L Phage integrase, N-terminal SAM-like domain
BDAKENFB_01610 6.3e-66 S Psort location Cytoplasmic, score 8.87
BDAKENFB_01611 4.6e-158 tetP J Elongation factor G, domain IV
BDAKENFB_01612 1.2e-171 tetP J elongation factor
BDAKENFB_01613 1.9e-89 XK26_06155 K Psort location Cytoplasmic, score
BDAKENFB_01614 6.7e-65 L Phage integrase, N-terminal SAM-like domain
BDAKENFB_01615 2.1e-12
BDAKENFB_01616 6.4e-188 L Psort location Cytoplasmic, score
BDAKENFB_01618 3.9e-08
BDAKENFB_01619 4.3e-35
BDAKENFB_01620 2.8e-254 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
BDAKENFB_01621 1.1e-58
BDAKENFB_01622 7.8e-255 S AAA domain
BDAKENFB_01623 3.7e-263 lytC 3.2.1.17, 3.2.1.96, 3.2.1.97 GH101 M Glycosyl hydrolases family 25
BDAKENFB_01624 1.9e-15 3.2.1.97 GH101 S CHAP domain
BDAKENFB_01625 7.2e-175 ykoT 2.4.1.83 GT2 M Glycosyl transferase family 2
BDAKENFB_01626 1.1e-300
BDAKENFB_01627 2e-196 3.1.1.5, 3.2.1.97 GH101 E GDSL-like Lipase/Acylhydrolase family
BDAKENFB_01628 5.5e-200 cps3I G Psort location CytoplasmicMembrane, score 9.99
BDAKENFB_01629 0.0 2.4.1.288 GT2 S Glycosyltransferase like family 2
BDAKENFB_01630 3.7e-210 M LicD family
BDAKENFB_01631 7.9e-137 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
BDAKENFB_01632 3.4e-181 GM GDP-mannose 4,6 dehydratase
BDAKENFB_01633 1.6e-146 rgpC U Transport permease protein
BDAKENFB_01634 3.5e-238 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
BDAKENFB_01635 1.5e-258 3.2.1.97 GH101 S Psort location Extracellular, score
BDAKENFB_01636 7.4e-207 S Predicted membrane protein (DUF2142)
BDAKENFB_01637 3.6e-37 3.2.1.97 GH101 M Cell wall-binding repeat protein
BDAKENFB_01638 1.1e-37
BDAKENFB_01639 6.6e-51 V HNH nucleases
BDAKENFB_01640 4.7e-165 J tRNA 5'-leader removal
BDAKENFB_01641 2.2e-16
BDAKENFB_01644 1.8e-07
BDAKENFB_01648 7.5e-50 A 3'-to-5' exoribonuclease specific for small oligoribonucleotides
BDAKENFB_01649 2e-78 V HNH endonuclease
BDAKENFB_01650 1.8e-24
BDAKENFB_01651 2.5e-140 K Transcriptional regulator
BDAKENFB_01652 1.9e-79 ssb1 L Single-strand binding protein family
BDAKENFB_01654 8.2e-35
BDAKENFB_01657 8.5e-37
BDAKENFB_01659 1.2e-125 K BRO family, N-terminal domain
BDAKENFB_01663 7.7e-14
BDAKENFB_01664 2.3e-103 dinD S SOS response
BDAKENFB_01665 1e-29
BDAKENFB_01666 1.9e-86
BDAKENFB_01667 3.7e-54 S PFAM Uncharacterised protein family UPF0150
BDAKENFB_01668 1e-34 N HicA toxin of bacterial toxin-antitoxin,
BDAKENFB_01669 1.2e-19 S Predicted membrane protein (DUF2335)
BDAKENFB_01670 8.8e-27 S Predicted membrane protein (DUF2335)
BDAKENFB_01671 7.4e-241 int L Phage integrase, N-terminal SAM-like domain
BDAKENFB_01672 4.5e-100 sixA 3.6.1.55 T Phosphoglycerate mutase family
BDAKENFB_01673 1.8e-198 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
BDAKENFB_01674 1.9e-158 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
BDAKENFB_01675 3.8e-248 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
BDAKENFB_01676 2e-74
BDAKENFB_01677 2.6e-307 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
BDAKENFB_01678 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
BDAKENFB_01679 2.5e-234 F Psort location CytoplasmicMembrane, score 10.00
BDAKENFB_01680 2.1e-218 luxE 6.2.1.19 H long-chain-fatty-acid--luciferin-component ligase, acyl-protein synthase
BDAKENFB_01681 4.5e-288 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
BDAKENFB_01682 2.5e-144 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
BDAKENFB_01683 1.5e-233 hemN H Involved in the biosynthesis of porphyrin-containing compound
BDAKENFB_01684 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
BDAKENFB_01685 2.9e-33 rpsT J Binds directly to 16S ribosomal RNA
BDAKENFB_01686 1.1e-133 S UPF0126 domain
BDAKENFB_01687 2.5e-227 ilvE 2.6.1.42 E Amino-transferase class IV
BDAKENFB_01689 9.1e-74 K Acetyltransferase (GNAT) domain
BDAKENFB_01690 3.2e-54 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BDAKENFB_01691 1.4e-92 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BDAKENFB_01692 1e-89 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
BDAKENFB_01693 3.8e-195 S alpha beta
BDAKENFB_01694 1.3e-25 yhjX EGP Major facilitator Superfamily
BDAKENFB_01695 2.6e-30 EGP Major facilitator Superfamily
BDAKENFB_01696 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BDAKENFB_01697 3.1e-189 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BDAKENFB_01699 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BDAKENFB_01700 3.3e-74 nrdI F Probably involved in ribonucleotide reductase function
BDAKENFB_01701 1.1e-39 nrdH O Glutaredoxin
BDAKENFB_01703 5.4e-121 K Bacterial regulatory proteins, tetR family
BDAKENFB_01704 3.5e-225 G Transmembrane secretion effector
BDAKENFB_01706 1.9e-269 S Psort location Cytoplasmic, score 8.87
BDAKENFB_01707 3.5e-258 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
BDAKENFB_01708 1.6e-43 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
BDAKENFB_01709 1.7e-202 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
BDAKENFB_01710 0.0 fadD 6.2.1.3 I AMP-binding enzyme
BDAKENFB_01711 2e-180 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BDAKENFB_01712 2e-250 corC S CBS domain
BDAKENFB_01713 9.4e-103 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BDAKENFB_01714 5.9e-208 phoH T PhoH-like protein
BDAKENFB_01715 1.8e-56 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
BDAKENFB_01716 5.9e-138 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
BDAKENFB_01718 3e-162 spoU 2.1.1.185 J SpoU rRNA Methylase family
BDAKENFB_01719 8.1e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BDAKENFB_01720 2.7e-108 yitW S Iron-sulfur cluster assembly protein
BDAKENFB_01721 2.6e-97 iscU C SUF system FeS assembly protein, NifU family
BDAKENFB_01722 9.4e-239 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BDAKENFB_01723 1e-142 sufC O FeS assembly ATPase SufC
BDAKENFB_01724 1.1e-233 sufD O FeS assembly protein SufD
BDAKENFB_01725 9.6e-291 sufB O FeS assembly protein SufB
BDAKENFB_01726 0.0 S L,D-transpeptidase catalytic domain
BDAKENFB_01727 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
BDAKENFB_01728 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 M Aamy_C
BDAKENFB_01729 4.9e-81 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
BDAKENFB_01730 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
BDAKENFB_01731 1.3e-221 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BDAKENFB_01732 2.7e-56 3.4.23.43 S Type IV leader peptidase family
BDAKENFB_01733 3.4e-190 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BDAKENFB_01734 2.7e-82 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BDAKENFB_01735 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BDAKENFB_01736 2.5e-36
BDAKENFB_01737 3.4e-59 WQ51_05790 S Bacterial protein of unknown function (DUF948)
BDAKENFB_01738 5.6e-129 pgm3 G Phosphoglycerate mutase family
BDAKENFB_01739 4.5e-51 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
BDAKENFB_01740 3.1e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
BDAKENFB_01741 1.9e-150 lolD V ABC transporter
BDAKENFB_01742 4.8e-216 V FtsX-like permease family
BDAKENFB_01743 1.7e-61 S Domain of unknown function (DUF4418)
BDAKENFB_01744 0.0 pcrA 3.6.4.12 L DNA helicase
BDAKENFB_01745 1.5e-106 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
BDAKENFB_01746 4.7e-244 pbuX F Permease family
BDAKENFB_01747 0.0 yrhL I Psort location CytoplasmicMembrane, score 9.99
BDAKENFB_01748 1.7e-232 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BDAKENFB_01749 2.7e-302 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
BDAKENFB_01750 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
BDAKENFB_01751 1.5e-302 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
BDAKENFB_01752 5.8e-76 yiaC K Acetyltransferase (GNAT) domain
BDAKENFB_01753 4.5e-71 yvbK 3.1.3.25 K Acetyltransferase (GNAT) domain
BDAKENFB_01755 8.4e-254 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
BDAKENFB_01757 2.6e-211 ykiI
BDAKENFB_01758 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
BDAKENFB_01759 1.5e-123 3.6.1.13 L NUDIX domain
BDAKENFB_01760 1.7e-173 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
BDAKENFB_01761 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BDAKENFB_01762 9.4e-101 pdtaR T Response regulator receiver domain protein
BDAKENFB_01763 3.3e-166 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
BDAKENFB_01765 5e-107 L Belongs to the 'phage' integrase family
BDAKENFB_01766 6.3e-56 3.1.21.3 V COG0732 Restriction endonuclease S subunits
BDAKENFB_01767 1.8e-37 hsdS 3.1.21.3 V type I restriction modification DNA specificity domain
BDAKENFB_01768 8e-245 hsdM 2.1.1.72 V HsdM N-terminal domain
BDAKENFB_01769 0.0 hsdR 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
BDAKENFB_01770 5.1e-37 pcrA1 3.6.4.12 F DNA helicase
BDAKENFB_01771 8.2e-101 E Binding-protein-dependent transport system inner membrane component
BDAKENFB_01772 1.4e-121 tcyA ET Bacterial periplasmic substrate-binding proteins
BDAKENFB_01773 3.2e-115 3.6.3.21 E ATPases associated with a variety of cellular activities
BDAKENFB_01774 2.7e-195 metC 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
BDAKENFB_01776 1.3e-18 relB L RelB antitoxin
BDAKENFB_01778 2.5e-305 pyk 2.7.1.40 G Pyruvate kinase
BDAKENFB_01779 8.8e-176 terC P Integral membrane protein, TerC family
BDAKENFB_01780 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
BDAKENFB_01781 9.1e-116 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BDAKENFB_01782 8.3e-255 rpsA J Ribosomal protein S1
BDAKENFB_01783 5.4e-161 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BDAKENFB_01784 5.9e-173 P Zinc-uptake complex component A periplasmic
BDAKENFB_01785 7.7e-160 znuC P ATPases associated with a variety of cellular activities
BDAKENFB_01786 1e-140 znuB U ABC 3 transport family
BDAKENFB_01787 7.8e-88 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
BDAKENFB_01788 3e-102 carD K CarD-like/TRCF domain
BDAKENFB_01789 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BDAKENFB_01790 7.8e-129 T Response regulator receiver domain protein
BDAKENFB_01791 6.8e-188 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
BDAKENFB_01792 8.5e-139 ctsW S Phosphoribosyl transferase domain
BDAKENFB_01793 1.1e-152 cof 5.2.1.8 T Eukaryotic phosphomannomutase
BDAKENFB_01794 1.5e-71 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
BDAKENFB_01795 9.7e-222
BDAKENFB_01796 0.0 S Glycosyl transferase, family 2
BDAKENFB_01797 3.4e-54 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
BDAKENFB_01798 3.7e-207 K Cell envelope-related transcriptional attenuator domain
BDAKENFB_01800 7.9e-163 K Cell envelope-related transcriptional attenuator domain
BDAKENFB_01801 0.0 D FtsK/SpoIIIE family
BDAKENFB_01802 1.9e-46 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
BDAKENFB_01803 3.4e-280 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
BDAKENFB_01804 2.7e-144 yplQ S Haemolysin-III related
BDAKENFB_01805 2.6e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
BDAKENFB_01806 1.2e-73 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
BDAKENFB_01807 6.5e-284 sdaA 4.3.1.17 E Serine dehydratase alpha chain
BDAKENFB_01808 1.5e-90
BDAKENFB_01810 1.2e-70 P Major Facilitator Superfamily
BDAKENFB_01812 1.3e-182 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
BDAKENFB_01813 7.5e-103 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
BDAKENFB_01814 1.3e-70 divIC D Septum formation initiator
BDAKENFB_01815 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
BDAKENFB_01816 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BDAKENFB_01817 1.7e-113 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
BDAKENFB_01818 5.4e-92 2.3.1.183 M Acetyltransferase (GNAT) domain
BDAKENFB_01819 0.0 S Uncharacterised protein family (UPF0182)
BDAKENFB_01820 1.8e-178 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
BDAKENFB_01821 6.2e-40 ybdD S Selenoprotein, putative
BDAKENFB_01822 0.0 cstA T 5TM C-terminal transporter carbon starvation CstA
BDAKENFB_01823 3.2e-53 azlD E Branched-chain amino acid transport protein (AzlD)
BDAKENFB_01824 1.4e-142 azlC E AzlC protein
BDAKENFB_01825 8.3e-82 M Protein of unknown function (DUF3737)
BDAKENFB_01826 1.8e-81 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
BDAKENFB_01827 9e-147 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
BDAKENFB_01828 2.6e-180 opcA G Glucose-6-phosphate dehydrogenase subunit
BDAKENFB_01829 3.6e-304 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BDAKENFB_01830 9.4e-219 patB 4.4.1.8 E Aminotransferase, class I II
BDAKENFB_01831 1.5e-146 S Belongs to the short-chain dehydrogenases reductases (SDR) family
BDAKENFB_01832 1.2e-277 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BDAKENFB_01833 0.0 lysX S Uncharacterised conserved protein (DUF2156)
BDAKENFB_01834 7.7e-242 S Putative esterase
BDAKENFB_01835 3.2e-142 ybbL V ATPases associated with a variety of cellular activities
BDAKENFB_01836 1.8e-134 ybbM V Uncharacterised protein family (UPF0014)
BDAKENFB_01837 6e-275 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
BDAKENFB_01838 1.3e-125 S Enoyl-(Acyl carrier protein) reductase
BDAKENFB_01839 6.4e-227 rutG F Permease family
BDAKENFB_01840 1.4e-155 3.1.3.73 G Phosphoglycerate mutase family
BDAKENFB_01841 3.3e-135 K helix_turn_helix, arabinose operon control protein
BDAKENFB_01842 3.5e-141 S Sulfite exporter TauE/SafE
BDAKENFB_01843 6.1e-68 S ECF transporter, substrate-specific component
BDAKENFB_01844 4.9e-79 2.7.1.48 F uridine kinase
BDAKENFB_01845 4.5e-158 korD 1.2.7.3 C Domain of unknown function (DUF362)
BDAKENFB_01846 1.6e-185 C Na H antiporter family protein
BDAKENFB_01847 1.1e-165 MA20_14895 S Conserved hypothetical protein 698
BDAKENFB_01848 1e-94
BDAKENFB_01849 1.8e-29
BDAKENFB_01850 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
BDAKENFB_01851 5.9e-12
BDAKENFB_01852 2e-17 yccF S Inner membrane component domain
BDAKENFB_01853 3.9e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
BDAKENFB_01854 1.6e-138 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BDAKENFB_01855 5.8e-263 pip 3.4.11.5 S alpha/beta hydrolase fold
BDAKENFB_01856 0.0 tcsS2 T Histidine kinase
BDAKENFB_01857 1.9e-130 K helix_turn_helix, Lux Regulon
BDAKENFB_01858 0.0 MV MacB-like periplasmic core domain
BDAKENFB_01859 5.1e-142 V ABC transporter, ATP-binding protein
BDAKENFB_01860 3.4e-191 K helix_turn_helix ASNC type
BDAKENFB_01861 2.6e-149 P Cobalt transport protein
BDAKENFB_01862 5.1e-306 3.6.3.24 P AAA domain, putative AbiEii toxin, Type IV TA system
BDAKENFB_01863 4.3e-95 XK27_01265 S ECF-type riboflavin transporter, S component
BDAKENFB_01864 1e-251 metY 2.5.1.49 E Aminotransferase class-V
BDAKENFB_01865 3.6e-165 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
BDAKENFB_01866 3.1e-83 yraN L Belongs to the UPF0102 family
BDAKENFB_01867 1e-292 comM O Magnesium chelatase, subunit ChlI C-terminal
BDAKENFB_01868 1e-254 dprA 5.99.1.2 LU DNA recombination-mediator protein A
BDAKENFB_01869 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
BDAKENFB_01870 2e-177 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
BDAKENFB_01871 4.8e-117 safC S O-methyltransferase
BDAKENFB_01872 3.3e-245 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
BDAKENFB_01875 6.1e-241 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BDAKENFB_01876 8.6e-125 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
BDAKENFB_01877 1e-113 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
BDAKENFB_01878 0.0 E ABC transporter, substrate-binding protein, family 5
BDAKENFB_01879 7.6e-251 EGP Major facilitator Superfamily
BDAKENFB_01880 1.6e-172 yjfF U Branched-chain amino acid transport system / permease component
BDAKENFB_01881 1.5e-181 ytfT U Branched-chain amino acid transport system / permease component
BDAKENFB_01882 6e-288 ytfR 3.6.3.17 G ATPases associated with a variety of cellular activities
BDAKENFB_01883 2.4e-165 G Periplasmic binding protein domain
BDAKENFB_01884 0.0 lpqB S Lipoprotein LpqB beta-propeller domain
BDAKENFB_01885 4.4e-286 mtrB 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BDAKENFB_01886 4.4e-134 KT Transcriptional regulatory protein, C terminal
BDAKENFB_01887 1.2e-250 rarA L Recombination factor protein RarA
BDAKENFB_01888 0.0 L DEAD DEAH box helicase
BDAKENFB_01889 4.3e-191 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
BDAKENFB_01890 1e-199 gluD E Binding-protein-dependent transport system inner membrane component
BDAKENFB_01891 1.8e-111 gluC E Binding-protein-dependent transport system inner membrane component
BDAKENFB_01892 1.4e-153 gluB ET Belongs to the bacterial solute-binding protein 3 family
BDAKENFB_01893 6.2e-137 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
BDAKENFB_01894 6.7e-139 glnQ 3.6.3.21 E ATPases associated with a variety of cellular activities
BDAKENFB_01895 7.1e-281 glnP E Binding-protein-dependent transport system inner membrane component
BDAKENFB_01896 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
BDAKENFB_01897 4.9e-249 hisS 6.1.1.21 J Histidyl-tRNA synthetase
BDAKENFB_01898 9.7e-216 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
BDAKENFB_01899 4.6e-140 3.5.2.10 S Creatinine amidohydrolase
BDAKENFB_01900 5e-246 proP EGP Sugar (and other) transporter
BDAKENFB_01901 2.3e-284 purR QT Purine catabolism regulatory protein-like family
BDAKENFB_01902 1.5e-255 codA 3.5.4.1, 3.5.4.21 F Amidohydrolase family
BDAKENFB_01903 0.0 clpC O ATPase family associated with various cellular activities (AAA)
BDAKENFB_01904 4.6e-188 uspA T Belongs to the universal stress protein A family
BDAKENFB_01905 1.2e-182 S Protein of unknown function (DUF3027)
BDAKENFB_01906 4.5e-67 cspB K 'Cold-shock' DNA-binding domain
BDAKENFB_01907 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
BDAKENFB_01908 6.8e-133 KT Response regulator receiver domain protein
BDAKENFB_01909 1.3e-124
BDAKENFB_01911 8.7e-290 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
BDAKENFB_01912 9.3e-68 S LytR cell envelope-related transcriptional attenuator
BDAKENFB_01913 4.4e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BDAKENFB_01914 4e-182 moxR S ATPase family associated with various cellular activities (AAA)
BDAKENFB_01915 4.2e-175 S Protein of unknown function DUF58
BDAKENFB_01916 3.6e-91
BDAKENFB_01917 1.8e-190 S von Willebrand factor (vWF) type A domain
BDAKENFB_01918 5e-182 S von Willebrand factor (vWF) type A domain
BDAKENFB_01919 8.3e-62
BDAKENFB_01920 1.6e-277 S PGAP1-like protein
BDAKENFB_01921 1.6e-279 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
BDAKENFB_01922 0.0 S Lysylphosphatidylglycerol synthase TM region
BDAKENFB_01923 1.4e-41 hup L Belongs to the bacterial histone-like protein family
BDAKENFB_01924 1.8e-57
BDAKENFB_01925 9.7e-141 C FMN binding
BDAKENFB_01926 6.7e-273 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
BDAKENFB_01927 6.1e-25 pup S Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
BDAKENFB_01928 1.3e-159 hisN 3.1.3.25 G Inositol monophosphatase family
BDAKENFB_01929 5.2e-303 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
BDAKENFB_01930 1.6e-280 arc O AAA ATPase forming ring-shaped complexes
BDAKENFB_01931 2.2e-122 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
BDAKENFB_01932 1.6e-177 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BDAKENFB_01933 2.9e-125 3.8.1.2 S Haloacid dehalogenase-like hydrolase
BDAKENFB_01934 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BDAKENFB_01935 2.7e-227 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BDAKENFB_01936 1.4e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
BDAKENFB_01937 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
BDAKENFB_01938 4e-107 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
BDAKENFB_01939 2.6e-169 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
BDAKENFB_01940 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BDAKENFB_01941 9.7e-233 carA 6.3.5.5 F Belongs to the CarA family
BDAKENFB_01942 1.8e-75 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BDAKENFB_01943 2e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BDAKENFB_01944 1.2e-232 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BDAKENFB_01945 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BDAKENFB_01946 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
BDAKENFB_01947 1.2e-61 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BDAKENFB_01948 8.1e-188 yocS S SBF-like CPA transporter family (DUF4137)
BDAKENFB_01950 7.5e-194 ltaE 4.1.2.48 E Beta-eliminating lyase
BDAKENFB_01951 6.5e-226 M Glycosyl transferase 4-like domain
BDAKENFB_01952 4.8e-227 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
BDAKENFB_01953 1.2e-137 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
BDAKENFB_01954 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
BDAKENFB_01955 1.7e-34
BDAKENFB_01956 1.4e-308 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
BDAKENFB_01957 1e-284 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BDAKENFB_01958 8.3e-185 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
BDAKENFB_01959 8.2e-235 purD 6.3.4.13 F Belongs to the GARS family
BDAKENFB_01960 2.1e-247 EGP Major facilitator Superfamily
BDAKENFB_01961 1.1e-183 rihB 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
BDAKENFB_01962 7.4e-138 1.1.1.1 C Iron-containing alcohol dehydrogenase
BDAKENFB_01963 1.9e-178 S Auxin Efflux Carrier
BDAKENFB_01964 0.0 pgi 5.3.1.9 G Belongs to the GPI family
BDAKENFB_01965 3e-60 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
BDAKENFB_01966 2.6e-123 lepB 3.4.21.89 U Belongs to the peptidase S26 family
BDAKENFB_01967 6.1e-137 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BDAKENFB_01968 5e-128 V ATPases associated with a variety of cellular activities
BDAKENFB_01969 2.5e-270 V Efflux ABC transporter, permease protein
BDAKENFB_01970 2.7e-166 mdcF S Transporter, auxin efflux carrier (AEC) family protein
BDAKENFB_01971 2e-230 dapE 3.5.1.18 E Peptidase dimerisation domain
BDAKENFB_01972 3.3e-308 rne 3.1.26.12 J Ribonuclease E/G family
BDAKENFB_01973 2.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
BDAKENFB_01974 2.6e-39 rpmA J Ribosomal L27 protein
BDAKENFB_01975 2.3e-311 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BDAKENFB_01976 3.7e-202 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BDAKENFB_01977 7.4e-233 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
BDAKENFB_01979 1.2e-32 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
BDAKENFB_01980 2.9e-129 nusG K Participates in transcription elongation, termination and antitermination
BDAKENFB_01981 2.3e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BDAKENFB_01982 3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
BDAKENFB_01983 5.9e-143 QT PucR C-terminal helix-turn-helix domain
BDAKENFB_01984 0.0
BDAKENFB_01985 5e-162 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
BDAKENFB_01986 2.1e-79 bioY S BioY family
BDAKENFB_01987 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
BDAKENFB_01988 0.0 pccB I Carboxyl transferase domain
BDAKENFB_01989 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
BDAKENFB_01990 1.2e-82 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
BDAKENFB_01991 0.0 ams 2.4.1.4, 3.2.1.1, 5.4.99.16 GH13 G Alpha amylase, catalytic domain
BDAKENFB_01993 2.4e-116
BDAKENFB_01994 1.7e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BDAKENFB_01995 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
BDAKENFB_01996 1.7e-91 lemA S LemA family
BDAKENFB_01997 0.0 S Predicted membrane protein (DUF2207)
BDAKENFB_01998 9.7e-171 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
BDAKENFB_01999 7e-297 yegQ O Peptidase family U32 C-terminal domain
BDAKENFB_02000 4.1e-184 yfiH Q Multi-copper polyphenol oxidoreductase laccase
BDAKENFB_02001 5.5e-144 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
BDAKENFB_02002 3.4e-126 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
BDAKENFB_02003 1.3e-58 D nuclear chromosome segregation
BDAKENFB_02004 5.1e-267 pepC 3.4.22.40 E Peptidase C1-like family
BDAKENFB_02005 1.1e-211 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BDAKENFB_02006 1.3e-221 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BDAKENFB_02007 1.8e-122 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BDAKENFB_02008 2.8e-220 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
BDAKENFB_02009 3.4e-129 KT Transcriptional regulatory protein, C terminal
BDAKENFB_02010 1.4e-196 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
BDAKENFB_02011 1.3e-163 pstC P probably responsible for the translocation of the substrate across the membrane
BDAKENFB_02012 4e-168 pstA P Phosphate transport system permease
BDAKENFB_02013 3.6e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BDAKENFB_02014 1.8e-143 P Zinc-uptake complex component A periplasmic
BDAKENFB_02015 1.3e-246 pbuO S Permease family
BDAKENFB_02016 1.1e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BDAKENFB_02017 2.4e-36 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
BDAKENFB_02018 4.7e-175 T Forkhead associated domain
BDAKENFB_02019 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
BDAKENFB_02020 4.8e-36
BDAKENFB_02021 1.5e-92 flgA NO SAF
BDAKENFB_02022 1.3e-29 fmdB S Putative regulatory protein
BDAKENFB_02023 1.4e-100 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
BDAKENFB_02024 2.3e-130 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
BDAKENFB_02025 8.3e-152
BDAKENFB_02026 2.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BDAKENFB_02030 5.5e-25 rpmG J Ribosomal protein L33
BDAKENFB_02031 5.4e-204 murB 1.3.1.98 M Cell wall formation
BDAKENFB_02032 1.3e-266 E aromatic amino acid transport protein AroP K03293
BDAKENFB_02033 8.3e-59 fdxA C 4Fe-4S binding domain
BDAKENFB_02034 3.9e-215 dapC E Aminotransferase class I and II
BDAKENFB_02035 0.0 E Bacterial extracellular solute-binding proteins, family 5 Middle
BDAKENFB_02036 3.1e-181 EP Binding-protein-dependent transport system inner membrane component
BDAKENFB_02037 1.1e-140 EP Binding-protein-dependent transport system inner membrane component
BDAKENFB_02038 5.1e-156 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
BDAKENFB_02039 2.8e-151 dppF E ABC transporter
BDAKENFB_02040 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
BDAKENFB_02042 0.0 G Psort location Cytoplasmic, score 8.87
BDAKENFB_02043 1.4e-233 3.2.1.156 GH8 G CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
BDAKENFB_02044 0.0 G candidate polyfunctional acetylxylan esterase b-xylosidase A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein K01238
BDAKENFB_02045 8.7e-297 CE10 I Belongs to the type-B carboxylesterase lipase family
BDAKENFB_02047 4.4e-223 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BDAKENFB_02048 4.7e-252 M Bacterial capsule synthesis protein PGA_cap
BDAKENFB_02049 7.3e-186 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BDAKENFB_02050 8.1e-114 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
BDAKENFB_02051 4.6e-110
BDAKENFB_02052 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
BDAKENFB_02053 2.4e-80 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BDAKENFB_02054 3.4e-67 rpsI J Belongs to the universal ribosomal protein uS9 family
BDAKENFB_02055 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
BDAKENFB_02056 2.8e-177 tdh 1.1.1.14 C Zinc-binding dehydrogenase
BDAKENFB_02057 3.2e-226 EGP Major facilitator Superfamily
BDAKENFB_02058 1.6e-75 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BDAKENFB_02059 1e-215 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
BDAKENFB_02060 2.8e-235 EGP Major facilitator Superfamily
BDAKENFB_02061 9.5e-197 Z012_01000 1.1.1.14, 1.1.1.9 C Zinc-binding dehydrogenase
BDAKENFB_02062 2.1e-182 rhaR_1 K helix_turn_helix, arabinose operon control protein
BDAKENFB_02063 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
BDAKENFB_02064 5.2e-50 rpsJ J Involved in the binding of tRNA to the ribosomes
BDAKENFB_02065 2.3e-116 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BDAKENFB_02066 1.4e-116 rplD J Forms part of the polypeptide exit tunnel
BDAKENFB_02067 6.8e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
BDAKENFB_02068 6.1e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BDAKENFB_02069 1.3e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BDAKENFB_02070 1.9e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BDAKENFB_02071 1e-97 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BDAKENFB_02072 1.7e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BDAKENFB_02073 5e-38 rpmC J Belongs to the universal ribosomal protein uL29 family
BDAKENFB_02074 4.9e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BDAKENFB_02075 3e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BDAKENFB_02076 8.7e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BDAKENFB_02077 7.5e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BDAKENFB_02078 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BDAKENFB_02079 5.5e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BDAKENFB_02080 3.8e-96 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BDAKENFB_02081 3.3e-59 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BDAKENFB_02082 1.2e-92 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BDAKENFB_02083 3.4e-25 rpmD J Ribosomal protein L30p/L7e
BDAKENFB_02084 3.7e-73 rplO J binds to the 23S rRNA
BDAKENFB_02085 9.9e-239 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
BDAKENFB_02086 5.5e-98 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
BDAKENFB_02087 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BDAKENFB_02088 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
BDAKENFB_02089 3.3e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BDAKENFB_02090 1.9e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BDAKENFB_02091 4.7e-185 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BDAKENFB_02092 7.8e-64 rplQ J Ribosomal protein L17
BDAKENFB_02093 8.5e-165 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
BDAKENFB_02095 4.7e-104
BDAKENFB_02096 6.1e-191 nusA K Participates in both transcription termination and antitermination
BDAKENFB_02097 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BDAKENFB_02098 2.2e-69 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BDAKENFB_02099 5.1e-188 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BDAKENFB_02100 5.2e-218 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
BDAKENFB_02101 4.1e-251 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BDAKENFB_02102 3.8e-108
BDAKENFB_02104 2.4e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BDAKENFB_02105 5.1e-213 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BDAKENFB_02106 3e-251 T GHKL domain
BDAKENFB_02107 2.1e-151 T LytTr DNA-binding domain
BDAKENFB_02108 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
BDAKENFB_02109 0.0 crr G pts system, glucose-specific IIABC component
BDAKENFB_02110 2.8e-157 arbG K CAT RNA binding domain
BDAKENFB_02111 9.8e-200 I Diacylglycerol kinase catalytic domain
BDAKENFB_02112 1.2e-247 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
BDAKENFB_02114 4.6e-188 yegU O ADP-ribosylglycohydrolase
BDAKENFB_02115 8.3e-190 yegV G pfkB family carbohydrate kinase
BDAKENFB_02116 4.1e-270 U Permease for cytosine/purines, uracil, thiamine, allantoin
BDAKENFB_02117 1.5e-103 Q Isochorismatase family
BDAKENFB_02118 2.3e-214 S Choline/ethanolamine kinase
BDAKENFB_02119 2.5e-275 eat E Amino acid permease
BDAKENFB_02120 5.3e-264 gabT 2.6.1.19, 2.6.1.22 H Aminotransferase class-III
BDAKENFB_02121 5.6e-141 yidP K UTRA
BDAKENFB_02122 1.9e-121 degU K helix_turn_helix, Lux Regulon
BDAKENFB_02123 4.8e-264 tcsS3 KT PspC domain
BDAKENFB_02124 8.9e-148 pspC KT PspC domain
BDAKENFB_02125 2.7e-92
BDAKENFB_02126 2e-115 S Protein of unknown function (DUF4125)
BDAKENFB_02127 0.0 S Domain of unknown function (DUF4037)
BDAKENFB_02128 1.7e-213 araJ EGP Major facilitator Superfamily
BDAKENFB_02130 0.0 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
BDAKENFB_02131 1.2e-191 K helix_turn _helix lactose operon repressor
BDAKENFB_02132 3.7e-249 G Psort location CytoplasmicMembrane, score 10.00
BDAKENFB_02133 4.1e-99 S Serine aminopeptidase, S33
BDAKENFB_02134 4.3e-206 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
BDAKENFB_02135 2.9e-139 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BDAKENFB_02136 0.0 4.2.1.53 S MCRA family
BDAKENFB_02137 7.4e-89 phoU P Plays a role in the regulation of phosphate uptake
BDAKENFB_02138 1.1e-215 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
BDAKENFB_02139 3.9e-59 L Helix-turn-helix domain
BDAKENFB_02140 3.7e-131 insK L Integrase core domain

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)