ORF_ID e_value Gene_name EC_number CAZy COGs Description
LBMMPJFA_00001 0.0 copB 3.6.3.4 P P-type ATPase
LBMMPJFA_00002 1.6e-88 L Transposase
LBMMPJFA_00003 6.6e-94 L Transposase
LBMMPJFA_00004 1.5e-194 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
LBMMPJFA_00005 2.3e-170 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
LBMMPJFA_00006 2.7e-219 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
LBMMPJFA_00007 1.5e-95 cysE 2.3.1.30 E Bacterial transferase hexapeptide (six repeats)
LBMMPJFA_00008 6.6e-94 L Transposase
LBMMPJFA_00009 1.6e-88 L Transposase
LBMMPJFA_00010 8.8e-223 L Transposase
LBMMPJFA_00011 4.8e-157 glcU U Glucose uptake
LBMMPJFA_00012 1.8e-08 4.2.1.53 S Myosin-crossreactive antigen
LBMMPJFA_00013 5.9e-79 hsdM 2.1.1.72 V HsdM N-terminal domain
LBMMPJFA_00014 2.2e-101 XK27_10720 D peptidase activity
LBMMPJFA_00015 3.1e-292 adcA P Belongs to the bacterial solute-binding protein 9 family
LBMMPJFA_00016 1.7e-08
LBMMPJFA_00018 1.2e-172 yeiH S Membrane
LBMMPJFA_00019 5.5e-119 mur1 NU muramidase
LBMMPJFA_00020 1.9e-83 L transposition
LBMMPJFA_00021 2.6e-166 cpsY K Transcriptional regulator
LBMMPJFA_00022 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
LBMMPJFA_00023 1.2e-57 phnA P Alkylphosphonate utilization operon protein PhnA
LBMMPJFA_00024 2e-104 artQ P ABC transporter (Permease
LBMMPJFA_00025 1.8e-113 glnQ 3.6.3.21 E abc transporter atp-binding protein
LBMMPJFA_00026 1.1e-158 aatB ET ABC transporter substrate-binding protein
LBMMPJFA_00027 3.5e-40 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LBMMPJFA_00028 2.5e-139 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LBMMPJFA_00029 1.7e-57 adhP 1.1.1.1 C alcohol dehydrogenase
LBMMPJFA_00030 1.3e-106 adhP 1.1.1.1 C alcohol dehydrogenase
LBMMPJFA_00031 9.3e-20 sthIM 2.1.1.72 L Adenine specific DNA methylase Mod
LBMMPJFA_00032 3.9e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
LBMMPJFA_00033 4.5e-126 gntR1 K transcriptional
LBMMPJFA_00034 1.1e-53 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
LBMMPJFA_00035 1.3e-269 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LBMMPJFA_00036 4.1e-87 niaX
LBMMPJFA_00037 8.6e-90 niaR S small molecule binding protein (contains 3H domain)
LBMMPJFA_00038 6.9e-127 K DNA-binding helix-turn-helix protein
LBMMPJFA_00039 1.4e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LBMMPJFA_00040 1.5e-135 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LBMMPJFA_00041 4.1e-167 GK ROK family
LBMMPJFA_00042 8.3e-159 dprA LU DNA protecting protein DprA
LBMMPJFA_00043 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LBMMPJFA_00044 1.4e-150 S TraX protein
LBMMPJFA_00045 2.2e-122 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LBMMPJFA_00046 2.4e-251 T PhoQ Sensor
LBMMPJFA_00047 6.6e-259 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
LBMMPJFA_00048 1.1e-152 XK27_05470 E Methionine synthase
LBMMPJFA_00049 1.7e-75 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
LBMMPJFA_00050 2.7e-48 pspE P Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LBMMPJFA_00051 1.8e-51 IQ Acetoin reductase
LBMMPJFA_00052 3.9e-19 IQ Acetoin reductase
LBMMPJFA_00053 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
LBMMPJFA_00054 1.8e-156 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
LBMMPJFA_00057 1.3e-212 pqqE C radical SAM domain protein
LBMMPJFA_00058 3.9e-136 speB 3.5.3.11 E hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
LBMMPJFA_00059 6.6e-61 EGP Major facilitator Superfamily
LBMMPJFA_00060 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
LBMMPJFA_00061 3e-133 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
LBMMPJFA_00062 8.6e-196 L Transposase
LBMMPJFA_00063 6.4e-104 V ABC transporter (Permease
LBMMPJFA_00064 8.4e-112 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
LBMMPJFA_00065 1.6e-10
LBMMPJFA_00066 1.2e-97 K Transcriptional regulator, TetR family
LBMMPJFA_00067 1.2e-158 czcD P cation diffusion facilitator family transporter
LBMMPJFA_00068 2.7e-210 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
LBMMPJFA_00069 6.2e-196 adhB 1.1.1.1, 1.1.1.14 E Dehydrogenase
LBMMPJFA_00070 6e-08 S Hydrolases of the alpha beta superfamily
LBMMPJFA_00071 7.9e-17 S Alpha/beta hydrolase of unknown function (DUF915)
LBMMPJFA_00072 3.8e-78 S Alpha/beta hydrolase of unknown function (DUF915)
LBMMPJFA_00073 1.6e-249 L Transposase
LBMMPJFA_00076 2.6e-143 2.4.2.3 F Phosphorylase superfamily
LBMMPJFA_00077 4.1e-118 gph 3.1.3.18 S HAD hydrolase, family IA, variant 1
LBMMPJFA_00078 9.4e-15 yclQ P ABC-type enterochelin transport system, periplasmic component
LBMMPJFA_00079 3.3e-19 yclQ P ABC-type enterochelin transport system, periplasmic component
LBMMPJFA_00080 6.6e-73 dinF V Mate efflux family protein
LBMMPJFA_00081 4.8e-41 dinF V Mate efflux family protein
LBMMPJFA_00083 2.3e-309 FbpA K RNA-binding protein homologous to eukaryotic snRNP
LBMMPJFA_00084 3.7e-190
LBMMPJFA_00085 3.1e-89 FNV0100 F Belongs to the Nudix hydrolase family
LBMMPJFA_00086 3.5e-28 3.4.13.21 I Protein conserved in bacteria
LBMMPJFA_00088 5.7e-118 S TraX protein
LBMMPJFA_00089 1.3e-96 thiJ 2.7.11.1, 3.5.1.124 S DJ-1 family
LBMMPJFA_00090 1.3e-148 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
LBMMPJFA_00091 3.2e-175 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
LBMMPJFA_00092 4.7e-143 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LBMMPJFA_00093 3.7e-54 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LBMMPJFA_00094 6.8e-133 cas6 S Pfam:DUF2276
LBMMPJFA_00095 0.0 csm1 S CRISPR-associated protein Csm1 family
LBMMPJFA_00096 5.6e-62 csm2 L Pfam:DUF310
LBMMPJFA_00097 1.1e-116 csm3 L RAMP superfamily
LBMMPJFA_00098 5.8e-166 csm4 L CRISPR-associated RAMP protein, Csm4 family
LBMMPJFA_00099 4.4e-205 csm5 L CRISPR-associated RAMP protein, Csm5 family
LBMMPJFA_00100 2.1e-14 csm6 S Psort location Cytoplasmic, score
LBMMPJFA_00101 5.2e-74 csm6 S Psort location Cytoplasmic, score
LBMMPJFA_00102 7e-127 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
LBMMPJFA_00103 7.5e-112 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LBMMPJFA_00104 1.2e-63 nylA 3.5.1.4 J Belongs to the amidase family
LBMMPJFA_00106 2.5e-267 dtpT E transporter
LBMMPJFA_00107 1e-103 nylA 3.5.1.4 J Belongs to the amidase family
LBMMPJFA_00108 8.8e-134 yckB ET Belongs to the bacterial solute-binding protein 3 family
LBMMPJFA_00109 1.8e-67 yecS P ABC transporter (Permease
LBMMPJFA_00111 8.1e-114 sasH 3.1.3.5, 3.6.1.45 F Belongs to the 5'-nucleotidase family
LBMMPJFA_00112 9.8e-35 3.1.3.6, 3.1.4.16 F nucleotide catabolic process
LBMMPJFA_00113 5.4e-104 yfiF3 K sequence-specific DNA binding
LBMMPJFA_00114 1.9e-147 L Transposase
LBMMPJFA_00115 1.6e-247 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
LBMMPJFA_00116 1.8e-240 agcS E (Alanine) symporter
LBMMPJFA_00117 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
LBMMPJFA_00118 4.6e-241 metY 2.5.1.49 E o-acetylhomoserine
LBMMPJFA_00119 1.8e-59 Q phosphatase activity
LBMMPJFA_00120 9.3e-62 S haloacid dehalogenase-like hydrolase
LBMMPJFA_00121 3.5e-88 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
LBMMPJFA_00122 1.1e-110 hsdS2 2.1.1.72 V Type I restriction modification DNA specificity domain
LBMMPJFA_00123 1.7e-96 XK27_04775 S hemerythrin HHE cation binding domain
LBMMPJFA_00124 2.6e-49 XK27_04775 S hemerythrin HHE cation binding domain
LBMMPJFA_00125 4.9e-151 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LBMMPJFA_00126 5.3e-175 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
LBMMPJFA_00127 1.4e-71 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
LBMMPJFA_00128 1.9e-43 yktA S Belongs to the UPF0223 family
LBMMPJFA_00129 5e-142 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
LBMMPJFA_00130 3e-256 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
LBMMPJFA_00131 3.3e-158 pstS P phosphate
LBMMPJFA_00132 1.8e-154 pstC P probably responsible for the translocation of the substrate across the membrane
LBMMPJFA_00133 2e-155 pstA P phosphate transport system permease
LBMMPJFA_00134 5.2e-150 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LBMMPJFA_00135 6.7e-23 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LBMMPJFA_00136 9.4e-86 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LBMMPJFA_00137 2.4e-113 phoU P Plays a role in the regulation of phosphate uptake
LBMMPJFA_00138 0.0 pepN 3.4.11.2 E aminopeptidase
LBMMPJFA_00139 7e-195 xerS D Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division
LBMMPJFA_00140 1.3e-187 lplA 6.3.1.20 H Lipoate-protein ligase
LBMMPJFA_00141 1.1e-17
LBMMPJFA_00142 3.7e-09
LBMMPJFA_00143 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
LBMMPJFA_00144 3.4e-304 malQ 2.4.1.25 GH77 G 4-alpha-glucanotransferase
LBMMPJFA_00145 2.3e-23 L Transposase
LBMMPJFA_00146 4.6e-25 tatA U protein secretion
LBMMPJFA_00147 5.8e-121 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LBMMPJFA_00148 1.1e-300 ywbL P COG0672 High-affinity Fe2 Pb2 permease
LBMMPJFA_00149 5.6e-233 ycdB P peroxidase
LBMMPJFA_00150 7.1e-153 ycdO P periplasmic lipoprotein involved in iron transport
LBMMPJFA_00151 3e-34 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
LBMMPJFA_00152 3.7e-85 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
LBMMPJFA_00153 1.7e-60 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
LBMMPJFA_00154 1.5e-65 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
LBMMPJFA_00155 2.4e-134 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
LBMMPJFA_00156 1.9e-37 3.5.1.28 NU amidase activity
LBMMPJFA_00157 8.5e-266 3.5.1.28 NU amidase activity
LBMMPJFA_00158 3.6e-82 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
LBMMPJFA_00159 2.6e-20 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
LBMMPJFA_00160 0.0 lpdA 1.8.1.4 C Dehydrogenase
LBMMPJFA_00161 1.8e-198 acoC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
LBMMPJFA_00162 3.7e-182 acoB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
LBMMPJFA_00163 6e-185 acoA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
LBMMPJFA_00164 5e-38 P membrane protein (DUF2207)
LBMMPJFA_00165 2.8e-65 S the current gene model (or a revised gene model) may contain a frame shift
LBMMPJFA_00166 3.7e-235 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
LBMMPJFA_00167 2.9e-127 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LBMMPJFA_00168 8.6e-218 yeaB K Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LBMMPJFA_00169 1.2e-157 rssA S Phospholipase, patatin family
LBMMPJFA_00170 3.9e-78 estA E GDSL-like protein
LBMMPJFA_00171 2.6e-15 estA E Lysophospholipase L1 and related esterases
LBMMPJFA_00172 3.7e-293 S unusual protein kinase
LBMMPJFA_00173 4.9e-39 S granule-associated protein
LBMMPJFA_00174 7.9e-138 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LBMMPJFA_00175 5.8e-28 bglH 3.2.1.86 GT1 G beta-glucosidase activity
LBMMPJFA_00176 1.3e-199 S hmm pf01594
LBMMPJFA_00177 1.6e-44 G alpha-ribazole phosphatase activity
LBMMPJFA_00178 2e-33 G Belongs to the phosphoglycerate mutase family
LBMMPJFA_00179 1.1e-25 G Belongs to the phosphoglycerate mutase family
LBMMPJFA_00180 8.8e-66 pgm G Belongs to the phosphoglycerate mutase family
LBMMPJFA_00181 1.7e-80 supH 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
LBMMPJFA_00182 4.9e-94 V VanZ like family
LBMMPJFA_00183 8.1e-23 L Transposase
LBMMPJFA_00184 3.2e-92 L Transposase
LBMMPJFA_00185 6.4e-33 cpsJ S Glycosyltransferase like family 2
LBMMPJFA_00186 3e-15
LBMMPJFA_00187 1.1e-71 M Glycosyltransferase sugar-binding region containing DXD motif
LBMMPJFA_00188 1.9e-41 pssE S Glycosyltransferase family 28 C-terminal domain
LBMMPJFA_00189 1.4e-72 cpsF M Oligosaccharide biosynthesis protein Alg14 like
LBMMPJFA_00190 1.2e-70 rfbP 2.7.8.6 M Bacterial sugar transferase
LBMMPJFA_00191 3.3e-37 L transposase activity
LBMMPJFA_00192 4e-60 L COG2801 Transposase and inactivated derivatives
LBMMPJFA_00193 2.4e-30 tra981A L Integrase core domain
LBMMPJFA_00194 8.1e-52 tnp L DDE domain
LBMMPJFA_00195 1.4e-235 cps1C S Polysaccharide biosynthesis protein
LBMMPJFA_00196 9.1e-110 L Transposase
LBMMPJFA_00197 2.4e-93 L Transposase
LBMMPJFA_00198 6.9e-96 2.7.8.12 GT2 S Glycosyltransferase like family 2
LBMMPJFA_00199 3e-139 L Integrase core domain
LBMMPJFA_00200 2.2e-22 L Transposase
LBMMPJFA_00201 1.7e-27 tnp L DDE domain
LBMMPJFA_00202 8.5e-23 rgpAc GT4 M group 1 family protein
LBMMPJFA_00203 5.7e-250 cpsE M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
LBMMPJFA_00204 5.3e-112 cpsD D COG0489 ATPases involved in chromosome partitioning
LBMMPJFA_00205 2.6e-105 cps4C M biosynthesis protein
LBMMPJFA_00206 3e-136 cpsB 3.1.3.48 GM Capsular polysaccharide biosynthesis protein
LBMMPJFA_00207 3.8e-252 cps4A K Cell envelope-like function transcriptional attenuator common domain protein
LBMMPJFA_00208 2.4e-130 deoD 2.4.2.1, 2.4.2.28 F purine nucleoside phosphorylase
LBMMPJFA_00209 1.7e-48 yfeJ 6.3.5.2 F glutamine amidotransferase
LBMMPJFA_00210 2.5e-43 yfeJ 6.3.5.2 F glutamine amidotransferase
LBMMPJFA_00211 3.6e-40 clcA_2 P chloride
LBMMPJFA_00212 3.8e-42 clcA_2 P chloride channel
LBMMPJFA_00213 7.5e-149 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
LBMMPJFA_00214 9.3e-236 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
LBMMPJFA_00215 6.6e-122 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LBMMPJFA_00217 4e-21 V Glucan-binding protein C
LBMMPJFA_00218 1e-110 ung2 3.2.2.27 L Uracil-DNA glycosylase
LBMMPJFA_00219 2.4e-275 pepV 3.5.1.18 E Dipeptidase
LBMMPJFA_00220 3.2e-26 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
LBMMPJFA_00221 6.9e-86 XK27_03610 K Gnat family
LBMMPJFA_00222 9.1e-10 L COG1943 Transposase and inactivated derivatives
LBMMPJFA_00223 1.5e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LBMMPJFA_00224 2.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
LBMMPJFA_00225 3.5e-86 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LBMMPJFA_00226 2.8e-120 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
LBMMPJFA_00227 3.9e-15 M LysM domain
LBMMPJFA_00228 2.9e-90 ebsA S Family of unknown function (DUF5322)
LBMMPJFA_00229 1.8e-234 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
LBMMPJFA_00230 4.2e-98 lepB 3.4.21.89 U Belongs to the peptidase S26 family
LBMMPJFA_00231 4.9e-224 G COG0457 FOG TPR repeat
LBMMPJFA_00232 1.1e-175 yubA S permease
LBMMPJFA_00233 3.5e-93 mutX 3.6.1.55 F NTP pyrophosphohydrolases including oxidative damage repair enzymes
LBMMPJFA_00234 3.6e-163 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
LBMMPJFA_00235 2.5e-124 ftsE D cell division ATP-binding protein FtsE
LBMMPJFA_00236 1.8e-181 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
LBMMPJFA_00237 1.2e-202 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LBMMPJFA_00238 4.3e-180 yjjH S Calcineurin-like phosphoesterase
LBMMPJFA_00239 5.2e-136 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
LBMMPJFA_00240 0.0 pacL 3.6.3.8 P cation transport ATPase
LBMMPJFA_00241 2.6e-67 ywiB S Domain of unknown function (DUF1934)
LBMMPJFA_00242 6.3e-51 XK27_00115 2.3.1.128 K acetyltransferase
LBMMPJFA_00243 9.2e-147 yidA S hydrolases of the HAD superfamily
LBMMPJFA_00244 9e-231 murM 2.3.2.10, 2.3.2.16 V protein involved in methicillin resistance
LBMMPJFA_00245 5e-35 F Protein of unknown function (DUF454)
LBMMPJFA_00246 2.1e-154 vicX 3.1.26.11 S Metal-dependent hydrolases of the beta-lactamase superfamily I
LBMMPJFA_00247 1.5e-247 vicK 2.7.13.3 T Histidine kinase
LBMMPJFA_00248 9.9e-129 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LBMMPJFA_00249 1e-139 glnQ 3.6.3.21 E abc transporter atp-binding protein
LBMMPJFA_00250 3.5e-149 peb1A ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
LBMMPJFA_00251 8e-115 gltJ P ABC transporter (Permease
LBMMPJFA_00252 4.2e-110 tcyB_2 P ABC transporter (permease)
LBMMPJFA_00253 1.4e-124 endA F DNA RNA non-specific endonuclease
LBMMPJFA_00254 1.2e-25 epuA S DNA-directed RNA polymerase subunit beta
LBMMPJFA_00255 7.2e-231 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LBMMPJFA_00257 3.7e-193 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
LBMMPJFA_00258 4.9e-21 G Domain of unknown function (DUF4832)
LBMMPJFA_00259 8.4e-53 G Domain of unknown function (DUF4832)
LBMMPJFA_00260 1.5e-211 cotH M CotH kinase protein
LBMMPJFA_00261 6.8e-185 pelG M Putative exopolysaccharide Exporter (EPS-E)
LBMMPJFA_00262 1.9e-109 pelF GT4 M Domain of unknown function (DUF3492)
LBMMPJFA_00263 7.6e-160 pelF GT4 M Domain of unknown function (DUF3492)
LBMMPJFA_00264 0.0 S Uncharacterised protein conserved in bacteria (DUF2194)
LBMMPJFA_00265 4.1e-143
LBMMPJFA_00266 7.6e-134 5.1.3.2 GM Psort location CytoplasmicMembrane, score
LBMMPJFA_00267 2.9e-196 L Transposase
LBMMPJFA_00268 2.2e-63 L Transposase
LBMMPJFA_00269 1.2e-88 L Transposase
LBMMPJFA_00270 2.1e-203 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LBMMPJFA_00271 4.2e-175 birA 6.3.4.15 HK Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
LBMMPJFA_00272 3.2e-295 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LBMMPJFA_00273 1.6e-88 ytsP 1.8.4.14 T GAF domain-containing protein
LBMMPJFA_00274 1.9e-164 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LBMMPJFA_00275 1.2e-19 WQ51_02665 S Protein of unknown function (DUF3042)
LBMMPJFA_00277 7.7e-35
LBMMPJFA_00280 7.8e-202 S Phage integrase family
LBMMPJFA_00282 8.5e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
LBMMPJFA_00283 4.3e-133 XK27_05110 P chloride
LBMMPJFA_00284 1.2e-61 XK27_05110 P chloride
LBMMPJFA_00285 8.7e-41 pheA 1.3.1.12, 2.3.1.79, 4.2.1.51, 5.4.99.5 E Chorismate mutase
LBMMPJFA_00286 1.3e-282 clcA P Chloride transporter, ClC family
LBMMPJFA_00287 6.7e-75 fld C Flavodoxin
LBMMPJFA_00289 4.7e-126 XK27_08875 O Zinc-dependent metalloprotease
LBMMPJFA_00290 3.5e-151 estA CE1 S Putative esterase
LBMMPJFA_00291 1e-309 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LBMMPJFA_00292 1.2e-135 XK27_08845 S abc transporter atp-binding protein
LBMMPJFA_00293 4e-148 XK27_08840 S Belongs to the binding-protein-dependent transport system permease family
LBMMPJFA_00294 3.3e-178 XK27_08835 S ABC transporter substrate binding protein
LBMMPJFA_00295 3.2e-17 S Domain of unknown function (DUF4649)
LBMMPJFA_00297 6.9e-30 Q the current gene model (or a revised gene model) may contain a frame shift
LBMMPJFA_00298 4.3e-24 Q the current gene model (or a revised gene model) may contain a frame shift
LBMMPJFA_00299 3.2e-09 Q the current gene model (or a revised gene model) may contain a frame shift
LBMMPJFA_00300 8.8e-223 L Transposase
LBMMPJFA_00302 1.6e-249 L Transposase
LBMMPJFA_00303 1.3e-276 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
LBMMPJFA_00304 1.2e-188 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
LBMMPJFA_00305 0.0 dnaE 2.7.7.7 L DNA polymerase
LBMMPJFA_00306 1.4e-152 sua5 2.7.7.87 J Belongs to the SUA5 family
LBMMPJFA_00307 3.1e-112 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LBMMPJFA_00308 6.8e-275 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LBMMPJFA_00309 2.5e-43 ysdA L Membrane
LBMMPJFA_00310 6.6e-190 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
LBMMPJFA_00311 3.4e-291 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LBMMPJFA_00312 3e-130 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LBMMPJFA_00313 3.6e-179 pyrD 1.3.1.14, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate
LBMMPJFA_00315 2.8e-39 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
LBMMPJFA_00316 1.7e-83 ypmS S Protein conserved in bacteria
LBMMPJFA_00317 6e-144 ypmR E lipolytic protein G-D-S-L family
LBMMPJFA_00318 1e-148 DegV S DegV family
LBMMPJFA_00319 5.8e-305 recN L May be involved in recombinational repair of damaged DNA
LBMMPJFA_00320 1.8e-72 argR K Regulates arginine biosynthesis genes
LBMMPJFA_00321 5e-159 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
LBMMPJFA_00322 3e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
LBMMPJFA_00323 3.5e-29 xseB 3.1.11.6 L exodeoxyribonuclease VII activity
LBMMPJFA_00324 1.2e-247 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LBMMPJFA_00327 3.4e-120 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LBMMPJFA_00328 2.9e-125 dnaD
LBMMPJFA_00329 9.3e-183 metA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LBMMPJFA_00330 2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LBMMPJFA_00331 0.0 recJ L Single-strand DNA-specific exonuclease, C terminal domain
LBMMPJFA_00332 6.7e-139 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
LBMMPJFA_00333 9.2e-175 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
LBMMPJFA_00334 4.2e-118 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
LBMMPJFA_00335 7.1e-223 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LBMMPJFA_00336 1.6e-239 rodA D Belongs to the SEDS family
LBMMPJFA_00337 4.5e-49 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
LBMMPJFA_00338 5.5e-61 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LBMMPJFA_00339 1.9e-133 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
LBMMPJFA_00340 5e-128 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
LBMMPJFA_00341 1.2e-109 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LBMMPJFA_00342 1.5e-106 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
LBMMPJFA_00343 1.1e-234 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LBMMPJFA_00344 2.3e-116 hisG 2.4.2.17 E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
LBMMPJFA_00345 5.7e-183 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
LBMMPJFA_00346 2.1e-196 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LBMMPJFA_00348 4.2e-86 L Integrase core domain protein
LBMMPJFA_00349 1.1e-53 L transposition
LBMMPJFA_00350 1.8e-21 L Transposase
LBMMPJFA_00351 5.2e-36 L transposase activity
LBMMPJFA_00352 1.3e-22 XK27_08085
LBMMPJFA_00353 5.6e-92 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
LBMMPJFA_00354 2.3e-09 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
LBMMPJFA_00355 2e-140 hisK 3.1.3.15 E Histidinol phosphatase and related hydrolases of the PHP family
LBMMPJFA_00356 1.1e-121 ylfI S tigr01906
LBMMPJFA_00357 5.9e-143 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
LBMMPJFA_00358 1.5e-143 fat 3.1.2.21 I Acyl-ACP thioesterase
LBMMPJFA_00359 4.1e-217 hemN H Involved in the biosynthesis of porphyrin-containing compound
LBMMPJFA_00362 1.9e-205 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
LBMMPJFA_00363 8.3e-113 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
LBMMPJFA_00364 1.9e-161 rfbA 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LBMMPJFA_00365 1.1e-206 yurR 1.4.5.1 E oxidoreductase
LBMMPJFA_00366 5.7e-102 zupT P Mediates zinc uptake. May also transport other divalent cations
LBMMPJFA_00367 9.6e-149 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LBMMPJFA_00368 2.7e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
LBMMPJFA_00369 1.7e-70 gtrA S GtrA-like protein
LBMMPJFA_00370 1.5e-250 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LBMMPJFA_00371 6e-169 ybbR S Protein conserved in bacteria
LBMMPJFA_00372 5.6e-124 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
LBMMPJFA_00373 7.5e-255 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain protein
LBMMPJFA_00374 8.7e-150 cobQ S glutamine amidotransferase
LBMMPJFA_00375 0.0 mprF 2.3.2.3 J Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
LBMMPJFA_00376 2.2e-131 pip 1.11.1.10 S Alpha beta hydrolase
LBMMPJFA_00377 0.0 uup S abc transporter atp-binding protein
LBMMPJFA_00378 2.1e-114 udk 2.7.1.48 F Cytidine monophosphokinase
LBMMPJFA_00379 2.1e-178 yfmL 3.6.4.13 L DEAD DEAH box helicase
LBMMPJFA_00380 2.1e-28 6.3.2.2, 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
LBMMPJFA_00381 8.6e-265 gapN 1.2.1.9 C Belongs to the aldehyde dehydrogenase family
LBMMPJFA_00382 6.2e-249 L Transposase
LBMMPJFA_00383 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LBMMPJFA_00384 7.9e-39 ptsH G phosphocarrier protein Hpr
LBMMPJFA_00385 3.3e-222 icd 1.1.1.42 C Isocitrate dehydrogenase
LBMMPJFA_00386 5.1e-212 citZ 2.3.3.1 C Belongs to the citrate synthase family
LBMMPJFA_00387 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LBMMPJFA_00388 2.2e-34 nrdH O Glutaredoxin
LBMMPJFA_00389 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LBMMPJFA_00390 1.7e-184 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LBMMPJFA_00392 4.2e-71 L Transposase (IS116 IS110 IS902 family)
LBMMPJFA_00393 3.3e-26 L Transposase (IS116 IS110 IS902 family)
LBMMPJFA_00394 1.2e-164 ypuA S secreted protein
LBMMPJFA_00395 1.1e-55 yaeR E COG0346 LactoylglutaTHIone lyase and related lyases
LBMMPJFA_00396 5.1e-131 srtA 3.4.22.70 M Sortase (surface protein transpeptidase)
LBMMPJFA_00397 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LBMMPJFA_00398 1.1e-181 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
LBMMPJFA_00399 3.4e-258 noxE P NADH oxidase
LBMMPJFA_00400 1.9e-294 yfmM S abc transporter atp-binding protein
LBMMPJFA_00401 3.3e-82 XK27_01265 S ECF-type riboflavin transporter, S component
LBMMPJFA_00402 8.7e-85 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
LBMMPJFA_00403 4.5e-44 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
LBMMPJFA_00404 2e-86 S ECF-type riboflavin transporter, S component
LBMMPJFA_00406 5e-240 XK27_08130 K Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
LBMMPJFA_00407 2e-55 nrdD_1 1.1.98.6, 1.17.4.1 F Ribonucleoside-triphosphate reductase
LBMMPJFA_00410 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LBMMPJFA_00411 9.9e-94 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LBMMPJFA_00412 1.1e-197 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LBMMPJFA_00413 0.0 smc D Required for chromosome condensation and partitioning
LBMMPJFA_00414 8.4e-125 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
LBMMPJFA_00415 6.6e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LBMMPJFA_00416 1.1e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LBMMPJFA_00417 2.4e-92 pat 2.3.1.183 M acetyltransferase
LBMMPJFA_00418 1.1e-12
LBMMPJFA_00419 8.9e-30
LBMMPJFA_00420 9e-278 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LBMMPJFA_00421 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
LBMMPJFA_00422 3.1e-127 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 E hydrolase
LBMMPJFA_00423 1.2e-62 bioY S biotin transmembrane transporter activity
LBMMPJFA_00424 9.8e-88 proW P Binding-protein-dependent transport system inner membrane component
LBMMPJFA_00425 1.5e-138 proV E abc transporter atp-binding protein
LBMMPJFA_00426 4.4e-169 proX M ABC transporter, substrate-binding protein, QAT family
LBMMPJFA_00427 3e-111 proWZ P ABC transporter (Permease
LBMMPJFA_00428 1.2e-280 hutH 4.3.1.3 E Histidine ammonia-lyase
LBMMPJFA_00429 1.6e-205 S Protein of unknown function (DUF917)
LBMMPJFA_00430 1.3e-309 hutU 4.2.1.49 E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
LBMMPJFA_00431 1.6e-59 sdaAB 4.3.1.17 E L-serine dehydratase
LBMMPJFA_00432 4.4e-101 desR K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
LBMMPJFA_00433 1.5e-192 desK 2.7.13.3 T Histidine kinase
LBMMPJFA_00434 1.4e-133 yvfS V ABC-2 type transporter
LBMMPJFA_00435 8.7e-159 XK27_09825 V abc transporter atp-binding protein
LBMMPJFA_00438 8.1e-163 yocS S Transporter
LBMMPJFA_00439 1.2e-82 cdd 2.4.2.4, 3.5.4.5 F cytidine deaminase activity
LBMMPJFA_00440 7.5e-115 yvfS V Transporter
LBMMPJFA_00441 3.9e-151 XK27_09825 V abc transporter atp-binding protein
LBMMPJFA_00442 2.7e-14 liaI KT membrane
LBMMPJFA_00443 2.6e-30 liaI KT membrane
LBMMPJFA_00444 6e-99 XK27_05000 S Fe-S-cluster oxidoreductase
LBMMPJFA_00445 0.0 V ABC transporter (permease)
LBMMPJFA_00446 1.9e-133 macB2 V ABC transporter, ATP-binding protein
LBMMPJFA_00447 3.1e-165 T Histidine kinase
LBMMPJFA_00448 4.6e-123 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LBMMPJFA_00449 2e-77 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
LBMMPJFA_00450 3.3e-69 pbuX F xanthine permease
LBMMPJFA_00451 9.2e-119 pbuX F xanthine permease
LBMMPJFA_00452 1.5e-247 norM V Multidrug efflux pump
LBMMPJFA_00453 4.3e-188 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LBMMPJFA_00454 1.3e-235 brnQ E Component of the transport system for branched-chain amino acids
LBMMPJFA_00455 9.4e-65 manA 5.3.1.8 G mannose-6-phosphate isomerase
LBMMPJFA_00456 8.2e-57 manA 5.3.1.8 G mannose-6-phosphate isomerase
LBMMPJFA_00457 4.8e-25 csbD K CsbD-like
LBMMPJFA_00458 6.2e-228 yfnA E amino acid
LBMMPJFA_00459 5.1e-110 XK27_02070 S nitroreductase
LBMMPJFA_00460 9.5e-150 1.13.11.2 S glyoxalase
LBMMPJFA_00461 5.6e-77 ywnA K Transcriptional regulator
LBMMPJFA_00462 9.5e-158 E Alpha/beta hydrolase of unknown function (DUF915)
LBMMPJFA_00463 1.9e-231 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LBMMPJFA_00464 1.4e-110 drgA C Nitroreductase
LBMMPJFA_00465 3e-102 yoaK S Protein of unknown function (DUF1275)
LBMMPJFA_00467 6.8e-161 yvgN C reductase
LBMMPJFA_00468 1.7e-179 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
LBMMPJFA_00469 3.6e-282 XK27_07020 S Belongs to the UPF0371 family
LBMMPJFA_00471 1.1e-37 BP1961 P nitric oxide dioxygenase activity
LBMMPJFA_00472 1.4e-54 K response regulator
LBMMPJFA_00473 9.3e-72 S Signal peptide protein, YSIRK family
LBMMPJFA_00475 4.5e-61
LBMMPJFA_00476 1.8e-270 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LBMMPJFA_00477 1e-137
LBMMPJFA_00478 5.3e-12 IQ PFAM AMP-dependent synthetase and ligase
LBMMPJFA_00479 2.7e-12 IQ PFAM AMP-dependent synthetase and ligase
LBMMPJFA_00480 5.8e-109 MA20_06410 E LysE type translocator
LBMMPJFA_00481 5.6e-08
LBMMPJFA_00482 2.7e-09
LBMMPJFA_00483 0.0 M family 8
LBMMPJFA_00485 1.5e-162 hrtB V MacB-like periplasmic core domain
LBMMPJFA_00486 1.8e-65 devA 3.6.3.25 V abc transporter atp-binding protein
LBMMPJFA_00487 1.1e-151 V MatE
LBMMPJFA_00489 3.9e-110 C Fe-S oxidoreductases
LBMMPJFA_00490 1.2e-176 EGP Major Facilitator Superfamily
LBMMPJFA_00491 5.5e-258 I radical SAM domain protein
LBMMPJFA_00493 6.5e-159 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
LBMMPJFA_00494 1.4e-150 L Integrase core domain protein
LBMMPJFA_00495 1.8e-87 L transposase activity
LBMMPJFA_00497 2.8e-85
LBMMPJFA_00498 0.0 sbcC L ATPase involved in DNA repair
LBMMPJFA_00499 6.9e-231 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
LBMMPJFA_00500 0.0 lacL 3.2.1.23 G -beta-galactosidase
LBMMPJFA_00501 0.0 lacS G transporter
LBMMPJFA_00502 6.4e-201 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
LBMMPJFA_00503 6.6e-195 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
LBMMPJFA_00504 4e-289 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
LBMMPJFA_00505 1.6e-221 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
LBMMPJFA_00506 2.3e-184 galR K Transcriptional regulator
LBMMPJFA_00507 2.7e-08 L Integrase core domain protein
LBMMPJFA_00508 1.2e-25 L transposition
LBMMPJFA_00509 3.5e-228 zmpB M M26 IgA1-specific Metallo-endopeptidase C-terminal region
LBMMPJFA_00510 6.7e-17 rtxA M M26 IgA1-specific Metallo-endopeptidase C-terminal region
LBMMPJFA_00511 2.5e-101 V abc transporter atp-binding protein
LBMMPJFA_00512 4.3e-40 V abc transporter atp-binding protein
LBMMPJFA_00513 0.0 gshF 6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
LBMMPJFA_00514 6.4e-62 L Transposase
LBMMPJFA_00515 7e-150 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
LBMMPJFA_00516 1.8e-33 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
LBMMPJFA_00517 1.7e-120 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
LBMMPJFA_00518 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
LBMMPJFA_00519 5.9e-188 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
LBMMPJFA_00520 1.4e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
LBMMPJFA_00521 5.8e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LBMMPJFA_00524 2.2e-114 vraR K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
LBMMPJFA_00525 5.8e-175 vraS 2.7.13.3 T Histidine kinase
LBMMPJFA_00526 3.7e-120 yvqF KT membrane
LBMMPJFA_00527 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
LBMMPJFA_00528 2e-132 stp 3.1.3.16 T phosphatase
LBMMPJFA_00529 4.4e-247 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LBMMPJFA_00530 2.5e-172 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LBMMPJFA_00531 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LBMMPJFA_00532 2.7e-46 rpoZ 2.7.7.6 K DNA-directed 5'-3' RNA polymerase activity
LBMMPJFA_00533 9.8e-112 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
LBMMPJFA_00534 2.8e-212 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
LBMMPJFA_00535 3.4e-149 XK27_02985 S overlaps another CDS with the same product name
LBMMPJFA_00536 2.1e-148 supH S overlaps another CDS with the same product name
LBMMPJFA_00537 8.6e-63 yvoA_1 K Transcriptional
LBMMPJFA_00538 2.8e-120 skfE V abc transporter atp-binding protein
LBMMPJFA_00539 3.3e-133 V ATPase activity
LBMMPJFA_00540 4.3e-172 oppF P Belongs to the ABC transporter superfamily
LBMMPJFA_00541 2.2e-204 oppD P Belongs to the ABC transporter superfamily
LBMMPJFA_00542 4.9e-168 amiD P ABC transporter (Permease
LBMMPJFA_00543 4.2e-278 amiC P ABC transporter (Permease
LBMMPJFA_00544 0.0 amiA E ABC transporter, substrate-binding protein, family 5
LBMMPJFA_00545 1.5e-65
LBMMPJFA_00546 7.3e-130 L Transposase
LBMMPJFA_00547 0.0 amiA E ABC transporter, substrate-binding protein, family 5
LBMMPJFA_00548 8.1e-45 L Transposase
LBMMPJFA_00549 4.1e-158 L COG2801 Transposase and inactivated derivatives
LBMMPJFA_00550 1.2e-24 oppF P Belongs to the ABC transporter superfamily
LBMMPJFA_00551 3.8e-45 oppF P Belongs to the ABC transporter superfamily
LBMMPJFA_00552 1.4e-40 tatD L Hydrolase, tatd
LBMMPJFA_00553 6.7e-218 oxlT P COG0477 Permeases of the major facilitator superfamily
LBMMPJFA_00554 1e-110 L Integrase core domain protein
LBMMPJFA_00555 1.1e-23 L transposase activity
LBMMPJFA_00556 8.9e-18 L transposase activity
LBMMPJFA_00557 1.4e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
LBMMPJFA_00558 9.8e-174 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
LBMMPJFA_00559 5.4e-150 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LBMMPJFA_00560 5.5e-121 yjbM 2.7.6.5 S Gtp pyrophosphokinase
LBMMPJFA_00561 1.5e-103 yjbK S Adenylate cyclase
LBMMPJFA_00562 2.1e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LBMMPJFA_00563 7e-206 iscS 2.8.1.7 E Cysteine desulfurase
LBMMPJFA_00564 2e-58 XK27_04120 S Putative amino acid metabolism
LBMMPJFA_00565 5.7e-118 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
LBMMPJFA_00566 1.6e-131 puuD T peptidase C26
LBMMPJFA_00567 6.2e-120 radC E Belongs to the UPF0758 family
LBMMPJFA_00568 4.9e-272 rgpF M Rhamnan synthesis protein F
LBMMPJFA_00569 9e-223 rgpD 3.6.3.38 P Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
LBMMPJFA_00570 6.4e-140 rgpC GM Transport permease protein
LBMMPJFA_00571 2e-169 rgpB GT2 M Glycosyltransferase, group 2 family protein
LBMMPJFA_00572 1.1e-222 rgpA GT4 M Domain of unknown function (DUF1972)
LBMMPJFA_00573 5e-174 S Glucosyl transferase GtrII
LBMMPJFA_00574 1.8e-28 S Glucosyl transferase GtrII
LBMMPJFA_00575 8.1e-219 GT4 M transferase activity, transferring glycosyl groups
LBMMPJFA_00576 2e-217 M Psort location CytoplasmicMembrane, score
LBMMPJFA_00577 0.0 rgpF GT2,GT4 M Glycosyltransferase like family 2
LBMMPJFA_00578 5.9e-151 2.4.1.60 S Glycosyltransferase group 2 family protein
LBMMPJFA_00579 4.6e-42 S Uncharacterized conserved protein (DUF2304)
LBMMPJFA_00580 4.5e-129 arnC M group 2 family protein
LBMMPJFA_00581 1.1e-181 cpsIaJ S Glycosyltransferase like family 2
LBMMPJFA_00582 1e-184 S Glycosyltransferase like family 2
LBMMPJFA_00583 9.4e-223 amrA S membrane protein involved in the export of O-antigen and teichoic acid
LBMMPJFA_00584 1.5e-160 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
LBMMPJFA_00585 5.8e-109 S Predicted membrane protein (DUF2142)
LBMMPJFA_00586 4e-114 S Predicted membrane protein (DUF2142)
LBMMPJFA_00587 1.7e-173 yfdH GT2 M COG0463, glycosyltransferases involved in cell wall biogenesis
LBMMPJFA_00588 3.4e-55 yitW K metal-sulfur cluster biosynthetic enzyme
LBMMPJFA_00589 1.1e-201 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
LBMMPJFA_00590 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
LBMMPJFA_00591 5.5e-20 rpsU J Belongs to the bacterial ribosomal protein bS21 family
LBMMPJFA_00592 1.1e-136 gltS ET Belongs to the bacterial solute-binding protein 3 family
LBMMPJFA_00593 2.1e-202 arcT 2.6.1.1 E Aminotransferase
LBMMPJFA_00594 9.4e-136 ET ABC transporter
LBMMPJFA_00595 1.1e-142 ET Belongs to the bacterial solute-binding protein 3 family
LBMMPJFA_00596 2.9e-84 mutT 3.6.1.55 F Nudix family
LBMMPJFA_00597 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
LBMMPJFA_00599 1.2e-55 V CAAX protease self-immunity
LBMMPJFA_00600 2.6e-32 S CAAX amino terminal protease family protein
LBMMPJFA_00601 0.0 glnP P ABC-type amino acid transport signal transduction systems periplasmic component domain
LBMMPJFA_00602 1e-136 glnQ 3.6.3.21 E abc transporter atp-binding protein
LBMMPJFA_00603 2.4e-16 XK27_00735
LBMMPJFA_00604 1.4e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LBMMPJFA_00606 7.3e-135 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
LBMMPJFA_00609 5.5e-65 paaI Q protein possibly involved in aromatic compounds catabolism
LBMMPJFA_00610 6.6e-30 ycaO O OsmC-like protein
LBMMPJFA_00612 1.7e-154 EG Permeases of the drug metabolite transporter (DMT) superfamily
LBMMPJFA_00614 5.6e-110 csn2 S CRISPR-associated protein (Cas_Csn2)
LBMMPJFA_00615 3.5e-52 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LBMMPJFA_00616 1.5e-163 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LBMMPJFA_00617 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
LBMMPJFA_00618 6.7e-116 serB 3.1.3.3 E phosphoserine phosphatase
LBMMPJFA_00619 3.2e-298 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
LBMMPJFA_00620 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LBMMPJFA_00621 2.6e-109 3.1.3.18 S IA, variant 1
LBMMPJFA_00622 2.2e-117 lrgB M effector of murein hydrolase
LBMMPJFA_00623 2.2e-58 lrgA S Effector of murein hydrolase LrgA
LBMMPJFA_00625 5.4e-59 arsC 1.20.4.1 P Belongs to the ArsC family
LBMMPJFA_00626 1.5e-52 ogt 2.1.1.63, 3.2.2.20 L methylated-DNA-[protein]-cysteine S-methyltransferase activity
LBMMPJFA_00627 7e-220 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LBMMPJFA_00628 3.9e-104 wecD M Acetyltransferase GNAT family
LBMMPJFA_00629 1.3e-209 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
LBMMPJFA_00630 5.1e-96 GK ROK family
LBMMPJFA_00631 8.1e-72 gloA 4.4.1.5 E Lactoylglutathione lyase
LBMMPJFA_00632 1.7e-47 XK27_08050 O stress-induced mitochondrial fusion
LBMMPJFA_00633 1.3e-19 XK27_08050 O HflC and HflK could regulate a protease
LBMMPJFA_00634 2.3e-206 potD P spermidine putrescine ABC transporter
LBMMPJFA_00635 3e-134 potC P ABC-type spermidine putrescine transport system, permease component II
LBMMPJFA_00636 3.7e-140 potB P ABC-type spermidine putrescine transport system, permease component I
LBMMPJFA_00637 1.2e-213 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
LBMMPJFA_00638 7.8e-171 murB 1.3.1.98 M cell wall formation
LBMMPJFA_00639 2.9e-87 folK 2.7.6.3, 4.1.2.25 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LBMMPJFA_00640 1.2e-61 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LBMMPJFA_00641 1.2e-298 amy 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
LBMMPJFA_00642 7e-147 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LBMMPJFA_00643 1e-99 folE 3.5.4.16 F gtp cyclohydrolase
LBMMPJFA_00644 0.0 ydaO E amino acid
LBMMPJFA_00645 1.1e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
LBMMPJFA_00646 4.1e-37 ylqC L Belongs to the UPF0109 family
LBMMPJFA_00647 2.4e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
LBMMPJFA_00648 6.9e-172 tehB 2.1.1.265 PQ tellurite resistance protein tehb
LBMMPJFA_00649 8.2e-159 xth 3.1.11.2 L exodeoxyribonuclease III
LBMMPJFA_00650 2.1e-74 S QueT transporter
LBMMPJFA_00651 1.9e-55 L Transposase
LBMMPJFA_00652 5.7e-186 yegS 2.7.1.107 I Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
LBMMPJFA_00653 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LBMMPJFA_00654 3.7e-85 ccl S cog cog4708
LBMMPJFA_00655 7.4e-164 rbn E Belongs to the UPF0761 family
LBMMPJFA_00656 1.5e-166 map 3.4.11.18 E Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed
LBMMPJFA_00657 3.3e-231 ytoI K transcriptional regulator containing CBS domains
LBMMPJFA_00658 2.4e-98 XK27_07830 2.3.1.128 J Acetyltransferase GNAT Family
LBMMPJFA_00659 1e-232 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LBMMPJFA_00660 0.0 comEC S Competence protein ComEC
LBMMPJFA_00661 2.2e-96 comEA L COG1555 DNA uptake protein and related DNA-binding proteins
LBMMPJFA_00662 2.9e-57 plsC 2.3.1.51 I Acyltransferase
LBMMPJFA_00663 6.1e-71 plsC 2.3.1.51 I Acyltransferase
LBMMPJFA_00664 1.7e-77 nodB3 G polysaccharide deacetylase
LBMMPJFA_00665 4.1e-22 nodB3 G polysaccharide deacetylase
LBMMPJFA_00666 2.3e-139 yabB 2.1.1.223 L Methyltransferase
LBMMPJFA_00667 1e-41 yazA L endonuclease containing a URI domain
LBMMPJFA_00668 3.2e-252 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
LBMMPJFA_00669 2.3e-154 corA P CorA-like protein
LBMMPJFA_00670 1.9e-62 yjqA S Bacterial PH domain
LBMMPJFA_00671 7.8e-100 thiT S Thiamine transporter
LBMMPJFA_00672 2.1e-157 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
LBMMPJFA_00673 1.9e-201 yjbB G Permeases of the major facilitator superfamily
LBMMPJFA_00674 3.1e-300 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
LBMMPJFA_00675 1.4e-121 ywaF S Integral membrane protein (intg_mem_TP0381)
LBMMPJFA_00676 3e-259 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
LBMMPJFA_00680 1.1e-155 cjaA ET ABC transporter substrate-binding protein
LBMMPJFA_00681 1.7e-134 glnQ 3.6.3.21 E abc transporter atp-binding protein
LBMMPJFA_00682 3e-106 P ABC transporter (Permease
LBMMPJFA_00683 6e-115 papP P ABC transporter (Permease
LBMMPJFA_00684 1.7e-193 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
LBMMPJFA_00685 4.7e-31 copZ 2.7.7.77 P Heavy metal-associated domain protein
LBMMPJFA_00686 0.0 copA 3.6.3.54 P P-type ATPase
LBMMPJFA_00687 2.7e-73 copY K Copper transport repressor, CopY TcrY family
LBMMPJFA_00688 2.1e-143 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
LBMMPJFA_00689 1.1e-228 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
LBMMPJFA_00690 3.3e-98 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E belongs to the TrpF family
LBMMPJFA_00691 2.5e-133 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
LBMMPJFA_00692 7.8e-180 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LBMMPJFA_00693 8e-105 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH anthranilate
LBMMPJFA_00694 2.8e-257 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LBMMPJFA_00695 3.7e-42 pchB 2.5.1.19, 4.2.1.10, 4.2.99.21, 5.4.99.5 E Chorismate mutase
LBMMPJFA_00696 3.2e-56
LBMMPJFA_00697 0.0 ctpE P E1-E2 ATPase
LBMMPJFA_00698 2e-25
LBMMPJFA_00699 1.2e-43 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LBMMPJFA_00700 9.7e-28 L transposase activity
LBMMPJFA_00701 2.7e-129 K transcriptional regulator, MerR family
LBMMPJFA_00702 1.4e-104 dnaQ 2.7.7.7 L DNA polymerase III
LBMMPJFA_00703 1.2e-41 WQ51_02910 S Protein of unknown function, DUF536
LBMMPJFA_00704 7.4e-64 XK27_02560 S cog cog2151
LBMMPJFA_00705 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
LBMMPJFA_00706 7.7e-227 ytfP S Flavoprotein
LBMMPJFA_00708 3.1e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
LBMMPJFA_00709 1.2e-151 ytmP 2.7.1.89 M Phosphotransferase
LBMMPJFA_00710 2.7e-183 ecsB U ABC transporter
LBMMPJFA_00711 2.3e-133 ecsA V abc transporter atp-binding protein
LBMMPJFA_00712 3.9e-72 hit FG Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
LBMMPJFA_00713 5.6e-12
LBMMPJFA_00714 2.6e-55 S CD20-like family
LBMMPJFA_00715 2.1e-106
LBMMPJFA_00717 0.0 clpL O ATP-dependent Clp protease ATP-binding subunit
LBMMPJFA_00718 6.9e-206 ylbM S Belongs to the UPF0348 family
LBMMPJFA_00719 2e-140 yqeM Q Methyltransferase domain protein
LBMMPJFA_00720 6e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
LBMMPJFA_00721 1.4e-107 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
LBMMPJFA_00722 3.1e-118 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LBMMPJFA_00723 3.5e-49 yhbY J RNA-binding protein
LBMMPJFA_00724 1.7e-215 yqeH S in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
LBMMPJFA_00725 1.8e-98 yqeG S hydrolase of the HAD superfamily
LBMMPJFA_00726 2.6e-153 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
LBMMPJFA_00727 1.3e-57
LBMMPJFA_00728 2.3e-273 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LBMMPJFA_00729 3.5e-269 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
LBMMPJFA_00730 1.4e-47 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LBMMPJFA_00731 1.8e-23 2.4.1.52 GT4 M transferase activity, transferring glycosyl groups
LBMMPJFA_00732 6.3e-31 M lipopolysaccharide 3-alpha-galactosyltransferase activity
LBMMPJFA_00733 1e-148 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LBMMPJFA_00734 5.1e-77 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LBMMPJFA_00735 3.6e-96 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LBMMPJFA_00736 3.7e-154 hlpA M Belongs to the NlpA lipoprotein family
LBMMPJFA_00737 6.8e-101 pncA Q isochorismatase
LBMMPJFA_00738 1.2e-140 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
LBMMPJFA_00739 3.7e-240 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase
LBMMPJFA_00740 2.4e-75 XK27_03180 T universal stress protein
LBMMPJFA_00743 2e-157 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LBMMPJFA_00744 2e-239 hlyX S COG1253 Hemolysins and related proteins containing CBS domains
LBMMPJFA_00745 2.4e-144 modF 3.6.3.21, 3.6.3.34 P abc transporter atp-binding protein
LBMMPJFA_00746 0.0 yjcE P NhaP-type Na H and K H antiporters
LBMMPJFA_00748 1.4e-98 ytqB 2.1.1.176 J (SAM)-dependent
LBMMPJFA_00749 1.3e-184 yhcC S radical SAM protein
LBMMPJFA_00750 2.2e-196 ylbL T Belongs to the peptidase S16 family
LBMMPJFA_00751 2.7e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LBMMPJFA_00752 5.1e-93 rsmD 2.1.1.171 L Methyltransferase
LBMMPJFA_00753 1.9e-172 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
LBMMPJFA_00754 1.5e-09 S Protein of unknown function (DUF4059)
LBMMPJFA_00755 6.5e-131 tcyN 3.6.3.21 E abc transporter atp-binding protein
LBMMPJFA_00756 4.7e-163 yxeN P ABC transporter (Permease
LBMMPJFA_00757 1.5e-152 yxeM ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
LBMMPJFA_00759 3.1e-206 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LBMMPJFA_00760 0.0 pflB 2.3.1.54 C formate acetyltransferase'
LBMMPJFA_00761 1.8e-147 cah 4.2.1.1 P carbonic anhydrase
LBMMPJFA_00762 2.1e-85 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LBMMPJFA_00763 1e-44 hsdS_1 3.1.21.3 V type I restriction modification DNA specificity domain
LBMMPJFA_00764 2.9e-87 D nuclear chromosome segregation
LBMMPJFA_00765 1.5e-127 ybbM S transport system, permease component
LBMMPJFA_00766 1.2e-117 ybbL S abc transporter atp-binding protein
LBMMPJFA_00767 4.5e-185 ampC V COG1680 Beta-lactamase class C and other penicillin binding proteins
LBMMPJFA_00768 4.6e-140 cppA E CppA N-terminal
LBMMPJFA_00769 5e-44 V CAAX protease self-immunity
LBMMPJFA_00770 2.3e-164 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
LBMMPJFA_00771 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
LBMMPJFA_00774 3e-47 spiA K sequence-specific DNA binding
LBMMPJFA_00775 2.9e-28 blpT
LBMMPJFA_00776 6.7e-98 blpT
LBMMPJFA_00777 3.9e-122 L Transposase
LBMMPJFA_00778 1.2e-165 L integrase core domain
LBMMPJFA_00783 4.3e-25 S Bacteriocin class II with double-glycine leader peptide
LBMMPJFA_00786 8.9e-133 agrA KT phosphorelay signal transduction system
LBMMPJFA_00787 3e-235 blpH 2.7.13.3 T protein histidine kinase activity
LBMMPJFA_00789 7.3e-237 mesE M Transport protein ComB
LBMMPJFA_00790 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
LBMMPJFA_00791 0.0 mdlB V abc transporter atp-binding protein
LBMMPJFA_00792 0.0 mdlA V abc transporter atp-binding protein
LBMMPJFA_00794 1.7e-93 XK27_09885 V Glycopeptide antibiotics resistance protein
LBMMPJFA_00795 7.9e-224 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
LBMMPJFA_00796 2.3e-72 yutD J protein conserved in bacteria
LBMMPJFA_00797 4.3e-269 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
LBMMPJFA_00799 7.2e-221 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
LBMMPJFA_00800 6.3e-185 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LBMMPJFA_00801 0.0 ftsI 3.4.16.4 M penicillin-binding protein
LBMMPJFA_00802 8.1e-46 ftsL D cell division protein FtsL
LBMMPJFA_00803 3.9e-173 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
LBMMPJFA_00804 3e-128
LBMMPJFA_00805 9.7e-32 yhaI J Protein of unknown function (DUF805)
LBMMPJFA_00806 1.3e-08 D nuclear chromosome segregation
LBMMPJFA_00807 2e-225 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LBMMPJFA_00808 5.7e-141 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LBMMPJFA_00809 2.2e-285 XK27_00765
LBMMPJFA_00810 8.1e-134 ecsA_2 V abc transporter atp-binding protein
LBMMPJFA_00811 5.2e-125 S Protein of unknown function (DUF554)
LBMMPJFA_00812 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
LBMMPJFA_00813 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
LBMMPJFA_00814 9.8e-57 liaI S membrane
LBMMPJFA_00815 7e-10 XK27_02470 K LytTr DNA-binding domain protein
LBMMPJFA_00816 1.8e-65 KT response to antibiotic
LBMMPJFA_00817 5.2e-81 yebC M Membrane
LBMMPJFA_00818 2.9e-18 yebC M Membrane
LBMMPJFA_00819 4.3e-261 XK27_03190 5.2.1.8 S hydrolases of the HAD superfamily
LBMMPJFA_00820 1.8e-181 ansA 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
LBMMPJFA_00821 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LBMMPJFA_00822 1.9e-182 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LBMMPJFA_00823 4.1e-62 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
LBMMPJFA_00824 1.1e-197 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LBMMPJFA_00825 3.8e-198 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LBMMPJFA_00826 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
LBMMPJFA_00828 3e-189 manA 5.3.1.8 G mannose-6-phosphate isomerase
LBMMPJFA_00829 4.1e-172 scrK 2.7.1.2, 2.7.1.4 GK Fructokinase
LBMMPJFA_00830 0.0 scrA 2.7.1.211 G pts system
LBMMPJFA_00831 4.1e-291 scrB 3.2.1.26 GH32 G invertase
LBMMPJFA_00832 4.9e-179 scrR K Transcriptional
LBMMPJFA_00833 2.1e-73 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LBMMPJFA_00834 3.4e-62 yqhY S protein conserved in bacteria
LBMMPJFA_00835 1.2e-97 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LBMMPJFA_00836 3.7e-84 comEB 3.5.4.12 F ComE operon protein 2
LBMMPJFA_00837 5e-193 pepP 3.4.11.9, 3.4.13.9 E Belongs to the peptidase M24B family
LBMMPJFA_00839 8e-44 V 'abc transporter, ATP-binding protein
LBMMPJFA_00840 1e-58 V 'abc transporter, ATP-binding protein
LBMMPJFA_00843 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LBMMPJFA_00844 2e-169 corA P COG0598 Mg2 and Co2 transporters
LBMMPJFA_00845 3.1e-124 XK27_01040 S Pfam PF06570
LBMMPJFA_00847 9.7e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LBMMPJFA_00848 2.7e-91 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
LBMMPJFA_00849 3.9e-47 rpsF J Binds together with S18 to 16S ribosomal RNA
LBMMPJFA_00850 2.8e-31 XK27_05745
LBMMPJFA_00851 2.5e-230 mutY L A G-specific adenine glycosylase
LBMMPJFA_00856 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LBMMPJFA_00857 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
LBMMPJFA_00858 1e-93 cvpA S toxin biosynthetic process
LBMMPJFA_00859 2.3e-13 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
LBMMPJFA_00860 4.7e-160 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LBMMPJFA_00861 1.3e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
LBMMPJFA_00862 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
LBMMPJFA_00863 2e-47 azlD E branched-chain amino acid
LBMMPJFA_00864 1.8e-114 azlC E AzlC protein
LBMMPJFA_00865 1.9e-186 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LBMMPJFA_00866 4.8e-73 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
LBMMPJFA_00867 5.6e-121 yeaZ 2.3.1.234 O COG1214, inactive homolog of metal-dependent proteases
LBMMPJFA_00868 2.5e-33 ykzG S Belongs to the UPF0356 family
LBMMPJFA_00869 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LBMMPJFA_00870 2.7e-40 pscB M CHAP domain protein
LBMMPJFA_00871 1.5e-263 glnA 6.3.1.2 E glutamine synthetase
LBMMPJFA_00872 8.5e-63 glnR K Transcriptional regulator
LBMMPJFA_00873 1.3e-87 S Fusaric acid resistance protein-like
LBMMPJFA_00874 1.1e-12
LBMMPJFA_00875 8.9e-30
LBMMPJFA_00876 2e-222 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
LBMMPJFA_00877 3.2e-42 L Transposase
LBMMPJFA_00878 1.9e-46 L transposase activity
LBMMPJFA_00879 7.4e-23 L Transposase
LBMMPJFA_00880 1.8e-56 L transposition
LBMMPJFA_00881 9.1e-83 L Integrase core domain protein
LBMMPJFA_00882 1e-102 L Transposase
LBMMPJFA_00883 2.6e-112 L Transposase
LBMMPJFA_00884 1.4e-189 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
LBMMPJFA_00885 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LBMMPJFA_00886 6.7e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
LBMMPJFA_00887 2.3e-69 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LBMMPJFA_00888 1.1e-142 purR 2.4.2.7 F operon repressor
LBMMPJFA_00889 3.6e-179 cbf S 3'-5' exoribonuclease yhaM
LBMMPJFA_00890 6.9e-173 rmuC S RmuC domain protein
LBMMPJFA_00891 3.1e-118 thiN 2.7.6.2 H thiamine pyrophosphokinase
LBMMPJFA_00892 8.6e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
LBMMPJFA_00893 6.4e-162 rsgA 3.1.3.100 G One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
LBMMPJFA_00895 8.9e-156 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
LBMMPJFA_00896 1.1e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LBMMPJFA_00897 1.6e-143 tatD L Hydrolase, tatd
LBMMPJFA_00898 7.2e-74 yccU S CoA-binding protein
LBMMPJFA_00899 4.8e-51 trxA O Belongs to the thioredoxin family
LBMMPJFA_00900 1.9e-141 S Macro domain protein
LBMMPJFA_00901 2e-09 L thioesterase
LBMMPJFA_00902 2.2e-54 bta 1.8.1.8 CO cell redox homeostasis
LBMMPJFA_00906 1.7e-226 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
LBMMPJFA_00907 5e-84 L Transposase
LBMMPJFA_00908 1e-13 rpmH J Ribosomal protein L34
LBMMPJFA_00909 2e-186 jag S RNA-binding protein
LBMMPJFA_00910 7.5e-141 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LBMMPJFA_00911 5.9e-55 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
LBMMPJFA_00912 4.1e-264 argH 4.3.2.1 E Argininosuccinate lyase
LBMMPJFA_00913 2e-230 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
LBMMPJFA_00914 2.1e-282 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LBMMPJFA_00915 6.7e-81 amiA E transmembrane transport
LBMMPJFA_00916 4.2e-74 amiA E transmembrane transport
LBMMPJFA_00917 4.8e-120 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
LBMMPJFA_00918 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LBMMPJFA_00919 3.5e-50 S Protein of unknown function (DUF3397)
LBMMPJFA_00920 2e-88 cah 4.2.1.1 P Reversible hydration of carbon dioxide
LBMMPJFA_00921 7.3e-59 WQ51_05710 S Mitochondrial biogenesis AIM24
LBMMPJFA_00922 6.2e-12 WQ51_05710 S Mitochondrial biogenesis AIM24
LBMMPJFA_00923 1.4e-226 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LBMMPJFA_00924 1.1e-80 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
LBMMPJFA_00925 1.8e-19 XK27_09620 S FMN reductase (NADPH) activity
LBMMPJFA_00926 4.3e-77 XK27_09620 S reductase
LBMMPJFA_00927 2.1e-32 XK27_09615 S FMN reductase (NADPH) activity
LBMMPJFA_00928 1.2e-131 XK27_09615 S PAS domain
LBMMPJFA_00929 1.9e-07 fnt P Formate nitrite transporter
LBMMPJFA_00930 6.4e-54 fnt P Formate nitrite transporter
LBMMPJFA_00931 7.2e-64 XK27_08585 S Psort location CytoplasmicMembrane, score
LBMMPJFA_00932 2.8e-185 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
LBMMPJFA_00933 1.8e-170 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
LBMMPJFA_00934 1.2e-165 L integrase core domain
LBMMPJFA_00935 1.1e-121 L Transposase
LBMMPJFA_00936 2.8e-117 gluP 3.4.21.105 O membrane protein (homolog of Drosophila rhomboid)
LBMMPJFA_00937 3.5e-94 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LBMMPJFA_00938 3e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
LBMMPJFA_00939 8.1e-59 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
LBMMPJFA_00940 1.6e-21 S glycolate biosynthetic process
LBMMPJFA_00941 1.5e-64 S phosphatase activity
LBMMPJFA_00942 2e-157 rrmA 2.1.1.187 Q methyltransferase
LBMMPJFA_00945 2.7e-91 tadA 3.5.4.1, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
LBMMPJFA_00946 1.9e-65 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
LBMMPJFA_00947 2.4e-36 yeeD O sulfur carrier activity
LBMMPJFA_00948 1.8e-187 yeeE S Sulphur transport
LBMMPJFA_00949 7.9e-114 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LBMMPJFA_00950 4.2e-55 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
LBMMPJFA_00951 4.1e-09 S Domain of unknown function (DUF4651)
LBMMPJFA_00952 2e-205 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
LBMMPJFA_00953 3.9e-131 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LBMMPJFA_00954 1.8e-111 S CAAX amino terminal protease family protein
LBMMPJFA_00956 5e-67 V CAAX protease self-immunity
LBMMPJFA_00957 1.4e-33 V CAAX protease self-immunity
LBMMPJFA_00958 8.8e-27 lanR K sequence-specific DNA binding
LBMMPJFA_00959 2.9e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LBMMPJFA_00960 7.7e-177 ytxK 2.1.1.72 L DNA methylase
LBMMPJFA_00961 6.8e-13 comGF U Putative Competence protein ComGF
LBMMPJFA_00962 4e-72 comGF U Competence protein ComGF
LBMMPJFA_00963 1.4e-15 NU Type II secretory pathway pseudopilin
LBMMPJFA_00964 1.8e-57 cglD NU Competence protein
LBMMPJFA_00965 8.5e-43 comGC U Required for transformation and DNA binding
LBMMPJFA_00966 9.2e-153 cglB NU type II secretion system
LBMMPJFA_00967 1.9e-175 comGA NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LBMMPJFA_00968 2.9e-68 S cog cog4699
LBMMPJFA_00969 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LBMMPJFA_00970 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LBMMPJFA_00971 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
LBMMPJFA_00972 1.2e-238 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LBMMPJFA_00973 1.6e-196 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LBMMPJFA_00974 7.7e-77 ilvN 2.2.1.6 E Acetolactate synthase
LBMMPJFA_00975 0.0 ilvB 2.2.1.6 EH Acetolactate synthase
LBMMPJFA_00976 8.8e-281 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
LBMMPJFA_00977 8.4e-09 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
LBMMPJFA_00978 1.7e-304 yloV S kinase related to dihydroxyacetone kinase
LBMMPJFA_00979 1.8e-57 asp S cog cog1302
LBMMPJFA_00980 3.2e-226 norN V Mate efflux family protein
LBMMPJFA_00981 1.9e-278 thrC 4.2.3.1 E Threonine synthase
LBMMPJFA_00982 1.9e-65 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
LBMMPJFA_00983 1.2e-35 adhE 1.1.1.1, 1.2.1.10 C hydroxyacid-oxoacid transhydrogenase activity
LBMMPJFA_00984 3.5e-76 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
LBMMPJFA_00985 1.3e-135 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
LBMMPJFA_00986 1.4e-63 adhE 1.1.1.1, 1.2.1.10 C Dehydrogenase
LBMMPJFA_00987 0.0 pepO 3.4.24.71 O Peptidase family M13
LBMMPJFA_00988 2.8e-38 treC 3.2.1.93 GH13 G COG0366 Glycosidases
LBMMPJFA_00989 1.2e-69 treC 3.2.1.93 GH13 G COG0366 Glycosidases
LBMMPJFA_00990 1.3e-65 treC 3.2.1.93 GH13 G COG0366 Glycosidases
LBMMPJFA_00991 1.4e-54 treB 2.7.1.201 G PTS System
LBMMPJFA_00992 5.8e-21 treR K DNA-binding transcription factor activity
LBMMPJFA_00993 1.2e-85 treR K trehalose operon
LBMMPJFA_00994 3.3e-95 ywlG S Belongs to the UPF0340 family
LBMMPJFA_00997 2e-35 L PFAM Integrase, catalytic core
LBMMPJFA_00998 2e-94 L PFAM Integrase, catalytic core
LBMMPJFA_00999 3.3e-46 K Putative DNA-binding domain
LBMMPJFA_01000 2.5e-13 2.3.1.82 M Acetyltransferase GNAT Family
LBMMPJFA_01001 1.2e-126 gltT C Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
LBMMPJFA_01002 6.4e-136 HJ the current gene model (or a revised gene model) may contain a frame shift
LBMMPJFA_01007 1e-39
LBMMPJFA_01008 6.5e-31
LBMMPJFA_01009 5e-31 S Hypothetical protein (DUF2513)
LBMMPJFA_01010 7.7e-13
LBMMPJFA_01012 3.7e-216 S MvaI/BcnI restriction endonuclease family
LBMMPJFA_01014 2.2e-282 dcm 2.1.1.37 H C-5 cytosine-specific DNA methylase
LBMMPJFA_01015 9e-164 fba 4.1.2.13, 4.1.2.29 G aldolase
LBMMPJFA_01017 6.7e-110 6.3.2.2 H ergothioneine biosynthetic process
LBMMPJFA_01018 1.5e-65 6.3.2.2 H gamma-glutamylcysteine synthetase
LBMMPJFA_01019 3.2e-12 6.3.2.2 H gamma-glutamylcysteine synthetase
LBMMPJFA_01020 3.3e-09 L PFAM Integrase, catalytic core
LBMMPJFA_01021 1.8e-111 L PFAM Integrase, catalytic core
LBMMPJFA_01022 3.3e-62 rplQ J ribosomal protein l17
LBMMPJFA_01023 4.8e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LBMMPJFA_01024 9.6e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LBMMPJFA_01025 4e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LBMMPJFA_01026 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
LBMMPJFA_01027 2.7e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LBMMPJFA_01028 9.2e-121 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
LBMMPJFA_01029 2.1e-230 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
LBMMPJFA_01030 4.4e-58 rplO J binds to the 23S rRNA
LBMMPJFA_01031 2.5e-23 rpmD J ribosomal protein l30
LBMMPJFA_01032 1.7e-79 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LBMMPJFA_01033 1.9e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LBMMPJFA_01034 2.3e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LBMMPJFA_01035 1.2e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LBMMPJFA_01036 1.5e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LBMMPJFA_01037 1.6e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LBMMPJFA_01038 1.4e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LBMMPJFA_01039 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LBMMPJFA_01040 6e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LBMMPJFA_01041 2.7e-26 rpmC J Belongs to the universal ribosomal protein uL29 family
LBMMPJFA_01042 7.2e-71 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LBMMPJFA_01043 2.1e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LBMMPJFA_01044 7.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LBMMPJFA_01045 4.9e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LBMMPJFA_01046 8.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LBMMPJFA_01047 2.4e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
LBMMPJFA_01048 5.7e-104 rplD J Forms part of the polypeptide exit tunnel
LBMMPJFA_01049 1.1e-110 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LBMMPJFA_01050 1.3e-48 rpsJ J Involved in the binding of tRNA to the ribosomes
LBMMPJFA_01051 7.8e-188 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
LBMMPJFA_01052 3.2e-292 XK27_09800 I Acyltransferase
LBMMPJFA_01053 1.7e-35 XK27_09805 S MORN repeat protein
LBMMPJFA_01054 1e-80 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LBMMPJFA_01055 4.1e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LBMMPJFA_01056 1.5e-89 adk 2.7.4.3 F topology modulation protein
LBMMPJFA_01057 8.6e-127 Z012_04635 K sequence-specific DNA binding
LBMMPJFA_01059 6.3e-16 C Radical SAM
LBMMPJFA_01060 3.4e-191 C Radical SAM
LBMMPJFA_01061 3.9e-287 V ABC transporter transmembrane region
LBMMPJFA_01062 2.5e-89 K sequence-specific DNA binding
LBMMPJFA_01063 1.3e-36 L Replication initiation factor
LBMMPJFA_01064 1.4e-107 L Replication initiation factor
LBMMPJFA_01065 1.9e-18 S Domain of unknown function (DUF3173)
LBMMPJFA_01066 3.5e-216 int L Belongs to the 'phage' integrase family
LBMMPJFA_01068 5.2e-237 rarA L ATPase related to the helicase subunit of the Holliday junction resolvase
LBMMPJFA_01069 8.4e-27 rpmB J Belongs to the bacterial ribosomal protein bL28 family
LBMMPJFA_01070 2.8e-44 yrzL S Belongs to the UPF0297 family
LBMMPJFA_01071 1.2e-70 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LBMMPJFA_01072 4.2e-44 yrzB S Belongs to the UPF0473 family
LBMMPJFA_01073 6.6e-301 ccs S the current gene model (or a revised gene model) may contain a frame shift
LBMMPJFA_01074 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
LBMMPJFA_01075 7.5e-14
LBMMPJFA_01076 2.6e-91 XK27_10930 K acetyltransferase
LBMMPJFA_01077 3.7e-116 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LBMMPJFA_01078 2.3e-41 yaaA S Belongs to the UPF0246 family
LBMMPJFA_01079 1.2e-50 yaaA S Belongs to the UPF0246 family
LBMMPJFA_01080 9.9e-169 XK27_01785 S cog cog1284
LBMMPJFA_01081 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
LBMMPJFA_01083 1.6e-241 hisS 6.1.1.21 J histidyl-tRNA synthetase
LBMMPJFA_01084 5.7e-52 metE 2.1.1.14 E Methionine synthase
LBMMPJFA_01085 7.6e-64 metE 2.1.1.14 E Methionine synthase
LBMMPJFA_01086 9.2e-36 metE 2.1.1.14 E Methionine synthase
LBMMPJFA_01087 2e-25 rpmF J Belongs to the bacterial ribosomal protein bL32 family
LBMMPJFA_01088 6.7e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
LBMMPJFA_01090 3.1e-20 yegS 2.7.1.107 I lipid kinase activity
LBMMPJFA_01091 2.7e-95 S Hydrophobic domain protein
LBMMPJFA_01093 3.7e-27 S Membrane
LBMMPJFA_01094 3.1e-101
LBMMPJFA_01095 1.8e-23 S Small integral membrane protein
LBMMPJFA_01096 1.1e-71 M Protein conserved in bacteria
LBMMPJFA_01097 4.9e-12 K CsbD-like
LBMMPJFA_01098 3.5e-97 nudL L hydrolase
LBMMPJFA_01099 3.4e-13 nudL L hydrolase
LBMMPJFA_01100 4e-19 K negative regulation of transcription, DNA-templated
LBMMPJFA_01101 1.7e-23 K negative regulation of transcription, DNA-templated
LBMMPJFA_01103 1.8e-19 XK27_06920 S Protein of unknown function (DUF1700)
LBMMPJFA_01104 1.8e-88 S Putative adhesin
LBMMPJFA_01105 3.9e-161 XK27_06930 V domain protein
LBMMPJFA_01106 6.4e-96 XK27_06935 K transcriptional regulator
LBMMPJFA_01107 4.8e-55 ypaA M Membrane
LBMMPJFA_01108 2.7e-08
LBMMPJFA_01109 9.8e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LBMMPJFA_01110 8.2e-48 veg S Biofilm formation stimulator VEG
LBMMPJFA_01111 1.5e-245 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
LBMMPJFA_01112 3.9e-70 rplI J binds to the 23S rRNA
LBMMPJFA_01113 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
LBMMPJFA_01114 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
LBMMPJFA_01115 1.5e-77 F NUDIX domain
LBMMPJFA_01116 8.6e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
LBMMPJFA_01117 0.0 S Bacterial membrane protein, YfhO
LBMMPJFA_01118 1.5e-88 isaA GH23 M Immunodominant staphylococcal antigen A
LBMMPJFA_01119 5.3e-85 lytE M LysM domain protein
LBMMPJFA_01120 2e-138 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LBMMPJFA_01121 5.2e-153 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LBMMPJFA_01122 4.7e-137 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LBMMPJFA_01123 3.1e-90 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LBMMPJFA_01124 6.3e-138 ymfM S sequence-specific DNA binding
LBMMPJFA_01125 3.1e-242 ymfH S Peptidase M16
LBMMPJFA_01126 4.8e-235 ymfF S Peptidase M16
LBMMPJFA_01127 1.6e-45 yaaA S S4 domain protein YaaA
LBMMPJFA_01128 5.9e-205 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LBMMPJFA_01129 4.3e-275 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
LBMMPJFA_01130 6.3e-193 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
LBMMPJFA_01131 4.2e-153 yvjA S membrane
LBMMPJFA_01132 6.7e-306 ybiT S abc transporter atp-binding protein
LBMMPJFA_01133 0.0 XK27_10405 S Bacterial membrane protein YfhO
LBMMPJFA_01137 6.2e-120 yoaK S Psort location CytoplasmicMembrane, score
LBMMPJFA_01138 1.1e-86 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LBMMPJFA_01139 2.6e-193 htrA 3.4.21.107 O Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain'
LBMMPJFA_01140 8.5e-134 parB K Belongs to the ParB family
LBMMPJFA_01141 1.3e-257 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LBMMPJFA_01142 6.3e-202 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
LBMMPJFA_01143 1.1e-29 yyzM S Protein conserved in bacteria
LBMMPJFA_01144 1.1e-203 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
LBMMPJFA_01145 1.4e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
LBMMPJFA_01146 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LBMMPJFA_01147 1.7e-39 yabO J Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
LBMMPJFA_01148 2.7e-61 divIC D Septum formation initiator
LBMMPJFA_01150 8.7e-240 XK27_09285 3.5.2.6 V Beta-lactamase enzyme family
LBMMPJFA_01151 5e-240 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
LBMMPJFA_01152 3.4e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
LBMMPJFA_01153 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LBMMPJFA_01154 1.3e-137 L Transposase
LBMMPJFA_01155 1.1e-92 L Transposase
LBMMPJFA_01156 1.6e-55 L transposition
LBMMPJFA_01157 1.9e-86 L Integrase core domain protein
LBMMPJFA_01170 5.3e-11
LBMMPJFA_01176 5.5e-139 mreC M Involved in formation and maintenance of cell shape
LBMMPJFA_01177 6.3e-88 mreD M Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
LBMMPJFA_01178 1.7e-90 usp 3.5.1.28 CBM50 S CHAP domain
LBMMPJFA_01179 1.2e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LBMMPJFA_01180 2.9e-218 araT 2.6.1.1 E Aminotransferase
LBMMPJFA_01181 2.6e-143 recO L Involved in DNA repair and RecF pathway recombination
LBMMPJFA_01182 1.3e-179 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
LBMMPJFA_01183 4.2e-34 acpP1 IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
LBMMPJFA_01184 2e-129 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
LBMMPJFA_01185 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LBMMPJFA_01186 1.3e-276 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LBMMPJFA_01187 1.8e-184 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
LBMMPJFA_01188 1.4e-101 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LBMMPJFA_01189 2.3e-295 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
LBMMPJFA_01190 6.1e-79 L transposase activity
LBMMPJFA_01191 1.3e-49 L transposition
LBMMPJFA_01192 6.3e-34 L Integrase core domain protein
LBMMPJFA_01193 2.3e-161 S CHAP domain
LBMMPJFA_01194 3.4e-241 purD 6.3.4.13 F Belongs to the GARS family
LBMMPJFA_01195 4.9e-76 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LBMMPJFA_01196 2.2e-204 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LBMMPJFA_01197 9.2e-141 1.1.1.169 H Ketopantoate reductase
LBMMPJFA_01198 8.7e-248 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LBMMPJFA_01199 0.0 argS 6.1.1.19 J Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
LBMMPJFA_01200 1.2e-09 L Transposase
LBMMPJFA_01201 7.8e-211 ugd 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
LBMMPJFA_01202 8.3e-221 nodC 2.4.1.212 GT2 M Chitin synthase
LBMMPJFA_01203 3.1e-89 FNV0100 F Belongs to the Nudix hydrolase family
LBMMPJFA_01204 3.5e-28 3.4.13.21 I Protein conserved in bacteria
LBMMPJFA_01207 1.3e-57 T Toxic component of a toxin-antitoxin (TA) module
LBMMPJFA_01209 8.2e-70 argR K Regulates arginine biosynthesis genes
LBMMPJFA_01210 1e-57 ymcA 3.6.3.21 S Belongs to the UPF0342 family
LBMMPJFA_01211 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LBMMPJFA_01212 7e-34 S Protein of unknown function (DUF3021)
LBMMPJFA_01213 1.2e-61 KT phosphorelay signal transduction system
LBMMPJFA_01215 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
LBMMPJFA_01217 7.8e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
LBMMPJFA_01218 6.4e-107 tag 3.2.2.20 L 3-methyladenine DNA glycosylase
LBMMPJFA_01219 1e-232 cinA 3.5.1.42 S Belongs to the CinA family
LBMMPJFA_01220 2.8e-197 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LBMMPJFA_01221 2.3e-66 spxA_2 1.20.4.1 P Belongs to the ArsC family
LBMMPJFA_01227 2.6e-10
LBMMPJFA_01230 1.9e-07
LBMMPJFA_01235 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LBMMPJFA_01236 8.6e-237 pepS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
LBMMPJFA_01237 5.5e-36 XK27_02060 S Transglycosylase associated protein
LBMMPJFA_01238 1.7e-54 badR K DNA-binding transcription factor activity
LBMMPJFA_01239 1e-96 S reductase
LBMMPJFA_01240 2.3e-31 L Integrase core domain protein
LBMMPJFA_01241 6.2e-36 L transposition
LBMMPJFA_01242 1.9e-22 yocD 3.4.17.13 V carboxypeptidase activity
LBMMPJFA_01243 3.8e-87 yocD 3.4.17.13 V proteins, homologs of microcin C7 resistance protein MccF
LBMMPJFA_01246 1.3e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
LBMMPJFA_01247 1.7e-182 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LBMMPJFA_01248 1.1e-83 S Putative small multi-drug export protein
LBMMPJFA_01249 6.2e-76 ctsR K Belongs to the CtsR family
LBMMPJFA_01250 0.0 clpC O Belongs to the ClpA ClpB family
LBMMPJFA_01251 3.2e-151 dacA 3.4.16.4 M Belongs to the peptidase S11 family
LBMMPJFA_01252 1.8e-32 dacA 3.4.16.4 M Belongs to the peptidase S11 family
LBMMPJFA_01253 1.4e-231 dacA 3.4.16.4 M Belongs to the peptidase S11 family
LBMMPJFA_01254 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
LBMMPJFA_01255 6.9e-144 S SseB protein N-terminal domain
LBMMPJFA_01256 1.1e-112 cysE 2.3.1.30 E serine acetyltransferase
LBMMPJFA_01257 1.7e-259 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
LBMMPJFA_01258 4.2e-68 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
LBMMPJFA_01261 5.7e-135 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LBMMPJFA_01262 1e-84 yacP S RNA-binding protein containing a PIN domain
LBMMPJFA_01263 3.4e-155 degV S DegV family
LBMMPJFA_01265 1.8e-31 K helix-turn-helix
LBMMPJFA_01266 6.1e-182 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LBMMPJFA_01267 2e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LBMMPJFA_01268 9.5e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
LBMMPJFA_01269 1.5e-35 K sequence-specific DNA binding
LBMMPJFA_01271 0.0 S Lantibiotic dehydratase, C terminus
LBMMPJFA_01272 2.4e-231 spaC2 V Lanthionine synthetase C family protein
LBMMPJFA_01273 1.6e-182 EGP Major facilitator Superfamily
LBMMPJFA_01274 5.9e-24 3.6.4.12
LBMMPJFA_01275 5.9e-91 3.6.4.12 K Divergent AAA domain protein
LBMMPJFA_01276 7.4e-225 int L Belongs to the 'phage' integrase family
LBMMPJFA_01277 1.8e-38 S Helix-turn-helix domain
LBMMPJFA_01278 4.9e-173
LBMMPJFA_01280 3.4e-75 isp2 S pathogenesis
LBMMPJFA_01281 7e-62 tnp L Transposase
LBMMPJFA_01282 3.3e-225 capA M Bacterial capsule synthesis protein
LBMMPJFA_01283 3.6e-39 gcvR T UPF0237 protein
LBMMPJFA_01284 1.9e-242 XK27_08635 S UPF0210 protein
LBMMPJFA_01285 2.2e-38 ais G alpha-ribazole phosphatase activity
LBMMPJFA_01286 1.6e-143 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
LBMMPJFA_01287 1.3e-102 acmA 3.2.1.17 NU amidase activity
LBMMPJFA_01288 5.3e-198 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
LBMMPJFA_01289 1.3e-71 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LBMMPJFA_01290 9.8e-298 dnaK O Heat shock 70 kDa protein
LBMMPJFA_01291 4.2e-190 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
LBMMPJFA_01292 2.5e-138 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
LBMMPJFA_01293 6.2e-137 thiD 2.7.1.35, 2.7.1.49, 2.7.4.7 H phosphomethylpyrimidine kinase
LBMMPJFA_01294 1.7e-60 hmpT S membrane
LBMMPJFA_01307 0.0 amiA E ABC transporter, substrate-binding protein, family 5
LBMMPJFA_01308 1.3e-168 L Transposase
LBMMPJFA_01309 9.9e-19 S Domain of unknown function (DUF4649)
LBMMPJFA_01310 1.8e-56 amd 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
LBMMPJFA_01311 1.5e-233 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
LBMMPJFA_01312 6.5e-87
LBMMPJFA_01313 1.6e-77 sigH K DNA-templated transcription, initiation
LBMMPJFA_01314 3.5e-149 ykuT M mechanosensitive ion channel
LBMMPJFA_01315 7.1e-218 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
LBMMPJFA_01316 4.8e-73 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
LBMMPJFA_01317 7.6e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
LBMMPJFA_01318 1.1e-83 XK27_03960 S Protein of unknown function (DUF3013)
LBMMPJFA_01319 3.7e-81 mutT3 3.6.1.13, 3.6.1.55 L NUDIX domain
LBMMPJFA_01320 2e-177 prmA J Ribosomal protein L11 methyltransferase
LBMMPJFA_01321 4.4e-135 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
LBMMPJFA_01322 1.4e-42 F nucleotide catabolic process
LBMMPJFA_01323 5.4e-139 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
LBMMPJFA_01324 7.7e-140 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
LBMMPJFA_01325 2.3e-51 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
LBMMPJFA_01326 1.8e-83 nrdI F Belongs to the NrdI family
LBMMPJFA_01327 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LBMMPJFA_01328 2.3e-75 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
LBMMPJFA_01329 1.4e-09 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
LBMMPJFA_01330 2e-27 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
LBMMPJFA_01331 2.1e-58 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
LBMMPJFA_01332 3.9e-46 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
LBMMPJFA_01333 1.7e-237 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LBMMPJFA_01334 3.3e-112 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LBMMPJFA_01335 5.3e-113 fnr5 K Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
LBMMPJFA_01336 6.5e-202 yhjX P Major Facilitator
LBMMPJFA_01337 9.2e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LBMMPJFA_01338 5e-94 V VanZ like family
LBMMPJFA_01339 1e-123 glnQ E abc transporter atp-binding protein
LBMMPJFA_01340 5.8e-275 glnP P ABC transporter
LBMMPJFA_01341 9.1e-153 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
LBMMPJFA_01342 1.3e-134 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
LBMMPJFA_01343 1.9e-185 tagO 2.7.8.33, 2.7.8.35 M transferase
LBMMPJFA_01344 9.5e-144 sufC O ABC-type transport system involved in Fe-S cluster assembly, ATPase component
LBMMPJFA_01345 1.4e-234 sufD O assembly protein SufD
LBMMPJFA_01346 7.7e-238 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LBMMPJFA_01347 2.5e-74 nifU C SUF system FeS assembly protein, NifU family
LBMMPJFA_01348 2.2e-273 sufB O assembly protein SufB
LBMMPJFA_01349 7e-10 oppA E ABC transporter substrate-binding protein
LBMMPJFA_01350 2e-138 oppA E ABC transporter substrate-binding protein
LBMMPJFA_01351 4.2e-27 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
LBMMPJFA_01352 6.6e-11 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
LBMMPJFA_01353 1.7e-33 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
LBMMPJFA_01354 2.5e-09 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
LBMMPJFA_01355 1.4e-38 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
LBMMPJFA_01356 3e-27 oppD P Belongs to the ABC transporter superfamily
LBMMPJFA_01357 2.5e-32 oppD P Belongs to the ABC transporter superfamily
LBMMPJFA_01358 1.2e-62 oppD P Belongs to the ABC transporter superfamily
LBMMPJFA_01359 3.1e-43 oppD P Belongs to the ABC transporter superfamily
LBMMPJFA_01360 7.5e-62 oppF P Belongs to the ABC transporter superfamily
LBMMPJFA_01361 4.4e-62 oppF P Belongs to the ABC transporter superfamily
LBMMPJFA_01362 6.4e-23
LBMMPJFA_01363 2.1e-157 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
LBMMPJFA_01364 7.4e-183 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LBMMPJFA_01365 1.9e-223 EGP Major facilitator Superfamily
LBMMPJFA_01366 3.1e-72 adcR K transcriptional
LBMMPJFA_01367 2.2e-136 adcC P ABC transporter, ATP-binding protein
LBMMPJFA_01368 1.6e-127 adcB P ABC transporter (Permease
LBMMPJFA_01369 1.4e-162 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
LBMMPJFA_01370 5.6e-65 ptsG 2.7.1.199, 2.7.1.208 G pts system
LBMMPJFA_01371 2.1e-150 ptsG 2.7.1.199, 2.7.1.208, 2.7.1.211 G pts system
LBMMPJFA_01372 1.4e-105 ptsG 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
LBMMPJFA_01373 6.8e-158 rgfB 3.1.3.90 L Endonuclease/Exonuclease/phosphatase family
LBMMPJFA_01374 2.8e-257 pgi 5.3.1.9 G Belongs to the GPI family
LBMMPJFA_01375 1.9e-127 yeeN K transcriptional regulatory protein
LBMMPJFA_01376 9.8e-50 yajC U protein transport
LBMMPJFA_01377 1.1e-141 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LBMMPJFA_01378 2.2e-145 cdsA 2.7.7.41 S Belongs to the CDS family
LBMMPJFA_01379 1.4e-231 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
LBMMPJFA_01380 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
LBMMPJFA_01381 0.0 WQ51_06230 S ABC transporter substrate binding protein
LBMMPJFA_01382 5.2e-142 cmpC S abc transporter atp-binding protein
LBMMPJFA_01383 1.3e-42 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
LBMMPJFA_01384 4.1e-287 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
LBMMPJFA_01385 4.4e-37 L Transposase
LBMMPJFA_01386 6.4e-18 L transposase activity
LBMMPJFA_01387 1.5e-30 L transposition
LBMMPJFA_01390 4.7e-43
LBMMPJFA_01391 6.8e-56 S TM2 domain
LBMMPJFA_01392 1.2e-165 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LBMMPJFA_01393 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
LBMMPJFA_01394 3.3e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
LBMMPJFA_01395 5.7e-25 secE U Belongs to the SecE SEC61-gamma family
LBMMPJFA_01396 8.4e-96 nusG K Participates in transcription elongation, termination and antitermination
LBMMPJFA_01397 4.6e-85 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I phosphatidate phosphatase activity
LBMMPJFA_01398 6e-55 cof Q phosphatase activity
LBMMPJFA_01399 6.2e-35 cof Q phosphatase activity
LBMMPJFA_01400 1.6e-137 glcR K transcriptional regulator (DeoR family)
LBMMPJFA_01401 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
LBMMPJFA_01403 3.8e-40 K transcriptional
LBMMPJFA_01405 2.6e-76 S thiolester hydrolase activity
LBMMPJFA_01406 1e-139 S COG1073 Hydrolases of the alpha beta superfamily
LBMMPJFA_01407 5.7e-280 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LBMMPJFA_01408 2.1e-151 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
LBMMPJFA_01409 1.9e-77 yhaI L Membrane
LBMMPJFA_01410 5.1e-259 pepC 3.4.22.40 E aminopeptidase
LBMMPJFA_01411 1.6e-249 L Transposase
LBMMPJFA_01412 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
LBMMPJFA_01413 2.5e-109 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
LBMMPJFA_01414 3.1e-95 ypsA S Belongs to the UPF0398 family
LBMMPJFA_01415 2.5e-50 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
LBMMPJFA_01416 1.5e-222 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
LBMMPJFA_01417 2.5e-296 mapZ D Early cell division protein that marks the future cell division site and supports proper FtsZ ring positioning
LBMMPJFA_01418 0.0 snf 2.7.11.1 L Superfamily II DNA RNA helicases, SNF2 family'
LBMMPJFA_01419 2.5e-23
LBMMPJFA_01420 2.6e-255 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
LBMMPJFA_01421 7.3e-80 XK27_09675 K -acetyltransferase
LBMMPJFA_01422 0.0 mltG ADL Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LBMMPJFA_01423 1.6e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LBMMPJFA_01424 5.2e-59 L Integrase core domain protein
LBMMPJFA_01425 2.9e-165 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LBMMPJFA_01426 7e-46 acyP 3.6.1.7 C Belongs to the acylphosphatase family
LBMMPJFA_01427 6.4e-131 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LBMMPJFA_01428 6.1e-93 XK27_09705 6.1.1.14 S HD superfamily hydrolase
LBMMPJFA_01429 8.8e-98 ybhL S Belongs to the BI1 family
LBMMPJFA_01432 9.6e-244 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
LBMMPJFA_01433 3.7e-91 K transcriptional regulator
LBMMPJFA_01434 7.6e-36 yneF S UPF0154 protein
LBMMPJFA_01435 3.8e-148 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
LBMMPJFA_01436 7.1e-186 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LBMMPJFA_01437 3.5e-99 XK27_09740 S Phosphoesterase
LBMMPJFA_01438 7.8e-85 ykuL S CBS domain
LBMMPJFA_01439 4.5e-135 xerD L tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site
LBMMPJFA_01440 3.8e-120 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
LBMMPJFA_01441 3e-99 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LBMMPJFA_01442 6.1e-140 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
LBMMPJFA_01443 1.2e-39 yidD S Could be involved in insertion of integral membrane proteins into the membrane
LBMMPJFA_01444 1.2e-258 trkH P Cation transport protein
LBMMPJFA_01445 1.5e-247 trkA P Potassium transporter peripheral membrane component
LBMMPJFA_01446 7.9e-96 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
LBMMPJFA_01447 3.2e-90 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
LBMMPJFA_01448 4.8e-114 bcrC 3.6.1.27 I Membrane-associated phospholipid phosphatase
LBMMPJFA_01449 5.6e-161 K sequence-specific DNA binding
LBMMPJFA_01450 1.2e-32 V protein secretion by the type I secretion system
LBMMPJFA_01451 7.4e-36 V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
LBMMPJFA_01452 4.3e-57 V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
LBMMPJFA_01453 1.6e-25 V protein secretion by the type I secretion system
LBMMPJFA_01454 1.8e-27 comA V protein secretion by the type I secretion system
LBMMPJFA_01455 3.4e-68 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
LBMMPJFA_01456 3.7e-51 yhaI L Membrane
LBMMPJFA_01457 6.7e-36 S Domain of unknown function (DUF4173)
LBMMPJFA_01458 9.2e-132 S Domain of unknown function (DUF4173)
LBMMPJFA_01459 6.8e-95 ureI S AmiS/UreI family transporter
LBMMPJFA_01460 7.6e-46 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
LBMMPJFA_01461 7.8e-54 ureB 3.5.1.5 E Belongs to the urease beta subunit family
LBMMPJFA_01462 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
LBMMPJFA_01463 6.6e-78 ureE O enzyme active site formation
LBMMPJFA_01464 5.3e-130 ureF O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
LBMMPJFA_01465 9.5e-112 ureG KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
LBMMPJFA_01466 1.3e-159 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
LBMMPJFA_01467 2.7e-177 cbiM P PDGLE domain
LBMMPJFA_01468 1.1e-136 P cobalt transport protein
LBMMPJFA_01469 1.6e-131 cbiO P ABC transporter
LBMMPJFA_01470 5.3e-153 ET amino acid transport
LBMMPJFA_01471 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LBMMPJFA_01472 0.0 3.3.1.1, 3.6.1.55, 3.6.1.67 F NUDIX domain
LBMMPJFA_01473 3.8e-205 EGP Transmembrane secretion effector
LBMMPJFA_01474 1.8e-153 ET amino acid transport
LBMMPJFA_01475 7.1e-164 metQ M Belongs to the NlpA lipoprotein family
LBMMPJFA_01476 4.9e-87 dapE 3.5.1.18 E COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases
LBMMPJFA_01477 1.2e-61 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase activity
LBMMPJFA_01478 1.4e-62 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase activity
LBMMPJFA_01479 1.2e-189 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LBMMPJFA_01480 5.2e-98 metI P ABC transporter (Permease
LBMMPJFA_01481 3.9e-210 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
LBMMPJFA_01482 5.5e-158 salL 2.5.1.63, 2.5.1.94 S S-adenosyl-l-methionine hydroxide adenosyltransferase
LBMMPJFA_01483 3.3e-07 S UPF0397 protein
LBMMPJFA_01484 1.9e-68 S UPF0397 protein
LBMMPJFA_01485 0.0 ykoD P abc transporter atp-binding protein
LBMMPJFA_01486 1.2e-146 cbiQ P cobalt transport
LBMMPJFA_01487 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LBMMPJFA_01488 1.4e-11 ulaG S L-ascorbate 6-phosphate lactonase
LBMMPJFA_01489 1.4e-121 ktrA P COG0569 K transport systems, NAD-binding component
LBMMPJFA_01490 1.2e-244 P COG0168 Trk-type K transport systems, membrane components
LBMMPJFA_01491 1.1e-130 rsmG 2.1.1.170 J Ribosomal RNA small subunit methyltransferase G
LBMMPJFA_01492 2.4e-90 yceD K metal-binding, possibly nucleic acid-binding protein
LBMMPJFA_01493 3e-122 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LBMMPJFA_01494 2.8e-282 T PhoQ Sensor
LBMMPJFA_01495 4.7e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LBMMPJFA_01496 6.5e-218 dnaB L Replication initiation and membrane attachment
LBMMPJFA_01497 4.4e-166 dnaI L Primosomal protein DnaI
LBMMPJFA_01498 2.6e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
LBMMPJFA_01500 1.2e-34
LBMMPJFA_01501 6.7e-14 yrdC 3.5.1.19 Q isochorismatase
LBMMPJFA_01502 3e-27 L Integrase core domain protein
LBMMPJFA_01503 3.4e-50 L transposition
LBMMPJFA_01504 5.7e-23 L Transposase
LBMMPJFA_01505 7.8e-28 L transposase activity
LBMMPJFA_01506 8.6e-232 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LBMMPJFA_01507 4.2e-62 manO S protein conserved in bacteria
LBMMPJFA_01508 6.2e-168 manN G PTS system mannose fructose sorbose family IID component
LBMMPJFA_01509 2.3e-116 manM G pts system
LBMMPJFA_01510 1.1e-181 manL 2.7.1.191 G pts system
LBMMPJFA_01511 1.5e-140 XK27_00940 1.2.1.70, 3.5.1.9 S Metal-dependent hydrolase
LBMMPJFA_01512 1e-153 yitU 3.1.3.104 S hydrolases of the HAD superfamily
LBMMPJFA_01513 1.9e-248 pbuO S permease
LBMMPJFA_01514 1.4e-77 ydiB 2.7.1.221, 5.1.1.1 M ATPase or kinase
LBMMPJFA_01515 2.4e-92 XK27_05885 2.3.1.82 M Acetyltransferase GNAT Family
LBMMPJFA_01516 2.5e-220 brpA K Transcriptional
LBMMPJFA_01517 3.9e-81 rimP S Required for maturation of 30S ribosomal subunits
LBMMPJFA_01518 3.1e-212 nusA K Participates in both transcription termination and antitermination
LBMMPJFA_01519 1e-47 ylxR K Nucleic-acid-binding protein implicated in transcription termination
LBMMPJFA_01520 2e-46 ylxQ J ribosomal protein
LBMMPJFA_01521 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LBMMPJFA_01522 1.7e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LBMMPJFA_01523 2e-22 yvdD 3.2.2.10 S Belongs to the LOG family
LBMMPJFA_01524 1.5e-25 yvdD 3.2.2.10 S cytokinin biosynthetic process
LBMMPJFA_01525 3.6e-48 femA 2.3.2.10, 2.3.2.16, 2.3.2.17, 2.3.2.18 V protein involved in methicillin resistance
LBMMPJFA_01526 6.2e-85 femA 2.3.2.10, 2.3.2.16, 2.3.2.17, 2.3.2.18 V protein involved in methicillin resistance
LBMMPJFA_01527 3.2e-49 femA 2.3.2.10, 2.3.2.16, 2.3.2.17, 2.3.2.18 V protein involved in methicillin resistance
LBMMPJFA_01528 4.9e-276 murE 6.3.2.13, 6.3.2.7 M to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LBMMPJFA_01529 4.5e-283 ytgP S Membrane protein involved in the export of O-antigen and teichoic acid
LBMMPJFA_01530 3.3e-96 pacL 3.6.3.8, 3.6.3.9 P cation transport ATPase
LBMMPJFA_01531 4.7e-202 metB 2.5.1.48, 4.4.1.8 E cystathionine
LBMMPJFA_01532 1e-223 malY 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
LBMMPJFA_01534 4.4e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LBMMPJFA_01535 2.9e-105 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LBMMPJFA_01536 1.2e-74 ylbF S Belongs to the UPF0342 family
LBMMPJFA_01537 7.1e-46 ylbG S UPF0298 protein
LBMMPJFA_01538 1.3e-210 livJ E COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component
LBMMPJFA_01539 1.9e-145 livH E Belongs to the binding-protein-dependent transport system permease family
LBMMPJFA_01540 1.4e-138 livM E Belongs to the binding-protein-dependent transport system permease family
LBMMPJFA_01541 9.6e-138 livG E COG0411 ABC-type branched-chain amino acid transport systems, ATPase component
LBMMPJFA_01542 4.8e-123 livF E COG0410 ABC-type branched-chain amino acid transport systems, ATPase component
LBMMPJFA_01543 6.8e-69 acuB S IMP dehydrogenase activity
LBMMPJFA_01544 8.9e-41 acuB S IMP dehydrogenase activity
LBMMPJFA_01545 3.7e-168 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
LBMMPJFA_01546 1.1e-110 yvyE 3.4.13.9 S YigZ family
LBMMPJFA_01547 4.5e-252 comFA L Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
LBMMPJFA_01548 1.7e-122 comFC S Competence protein
LBMMPJFA_01549 2.1e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LBMMPJFA_01557 2.1e-166 ppaC 3.6.1.1 C inorganic pyrophosphatase
LBMMPJFA_01558 6.4e-108 S Domain of unknown function (DUF1803)
LBMMPJFA_01559 7.8e-102 ygaC J Belongs to the UPF0374 family
LBMMPJFA_01560 1.2e-130 recX 2.4.1.337 GT4 S Regulatory protein RecX
LBMMPJFA_01561 6.7e-259 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LBMMPJFA_01562 8e-193 asnA 6.3.1.1 E aspartate--ammonia ligase
LBMMPJFA_01563 2.6e-255 lysC 2.7.2.4 E Belongs to the aspartokinase family
LBMMPJFA_01564 1.9e-115 S Haloacid dehalogenase-like hydrolase
LBMMPJFA_01565 2.4e-139 phaB 5.3.3.14, 5.3.3.18 I Belongs to the enoyl-CoA hydratase isomerase family
LBMMPJFA_01566 4e-72 marR K Transcriptional regulator, MarR family
LBMMPJFA_01567 2.3e-173 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LBMMPJFA_01568 3.3e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
LBMMPJFA_01569 5.8e-172 fabK 1.3.1.9 S 2-Nitropropane dioxygenase
LBMMPJFA_01570 8.5e-165 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
LBMMPJFA_01571 1.6e-126 IQ reductase
LBMMPJFA_01572 2.6e-233 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
LBMMPJFA_01573 7.7e-56 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
LBMMPJFA_01574 1.5e-71 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
LBMMPJFA_01575 1.7e-257 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
LBMMPJFA_01576 1.6e-160 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
LBMMPJFA_01577 1.1e-138 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
LBMMPJFA_01578 4.7e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
LBMMPJFA_01579 1.1e-65 tnp L Transposase
LBMMPJFA_01580 2.3e-214 gadB 4.1.1.15 E Belongs to the group II decarboxylase family
LBMMPJFA_01581 9.8e-176 gadC E Psort location CytoplasmicMembrane, score 10.00
LBMMPJFA_01582 4.7e-27 L Transposase and inactivated derivatives, TnpA family
LBMMPJFA_01583 3.4e-126 tnp L Transposase
LBMMPJFA_01585 8e-277 S Protein of unknown function (DUF3114)
LBMMPJFA_01586 2.2e-38 2.3.1.128 K Acetyltransferase GNAT Family
LBMMPJFA_01587 7.7e-198 V (ABC) transporter
LBMMPJFA_01588 1.4e-74 C Arylsulfatase regulator (Fe-S oxidoreductase)
LBMMPJFA_01589 6.4e-85 C Arylsulfatase regulator (Fe-S oxidoreductase)
LBMMPJFA_01590 1.1e-113 K sequence-specific DNA binding
LBMMPJFA_01591 8.4e-155 L COG2801 Transposase and inactivated derivatives
LBMMPJFA_01592 6.6e-38 L transposase activity
LBMMPJFA_01593 1.3e-205 rny D Endoribonuclease that initiates mRNA decay
LBMMPJFA_01594 1.8e-84 L Transposase
LBMMPJFA_01595 5.5e-122 fruR K transcriptional
LBMMPJFA_01596 3.8e-165 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
LBMMPJFA_01597 0.0 fruA 2.7.1.202 G phosphotransferase system
LBMMPJFA_01598 2.7e-260 gor 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LBMMPJFA_01599 2.6e-241 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
LBMMPJFA_01601 6.1e-213 iscS2 2.8.1.7 E Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes
LBMMPJFA_01602 6.5e-229 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LBMMPJFA_01603 4.9e-295 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
LBMMPJFA_01604 7.2e-258 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
LBMMPJFA_01605 6.4e-29 2.3.1.128 K acetyltransferase
LBMMPJFA_01606 4.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
LBMMPJFA_01607 1.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
LBMMPJFA_01608 7.7e-134 ydaF_2 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LBMMPJFA_01609 2.6e-64 WQ51_03320 S cog cog4835
LBMMPJFA_01610 9.8e-91 XK27_08360 S EDD domain protein, DegV family
LBMMPJFA_01611 3e-139 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
LBMMPJFA_01612 9.6e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
LBMMPJFA_01613 0.0 yfmR S abc transporter atp-binding protein
LBMMPJFA_01614 1.6e-24 U response to pH
LBMMPJFA_01615 1.1e-141 3.6.1.13, 3.6.1.55 F AdP-ribose pyrophosphatase
LBMMPJFA_01616 1.7e-212 nadD 2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55 H adenylyltransferase
LBMMPJFA_01617 1.8e-256 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
LBMMPJFA_01618 1e-69 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
LBMMPJFA_01619 1.9e-77 K DNA-binding transcription factor activity
LBMMPJFA_01620 0.0 lmrA1 V abc transporter atp-binding protein
LBMMPJFA_01621 0.0 lmrA2 V abc transporter atp-binding protein
LBMMPJFA_01622 5.4e-45 K Acetyltransferase (GNAT) family
LBMMPJFA_01623 3.2e-78 sptS 2.7.13.3 T Histidine kinase
LBMMPJFA_01624 4.9e-131 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
LBMMPJFA_01625 1.3e-91 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
LBMMPJFA_01626 5.3e-161 cvfB S Protein conserved in bacteria
LBMMPJFA_01627 7.4e-35 yozE S Belongs to the UPF0346 family
LBMMPJFA_01628 6.7e-124 usp 3.5.1.104, 3.5.1.28 CBM50 S pathogenesis
LBMMPJFA_01629 2.3e-61 rlpA M LysM domain protein
LBMMPJFA_01630 2.3e-190 phoH T phosphate starvation-inducible protein PhoH
LBMMPJFA_01634 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LBMMPJFA_01635 1.8e-164 K transcriptional regulator (lysR family)
LBMMPJFA_01636 1.4e-186 coiA 3.6.4.12 S Competence protein
LBMMPJFA_01637 0.0 pepF E oligoendopeptidase F
LBMMPJFA_01638 5.4e-127 yrrM 2.1.1.104 S O-Methyltransferase
LBMMPJFA_01639 1.3e-167 prsA 3.1.3.16, 5.2.1.8 O peptidyl-prolyl cis-trans isomerase activity
LBMMPJFA_01640 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LBMMPJFA_01641 7.9e-24 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
LBMMPJFA_01642 6.9e-179 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
LBMMPJFA_01643 3.9e-120 3.4.17.14, 3.5.1.28 NU amidase activity
LBMMPJFA_01644 4.9e-145 cnhA 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
LBMMPJFA_01645 1.7e-226 mtnE 2.6.1.83 E mutations do not affect methionine salvage in vivo however
LBMMPJFA_01646 1.4e-189 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
LBMMPJFA_01647 1.5e-222 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
LBMMPJFA_01648 7.9e-129 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
LBMMPJFA_01649 1.6e-210 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
LBMMPJFA_01650 2.2e-130 yxkH G deacetylase
LBMMPJFA_01651 2.3e-237 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
LBMMPJFA_01652 2.8e-154 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
LBMMPJFA_01653 5.5e-153 rarD S Transporter
LBMMPJFA_01654 2.2e-15 T peptidase
LBMMPJFA_01655 8.9e-14 coiA 3.6.4.12 S Competence protein
LBMMPJFA_01656 4.1e-112 S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LBMMPJFA_01657 1.9e-46 2.3.1.128, 5.2.1.8 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LBMMPJFA_01658 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
LBMMPJFA_01659 3.2e-16 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LBMMPJFA_01660 4.3e-124 atpB C it plays a direct role in the translocation of protons across the membrane
LBMMPJFA_01661 3.3e-78 atpF C ATP synthase F(0) sector subunit b
LBMMPJFA_01662 9.3e-87 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LBMMPJFA_01663 3.8e-279 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LBMMPJFA_01664 7.4e-158 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LBMMPJFA_01665 2.7e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LBMMPJFA_01666 5.2e-67 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
LBMMPJFA_01667 2.8e-230 ftsW D Belongs to the SEDS family
LBMMPJFA_01668 9.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LBMMPJFA_01669 1.4e-136 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
LBMMPJFA_01670 2.8e-111 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LBMMPJFA_01671 1.9e-161 holB 2.7.7.7 L dna polymerase iii
LBMMPJFA_01672 2.1e-135 yaaT S stage 0 sporulation protein
LBMMPJFA_01673 9.5e-55 yabA L Involved in initiation control of chromosome replication
LBMMPJFA_01674 3.9e-159 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LBMMPJFA_01675 7.5e-233 amt P Ammonium Transporter
LBMMPJFA_01676 1.1e-53 glnB K Belongs to the P(II) protein family
LBMMPJFA_01677 4.9e-106 mur1 NU mannosyl-glycoprotein
LBMMPJFA_01678 1.7e-148 XK27_04800 S Sucrose-6F-phosphate phosphohydrolase
LBMMPJFA_01679 2.9e-68 nptA P sodium-dependent phosphate transmembrane transporter activity
LBMMPJFA_01680 2.1e-221 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
LBMMPJFA_01681 1.8e-53
LBMMPJFA_01682 7.5e-26
LBMMPJFA_01683 1.5e-59
LBMMPJFA_01684 6.1e-63 S membrane
LBMMPJFA_01685 4.8e-176 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
LBMMPJFA_01686 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
LBMMPJFA_01687 4.5e-39 ynzC S UPF0291 protein
LBMMPJFA_01688 1.8e-254 cycA E permease
LBMMPJFA_01689 1.1e-09 uvrX 2.7.7.7 L ImpB mucB samB family
LBMMPJFA_01690 2.8e-24 2.7.1.208, 2.7.1.211 G protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LBMMPJFA_01691 5.8e-71 pts33BCA G pts system
LBMMPJFA_01692 9e-96 pts33BCA G pts system
LBMMPJFA_01693 9.7e-77 2.7.1.199, 2.7.1.211 G PTS glucose transporter subunit IIA
LBMMPJFA_01694 3.2e-141 ppiA 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LBMMPJFA_01695 1.2e-165 L integrase core domain
LBMMPJFA_01696 3.9e-122 L Transposase
LBMMPJFA_01701 1.4e-167 fhuR K transcriptional regulator (lysR family)
LBMMPJFA_01702 1.5e-77 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LBMMPJFA_01703 4.5e-163 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LBMMPJFA_01704 3.7e-88 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
LBMMPJFA_01705 4.9e-227 pyrP F uracil Permease
LBMMPJFA_01706 1e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
LBMMPJFA_01707 1.1e-211 carA 6.3.5.5 F carbamoyl-phosphate synthetase glutamine chain
LBMMPJFA_01708 0.0 carB 6.3.5.5 F carbamoyl-phosphate synthetase ammonia chain
LBMMPJFA_01709 2.2e-134 2.1.1.223 S Putative SAM-dependent methyltransferase
LBMMPJFA_01710 4e-37 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LBMMPJFA_01711 1.6e-33 V permease protein
LBMMPJFA_01712 1e-09 V permease protein
LBMMPJFA_01713 8.8e-21 V permease protein
LBMMPJFA_01714 1.7e-07 V efflux transmembrane transporter activity
LBMMPJFA_01715 1.1e-24 ytrF V efflux transmembrane transporter activity
LBMMPJFA_01716 5.6e-78 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LBMMPJFA_01717 3.9e-52 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
LBMMPJFA_01718 8.8e-223 L Transposase
LBMMPJFA_01720 0.0 mdlB V abc transporter atp-binding protein
LBMMPJFA_01721 0.0 lmrA V abc transporter atp-binding protein
LBMMPJFA_01722 4.6e-199 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
LBMMPJFA_01723 5.8e-121 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
LBMMPJFA_01724 6.3e-214 2.7.13.3 T signal transduction protein with a C-terminal ATPase domain
LBMMPJFA_01725 2.5e-132 rr02 KT response regulator
LBMMPJFA_01726 3.5e-202 2.7.7.73, 2.7.7.80 H Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
LBMMPJFA_01727 4.8e-168 V ABC transporter
LBMMPJFA_01728 5.4e-122 sagI S ABC-2 type transporter
LBMMPJFA_01729 4.5e-196 yceA S Belongs to the UPF0176 family
LBMMPJFA_01730 8e-28 XK27_00085 K Transcriptional
LBMMPJFA_01731 1.7e-23
LBMMPJFA_01732 1.2e-143 deoD_1 2.4.2.3 F Phosphorylase superfamily
LBMMPJFA_01733 2.8e-112 S VIT family
LBMMPJFA_01734 7.4e-132 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
LBMMPJFA_01735 2.4e-217 hipO 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
LBMMPJFA_01736 3.4e-17 ald 1.4.1.1 E alanine dehydrogenase activity
LBMMPJFA_01737 2e-47 ald 1.4.1.1 C Belongs to the AlaDH PNT family
LBMMPJFA_01738 5.7e-247 merA 1.16.1.1 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LBMMPJFA_01739 8.8e-104 GBS0088 J protein conserved in bacteria
LBMMPJFA_01740 2.5e-142 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
LBMMPJFA_01741 1.5e-172 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
LBMMPJFA_01742 1.6e-177 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I GHMP kinases N terminal domain
LBMMPJFA_01743 7.6e-191 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
LBMMPJFA_01744 1.5e-253 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LBMMPJFA_01745 1e-96 nudF 3.6.1.13 L AdP-ribose pyrophosphatase
LBMMPJFA_01746 2.5e-21
LBMMPJFA_01747 2e-118 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LBMMPJFA_01749 3.5e-07 U protein secretion
LBMMPJFA_01750 2.5e-51 U protein secretion
LBMMPJFA_01751 7.4e-08 M Pilin isopeptide linkage domain protein
LBMMPJFA_01752 7.6e-191 dgs 2.4.1.208 GT4 M Glycosyltransferase, group 1 family protein
LBMMPJFA_01753 1.5e-247 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
LBMMPJFA_01754 3.5e-49 XK27_13030
LBMMPJFA_01755 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LBMMPJFA_01756 8.3e-55 S hydrolase activity, acting on ester bonds
LBMMPJFA_01757 9.4e-71 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
LBMMPJFA_01758 6.8e-164 S Protein of unknown function (DUF3114)
LBMMPJFA_01759 1.2e-22 S Protein of unknown function (DUF3114)
LBMMPJFA_01760 1.5e-118 yqfA K protein, Hemolysin III
LBMMPJFA_01761 1e-25 K hmm pf08876
LBMMPJFA_01762 2.7e-233 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
LBMMPJFA_01763 1.7e-218 mvaS 2.3.3.10 I synthase
LBMMPJFA_01764 2.2e-167 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LBMMPJFA_01765 3.4e-91 folA 1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LBMMPJFA_01766 9.7e-22
LBMMPJFA_01767 2e-225 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LBMMPJFA_01768 3e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
LBMMPJFA_01769 1.5e-250 mmuP E amino acid
LBMMPJFA_01770 1.2e-177 mmuM 1.5.1.20, 2.1.1.10 H Homocysteine
LBMMPJFA_01771 1.4e-29 S Domain of unknown function (DUF1912)
LBMMPJFA_01772 4.9e-15 L Helix-hairpin-helix DNA-binding motif class 1
LBMMPJFA_01773 7.1e-102 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
LBMMPJFA_01774 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LBMMPJFA_01775 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LBMMPJFA_01776 2.4e-200 ilvE 2.6.1.42 E Aminotransferase
LBMMPJFA_01779 8.4e-205 rpsA 1.17.7.4 J ribosomal protein S1
LBMMPJFA_01782 1.1e-44 S Domain of Unknown Function with PDB structure (DUF3862)
LBMMPJFA_01783 1.3e-29 S Domain of Unknown Function with PDB structure (DUF3862)
LBMMPJFA_01784 3.7e-70 M Pfam SNARE associated Golgi protein
LBMMPJFA_01785 3.4e-233 murN 2.3.2.10, 2.3.2.16 V FemAB family
LBMMPJFA_01786 1.6e-08 S oxidoreductase
LBMMPJFA_01787 9.3e-59 S oxidoreductase
LBMMPJFA_01788 9.7e-66 S oxidoreductase
LBMMPJFA_01789 3.7e-48 XK27_09445 S Domain of unknown function (DUF1827)
LBMMPJFA_01790 1.8e-86 mutT 3.5.4.33, 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
LBMMPJFA_01791 0.0 clpE O Belongs to the ClpA ClpB family
LBMMPJFA_01792 1.2e-180 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LBMMPJFA_01793 1.3e-34 ykuJ S protein conserved in bacteria
LBMMPJFA_01794 7.5e-118 WQ51_01820 P Binding-protein-dependent transport system inner membrane component
LBMMPJFA_01795 2.2e-131 glnQ 3.6.3.21 E abc transporter atp-binding protein
LBMMPJFA_01796 3.1e-78 feoA P FeoA domain protein
LBMMPJFA_01797 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
LBMMPJFA_01798 1.5e-07
LBMMPJFA_01799 2.4e-104 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
LBMMPJFA_01800 2.2e-45 K sequence-specific DNA binding
LBMMPJFA_01801 1.5e-35 yugF I carboxylic ester hydrolase activity
LBMMPJFA_01802 7.5e-23 I Alpha/beta hydrolase family
LBMMPJFA_01803 3.9e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LBMMPJFA_01804 7.8e-149 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LBMMPJFA_01805 0.0 pbp2b 3.4.16.4 M penicillin-binding protein
LBMMPJFA_01806 4.9e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LBMMPJFA_01807 5.8e-64 licT K transcriptional antiterminator
LBMMPJFA_01808 6.8e-53 licT K transcriptional antiterminator
LBMMPJFA_01809 5.9e-88 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LBMMPJFA_01810 1.7e-64 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
LBMMPJFA_01811 1.3e-165 era M An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LBMMPJFA_01812 1.9e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
LBMMPJFA_01813 1.1e-104 coaE 2.7.1.24, 3.2.2.23, 4.2.99.18 GH23 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LBMMPJFA_01814 2.5e-220 mdtG EGP Major facilitator Superfamily
LBMMPJFA_01815 2e-33 secG U Preprotein translocase subunit SecG
LBMMPJFA_01816 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
LBMMPJFA_01817 1.1e-80 smpB O the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
LBMMPJFA_01818 9.6e-277 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LBMMPJFA_01819 1.7e-63 yugI 5.3.1.9 J RNA binding protein, contains ribosomal protein S1 domain
LBMMPJFA_01820 4.2e-211 pepQ 3.4.13.9 E Belongs to the peptidase M24B family
LBMMPJFA_01821 4.4e-183 ccpA K Catabolite control protein A
LBMMPJFA_01822 2.8e-28 yyaQ S YjbR
LBMMPJFA_01823 6.6e-101 yyaQ V Protein conserved in bacteria
LBMMPJFA_01824 1.3e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
LBMMPJFA_01825 1e-78 yueI S Protein of unknown function (DUF1694)
LBMMPJFA_01826 9.6e-247 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
LBMMPJFA_01827 2e-25 WQ51_00785
LBMMPJFA_01828 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
LBMMPJFA_01829 2e-219 ywbD 2.1.1.191 J Methyltransferase
LBMMPJFA_01830 8.6e-122 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
LBMMPJFA_01831 1.7e-162 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LBMMPJFA_01832 3.5e-202 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
LBMMPJFA_01833 4.5e-219 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
LBMMPJFA_01834 2.2e-207 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
LBMMPJFA_01835 3.2e-53 yheA S Belongs to the UPF0342 family
LBMMPJFA_01836 3e-173 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
LBMMPJFA_01837 2.6e-236 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
LBMMPJFA_01838 1.7e-87 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LBMMPJFA_01839 6.7e-153 pheA 4.2.1.51 E Prephenate dehydratase
LBMMPJFA_01840 6.4e-252 msrR K Transcriptional regulator
LBMMPJFA_01841 2.2e-149 ydiA P C4-dicarboxylate transporter malic acid transport protein
LBMMPJFA_01842 2.4e-203 I acyl-CoA dehydrogenase
LBMMPJFA_01843 4.5e-97 mip S hydroperoxide reductase activity
LBMMPJFA_01844 1.7e-257 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LBMMPJFA_01845 8.9e-20
LBMMPJFA_01846 3.2e-46
LBMMPJFA_01847 1e-31 K Cro/C1-type HTH DNA-binding domain
LBMMPJFA_01848 7.8e-50 dam 2.1.1.72 L D12 class N6 adenine-specific DNA methyltransferase
LBMMPJFA_01849 9.7e-34 estA E GDSL-like Lipase/Acylhydrolase
LBMMPJFA_01850 1.1e-94
LBMMPJFA_01851 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
LBMMPJFA_01852 4.2e-172 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LBMMPJFA_01853 3.1e-53 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LBMMPJFA_01854 2.6e-194 S CRISPR-associated protein Csn2 subfamily St
LBMMPJFA_01855 2.7e-146 ycgQ S TIGR03943 family
LBMMPJFA_01856 4.6e-155 XK27_03015 S permease
LBMMPJFA_01858 0.0 yhgF K Transcriptional accessory protein
LBMMPJFA_01859 9.9e-42 pspC KT PspC domain
LBMMPJFA_01860 2e-169 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
LBMMPJFA_01861 4e-147 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LBMMPJFA_01863 5.5e-69 ytxH S General stress protein
LBMMPJFA_01865 2e-177 yegQ O Peptidase U32
LBMMPJFA_01866 3.4e-252 yegQ O Peptidase U32
LBMMPJFA_01867 8.1e-46 S CHY zinc finger
LBMMPJFA_01868 8.4e-88 bioY S biotin synthase
LBMMPJFA_01870 1.1e-33 XK27_12190 S protein conserved in bacteria
LBMMPJFA_01871 1.1e-234 mntH P H( )-stimulated, divalent metal cation uptake system
LBMMPJFA_01872 4.8e-11
LBMMPJFA_01873 6e-209 dcm 2.1.1.37 H C-5 cytosine-specific DNA methylase
LBMMPJFA_01874 4.1e-225 mutH L DNA mismatch repair enzyme MutH
LBMMPJFA_01875 5.2e-29 S SIR2-like domain
LBMMPJFA_01876 1.2e-33 S SIR2-like domain
LBMMPJFA_01877 9.2e-286 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
LBMMPJFA_01878 5.5e-157 M LysM domain
LBMMPJFA_01879 7.6e-16
LBMMPJFA_01880 2.3e-175 S hydrolase
LBMMPJFA_01881 1.9e-115 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase
LBMMPJFA_01882 7.9e-82 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LBMMPJFA_01883 1.6e-145 XK27_00880 3.5.1.28 M Glycosyl hydrolase, family 25
LBMMPJFA_01884 2.7e-27 P Hemerythrin HHE cation binding domain protein
LBMMPJFA_01885 2.3e-113 1.14.14.5 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LBMMPJFA_01886 1.7e-10 MA20_36090 S Protein of unknown function (DUF2974)
LBMMPJFA_01887 1.1e-33 MA20_36090 S Protein of unknown function (DUF2974)
LBMMPJFA_01888 0.0 hsdR 3.1.21.3 V Type I restriction enzyme R protein N terminus (HSDR_N)
LBMMPJFA_01889 3.9e-290 hsdM 2.1.1.72 V N-6 DNA Methylase
LBMMPJFA_01890 2.2e-147 3.1.21.3 V type I restriction modification DNA specificity domain
LBMMPJFA_01892 2.5e-44
LBMMPJFA_01893 3e-38
LBMMPJFA_01894 2.3e-171 spd F DNA RNA non-specific endonuclease
LBMMPJFA_01895 1.5e-92 lemA S LemA family
LBMMPJFA_01896 1.8e-135 htpX O Belongs to the peptidase M48B family
LBMMPJFA_01897 4.2e-75 S Psort location CytoplasmicMembrane, score
LBMMPJFA_01898 6.2e-56 S Domain of unknown function (DUF4430)
LBMMPJFA_01899 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
LBMMPJFA_01900 1.2e-183 holA 2.7.7.7 L DNA polymerase III delta subunit
LBMMPJFA_01901 8.5e-113 sodA 1.15.1.1 C radicals which are normally produced within the cells and which are toxic to biological systems
LBMMPJFA_01902 2.7e-160 L Transposase
LBMMPJFA_01903 3e-50 L Transposase
LBMMPJFA_01904 2.6e-189 3.5.2.6 V D-alanyl-D-alanine carboxypeptidase
LBMMPJFA_01905 4.4e-115 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
LBMMPJFA_01906 3.5e-91 dps P Belongs to the Dps family
LBMMPJFA_01907 1.1e-80 perR P Belongs to the Fur family
LBMMPJFA_01908 8.4e-28 yqgQ S protein conserved in bacteria
LBMMPJFA_01909 2.2e-179 glk 2.7.1.2 G Glucokinase
LBMMPJFA_01910 0.0 typA T GTP-binding protein TypA
LBMMPJFA_01912 1.6e-252 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LBMMPJFA_01913 1e-201 murG 2.4.1.227 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LBMMPJFA_01914 1.8e-177 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
LBMMPJFA_01915 8e-252 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
LBMMPJFA_01916 5.4e-237 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LBMMPJFA_01917 2.3e-122 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LBMMPJFA_01918 6.8e-96 sepF D cell septum assembly
LBMMPJFA_01919 2.6e-34 yggT D integral membrane protein
LBMMPJFA_01920 4.2e-144 ylmH T S4 RNA-binding domain
LBMMPJFA_01921 1.8e-135 divIVA D Cell division protein DivIVA
LBMMPJFA_01922 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LBMMPJFA_01923 5.5e-30
LBMMPJFA_01924 8.4e-10
LBMMPJFA_01925 3.2e-231 mntH P Mn2 and Fe2 transporters of the NRAMP family
LBMMPJFA_01926 2e-45 rpmE2 J 50S ribosomal protein L31
LBMMPJFA_01927 8.3e-176 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
LBMMPJFA_01928 1e-184 nrnA 3.1.13.3, 3.1.3.7 S domain protein
LBMMPJFA_01929 8.9e-155 gst O Glutathione S-transferase
LBMMPJFA_01930 4.6e-188 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LBMMPJFA_01931 4.5e-111 tdk 2.7.1.21 F thymidine kinase
LBMMPJFA_01932 3e-193 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LBMMPJFA_01933 1.2e-154 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
LBMMPJFA_01934 9.7e-109 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
LBMMPJFA_01935 1.8e-234 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
LBMMPJFA_01936 1.2e-177 ndpA S 37-kD nucleoid-associated bacterial protein
LBMMPJFA_01937 8e-100 pvaA M lytic transglycosylase activity
LBMMPJFA_01938 0.0 yfiB1 V abc transporter atp-binding protein
LBMMPJFA_01939 0.0 XK27_10035 V abc transporter atp-binding protein
LBMMPJFA_01940 1.7e-09 S D-Ala-teichoic acid biosynthesis protein
LBMMPJFA_01941 1.4e-297 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LBMMPJFA_01942 3.9e-237 dltB M Membrane protein involved in D-alanine export
LBMMPJFA_01943 1.7e-35 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LBMMPJFA_01944 3.6e-230 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
LBMMPJFA_01945 4.5e-233 L Transposase
LBMMPJFA_01946 9.8e-32 L Integrase core domain protein
LBMMPJFA_01947 9.6e-32 L transposition
LBMMPJFA_01948 6.5e-54 L transposition
LBMMPJFA_01949 7.7e-19 L transposase activity
LBMMPJFA_01950 2.5e-40 L Transposase
LBMMPJFA_01951 0.0 3.6.3.8 P cation transport ATPase
LBMMPJFA_01952 0.0 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH component I
LBMMPJFA_01953 1.9e-105 V Abi-like protein
LBMMPJFA_01955 2.3e-12
LBMMPJFA_01957 2e-296 S DNA primase
LBMMPJFA_01958 3e-164 KL Phage plasmid primase P4 family
LBMMPJFA_01959 2.4e-22
LBMMPJFA_01960 1.2e-14
LBMMPJFA_01964 1.8e-19 K Cro/C1-type HTH DNA-binding domain
LBMMPJFA_01965 1e-21 xre K transcriptional
LBMMPJFA_01966 6.9e-220 sip L Belongs to the 'phage' integrase family
LBMMPJFA_01968 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LBMMPJFA_01969 7.3e-166 metF 1.5.1.20 E reductase
LBMMPJFA_01970 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
LBMMPJFA_01971 1.7e-94 panT S ECF transporter, substrate-specific component
LBMMPJFA_01972 4.8e-94 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LBMMPJFA_01973 1.2e-120 coaB 4.1.1.36, 6.3.2.5 H Phosphopantothenate-cysteine ligase
LBMMPJFA_01974 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
LBMMPJFA_01975 6.4e-66 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LBMMPJFA_01976 2.8e-40 T PhoQ Sensor
LBMMPJFA_01977 1.7e-43 T PhoQ Sensor
LBMMPJFA_01978 5.8e-79 T PhoQ Sensor
LBMMPJFA_01979 6.7e-122 L Helix-turn-helix domain
LBMMPJFA_01980 1.2e-165 L integrase core domain
LBMMPJFA_01981 2.1e-30 rpsT J rRNA binding
LBMMPJFA_01982 1.9e-172 coaA 2.7.1.33 F Pantothenic acid kinase
LBMMPJFA_01983 1.8e-107 rsmC 2.1.1.172 J Methyltransferase small domain protein
LBMMPJFA_01984 1.2e-57 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
LBMMPJFA_01985 6e-98 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
LBMMPJFA_01986 1.4e-22 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
LBMMPJFA_01987 4e-63 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
LBMMPJFA_01988 1.3e-69 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
LBMMPJFA_01989 9.5e-192 tcsA S ABC-type transport system, periplasmic component surface lipoprotein
LBMMPJFA_01990 3.7e-282 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
LBMMPJFA_01991 4.7e-191 yufP S Belongs to the binding-protein-dependent transport system permease family
LBMMPJFA_01992 4.8e-171 yufQ S Belongs to the binding-protein-dependent transport system permease family
LBMMPJFA_01993 8.9e-121 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
LBMMPJFA_01994 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
LBMMPJFA_01995 3.1e-81 ypmB S Protein conserved in bacteria
LBMMPJFA_01996 6.5e-218 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
LBMMPJFA_01997 1.7e-262 asnS 6.1.1.22 J Catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
LBMMPJFA_01998 1.5e-07
LBMMPJFA_01999 2.4e-30
LBMMPJFA_02000 3e-13
LBMMPJFA_02001 3e-63 tdcF 3.5.99.10 J endoribonuclease L-PSP
LBMMPJFA_02002 2e-123 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
LBMMPJFA_02003 2.2e-81 queD 4.1.2.50, 4.2.3.12 H synthase
LBMMPJFA_02004 3.9e-133 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
LBMMPJFA_02005 2.5e-94 queF 1.7.1.13 S Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily
LBMMPJFA_02006 4.2e-18 D nuclear chromosome segregation
LBMMPJFA_02007 1.5e-135 yejC S cyclic nucleotide-binding protein
LBMMPJFA_02008 1.2e-163 rapZ S Displays ATPase and GTPase activities
LBMMPJFA_02009 1.8e-181 ybhK S Required for morphogenesis under gluconeogenic growth conditions
LBMMPJFA_02010 8.7e-162 whiA K May be required for sporulation
LBMMPJFA_02011 8e-90 pepD E Dipeptidase
LBMMPJFA_02012 5.8e-41 pepD E dipeptidase activity
LBMMPJFA_02013 5.4e-32 cspD K Cold shock protein domain
LBMMPJFA_02014 1.6e-249 L Transposase
LBMMPJFA_02015 9.4e-43 K Cold-Shock Protein
LBMMPJFA_02016 3.6e-224 L Transposase, Mutator family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)