ORF_ID e_value Gene_name EC_number CAZy COGs Description
PMCDCCLF_00001 2e-247 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PMCDCCLF_00002 2e-208 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PMCDCCLF_00003 5e-37 yaaA S S4 domain protein YaaA
PMCDCCLF_00004 1.9e-206 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PMCDCCLF_00005 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PMCDCCLF_00006 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PMCDCCLF_00007 1.5e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
PMCDCCLF_00008 6.8e-62 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PMCDCCLF_00009 6.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PMCDCCLF_00010 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PMCDCCLF_00011 1.4e-67 rplI J Binds to the 23S rRNA
PMCDCCLF_00012 7.8e-242 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PMCDCCLF_00013 4.4e-225 yttB EGP Major facilitator Superfamily
PMCDCCLF_00014 3.6e-143 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PMCDCCLF_00015 5.6e-228 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PMCDCCLF_00017 1.9e-276 E ABC transporter, substratebinding protein
PMCDCCLF_00019 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PMCDCCLF_00020 5.2e-184 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PMCDCCLF_00021 6.3e-197 glgD 2.4.1.21, 2.7.7.27 GT5 G Nucleotidyl transferase
PMCDCCLF_00022 8.1e-279 glgA 2.4.1.21 GT5 F Synthesizes alpha-1,4-glucan chains using ADP-glucose
PMCDCCLF_00023 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PMCDCCLF_00024 0.0 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
PMCDCCLF_00026 4.5e-143 S haloacid dehalogenase-like hydrolase
PMCDCCLF_00027 1e-119 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PMCDCCLF_00028 0.0 trePP 2.4.1.216, 2.4.1.8, 3.1.3.12, 3.2.1.28 GH37,GH65 G Glycosyl hydrolase family 65 central catalytic domain
PMCDCCLF_00029 1.3e-78 S Pyridoxamine 5'-phosphate oxidase
PMCDCCLF_00030 1.6e-31 cspA K Cold shock protein domain
PMCDCCLF_00031 1.7e-37
PMCDCCLF_00033 6.2e-131 K response regulator
PMCDCCLF_00034 0.0 vicK 2.7.13.3 T Histidine kinase
PMCDCCLF_00035 2e-244 yycH S YycH protein
PMCDCCLF_00036 2.9e-151 yycI S YycH protein
PMCDCCLF_00037 8.9e-158 vicX 3.1.26.11 S domain protein
PMCDCCLF_00038 6.8e-173 htrA 3.4.21.107 O serine protease
PMCDCCLF_00039 1.2e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PMCDCCLF_00040 1.5e-95 K Bacterial regulatory proteins, tetR family
PMCDCCLF_00041 1.2e-261 calB 1.2.1.68 C Belongs to the aldehyde dehydrogenase family
PMCDCCLF_00042 6.8e-121 ung2 3.2.2.27 L Uracil-DNA glycosylase
PMCDCCLF_00043 1.3e-119 pnb C nitroreductase
PMCDCCLF_00044 2.6e-64 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
PMCDCCLF_00045 2e-115 S Elongation factor G-binding protein, N-terminal
PMCDCCLF_00046 0.0 nqr 1.3.5.4, 1.5.1.36 C FMN_bind
PMCDCCLF_00047 1.6e-258 P Sodium:sulfate symporter transmembrane region
PMCDCCLF_00048 5.7e-158 K LysR family
PMCDCCLF_00049 1e-72 C FMN binding
PMCDCCLF_00050 1.1e-74 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PMCDCCLF_00051 2.3e-164 ptlF S KR domain
PMCDCCLF_00052 6.4e-159 adc 4.1.1.4 Q Acetoacetate decarboxylase (ADC)
PMCDCCLF_00053 1.3e-122 drgA C Nitroreductase family
PMCDCCLF_00054 4.9e-290 QT PucR C-terminal helix-turn-helix domain
PMCDCCLF_00055 5.5e-121 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PMCDCCLF_00056 1.1e-194 pva1 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PMCDCCLF_00057 7.4e-250 yjjP S Putative threonine/serine exporter
PMCDCCLF_00058 1.7e-134 wzb 3.1.3.48 T Tyrosine phosphatase family
PMCDCCLF_00059 1.4e-254 1.14.14.9 Q 4-hydroxyphenylacetate
PMCDCCLF_00060 2.9e-81 6.3.3.2 S ASCH
PMCDCCLF_00061 1.4e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
PMCDCCLF_00062 5.5e-172 yobV1 K WYL domain
PMCDCCLF_00063 1e-116 azoR C Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PMCDCCLF_00064 0.0 tetP J elongation factor G
PMCDCCLF_00065 8.2e-39 S Protein of unknown function
PMCDCCLF_00066 2.7e-61 S Protein of unknown function
PMCDCCLF_00067 3.6e-152 EG EamA-like transporter family
PMCDCCLF_00068 3.6e-93 MA20_25245 K FR47-like protein
PMCDCCLF_00069 2e-126 hchA S DJ-1/PfpI family
PMCDCCLF_00070 5.4e-181 1.1.1.1 C nadph quinone reductase
PMCDCCLF_00071 9.3e-50 K helix_turn_helix, Arsenical Resistance Operon Repressor
PMCDCCLF_00072 3.9e-235 mepA V MATE efflux family protein
PMCDCCLF_00073 1.3e-167 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
PMCDCCLF_00074 1e-139 S Belongs to the UPF0246 family
PMCDCCLF_00075 6e-76
PMCDCCLF_00076 4.6e-311 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
PMCDCCLF_00077 1.2e-140
PMCDCCLF_00079 7e-110 2.7.7.47 H Mediates bacterial resistance to the antibiotics streptomycin and spectomycin
PMCDCCLF_00080 4.8e-40
PMCDCCLF_00081 3.9e-128 cbiO P ABC transporter
PMCDCCLF_00082 2.6e-149 P Cobalt transport protein
PMCDCCLF_00083 4.8e-182 nikMN P PDGLE domain
PMCDCCLF_00084 4.2e-121 K Crp-like helix-turn-helix domain
PMCDCCLF_00085 1e-240 larA 5.1.2.1 S Domain of unknown function (DUF2088)
PMCDCCLF_00086 2.4e-125 larB S AIR carboxylase
PMCDCCLF_00087 6.3e-132 larC 4.99.1.12 S Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
PMCDCCLF_00088 5e-75 larC 4.99.1.12 S Protein of unknown function DUF111
PMCDCCLF_00089 1.5e-132 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PMCDCCLF_00090 2.8e-151 larE S NAD synthase
PMCDCCLF_00091 8.7e-176 1.6.5.5 C Zinc-binding dehydrogenase
PMCDCCLF_00092 2.2e-137 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PMCDCCLF_00093 9.1e-150 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PMCDCCLF_00094 2.5e-110 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PMCDCCLF_00095 1.9e-204 cytX U Belongs to the purine-cytosine permease (2.A.39) family
PMCDCCLF_00096 5.1e-136 S peptidase C26
PMCDCCLF_00097 8.9e-303 L HIRAN domain
PMCDCCLF_00098 9.9e-85 F NUDIX domain
PMCDCCLF_00099 2.6e-250 yifK E Amino acid permease
PMCDCCLF_00100 1.7e-120
PMCDCCLF_00101 5.6e-149 ydjP I Alpha/beta hydrolase family
PMCDCCLF_00102 0.0 pacL1 P P-type ATPase
PMCDCCLF_00103 1.6e-28 KT PspC domain
PMCDCCLF_00104 3e-110 S NADPH-dependent FMN reductase
PMCDCCLF_00105 1.9e-75 papX3 K Transcriptional regulator
PMCDCCLF_00106 4.6e-73 hsp1 O Belongs to the small heat shock protein (HSP20) family
PMCDCCLF_00107 4.2e-80 S Protein of unknown function (DUF3021)
PMCDCCLF_00108 4.7e-227 mdtG EGP Major facilitator Superfamily
PMCDCCLF_00109 5e-51 cadC1 K helix_turn_helix, Arsenical Resistance Operon Repressor
PMCDCCLF_00110 8.1e-216 yeaN P Transporter, major facilitator family protein
PMCDCCLF_00112 2.9e-159 S reductase
PMCDCCLF_00113 3.6e-165 1.1.1.65 C Aldo keto reductase
PMCDCCLF_00114 1.3e-81 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase like
PMCDCCLF_00115 0.0 lai 4.2.1.53 S Myosin-crossreactive antigen
PMCDCCLF_00116 5e-52
PMCDCCLF_00117 7.5e-259
PMCDCCLF_00118 4e-209 C Oxidoreductase
PMCDCCLF_00119 4.9e-151 cbiQ P cobalt transport
PMCDCCLF_00120 0.0 ykoD P ABC transporter, ATP-binding protein
PMCDCCLF_00121 2.5e-98 S UPF0397 protein
PMCDCCLF_00122 1.6e-129 K UbiC transcription regulator-associated domain protein
PMCDCCLF_00123 8.3e-54 K Transcriptional regulator PadR-like family
PMCDCCLF_00124 4.6e-143
PMCDCCLF_00125 7.6e-149
PMCDCCLF_00126 9.1e-89
PMCDCCLF_00127 5.5e-144 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
PMCDCCLF_00128 2.3e-170 yjjC V ABC transporter
PMCDCCLF_00129 1.6e-299 M Exporter of polyketide antibiotics
PMCDCCLF_00130 1.6e-117 K Transcriptional regulator
PMCDCCLF_00131 2.1e-277 C Electron transfer flavoprotein FAD-binding domain
PMCDCCLF_00132 8.6e-74 folT 2.7.13.3 T ECF transporter, substrate-specific component
PMCDCCLF_00134 1.1e-92 K Bacterial regulatory proteins, tetR family
PMCDCCLF_00135 2.2e-190 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PMCDCCLF_00136 1.9e-186 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PMCDCCLF_00137 1.9e-101 dhaL 2.7.1.121 S Dak2
PMCDCCLF_00138 9e-57 dhaM 2.7.1.121 S PTS system fructose IIA component
PMCDCCLF_00139 8.6e-133 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PMCDCCLF_00140 2.9e-190 malR K Transcriptional regulator, LacI family
PMCDCCLF_00141 2e-180 yvdE K helix_turn _helix lactose operon repressor
PMCDCCLF_00142 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
PMCDCCLF_00143 2.1e-230 mdxE G Bacterial extracellular solute-binding protein
PMCDCCLF_00144 2.2e-227 malC P Binding-protein-dependent transport system inner membrane component
PMCDCCLF_00145 1.4e-161 malD P ABC transporter permease
PMCDCCLF_00146 1.8e-150 malA S maltodextrose utilization protein MalA
PMCDCCLF_00147 9.1e-261 malS 3.2.1.1 GH13 G Glycogen debranching enzyme, glucanotransferase domain
PMCDCCLF_00148 4e-209 msmK P Belongs to the ABC transporter superfamily
PMCDCCLF_00149 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PMCDCCLF_00150 0.0 3.2.1.96 G Glycosyl hydrolase family 85
PMCDCCLF_00151 1.5e-45 ygbF S Sugar efflux transporter for intercellular exchange
PMCDCCLF_00152 1.8e-169 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PMCDCCLF_00153 0.0 scrA 2.7.1.193, 2.7.1.211, 5.3.1.1 G phosphotransferase system
PMCDCCLF_00154 1.4e-305 scrB 3.2.1.26 GH32 G invertase
PMCDCCLF_00155 9.1e-173 scrR K Transcriptional regulator, LacI family
PMCDCCLF_00156 0.0 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
PMCDCCLF_00157 1.3e-165 3.5.1.10 C nadph quinone reductase
PMCDCCLF_00158 1.1e-217 nhaC C Na H antiporter NhaC
PMCDCCLF_00159 0.0 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
PMCDCCLF_00160 7.7e-166 mleR K LysR substrate binding domain
PMCDCCLF_00161 0.0 3.6.4.13 M domain protein
PMCDCCLF_00163 2.1e-157 hipB K Helix-turn-helix
PMCDCCLF_00164 0.0 oppA E ABC transporter, substratebinding protein
PMCDCCLF_00165 1.8e-309 oppA E ABC transporter, substratebinding protein
PMCDCCLF_00166 2.6e-79 yiaC K Acetyltransferase (GNAT) domain
PMCDCCLF_00167 2.3e-215 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMCDCCLF_00168 7e-203 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PMCDCCLF_00169 6.7e-113 pgm1 G phosphoglycerate mutase
PMCDCCLF_00170 1e-179 yghZ C Aldo keto reductase family protein
PMCDCCLF_00171 4.9e-34
PMCDCCLF_00172 1.3e-60 S Domain of unknown function (DU1801)
PMCDCCLF_00173 3.8e-162 FbpA K Domain of unknown function (DUF814)
PMCDCCLF_00174 4.5e-219 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PMCDCCLF_00176 3.5e-58 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PMCDCCLF_00177 8.5e-50 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PMCDCCLF_00178 2.9e-258 S ATPases associated with a variety of cellular activities
PMCDCCLF_00179 2.4e-61
PMCDCCLF_00180 1.5e-115 P cobalt transport
PMCDCCLF_00181 2e-258 P ABC transporter
PMCDCCLF_00182 3.1e-101 S ABC transporter permease
PMCDCCLF_00183 6.9e-89 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
PMCDCCLF_00184 4.1e-158 dkgB S reductase
PMCDCCLF_00185 4e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PMCDCCLF_00186 1e-69
PMCDCCLF_00187 4.7e-31 ygzD K Transcriptional
PMCDCCLF_00188 7.4e-132 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PMCDCCLF_00189 4.5e-174 P Major Facilitator Superfamily
PMCDCCLF_00190 1.3e-223 1.3.5.4 C FAD dependent oxidoreductase
PMCDCCLF_00191 4.8e-99 K Helix-turn-helix domain
PMCDCCLF_00192 1.5e-277 pipD E Dipeptidase
PMCDCCLF_00193 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
PMCDCCLF_00194 0.0 mtlR K Mga helix-turn-helix domain
PMCDCCLF_00195 1.7e-78 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMCDCCLF_00196 2.8e-221 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
PMCDCCLF_00197 2.1e-73
PMCDCCLF_00198 6.2e-57 trxA1 O Belongs to the thioredoxin family
PMCDCCLF_00199 6.1e-49
PMCDCCLF_00200 6.6e-96
PMCDCCLF_00201 5.9e-62
PMCDCCLF_00202 5e-81 ndk 2.7.4.6 F Belongs to the NDK family
PMCDCCLF_00203 7.6e-255 S Uncharacterized protein conserved in bacteria (DUF2252)
PMCDCCLF_00204 3.5e-97 yieF S NADPH-dependent FMN reductase
PMCDCCLF_00205 6.1e-94 cysE 2.3.1.30 E Bacterial transferase hexapeptide (six repeats)
PMCDCCLF_00206 9.8e-211 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PMCDCCLF_00207 4.5e-166 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PMCDCCLF_00208 7.8e-159 map 3.4.11.18 E Methionine Aminopeptidase
PMCDCCLF_00209 4.3e-141 pnuC H nicotinamide mononucleotide transporter
PMCDCCLF_00210 7.3e-43 S Protein of unknown function (DUF2089)
PMCDCCLF_00211 1.7e-42
PMCDCCLF_00212 3.5e-129 treR K UTRA
PMCDCCLF_00213 0.0 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
PMCDCCLF_00214 0.0 treB 2.7.1.193, 2.7.1.211 G phosphotransferase system
PMCDCCLF_00215 0.0 pts4ABC 2.7.1.193, 2.7.1.211 G phosphotransferase system, EIIB
PMCDCCLF_00216 1.4e-144
PMCDCCLF_00217 6.3e-100 ubiX 2.5.1.129 H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
PMCDCCLF_00218 1.3e-69
PMCDCCLF_00219 1.8e-72 K Transcriptional regulator
PMCDCCLF_00220 5.7e-121 K Bacterial regulatory proteins, tetR family
PMCDCCLF_00221 8.5e-233 mntH P H( )-stimulated, divalent metal cation uptake system
PMCDCCLF_00222 3.6e-117
PMCDCCLF_00223 5.2e-42
PMCDCCLF_00224 1e-40
PMCDCCLF_00225 9.7e-253 ydiC1 EGP Major facilitator Superfamily
PMCDCCLF_00226 3.3e-65 K helix_turn_helix, mercury resistance
PMCDCCLF_00227 6.8e-251 T PhoQ Sensor
PMCDCCLF_00228 6.4e-128 K Transcriptional regulatory protein, C terminal
PMCDCCLF_00229 1.8e-49
PMCDCCLF_00230 2.1e-129 yidA K Helix-turn-helix domain, rpiR family
PMCDCCLF_00231 1e-243 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMCDCCLF_00232 9.9e-57
PMCDCCLF_00233 2.1e-41
PMCDCCLF_00234 1.3e-182 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PMCDCCLF_00235 2.2e-257 loxD 1.1.3.15 C FAD linked oxidases, C-terminal domain
PMCDCCLF_00236 1.3e-47
PMCDCCLF_00237 2.7e-123 2.7.6.5 S RelA SpoT domain protein
PMCDCCLF_00238 1.2e-103 K transcriptional regulator
PMCDCCLF_00239 0.0 ydgH S MMPL family
PMCDCCLF_00240 1.1e-106 tag 3.2.2.20 L glycosylase
PMCDCCLF_00241 0.0 XK27_00720 S Leucine-rich repeat (LRR) protein
PMCDCCLF_00242 1.8e-193 yclI V MacB-like periplasmic core domain
PMCDCCLF_00243 7.1e-121 yclH V ABC transporter
PMCDCCLF_00244 1.6e-113 V CAAX protease self-immunity
PMCDCCLF_00245 1.6e-118 S CAAX protease self-immunity
PMCDCCLF_00246 1.7e-52 M Lysin motif
PMCDCCLF_00247 9.4e-54 lytE M LysM domain protein
PMCDCCLF_00248 7.4e-67 gcvH E Glycine cleavage H-protein
PMCDCCLF_00249 7.4e-177 sepS16B
PMCDCCLF_00250 1.3e-131
PMCDCCLF_00251 0.0 dinG 3.1.12.1, 3.6.4.12 KL DEAD_2
PMCDCCLF_00252 6.8e-57
PMCDCCLF_00253 3.1e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PMCDCCLF_00254 3.8e-78 elaA S GNAT family
PMCDCCLF_00255 1.7e-75 K Transcriptional regulator
PMCDCCLF_00256 3e-226 ndh 1.6.99.3 C NADH dehydrogenase
PMCDCCLF_00257 2.6e-37
PMCDCCLF_00258 2.5e-08 S Motility quorum-sensing regulator, toxin of MqsA
PMCDCCLF_00259 2.2e-30
PMCDCCLF_00260 7.1e-21 U Preprotein translocase subunit SecB
PMCDCCLF_00261 4e-206 potD P ABC transporter
PMCDCCLF_00262 3.4e-141 potC P ABC transporter permease
PMCDCCLF_00263 2.7e-149 potB P ABC transporter permease
PMCDCCLF_00264 3.5e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PMCDCCLF_00265 3.8e-96 puuR K Cupin domain
PMCDCCLF_00266 1.1e-83 6.3.3.2 S ASCH
PMCDCCLF_00267 1e-84 K GNAT family
PMCDCCLF_00268 3e-90 K acetyltransferase
PMCDCCLF_00269 8.1e-22
PMCDCCLF_00270 1.4e-59 ytrA K helix_turn_helix gluconate operon transcriptional repressor
PMCDCCLF_00271 2e-163 ytrB V ABC transporter
PMCDCCLF_00272 4.9e-190
PMCDCCLF_00273 1.1e-256 adhE 1.1.1.1, 1.2.1.10 C Aldehyde dehydrogenase family
PMCDCCLF_00274 2.8e-162 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PMCDCCLF_00276 2.3e-240 xylP1 G MFS/sugar transport protein
PMCDCCLF_00277 6.7e-122 qmcA O prohibitin homologues
PMCDCCLF_00278 1.1e-29
PMCDCCLF_00279 2.5e-280 pipD E Dipeptidase
PMCDCCLF_00280 3e-40
PMCDCCLF_00281 6.8e-96 bioY S BioY family
PMCDCCLF_00282 2.5e-175 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PMCDCCLF_00283 2.8e-60 S CHY zinc finger
PMCDCCLF_00284 2.2e-111 metQ P NLPA lipoprotein
PMCDCCLF_00285 8.7e-126 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PMCDCCLF_00286 1.3e-85 metI U Binding-protein-dependent transport system inner membrane component
PMCDCCLF_00287 4.2e-10 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PMCDCCLF_00288 3.1e-109 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PMCDCCLF_00289 4.2e-225 mtnE 2.6.1.83 E Aminotransferase
PMCDCCLF_00290 2.2e-218
PMCDCCLF_00291 3.5e-154 tagG U Transport permease protein
PMCDCCLF_00292 1e-201 tagH 3.6.3.38, 3.6.3.40 GM Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PMCDCCLF_00293 3.8e-44
PMCDCCLF_00294 2.5e-92 K Transcriptional regulator PadR-like family
PMCDCCLF_00295 3.5e-258 P Major Facilitator Superfamily
PMCDCCLF_00296 4.7e-241 amtB P ammonium transporter
PMCDCCLF_00297 1.6e-177 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PMCDCCLF_00298 3.7e-44
PMCDCCLF_00299 2.4e-101 zmp1 O Zinc-dependent metalloprotease
PMCDCCLF_00300 4.6e-120 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PMCDCCLF_00301 1.5e-310 mco Q Multicopper oxidase
PMCDCCLF_00302 1.1e-54 ypaA S Protein of unknown function (DUF1304)
PMCDCCLF_00303 8.8e-95 yxkA S Phosphatidylethanolamine-binding protein
PMCDCCLF_00304 1.1e-231 flhF N Uncharacterized conserved protein (DUF2075)
PMCDCCLF_00305 1.6e-82 ywnA K Winged helix-turn-helix transcription repressor, HrcA DNA-binding
PMCDCCLF_00306 7.9e-79
PMCDCCLF_00307 1.4e-69 accB 2.3.1.12 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PMCDCCLF_00308 1e-173 rihC 3.2.2.1 F Nucleoside
PMCDCCLF_00309 3.3e-161 vdlC S Belongs to the short-chain dehydrogenases reductases (SDR) family
PMCDCCLF_00310 1.1e-77 3.1.26.4 L RNA-DNA hybrid ribonuclease activity
PMCDCCLF_00311 1.8e-276 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PMCDCCLF_00312 9.9e-180 proV E ABC transporter, ATP-binding protein
PMCDCCLF_00313 7.5e-255 gshR 1.8.1.7 C Glutathione reductase
PMCDCCLF_00314 1.3e-300 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PMCDCCLF_00315 0.0 glpD 1.1.3.21, 1.1.5.3 C C-terminal domain of alpha-glycerophosphate oxidase
PMCDCCLF_00316 4.7e-134 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PMCDCCLF_00317 0.0 M domain protein
PMCDCCLF_00318 6.1e-31 M dTDP-4-dehydrorhamnose reductase activity
PMCDCCLF_00319 1.4e-175
PMCDCCLF_00320 6.5e-33
PMCDCCLF_00321 1.7e-39
PMCDCCLF_00322 1.2e-64
PMCDCCLF_00323 5.6e-68 S Immunity protein 63
PMCDCCLF_00324 1.1e-13 L LXG domain of WXG superfamily
PMCDCCLF_00325 2.4e-38
PMCDCCLF_00326 9.6e-120 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PMCDCCLF_00327 4.8e-197 uhpT EGP Major facilitator Superfamily
PMCDCCLF_00328 6.9e-147 3.1.3.102, 3.1.3.104 G Sucrose-6F-phosphate phosphohydrolase
PMCDCCLF_00329 3.3e-166 K Transcriptional regulator
PMCDCCLF_00330 2e-149 S hydrolase
PMCDCCLF_00331 3.2e-256 brnQ U Component of the transport system for branched-chain amino acids
PMCDCCLF_00332 6.1e-208 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PMCDCCLF_00334 7.2e-32
PMCDCCLF_00335 2.9e-17 plnR
PMCDCCLF_00336 1.7e-117
PMCDCCLF_00337 5.2e-23 plnK
PMCDCCLF_00338 3.5e-24 plnJ
PMCDCCLF_00339 2.8e-28
PMCDCCLF_00341 3.9e-226 M Glycosyl transferase family 2
PMCDCCLF_00342 7e-117 plnP S CAAX protease self-immunity
PMCDCCLF_00343 8.4e-27
PMCDCCLF_00344 1e-235 plnB 2.7.13.3 T GHKL domain
PMCDCCLF_00345 9.1e-133 plnC K LytTr DNA-binding domain
PMCDCCLF_00346 3.7e-134 plnD K LytTr DNA-binding domain
PMCDCCLF_00347 2.2e-129 S CAAX protease self-immunity
PMCDCCLF_00348 2.4e-22 plnF
PMCDCCLF_00349 6.7e-23
PMCDCCLF_00350 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PMCDCCLF_00351 1.4e-243 mesE M Transport protein ComB
PMCDCCLF_00352 5.5e-95 S CAAX protease self-immunity
PMCDCCLF_00353 1.6e-120 ypbD S CAAX protease self-immunity
PMCDCCLF_00354 1.4e-111 V CAAX protease self-immunity
PMCDCCLF_00355 1e-114 S CAAX protease self-immunity
PMCDCCLF_00356 2.6e-29
PMCDCCLF_00357 0.0 helD 3.6.4.12 L DNA helicase
PMCDCCLF_00358 1.2e-140 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
PMCDCCLF_00359 2.6e-191 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PMCDCCLF_00360 9e-130 K UbiC transcription regulator-associated domain protein
PMCDCCLF_00361 1.9e-253 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMCDCCLF_00362 3.9e-24
PMCDCCLF_00363 2.6e-76 S Domain of unknown function (DUF3284)
PMCDCCLF_00364 1.5e-250 chbC G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMCDCCLF_00365 7.3e-296 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PMCDCCLF_00366 1e-162 GK ROK family
PMCDCCLF_00367 4.1e-133 K Helix-turn-helix domain, rpiR family
PMCDCCLF_00368 8.1e-191 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PMCDCCLF_00369 1.1e-206
PMCDCCLF_00370 3.5e-151 S Psort location Cytoplasmic, score
PMCDCCLF_00371 8.2e-168 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PMCDCCLF_00372 4e-229 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PMCDCCLF_00373 3.1e-178
PMCDCCLF_00374 8.6e-133 cobB K SIR2 family
PMCDCCLF_00375 7.6e-160 yunF F Protein of unknown function DUF72
PMCDCCLF_00376 1.2e-70 mutT 3.6.1.55 F DNA mismatch repair protein MutT
PMCDCCLF_00377 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PMCDCCLF_00378 2e-211 bcr1 EGP Major facilitator Superfamily
PMCDCCLF_00379 5.7e-146 tatD L hydrolase, TatD family
PMCDCCLF_00380 4.7e-97 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PMCDCCLF_00381 8e-160 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PMCDCCLF_00382 3.2e-37 veg S Biofilm formation stimulator VEG
PMCDCCLF_00383 5.7e-163 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PMCDCCLF_00384 1.3e-181 S Prolyl oligopeptidase family
PMCDCCLF_00385 9.8e-129 fhuC 3.6.3.35 P ABC transporter
PMCDCCLF_00386 9.2e-131 znuB U ABC 3 transport family
PMCDCCLF_00387 6.4e-43 ankB S ankyrin repeats
PMCDCCLF_00388 2.1e-31
PMCDCCLF_00389 1.5e-147 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
PMCDCCLF_00390 1.2e-207 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PMCDCCLF_00391 1.8e-150 bla1 3.5.2.6 V Beta-lactamase enzyme family
PMCDCCLF_00392 1.2e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PMCDCCLF_00393 2.4e-184 S DUF218 domain
PMCDCCLF_00394 4.1e-125
PMCDCCLF_00395 1.1e-147 yxeH S hydrolase
PMCDCCLF_00396 2.6e-263 ywfO S HD domain protein
PMCDCCLF_00397 4.8e-154 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
PMCDCCLF_00398 3.8e-78 ywiB S Domain of unknown function (DUF1934)
PMCDCCLF_00399 4e-46 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PMCDCCLF_00400 3.4e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PMCDCCLF_00401 4.7e-246 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PMCDCCLF_00402 3.1e-229 tdcC E amino acid
PMCDCCLF_00403 9.8e-123 sdaAB 4.3.1.17 E Serine dehydratase beta chain
PMCDCCLF_00404 7.6e-158 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PMCDCCLF_00405 1.1e-130 S YheO-like PAS domain
PMCDCCLF_00406 5.1e-27
PMCDCCLF_00407 3.6e-238 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PMCDCCLF_00408 3e-240 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PMCDCCLF_00409 7.8e-41 rpmE2 J Ribosomal protein L31
PMCDCCLF_00410 2.7e-213 J translation release factor activity
PMCDCCLF_00411 9.2e-127 srtA 3.4.22.70 M sortase family
PMCDCCLF_00412 1.7e-91 lemA S LemA family
PMCDCCLF_00413 2.1e-139 htpX O Belongs to the peptidase M48B family
PMCDCCLF_00414 2e-146
PMCDCCLF_00415 1.6e-260 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PMCDCCLF_00416 6.6e-258 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PMCDCCLF_00417 1e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PMCDCCLF_00418 1.7e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PMCDCCLF_00419 1.6e-64 ndoA L Toxic component of a toxin-antitoxin (TA) module
PMCDCCLF_00420 0.0 kup P Transport of potassium into the cell
PMCDCCLF_00421 2.9e-193 P ABC transporter, substratebinding protein
PMCDCCLF_00422 6.3e-129 ssuC2 U Binding-protein-dependent transport system inner membrane component
PMCDCCLF_00423 5e-134 P ATPases associated with a variety of cellular activities
PMCDCCLF_00424 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PMCDCCLF_00425 6.3e-204 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PMCDCCLF_00426 3e-187 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PMCDCCLF_00427 2e-230 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PMCDCCLF_00428 9.4e-130 argB 2.7.2.8 F Belongs to the acetylglutamate kinase family. ArgB subfamily
PMCDCCLF_00429 9.3e-217 argD 2.6.1.11, 2.6.1.17 E acetylornithine
PMCDCCLF_00430 9.4e-189 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PMCDCCLF_00431 4.1e-84 S QueT transporter
PMCDCCLF_00432 2.1e-114 S (CBS) domain
PMCDCCLF_00433 6.4e-265 S Putative peptidoglycan binding domain
PMCDCCLF_00434 3.5e-177 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PMCDCCLF_00435 1.5e-100 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PMCDCCLF_00436 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PMCDCCLF_00437 3.3e-289 yabM S Polysaccharide biosynthesis protein
PMCDCCLF_00438 2.2e-42 yabO J S4 domain protein
PMCDCCLF_00440 1.1e-63 divIC D Septum formation initiator
PMCDCCLF_00441 3.1e-74 yabR J RNA binding
PMCDCCLF_00442 4.9e-254 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PMCDCCLF_00443 1.7e-96 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PMCDCCLF_00444 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PMCDCCLF_00445 1.2e-163 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PMCDCCLF_00446 1.1e-189 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PMCDCCLF_00447 3e-292 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PMCDCCLF_00450 1.5e-42 S COG NOG38524 non supervised orthologous group
PMCDCCLF_00453 3e-252 dtpT U amino acid peptide transporter
PMCDCCLF_00454 2e-151 yjjH S Calcineurin-like phosphoesterase
PMCDCCLF_00458 1.2e-49 5.3.3.19 S Cupin 2, conserved barrel domain protein
PMCDCCLF_00459 2.5e-53 S Cupin domain
PMCDCCLF_00460 4.6e-165 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
PMCDCCLF_00461 4.7e-194 ybiR P Citrate transporter
PMCDCCLF_00462 1.6e-151 pnuC H nicotinamide mononucleotide transporter
PMCDCCLF_00463 1.7e-137 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PMCDCCLF_00464 1e-220 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PMCDCCLF_00465 1.6e-123 gntR1 K UbiC transcription regulator-associated domain protein
PMCDCCLF_00466 4.6e-137 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PMCDCCLF_00467 5.2e-289 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PMCDCCLF_00468 4.7e-154 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PMCDCCLF_00469 0.0 pacL 3.6.3.8 P P-type ATPase
PMCDCCLF_00470 8.9e-72
PMCDCCLF_00471 0.0 yhgF K Tex-like protein N-terminal domain protein
PMCDCCLF_00472 5.2e-83 ydcK S Belongs to the SprT family
PMCDCCLF_00473 4e-237 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
PMCDCCLF_00474 1.6e-157 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PMCDCCLF_00476 6.4e-156 G Peptidase_C39 like family
PMCDCCLF_00477 1.3e-168 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PMCDCCLF_00478 3.4e-133 manY G PTS system
PMCDCCLF_00479 3.6e-171 manN G system, mannose fructose sorbose family IID component
PMCDCCLF_00480 4.7e-64 S Domain of unknown function (DUF956)
PMCDCCLF_00481 0.0 levR K Sigma-54 interaction domain
PMCDCCLF_00482 8.6e-72 pts10A 2.7.1.191 G PTS system fructose IIA component
PMCDCCLF_00483 3.1e-87 pts10B 2.7.1.191, 2.7.1.202 G PTS system sorbose subfamily IIB component
PMCDCCLF_00484 5.4e-178 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PMCDCCLF_00485 1.7e-64 accB 2.3.1.12 I Biotin-requiring enzyme
PMCDCCLF_00486 3.4e-247 accC2 6.3.4.14, 6.4.1.2 I Biotin carboxylase C-terminal domain
PMCDCCLF_00487 9.8e-141 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PMCDCCLF_00488 1.8e-136 accA 2.1.3.15, 6.4.1.2 I Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
PMCDCCLF_00489 1.8e-167 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PMCDCCLF_00490 3.3e-167 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
PMCDCCLF_00491 1.7e-177 EG EamA-like transporter family
PMCDCCLF_00492 2.5e-129 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PMCDCCLF_00493 1.8e-113 zmp2 O Zinc-dependent metalloprotease
PMCDCCLF_00494 7.3e-258 pepC 3.4.22.40 E Peptidase C1-like family
PMCDCCLF_00495 3.2e-124 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PMCDCCLF_00496 1.2e-51 HA62_12640 S GCN5-related N-acetyl-transferase
PMCDCCLF_00497 3.6e-99 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
PMCDCCLF_00498 1.3e-257 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PMCDCCLF_00499 3.7e-205 yacL S domain protein
PMCDCCLF_00500 8.9e-289 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PMCDCCLF_00501 6.7e-270 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PMCDCCLF_00502 3.5e-70 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PMCDCCLF_00503 3.3e-138 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PMCDCCLF_00504 5.3e-98 yacP S YacP-like NYN domain
PMCDCCLF_00505 2.4e-101 sigH K Sigma-70 region 2
PMCDCCLF_00506 6.5e-22 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PMCDCCLF_00507 6.8e-29 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PMCDCCLF_00508 3.7e-99 nusG K Participates in transcription elongation, termination and antitermination
PMCDCCLF_00509 2.6e-158 S Alpha/beta hydrolase of unknown function (DUF915)
PMCDCCLF_00510 2.4e-69 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PMCDCCLF_00511 5.1e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PMCDCCLF_00512 4.6e-80 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PMCDCCLF_00513 9.9e-56 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PMCDCCLF_00514 9.3e-178 F DNA/RNA non-specific endonuclease
PMCDCCLF_00515 9e-39 L nuclease
PMCDCCLF_00516 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PMCDCCLF_00517 4.6e-108 yvdD 3.2.2.10 S Belongs to the LOG family
PMCDCCLF_00518 2.2e-198 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PMCDCCLF_00519 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PMCDCCLF_00520 6.5e-37 nrdH O Glutaredoxin
PMCDCCLF_00521 3.4e-109 rsmC 2.1.1.172 J Methyltransferase
PMCDCCLF_00522 5.9e-91 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PMCDCCLF_00523 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PMCDCCLF_00524 5.8e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PMCDCCLF_00525 7.4e-109 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PMCDCCLF_00526 2.2e-38 yaaL S Protein of unknown function (DUF2508)
PMCDCCLF_00527 1.6e-240 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PMCDCCLF_00528 1.1e-50 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PMCDCCLF_00529 1.1e-40 ulaB_1 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
PMCDCCLF_00530 2e-220 ulaA 2.7.1.194 S PTS system sugar-specific permease component
PMCDCCLF_00531 2.5e-99 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
PMCDCCLF_00532 3.3e-118 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PMCDCCLF_00533 2.4e-53 yaaQ S Cyclic-di-AMP receptor
PMCDCCLF_00534 3.3e-186 holB 2.7.7.7 L DNA polymerase III
PMCDCCLF_00535 1e-57 yabA L Involved in initiation control of chromosome replication
PMCDCCLF_00536 1.1e-164 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PMCDCCLF_00537 2.1e-148 fat 3.1.2.21 I Acyl-ACP thioesterase
PMCDCCLF_00538 4e-192 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PMCDCCLF_00539 5.5e-211 phnW 2.5.1.49, 2.6.1.37, 3.11.1.1 E Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily
PMCDCCLF_00540 3.2e-144 phnX 2.6.1.37, 3.1.3.18, 3.11.1.1 E Belongs to the HAD-like hydrolase superfamily. PhnX family
PMCDCCLF_00541 5.9e-144 phnE1 3.6.1.63 U ABC transporter permease
PMCDCCLF_00542 7.7e-138 phnE 3.6.1.63 U Phosphonate ABC transporter permease
PMCDCCLF_00543 3.7e-137 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PMCDCCLF_00544 1.9e-189 phnD P Phosphonate ABC transporter
PMCDCCLF_00545 1.7e-128 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PMCDCCLF_00546 6.7e-101 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PMCDCCLF_00547 1e-81 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PMCDCCLF_00548 1.5e-194 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PMCDCCLF_00549 7.4e-307 uup S ABC transporter, ATP-binding protein
PMCDCCLF_00550 1.4e-119 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PMCDCCLF_00551 6.1e-109 ydiL S CAAX protease self-immunity
PMCDCCLF_00552 1e-31 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PMCDCCLF_00553 8.5e-293 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PMCDCCLF_00554 0.0 ydaO E amino acid
PMCDCCLF_00555 2.7e-181 tagO 2.7.8.33, 2.7.8.35 M transferase
PMCDCCLF_00556 2.8e-144 pstS P Phosphate
PMCDCCLF_00557 1.7e-114 yvyE 3.4.13.9 S YigZ family
PMCDCCLF_00558 7.4e-258 comFA L Helicase C-terminal domain protein
PMCDCCLF_00559 3.2e-71 tnp2PF3 L manually curated
PMCDCCLF_00560 5.6e-109 comFC S Competence protein
PMCDCCLF_00561 3.5e-100 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PMCDCCLF_00562 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PMCDCCLF_00563 3.2e-203 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PMCDCCLF_00564 1.2e-216 minJ O Domain present in PSD-95, Dlg, and ZO-1/2.
PMCDCCLF_00565 1.5e-132 K response regulator
PMCDCCLF_00566 3.5e-250 phoR 2.7.13.3 T Histidine kinase
PMCDCCLF_00567 3e-151 pstS P Phosphate
PMCDCCLF_00568 1.5e-161 pstC P probably responsible for the translocation of the substrate across the membrane
PMCDCCLF_00569 1.5e-155 pstA P Phosphate transport system permease protein PstA
PMCDCCLF_00570 1.1e-147 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PMCDCCLF_00571 1e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PMCDCCLF_00572 8.3e-117 phoU P Plays a role in the regulation of phosphate uptake
PMCDCCLF_00573 2e-49 pspC KT positive regulation of macromolecule biosynthetic process
PMCDCCLF_00574 9.2e-54 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
PMCDCCLF_00575 1.4e-176 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PMCDCCLF_00576 1.9e-163 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PMCDCCLF_00577 8.5e-182 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PMCDCCLF_00578 2.1e-171 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PMCDCCLF_00579 1.9e-124 yliE T Putative diguanylate phosphodiesterase
PMCDCCLF_00580 3.3e-269 nox C NADH oxidase
PMCDCCLF_00581 1.6e-162 G Belongs to the glycosyl hydrolase 8 (cellulase D) family
PMCDCCLF_00582 1e-244
PMCDCCLF_00583 1.9e-204 S Protein conserved in bacteria
PMCDCCLF_00584 6.8e-218 ydaM M Glycosyl transferase family group 2
PMCDCCLF_00585 0.0 ydaN S Bacterial cellulose synthase subunit
PMCDCCLF_00586 1e-132 2.7.7.65 T diguanylate cyclase activity
PMCDCCLF_00587 1.7e-176 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PMCDCCLF_00588 2e-109 yviA S Protein of unknown function (DUF421)
PMCDCCLF_00589 1.1e-61 S Protein of unknown function (DUF3290)
PMCDCCLF_00590 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PMCDCCLF_00591 3.3e-132 yliE T Putative diguanylate phosphodiesterase
PMCDCCLF_00592 1.4e-259 nox S Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PMCDCCLF_00593 1.1e-103 ddpX 3.4.13.22 E Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
PMCDCCLF_00594 9.2e-212 norA EGP Major facilitator Superfamily
PMCDCCLF_00595 1.2e-117 yfbR S HD containing hydrolase-like enzyme
PMCDCCLF_00596 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PMCDCCLF_00597 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PMCDCCLF_00598 6.7e-89 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PMCDCCLF_00599 1.8e-231 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PMCDCCLF_00600 7.2e-264 argH 4.3.2.1 E argininosuccinate lyase
PMCDCCLF_00601 9.3e-87 S Short repeat of unknown function (DUF308)
PMCDCCLF_00602 1.1e-161 rapZ S Displays ATPase and GTPase activities
PMCDCCLF_00603 2.9e-190 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PMCDCCLF_00604 3.7e-168 whiA K May be required for sporulation
PMCDCCLF_00605 2.6e-305 oppA E ABC transporter, substratebinding protein
PMCDCCLF_00606 3.9e-176 1.1.1.26 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMCDCCLF_00607 3e-102 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PMCDCCLF_00609 4.2e-245 rpoN K Sigma-54 factor, core binding domain
PMCDCCLF_00610 7.3e-189 cggR K Putative sugar-binding domain
PMCDCCLF_00611 2.6e-191 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PMCDCCLF_00612 8.1e-224 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PMCDCCLF_00613 1.2e-137 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PMCDCCLF_00614 1.6e-249 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PMCDCCLF_00615 1.3e-133
PMCDCCLF_00616 4.3e-294 clcA P chloride
PMCDCCLF_00617 1.2e-30 secG U Preprotein translocase
PMCDCCLF_00618 1.3e-139 est 3.1.1.1 S Serine aminopeptidase, S33
PMCDCCLF_00619 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PMCDCCLF_00620 9.3e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PMCDCCLF_00621 0.0 3.4.21.72 M Bacterial Ig-like domain (group 3)
PMCDCCLF_00622 1.5e-256 glnP P ABC transporter
PMCDCCLF_00623 1.2e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PMCDCCLF_00624 6.1e-105 yxjI
PMCDCCLF_00625 4.4e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
PMCDCCLF_00626 6.3e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PMCDCCLF_00627 1.4e-178 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PMCDCCLF_00628 5e-81 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PMCDCCLF_00629 8.1e-88 2.3.1.128, 2.3.1.178 J Acetyltransferase (GNAT) domain
PMCDCCLF_00630 5.6e-100 dnaQ 2.7.7.7 L DNA polymerase III
PMCDCCLF_00631 2.8e-153 xth 3.1.11.2 L exodeoxyribonuclease III
PMCDCCLF_00632 3.9e-162 yceM 1.1.1.18, 1.1.1.369 S Oxidoreductase family, NAD-binding Rossmann fold
PMCDCCLF_00633 6.2e-168 murB 1.3.1.98 M Cell wall formation
PMCDCCLF_00634 0.0 yjcE P Sodium proton antiporter
PMCDCCLF_00635 1.3e-90 K helix_turn_helix multiple antibiotic resistance protein
PMCDCCLF_00636 1.8e-119 S Protein of unknown function (DUF1361)
PMCDCCLF_00637 2.7e-149 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PMCDCCLF_00638 1.6e-129 ybbR S YbbR-like protein
PMCDCCLF_00639 7.9e-252 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PMCDCCLF_00640 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PMCDCCLF_00641 1.3e-122 yliE T EAL domain
PMCDCCLF_00642 6.4e-148 3.1.3.23 S Sucrose-6F-phosphate phosphohydrolase
PMCDCCLF_00643 7e-104 K Bacterial regulatory proteins, tetR family
PMCDCCLF_00644 1.3e-206 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PMCDCCLF_00645 1.5e-52
PMCDCCLF_00646 3e-72
PMCDCCLF_00647 3e-131 1.5.1.39 C nitroreductase
PMCDCCLF_00648 9.2e-139 EGP Transmembrane secretion effector
PMCDCCLF_00649 1.2e-33 G Transmembrane secretion effector
PMCDCCLF_00650 2.2e-226 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PMCDCCLF_00651 1e-40 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PMCDCCLF_00652 2.5e-141
PMCDCCLF_00654 1.9e-71 spxA 1.20.4.1 P ArsC family
PMCDCCLF_00655 1.5e-33
PMCDCCLF_00656 1.1e-89 V VanZ like family
PMCDCCLF_00657 1.8e-241 EGP Major facilitator Superfamily
PMCDCCLF_00658 3.2e-175 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PMCDCCLF_00659 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PMCDCCLF_00660 1.8e-289 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PMCDCCLF_00661 5e-153 licD M LicD family
PMCDCCLF_00662 1.3e-82 K Transcriptional regulator
PMCDCCLF_00663 1.5e-19
PMCDCCLF_00664 1.2e-225 pbuG S permease
PMCDCCLF_00665 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PMCDCCLF_00666 1.8e-153 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PMCDCCLF_00667 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PMCDCCLF_00668 5.4e-180 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
PMCDCCLF_00669 7.7e-180 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PMCDCCLF_00670 0.0 oatA I Acyltransferase
PMCDCCLF_00671 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PMCDCCLF_00672 5e-69 O OsmC-like protein
PMCDCCLF_00673 5.8e-46
PMCDCCLF_00674 8.2e-252 yfnA E Amino Acid
PMCDCCLF_00675 2.5e-88
PMCDCCLF_00676 9.9e-149 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PMCDCCLF_00677 1.7e-72 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
PMCDCCLF_00678 1.8e-19
PMCDCCLF_00679 6.3e-105 gmk2 2.7.4.8 F Guanylate kinase
PMCDCCLF_00680 1.3e-81 zur P Belongs to the Fur family
PMCDCCLF_00681 7.1e-12 3.2.1.14 GH18
PMCDCCLF_00682 4.9e-148
PMCDCCLF_00683 8.8e-113 gph 3.1.3.18 S HAD hydrolase, family IA, variant
PMCDCCLF_00684 1.1e-209 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
PMCDCCLF_00685 3.3e-170 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMCDCCLF_00686 3.6e-41
PMCDCCLF_00688 9e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PMCDCCLF_00689 7.8e-149 glnH ET ABC transporter substrate-binding protein
PMCDCCLF_00690 1.3e-108 gluC P ABC transporter permease
PMCDCCLF_00691 6.8e-108 glnP P ABC transporter permease
PMCDCCLF_00692 2.6e-83 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PMCDCCLF_00693 2.4e-153 K CAT RNA binding domain
PMCDCCLF_00694 1e-257 2.7.1.193, 2.7.1.211 G phosphotransferase system, EIIB
PMCDCCLF_00695 5.1e-139 G YdjC-like protein
PMCDCCLF_00696 2.4e-245 steT E amino acid
PMCDCCLF_00697 1.1e-67 mgrA K helix_turn_helix multiple antibiotic resistance protein
PMCDCCLF_00698 3.7e-149 XK27_00825 S Sulfite exporter TauE/SafE
PMCDCCLF_00699 2e-71 K MarR family
PMCDCCLF_00700 8.3e-210 EGP Major facilitator Superfamily
PMCDCCLF_00701 3.8e-85 S membrane transporter protein
PMCDCCLF_00702 7.1e-98 K Bacterial regulatory proteins, tetR family
PMCDCCLF_00703 8.7e-232 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PMCDCCLF_00704 6.4e-78 3.6.1.55 F NUDIX domain
PMCDCCLF_00705 1.3e-48 sugE U Multidrug resistance protein
PMCDCCLF_00706 1.2e-26
PMCDCCLF_00707 5.5e-129 pgm3 G Phosphoglycerate mutase family
PMCDCCLF_00708 4.7e-125 pgm3 G Phosphoglycerate mutase family
PMCDCCLF_00709 0.0 yjbQ P TrkA C-terminal domain protein
PMCDCCLF_00710 3.1e-178 yqkA 3.6.1.55 F Belongs to the Nudix hydrolase family
PMCDCCLF_00711 7.7e-112 dedA S SNARE associated Golgi protein
PMCDCCLF_00712 0.0 helD 3.6.4.12 L DNA helicase
PMCDCCLF_00713 1.7e-165 fabK 1.3.1.9 S Nitronate monooxygenase
PMCDCCLF_00714 2.5e-177 coaA 2.7.1.33 F Pantothenic acid kinase
PMCDCCLF_00715 8.7e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PMCDCCLF_00717 5.1e-143 spoVK O ATPase family associated with various cellular activities (AAA)
PMCDCCLF_00719 9.8e-39 L Transposase and inactivated derivatives
PMCDCCLF_00720 1.9e-155 L COG2801 Transposase and inactivated derivatives
PMCDCCLF_00722 7.6e-46 L Helix-turn-helix domain
PMCDCCLF_00723 2e-18 L hmm pf00665
PMCDCCLF_00724 6.9e-29 L hmm pf00665
PMCDCCLF_00725 8.9e-23 L hmm pf00665
PMCDCCLF_00726 3.1e-60
PMCDCCLF_00727 6.2e-50
PMCDCCLF_00728 1.7e-63 K Helix-turn-helix XRE-family like proteins
PMCDCCLF_00729 2e-110 XK27_07075 V CAAX protease self-immunity
PMCDCCLF_00730 4.2e-56 hxlR K HxlR-like helix-turn-helix
PMCDCCLF_00731 7.1e-234 EGP Major facilitator Superfamily
PMCDCCLF_00732 6.7e-164 S Cysteine-rich secretory protein family
PMCDCCLF_00733 7.4e-38 S MORN repeat
PMCDCCLF_00734 0.0 XK27_09800 I Acyltransferase family
PMCDCCLF_00735 7.1e-37 S Transglycosylase associated protein
PMCDCCLF_00736 2.6e-84
PMCDCCLF_00737 7.2e-23
PMCDCCLF_00738 8.7e-72 asp S Asp23 family, cell envelope-related function
PMCDCCLF_00739 5.3e-72 asp2 S Asp23 family, cell envelope-related function
PMCDCCLF_00740 7e-147 Q Fumarylacetoacetate (FAA) hydrolase family
PMCDCCLF_00741 1e-155 yjdB S Domain of unknown function (DUF4767)
PMCDCCLF_00742 3.4e-47 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
PMCDCCLF_00743 4.1e-101 G Glycogen debranching enzyme
PMCDCCLF_00744 0.0 pepN 3.4.11.2 E aminopeptidase
PMCDCCLF_00745 0.0 N Uncharacterized conserved protein (DUF2075)
PMCDCCLF_00746 2.6e-44 S MazG-like family
PMCDCCLF_00747 3e-90 XK27_09665 5.4.2.11 G Phosphoglycerate mutase family
PMCDCCLF_00748 0.0 nagH 2.7.13.3, 3.2.1.4, 3.2.1.52, 3.2.1.78, 3.2.1.8 GH20,GH26,GH5,GH9 M MucBP domain
PMCDCCLF_00750 1.2e-85 S AAA domain
PMCDCCLF_00751 2.9e-139 K sequence-specific DNA binding
PMCDCCLF_00752 2.5e-47 K Helix-turn-helix domain
PMCDCCLF_00753 5.2e-41 K Helix-turn-helix domain
PMCDCCLF_00754 1.2e-126 K Transcriptional regulator
PMCDCCLF_00755 1.1e-30 K Transcriptional regulator
PMCDCCLF_00756 0.0 1.3.5.4 C FMN_bind
PMCDCCLF_00758 2.3e-81 rmaD K Transcriptional regulator
PMCDCCLF_00759 4.2e-115 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PMCDCCLF_00760 2.8e-254 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PMCDCCLF_00761 9.9e-199 asnA 6.3.1.1 F aspartate--ammonia ligase
PMCDCCLF_00762 6.7e-278 pipD E Dipeptidase
PMCDCCLF_00763 1.7e-221 2.7.7.7, 3.6.4.12 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
PMCDCCLF_00764 1e-41
PMCDCCLF_00765 4.1e-32 L leucine-zipper of insertion element IS481
PMCDCCLF_00766 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PMCDCCLF_00767 1.4e-161 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PMCDCCLF_00768 1.5e-50 K helix_turn_helix, Arsenical Resistance Operon Repressor
PMCDCCLF_00769 5.6e-138 S NADPH-dependent FMN reductase
PMCDCCLF_00770 2.3e-179
PMCDCCLF_00771 3.7e-219 yibE S overlaps another CDS with the same product name
PMCDCCLF_00772 1.3e-126 yibF S overlaps another CDS with the same product name
PMCDCCLF_00773 7e-101 3.2.2.20 K FR47-like protein
PMCDCCLF_00774 5e-122 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PMCDCCLF_00775 5.6e-49
PMCDCCLF_00776 9e-192 nlhH_1 I alpha/beta hydrolase fold
PMCDCCLF_00777 6.1e-255 xylP2 G symporter
PMCDCCLF_00778 1.5e-280 murE 6.3.2.10, 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PMCDCCLF_00779 1.6e-219 dapG 1.1.1.3, 2.7.2.4 E Amino acid kinase family
PMCDCCLF_00780 0.0 asnB 6.3.5.4 E Asparagine synthase
PMCDCCLF_00781 7.2e-50 azlD S Branched-chain amino acid transport protein (AzlD)
PMCDCCLF_00782 1.3e-120 azlC E branched-chain amino acid
PMCDCCLF_00783 4.4e-35 yyaN K MerR HTH family regulatory protein
PMCDCCLF_00784 2.7e-104
PMCDCCLF_00785 1.4e-117 S Domain of unknown function (DUF4811)
PMCDCCLF_00786 7e-270 lmrB EGP Major facilitator Superfamily
PMCDCCLF_00787 1.7e-84 merR K MerR HTH family regulatory protein
PMCDCCLF_00788 2.6e-58
PMCDCCLF_00789 2e-120 sirR K iron dependent repressor
PMCDCCLF_00790 6e-31 cspC K Cold shock protein
PMCDCCLF_00791 1.5e-130 thrE S Putative threonine/serine exporter
PMCDCCLF_00792 2.2e-76 S Threonine/Serine exporter, ThrE
PMCDCCLF_00793 1.5e-189 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PMCDCCLF_00794 2.3e-119 lssY 3.6.1.27 I phosphatase
PMCDCCLF_00795 4.5e-154 I alpha/beta hydrolase fold
PMCDCCLF_00796 2.8e-99 2.3.1.128 J Acetyltransferase (GNAT) domain
PMCDCCLF_00797 4.2e-92 K Transcriptional regulator
PMCDCCLF_00798 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
PMCDCCLF_00799 4.7e-172 lysP E amino acid
PMCDCCLF_00800 1.4e-74 lysP E amino acid
PMCDCCLF_00801 2.5e-114 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
PMCDCCLF_00802 2.5e-115 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PMCDCCLF_00803 4.1e-218 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PMCDCCLF_00811 6.9e-78 ctsR K Belongs to the CtsR family
PMCDCCLF_00812 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PMCDCCLF_00813 1.5e-109 K Bacterial regulatory proteins, tetR family
PMCDCCLF_00814 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PMCDCCLF_00815 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PMCDCCLF_00816 6.6e-114 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
PMCDCCLF_00817 3.6e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PMCDCCLF_00818 5.5e-83 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PMCDCCLF_00819 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PMCDCCLF_00820 2.6e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PMCDCCLF_00821 4.4e-112 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PMCDCCLF_00822 5.5e-107 rplD J Forms part of the polypeptide exit tunnel
PMCDCCLF_00823 1.8e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PMCDCCLF_00824 8.1e-146 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PMCDCCLF_00825 8.2e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PMCDCCLF_00826 2.8e-52 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PMCDCCLF_00827 2.1e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PMCDCCLF_00828 9.2e-77 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PMCDCCLF_00829 1.4e-24 rpmC J Belongs to the universal ribosomal protein uL29 family
PMCDCCLF_00830 2.5e-40 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PMCDCCLF_00831 4.3e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PMCDCCLF_00832 2.4e-50 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PMCDCCLF_00833 3.2e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PMCDCCLF_00834 1e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PMCDCCLF_00835 3.5e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PMCDCCLF_00836 3.3e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PMCDCCLF_00837 6.8e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PMCDCCLF_00838 2.2e-24 rpmD J Ribosomal protein L30
PMCDCCLF_00839 6.3e-70 rplO J Binds to the 23S rRNA
PMCDCCLF_00840 1.5e-236 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PMCDCCLF_00841 6.2e-125 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PMCDCCLF_00842 3.1e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PMCDCCLF_00843 1.1e-59 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PMCDCCLF_00844 3.4e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PMCDCCLF_00845 5.7e-172 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PMCDCCLF_00846 2.1e-61 rplQ J Ribosomal protein L17
PMCDCCLF_00847 1.4e-181 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PMCDCCLF_00848 1.7e-94 gerCA 2.5.1.30 S Heptaprenyl diphosphate synthase component I
PMCDCCLF_00849 1.4e-86 ynhH S NusG domain II
PMCDCCLF_00850 0.0 ndh 1.6.99.3 C NADH dehydrogenase
PMCDCCLF_00851 3.5e-142 cad S FMN_bind
PMCDCCLF_00852 1.5e-208 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PMCDCCLF_00853 4.7e-154 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PMCDCCLF_00854 2.2e-165 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PMCDCCLF_00855 5e-145 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PMCDCCLF_00856 3.9e-150 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PMCDCCLF_00857 1.3e-78 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PMCDCCLF_00858 1.9e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
PMCDCCLF_00859 2.3e-164 degV S Uncharacterised protein, DegV family COG1307
PMCDCCLF_00860 1.7e-183 ywhK S Membrane
PMCDCCLF_00861 1.2e-202 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
PMCDCCLF_00862 0.0 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PMCDCCLF_00863 1.2e-163 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PMCDCCLF_00864 4e-184 aroF 2.5.1.54 E DAHP synthetase I family
PMCDCCLF_00865 1.4e-195 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PMCDCCLF_00866 1.4e-262 P Sodium:sulfate symporter transmembrane region
PMCDCCLF_00867 9.1e-53 yitW S Iron-sulfur cluster assembly protein
PMCDCCLF_00868 5.4e-115 ttdB 4.2.1.2, 4.2.1.32 C Catalyzes the reversible hydration of fumarate to (S)- malate
PMCDCCLF_00869 4.4e-177 ttdA 4.2.1.32 C Fumarate hydratase (Fumerase)
PMCDCCLF_00870 7.7e-199 K Helix-turn-helix domain
PMCDCCLF_00871 6.8e-153 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PMCDCCLF_00872 4.5e-132 mntB 3.6.3.35 P ABC transporter
PMCDCCLF_00873 4.8e-141 mtsB U ABC 3 transport family
PMCDCCLF_00874 1.2e-174 sitA P Belongs to the bacterial solute-binding protein 9 family
PMCDCCLF_00875 3.1e-50
PMCDCCLF_00876 6e-166 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PMCDCCLF_00877 1.7e-260 citP P Sodium:sulfate symporter transmembrane region
PMCDCCLF_00878 2.9e-179 citR K sugar-binding domain protein
PMCDCCLF_00879 7.9e-208 mez_1 1.1.1.38 C Malic enzyme, NAD binding domain
PMCDCCLF_00880 9.7e-189 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PMCDCCLF_00881 9e-44 citD C Covalent carrier of the coenzyme of citrate lyase
PMCDCCLF_00882 5.5e-164 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
PMCDCCLF_00883 4.6e-288 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
PMCDCCLF_00884 1.3e-143 L PFAM Integrase, catalytic core
PMCDCCLF_00885 1.2e-25 K sequence-specific DNA binding
PMCDCCLF_00887 8.4e-17 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PMCDCCLF_00888 2.2e-182 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PMCDCCLF_00889 6.4e-257 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PMCDCCLF_00890 3.9e-262 frdC 1.3.5.4 C FAD binding domain
PMCDCCLF_00891 3.6e-94 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PMCDCCLF_00892 4.9e-162 mleR K LysR family transcriptional regulator
PMCDCCLF_00893 1.8e-167 mleR K LysR family
PMCDCCLF_00894 1.6e-307 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
PMCDCCLF_00895 1.4e-165 mleP S Sodium Bile acid symporter family
PMCDCCLF_00896 5.8e-253 yfnA E Amino Acid
PMCDCCLF_00897 3e-99 S ECF transporter, substrate-specific component
PMCDCCLF_00898 1.8e-23
PMCDCCLF_00899 2.5e-297 S Alpha beta
PMCDCCLF_00900 5.4e-275 cydA 1.10.3.14 C ubiquinol oxidase
PMCDCCLF_00901 2.6e-183 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
PMCDCCLF_00902 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PMCDCCLF_00903 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PMCDCCLF_00904 6.9e-157 ddpX 3.4.13.22 S L,D-transpeptidase catalytic domain
PMCDCCLF_00905 2.4e-182 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PMCDCCLF_00906 2.9e-165 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PMCDCCLF_00907 8.7e-184 S Oxidoreductase family, NAD-binding Rossmann fold
PMCDCCLF_00908 3.1e-113 acmA 3.2.1.17 NU mannosyl-glycoprotein
PMCDCCLF_00909 9.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PMCDCCLF_00910 8.8e-93 S UPF0316 protein
PMCDCCLF_00911 1.3e-218 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PMCDCCLF_00912 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PMCDCCLF_00913 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PMCDCCLF_00914 2.6e-198 camS S sex pheromone
PMCDCCLF_00915 3.2e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PMCDCCLF_00916 2.1e-274 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PMCDCCLF_00917 7.7e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PMCDCCLF_00918 1e-190 yegS 2.7.1.107 G Lipid kinase
PMCDCCLF_00919 1.5e-258 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PMCDCCLF_00920 3e-99 yobS K Bacterial regulatory proteins, tetR family
PMCDCCLF_00921 0.0 yfgQ P E1-E2 ATPase
PMCDCCLF_00922 7.5e-239 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMCDCCLF_00923 6.1e-168 S Alpha/beta hydrolase of unknown function (DUF915)
PMCDCCLF_00924 2.3e-151 gntR K rpiR family
PMCDCCLF_00925 1.1e-144 lys M Glycosyl hydrolases family 25
PMCDCCLF_00926 1.1e-62 S Domain of unknown function (DUF4828)
PMCDCCLF_00927 2.7e-31 cspA K 'Cold-shock' DNA-binding domain
PMCDCCLF_00928 8.4e-190 mocA S Oxidoreductase
PMCDCCLF_00929 2.6e-239 yfmL 3.6.4.13 L DEAD DEAH box helicase
PMCDCCLF_00931 2.3e-75 T Universal stress protein family
PMCDCCLF_00932 1.4e-245 pts14C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMCDCCLF_00933 1.8e-164 S Alpha/beta hydrolase of unknown function (DUF915)
PMCDCCLF_00935 1.3e-73
PMCDCCLF_00936 5e-107
PMCDCCLF_00937 1.2e-255 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
PMCDCCLF_00938 2.9e-218 pbpX1 V Beta-lactamase
PMCDCCLF_00939 2.2e-207 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PMCDCCLF_00940 1.4e-154 yihY S Belongs to the UPF0761 family
PMCDCCLF_00941 9.7e-132 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PMCDCCLF_00942 5.6e-85 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PMCDCCLF_00943 4e-43 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PMCDCCLF_00944 1.2e-158 L Transposase
PMCDCCLF_00945 3.6e-122 L Transposase
PMCDCCLF_00946 9.8e-39 L Transposase and inactivated derivatives
PMCDCCLF_00947 1.9e-155 L COG2801 Transposase and inactivated derivatives
PMCDCCLF_00948 2.4e-53 K helix_turn_helix multiple antibiotic resistance protein
PMCDCCLF_00949 1.1e-259 rfbX S Membrane protein involved in the export of O-antigen and teichoic acid
PMCDCCLF_00950 3.2e-121 rfbP M Bacterial sugar transferase
PMCDCCLF_00951 3.8e-53
PMCDCCLF_00952 7.3e-33 S Protein of unknown function (DUF2922)
PMCDCCLF_00953 7e-30
PMCDCCLF_00954 1e-27
PMCDCCLF_00955 3e-101 K DNA-templated transcription, initiation
PMCDCCLF_00956 2.1e-126
PMCDCCLF_00957 2.2e-140 recX 2.4.1.337 GT4 S Regulatory protein RecX
PMCDCCLF_00958 4.1e-106 ygaC J Belongs to the UPF0374 family
PMCDCCLF_00959 1.5e-133 cwlO M NlpC/P60 family
PMCDCCLF_00960 7.8e-48 K sequence-specific DNA binding
PMCDCCLF_00961 1.3e-27 S Antitoxin component of a toxin-antitoxin (TA) module
PMCDCCLF_00962 5e-138 pbpX V Beta-lactamase
PMCDCCLF_00963 1.3e-17 pbpX V Beta-lactamase
PMCDCCLF_00964 9.8e-169 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PMCDCCLF_00965 9.3e-188 yueF S AI-2E family transporter
PMCDCCLF_00966 3.7e-72 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
PMCDCCLF_00967 9.5e-213 gntP EG Gluconate
PMCDCCLF_00968 4.6e-293 gntK 2.7.1.12, 2.7.1.16, 2.7.1.17, 2.7.1.5 G Belongs to the FGGY kinase family
PMCDCCLF_00969 1.1e-169 gnd 1.1.1.343, 1.1.1.44 G Dehydrogenase
PMCDCCLF_00970 3.4e-255 gor 1.8.1.7 C Glutathione reductase
PMCDCCLF_00971 6.9e-308 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PMCDCCLF_00972 3.8e-273
PMCDCCLF_00973 6.5e-198 M MucBP domain
PMCDCCLF_00974 7.1e-161 lysR5 K LysR substrate binding domain
PMCDCCLF_00975 5.5e-126 yxaA S membrane transporter protein
PMCDCCLF_00976 3.2e-57 ywjH S Protein of unknown function (DUF1634)
PMCDCCLF_00977 1.3e-309 oppA E ABC transporter, substratebinding protein
PMCDCCLF_00978 2.3e-165 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PMCDCCLF_00979 1.1e-189 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PMCDCCLF_00980 9.2e-203 oppD P Belongs to the ABC transporter superfamily
PMCDCCLF_00981 1.8e-181 oppF P Belongs to the ABC transporter superfamily
PMCDCCLF_00982 1e-63 K Winged helix DNA-binding domain
PMCDCCLF_00983 1.6e-102 L Integrase
PMCDCCLF_00984 0.0 clpE O Belongs to the ClpA ClpB family
PMCDCCLF_00985 6.5e-30
PMCDCCLF_00986 2.7e-39 ptsH G phosphocarrier protein HPR
PMCDCCLF_00987 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PMCDCCLF_00988 1.4e-223 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
PMCDCCLF_00989 6.9e-200 cpoA GT4 M Glycosyltransferase, group 1 family protein
PMCDCCLF_00990 7.4e-189 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PMCDCCLF_00991 1.2e-227 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PMCDCCLF_00992 1.8e-228 patA 2.6.1.1 E Aminotransferase
PMCDCCLF_00993 1.1e-34 ykuJ S Protein of unknown function (DUF1797)
PMCDCCLF_00994 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PMCDCCLF_00997 1.5e-42 S COG NOG38524 non supervised orthologous group
PMCDCCLF_01003 5.1e-08
PMCDCCLF_01009 1.4e-90 apt 2.4.2.22, 2.4.2.7 F Phosphoribosyl transferase domain
PMCDCCLF_01010 1.8e-182 P secondary active sulfate transmembrane transporter activity
PMCDCCLF_01011 5.8e-94
PMCDCCLF_01012 9.9e-94 K Acetyltransferase (GNAT) domain
PMCDCCLF_01013 1.1e-155 T Calcineurin-like phosphoesterase superfamily domain
PMCDCCLF_01015 5.2e-232 mntH P H( )-stimulated, divalent metal cation uptake system
PMCDCCLF_01016 7.6e-188 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
PMCDCCLF_01017 1.7e-254 mmuP E amino acid
PMCDCCLF_01018 1.7e-168 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PMCDCCLF_01019 9.3e-294 tagE1 2.4.1.52 GT4 M Glycosyl transferases group 1
PMCDCCLF_01020 3.1e-122
PMCDCCLF_01021 4.1e-212 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PMCDCCLF_01022 1.4e-278 bmr3 EGP Major facilitator Superfamily
PMCDCCLF_01023 1.5e-20 N Cell shape-determining protein MreB
PMCDCCLF_01025 5.8e-140 N Cell shape-determining protein MreB
PMCDCCLF_01026 0.0 S Pfam Methyltransferase
PMCDCCLF_01027 6.7e-268 tagE2 2.4.1.52 GT4 M Glycosyl transferases group 1
PMCDCCLF_01028 1.8e-297 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
PMCDCCLF_01029 4.2e-29
PMCDCCLF_01030 7.7e-94 ytqB 2.1.1.176 J Putative rRNA methylase
PMCDCCLF_01031 8.8e-124 3.6.1.27 I Acid phosphatase homologues
PMCDCCLF_01032 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PMCDCCLF_01033 3e-301 ytgP S Polysaccharide biosynthesis protein
PMCDCCLF_01034 1.8e-136 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PMCDCCLF_01035 3.7e-151 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PMCDCCLF_01036 3.9e-270 pepV 3.5.1.18 E dipeptidase PepV
PMCDCCLF_01037 4.1e-84 uspA T Belongs to the universal stress protein A family
PMCDCCLF_01038 1.6e-146 ugpC 3.6.3.20 E Belongs to the ABC transporter superfamily
PMCDCCLF_01039 5.6e-26 ugpC 3.6.3.20 E Belongs to the ABC transporter superfamily
PMCDCCLF_01040 1.5e-172 ugpA U Binding-protein-dependent transport system inner membrane component
PMCDCCLF_01041 1.1e-150 ugpE G ABC transporter permease
PMCDCCLF_01042 6.4e-262 ugpB G Bacterial extracellular solute-binding protein
PMCDCCLF_01043 3.8e-125 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PMCDCCLF_01044 3.8e-119 dck 2.7.1.74 F deoxynucleoside kinase
PMCDCCLF_01045 5.5e-41 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PMCDCCLF_01046 3.9e-179 XK27_06930 V domain protein
PMCDCCLF_01048 1.2e-124 V Transport permease protein
PMCDCCLF_01049 2.3e-156 V ABC transporter
PMCDCCLF_01050 4e-176 K LytTr DNA-binding domain
PMCDCCLF_01051 3.1e-155 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PMCDCCLF_01052 1.6e-64 K helix_turn_helix, mercury resistance
PMCDCCLF_01053 3.5e-117 GM NAD(P)H-binding
PMCDCCLF_01054 2.7e-158 ypaH EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PMCDCCLF_01055 2.9e-148 S Sucrose-6F-phosphate phosphohydrolase
PMCDCCLF_01056 1.7e-108
PMCDCCLF_01057 2.2e-224 pltK 2.7.13.3 T GHKL domain
PMCDCCLF_01058 1.6e-137 pltR K LytTr DNA-binding domain
PMCDCCLF_01059 4.5e-55
PMCDCCLF_01060 2.5e-59
PMCDCCLF_01061 3e-114 S CAAX protease self-immunity
PMCDCCLF_01062 1.6e-85 ohrR K helix_turn_helix multiple antibiotic resistance protein
PMCDCCLF_01063 1e-90
PMCDCCLF_01064 2.5e-46
PMCDCCLF_01065 0.0 uvrA2 L ABC transporter
PMCDCCLF_01067 3.9e-212 L Belongs to the 'phage' integrase family
PMCDCCLF_01072 1.9e-155 L COG2801 Transposase and inactivated derivatives
PMCDCCLF_01073 9.8e-39 L Transposase and inactivated derivatives
PMCDCCLF_01076 7.9e-11 tcdC
PMCDCCLF_01077 1.6e-83 K Peptidase S24-like
PMCDCCLF_01078 2.9e-11
PMCDCCLF_01079 8.5e-64 S DNA binding
PMCDCCLF_01083 2.3e-51 S Domain of unknown function (DUF771)
PMCDCCLF_01087 1.8e-145 S Protein of unknown function (DUF1351)
PMCDCCLF_01088 4.7e-106 S ERF superfamily
PMCDCCLF_01089 6.8e-62 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PMCDCCLF_01090 1.9e-132 S Putative HNHc nuclease
PMCDCCLF_01091 1.7e-42 L Helix-turn-helix domain
PMCDCCLF_01092 1.3e-45
PMCDCCLF_01093 7.7e-61 S Transcriptional regulator, RinA family
PMCDCCLF_01094 2.7e-87
PMCDCCLF_01095 1.3e-13 V HNH nucleases
PMCDCCLF_01096 2.3e-87 L HNH nucleases
PMCDCCLF_01099 3e-78 S Phage terminase, small subunit
PMCDCCLF_01100 0.0 S Phage Terminase
PMCDCCLF_01101 5.6e-26 S Protein of unknown function (DUF1056)
PMCDCCLF_01102 6.8e-223 S Phage portal protein
PMCDCCLF_01103 4.2e-122 S Clp protease
PMCDCCLF_01104 2.7e-222 S Phage capsid family
PMCDCCLF_01105 5.7e-50 S Phage gp6-like head-tail connector protein
PMCDCCLF_01106 2e-24 S Phage head-tail joining protein
PMCDCCLF_01107 1.7e-38
PMCDCCLF_01108 1.6e-27
PMCDCCLF_01109 5.9e-72 S Phage tail tube protein
PMCDCCLF_01112 0.0 S peptidoglycan catabolic process
PMCDCCLF_01113 6e-59 S Phage tail protein
PMCDCCLF_01114 7.5e-149 S Phage tail protein
PMCDCCLF_01115 3.7e-292 S Phage minor structural protein
PMCDCCLF_01116 5.5e-222
PMCDCCLF_01119 1.4e-55
PMCDCCLF_01120 6.8e-13 S peptidoglycan catabolic process
PMCDCCLF_01121 2.1e-200 lys M Glycosyl hydrolases family 25
PMCDCCLF_01122 3.3e-37 S Haemolysin XhlA
PMCDCCLF_01125 1.1e-53
PMCDCCLF_01126 3.5e-10
PMCDCCLF_01127 2.1e-180
PMCDCCLF_01128 1.9e-89 gtcA S Teichoic acid glycosylation protein
PMCDCCLF_01129 3.6e-58 S Protein of unknown function (DUF1516)
PMCDCCLF_01130 0.0 yitJ 1.5.1.20, 2.1.1.10, 2.1.1.13 E catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
PMCDCCLF_01131 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PMCDCCLF_01132 6.1e-307 S Protein conserved in bacteria
PMCDCCLF_01133 9.7e-230 sat 2.7.7.4 H the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms
PMCDCCLF_01134 8.7e-113 cysC 2.7.1.25, 2.7.7.4 F Catalyzes the synthesis of activated sulfate
PMCDCCLF_01135 3.7e-182 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain
PMCDCCLF_01136 1.8e-304 astA 2.8.2.22 M Arylsulfotransferase Ig-like domain
PMCDCCLF_01137 0.0 yfbS P Sodium:sulfate symporter transmembrane region
PMCDCCLF_01138 2.1e-244 dinF V MatE
PMCDCCLF_01139 1.9e-31
PMCDCCLF_01142 1.7e-78 elaA S Acetyltransferase (GNAT) domain
PMCDCCLF_01143 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PMCDCCLF_01144 6.7e-81
PMCDCCLF_01145 0.0 yhcA V MacB-like periplasmic core domain
PMCDCCLF_01146 7.6e-107
PMCDCCLF_01147 0.0 K PRD domain
PMCDCCLF_01148 1.4e-98 K PRD domain
PMCDCCLF_01149 2.4e-62 S Domain of unknown function (DUF3284)
PMCDCCLF_01150 1.4e-51 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
PMCDCCLF_01151 1.1e-47 pts15B 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PMCDCCLF_01152 6.1e-220 pts15C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMCDCCLF_01153 1.5e-288 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PMCDCCLF_01154 4.4e-147 EGP Major facilitator Superfamily
PMCDCCLF_01155 3.1e-56 EGP Major facilitator Superfamily
PMCDCCLF_01156 2.7e-114 M ErfK YbiS YcfS YnhG
PMCDCCLF_01157 4e-34 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PMCDCCLF_01158 8.4e-284 ydfD K Alanine-glyoxylate amino-transferase
PMCDCCLF_01159 4e-102 argO S LysE type translocator
PMCDCCLF_01160 1.9e-214 arcT 2.6.1.1 E Aminotransferase
PMCDCCLF_01161 4.4e-77 argR K Regulates arginine biosynthesis genes
PMCDCCLF_01162 2.9e-12
PMCDCCLF_01163 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PMCDCCLF_01164 1e-54 yheA S Belongs to the UPF0342 family
PMCDCCLF_01165 9.1e-231 yhaO L Ser Thr phosphatase family protein
PMCDCCLF_01166 0.0 L AAA domain
PMCDCCLF_01167 2.9e-187 yhaM S Metal dependent phosphohydrolases with conserved 'HD' motif.
PMCDCCLF_01168 8.7e-215
PMCDCCLF_01169 5.2e-181 3.4.21.102 M Peptidase family S41
PMCDCCLF_01170 1.2e-177 K LysR substrate binding domain
PMCDCCLF_01171 2.1e-111 1.3.5.4 S NADPH-dependent FMN reductase
PMCDCCLF_01172 0.0 1.3.5.4 C FAD binding domain
PMCDCCLF_01173 1.7e-99
PMCDCCLF_01174 3.5e-76 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
PMCDCCLF_01175 8.4e-60 M domain protein
PMCDCCLF_01176 1.5e-22 M domain protein
PMCDCCLF_01177 0.0 L Transposase
PMCDCCLF_01178 1e-51 M domain protein
PMCDCCLF_01179 5.7e-23 M domain protein
PMCDCCLF_01181 4.8e-48 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PMCDCCLF_01182 7.7e-56 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PMCDCCLF_01183 3.2e-52 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PMCDCCLF_01184 0.0 3.6.3.6 P Cation transporter/ATPase, N-terminus
PMCDCCLF_01185 1e-200 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PMCDCCLF_01186 1.6e-272 mutS L ATPase domain of DNA mismatch repair MUTS family
PMCDCCLF_01187 1e-268 mutS L MutS domain V
PMCDCCLF_01188 8.9e-184 ykoT GT2 M Glycosyl transferase family 2
PMCDCCLF_01189 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PMCDCCLF_01190 4.8e-67 S NUDIX domain
PMCDCCLF_01191 0.0 S membrane
PMCDCCLF_01192 3.7e-172 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PMCDCCLF_01193 1.8e-86 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
PMCDCCLF_01194 6.9e-223 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PMCDCCLF_01195 1.4e-81 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PMCDCCLF_01196 9.3e-106 GBS0088 S Nucleotidyltransferase
PMCDCCLF_01197 1.4e-106
PMCDCCLF_01198 5.1e-116 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
PMCDCCLF_01199 3.3e-112 K Bacterial regulatory proteins, tetR family
PMCDCCLF_01200 2.1e-241 npr 1.11.1.1 C NADH oxidase
PMCDCCLF_01201 0.0
PMCDCCLF_01202 7.9e-61
PMCDCCLF_01203 1.4e-192 S Fn3-like domain
PMCDCCLF_01204 4e-103 S WxL domain surface cell wall-binding
PMCDCCLF_01205 3.5e-78 S WxL domain surface cell wall-binding
PMCDCCLF_01206 3.3e-129 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PMCDCCLF_01207 3.5e-39
PMCDCCLF_01208 9.9e-82 hit FG histidine triad
PMCDCCLF_01209 1.6e-134 ecsA V ABC transporter, ATP-binding protein
PMCDCCLF_01210 4.8e-224 ecsB U ABC transporter
PMCDCCLF_01211 3.2e-152 ytmP 2.7.1.89 M Choline/ethanolamine kinase
PMCDCCLF_01212 9e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PMCDCCLF_01213 1.6e-54 ytzB S Peptidase propeptide and YPEB domain
PMCDCCLF_01214 1.5e-112 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PMCDCCLF_01215 0.0 sftA D Belongs to the FtsK SpoIIIE SftA family
PMCDCCLF_01216 1.1e-253 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PMCDCCLF_01217 7.9e-21 S Virus attachment protein p12 family
PMCDCCLF_01218 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
PMCDCCLF_01219 1.3e-34 feoA P FeoA domain
PMCDCCLF_01220 4.2e-144 sufC O FeS assembly ATPase SufC
PMCDCCLF_01221 2.9e-243 sufD O FeS assembly protein SufD
PMCDCCLF_01222 8.9e-234 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PMCDCCLF_01223 7.1e-83 nifU C SUF system FeS assembly protein, NifU family
PMCDCCLF_01224 1.4e-272 sufB O assembly protein SufB
PMCDCCLF_01225 5.5e-45 yitW S Iron-sulfur cluster assembly protein
PMCDCCLF_01226 2.3e-111 hipB K Helix-turn-helix
PMCDCCLF_01227 4.5e-121 ybhL S Belongs to the BI1 family
PMCDCCLF_01228 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PMCDCCLF_01229 1.5e-157 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PMCDCCLF_01230 7.8e-103 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PMCDCCLF_01231 4.6e-91 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PMCDCCLF_01232 1.1e-248 dnaB L replication initiation and membrane attachment
PMCDCCLF_01233 2.1e-171 dnaI L Primosomal protein DnaI
PMCDCCLF_01234 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PMCDCCLF_01235 1.8e-84 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PMCDCCLF_01236 1.9e-26 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PMCDCCLF_01237 7.3e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PMCDCCLF_01238 9.9e-57
PMCDCCLF_01239 9.4e-239 yrvN L AAA C-terminal domain
PMCDCCLF_01240 7.2e-197 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PMCDCCLF_01241 1e-62 hxlR K Transcriptional regulator, HxlR family
PMCDCCLF_01242 1.5e-135 racD 5.1.1.13 G Belongs to the aspartate glutamate racemases family
PMCDCCLF_01243 1e-248 pgaC GT2 M Glycosyl transferase
PMCDCCLF_01244 2.9e-79
PMCDCCLF_01245 1.4e-98 yqeG S HAD phosphatase, family IIIA
PMCDCCLF_01246 1.7e-215 yqeH S Ribosome biogenesis GTPase YqeH
PMCDCCLF_01247 1.1e-50 yhbY J RNA-binding protein
PMCDCCLF_01248 1.4e-118 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PMCDCCLF_01249 3.2e-115 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PMCDCCLF_01250 2.1e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PMCDCCLF_01251 5.8e-140 yqeM Q Methyltransferase
PMCDCCLF_01252 4.9e-218 ylbM S Belongs to the UPF0348 family
PMCDCCLF_01253 4.6e-97 yceD S Uncharacterized ACR, COG1399
PMCDCCLF_01254 2.2e-89 S Peptidase propeptide and YPEB domain
PMCDCCLF_01255 2.3e-168 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PMCDCCLF_01256 3e-273 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PMCDCCLF_01257 4.2e-245 rarA L recombination factor protein RarA
PMCDCCLF_01258 4.3e-121 K response regulator
PMCDCCLF_01259 5.2e-306 arlS 2.7.13.3 T Histidine kinase
PMCDCCLF_01260 5.8e-172 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PMCDCCLF_01261 0.0 sbcC L Putative exonuclease SbcCD, C subunit
PMCDCCLF_01262 1.3e-226 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PMCDCCLF_01263 3.9e-99 S SdpI/YhfL protein family
PMCDCCLF_01264 1e-162 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PMCDCCLF_01265 6.4e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PMCDCCLF_01266 7.9e-140 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PMCDCCLF_01267 1.3e-93 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
PMCDCCLF_01268 7.4e-64 yodB K Transcriptional regulator, HxlR family
PMCDCCLF_01269 4.9e-201 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PMCDCCLF_01270 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PMCDCCLF_01271 6.6e-186 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PMCDCCLF_01272 2.6e-112 udk 2.7.1.48 F Cytidine monophosphokinase
PMCDCCLF_01273 6.8e-81 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PMCDCCLF_01274 2.3e-96 liaI S membrane
PMCDCCLF_01275 4e-75 XK27_02470 K LytTr DNA-binding domain
PMCDCCLF_01276 1.5e-54 yneR S Belongs to the HesB IscA family
PMCDCCLF_01277 0.0 S membrane
PMCDCCLF_01278 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
PMCDCCLF_01279 1.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PMCDCCLF_01280 2.8e-102 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PMCDCCLF_01281 3e-114 gluP 3.4.21.105 S Peptidase, S54 family
PMCDCCLF_01282 1.4e-33 yqgQ S Bacterial protein of unknown function (DUF910)
PMCDCCLF_01283 5.7e-180 glk 2.7.1.2 G Glucokinase
PMCDCCLF_01284 1.9e-110 pepE 3.4.13.21 E Belongs to the peptidase S51 family
PMCDCCLF_01285 4.4e-68 yqhL P Rhodanese-like protein
PMCDCCLF_01286 6.9e-23 WQ51_02665 S Protein of unknown function (DUF3042)
PMCDCCLF_01287 5.8e-140 glpQ 3.1.4.46 C phosphodiesterase
PMCDCCLF_01288 2.4e-175 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PMCDCCLF_01289 4.6e-64 glnR K Transcriptional regulator
PMCDCCLF_01290 6.2e-265 glnA 6.3.1.2 E glutamine synthetase
PMCDCCLF_01291 6.9e-162
PMCDCCLF_01292 4e-181
PMCDCCLF_01293 3.4e-97 dut S Protein conserved in bacteria
PMCDCCLF_01294 9.1e-56
PMCDCCLF_01295 1.7e-30
PMCDCCLF_01299 5.4e-19
PMCDCCLF_01300 5.2e-89 K Transcriptional regulator
PMCDCCLF_01301 7.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
PMCDCCLF_01302 3.2e-53 ysxB J Cysteine protease Prp
PMCDCCLF_01303 5.4e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PMCDCCLF_01304 5.9e-194 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PMCDCCLF_01305 2.2e-99 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PMCDCCLF_01306 3.5e-74 yqhY S Asp23 family, cell envelope-related function
PMCDCCLF_01307 1.7e-67 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PMCDCCLF_01308 2.2e-151 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PMCDCCLF_01309 1.6e-244 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PMCDCCLF_01310 4.3e-33 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PMCDCCLF_01311 3e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PMCDCCLF_01312 4e-150 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PMCDCCLF_01313 7.4e-77 argR K Regulates arginine biosynthesis genes
PMCDCCLF_01314 6.3e-307 recN L May be involved in recombinational repair of damaged DNA
PMCDCCLF_01315 5.7e-222 opuCA 3.6.3.32 E ABC transporter, ATP-binding protein
PMCDCCLF_01316 1.2e-104 opuCB E ABC transporter permease
PMCDCCLF_01317 6e-174 opuCC M Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PMCDCCLF_01318 4.9e-106 opuCD P Binding-protein-dependent transport system inner membrane component
PMCDCCLF_01319 1.7e-54
PMCDCCLF_01320 3.3e-112 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
PMCDCCLF_01321 2.4e-30 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PMCDCCLF_01322 4e-218 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PMCDCCLF_01323 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PMCDCCLF_01324 4.2e-175 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PMCDCCLF_01325 1.4e-253 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PMCDCCLF_01326 1.7e-134 stp 3.1.3.16 T phosphatase
PMCDCCLF_01327 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
PMCDCCLF_01328 1.6e-163 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PMCDCCLF_01329 1.2e-117 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PMCDCCLF_01330 5.8e-123 thiN 2.7.6.2 H thiamine pyrophosphokinase
PMCDCCLF_01331 4.9e-27 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PMCDCCLF_01332 1.8e-57 asp S Asp23 family, cell envelope-related function
PMCDCCLF_01333 0.0 yloV S DAK2 domain fusion protein YloV
PMCDCCLF_01334 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PMCDCCLF_01335 6.7e-190 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PMCDCCLF_01336 1.7e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PMCDCCLF_01337 5.7e-129 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PMCDCCLF_01338 0.0 smc D Required for chromosome condensation and partitioning
PMCDCCLF_01339 6.6e-170 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PMCDCCLF_01340 2.6e-58 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PMCDCCLF_01341 1.1e-219 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PMCDCCLF_01342 2.9e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PMCDCCLF_01343 2.6e-39 ylqC S Belongs to the UPF0109 family
PMCDCCLF_01344 8.2e-96 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PMCDCCLF_01345 3.4e-140 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PMCDCCLF_01346 1.9e-59 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PMCDCCLF_01347 1.4e-50
PMCDCCLF_01348 0.0 pelX UW LPXTG-motif cell wall anchor domain protein
PMCDCCLF_01349 2.6e-85
PMCDCCLF_01350 6.7e-139 ecsA_2 V AAA domain, putative AbiEii toxin, Type IV TA system
PMCDCCLF_01351 8.1e-272 XK27_00765
PMCDCCLF_01353 2.9e-268 trpE 4.1.3.27 EH Anthranilate synthase component I, N terminal region
PMCDCCLF_01354 5.5e-104 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH Peptidase C26
PMCDCCLF_01355 5.9e-167 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PMCDCCLF_01356 2.4e-123 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
PMCDCCLF_01357 6.5e-108 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E Belongs to the TrpF family
PMCDCCLF_01358 2.3e-226 trpB 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PMCDCCLF_01359 3.9e-142 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PMCDCCLF_01360 1.5e-97 entB 3.5.1.19 Q Isochorismatase family
PMCDCCLF_01361 2.6e-177 1.6.5.5 C Zinc-binding dehydrogenase
PMCDCCLF_01362 1.6e-67 ybbJ K Acetyltransferase (GNAT) family
PMCDCCLF_01363 4.4e-217 E glutamate:sodium symporter activity
PMCDCCLF_01364 2.9e-215 3.5.1.47 E Peptidase family M20/M25/M40
PMCDCCLF_01365 5.1e-198 adhB 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PMCDCCLF_01366 2.7e-58 S Protein of unknown function (DUF1648)
PMCDCCLF_01367 3e-145 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PMCDCCLF_01368 1.1e-178 yneE K Transcriptional regulator
PMCDCCLF_01369 2.3e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PMCDCCLF_01370 7.7e-180 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PMCDCCLF_01371 3.8e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PMCDCCLF_01372 5.8e-169 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
PMCDCCLF_01373 1.2e-126 IQ reductase
PMCDCCLF_01374 2.1e-227 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PMCDCCLF_01375 5.9e-74 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PMCDCCLF_01376 1.2e-70 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
PMCDCCLF_01377 2.1e-260 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
PMCDCCLF_01378 3.5e-157 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PMCDCCLF_01379 8.8e-139 accA 2.1.3.15, 6.4.1.2 I alpha subunit
PMCDCCLF_01380 1.3e-134 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
PMCDCCLF_01381 2.4e-98 2.7.8.7 H Belongs to the P-Pant transferase superfamily
PMCDCCLF_01382 4.1e-99 S Protein of unknown function (DUF554)
PMCDCCLF_01383 2.7e-160 K LysR substrate binding domain
PMCDCCLF_01384 4.6e-88 ykhA 3.1.2.20 I Thioesterase superfamily
PMCDCCLF_01385 1.1e-192 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PMCDCCLF_01386 6.8e-93 K transcriptional regulator
PMCDCCLF_01387 1.2e-302 norB EGP Major Facilitator
PMCDCCLF_01388 4.4e-139 f42a O Band 7 protein
PMCDCCLF_01389 2.2e-39 L Pfam:Integrase_AP2
PMCDCCLF_01390 1.2e-25 L Phage integrase, N-terminal SAM-like domain
PMCDCCLF_01392 4e-09
PMCDCCLF_01394 1.1e-53
PMCDCCLF_01395 1.6e-28
PMCDCCLF_01396 2.5e-209 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PMCDCCLF_01397 5.9e-48 1.14.99.53 AA10 S Lytic polysaccharide mono-oxygenase, cellulose-degrading
PMCDCCLF_01398 8.4e-50 1.14.99.53 AA10 S Lytic polysaccharide mono-oxygenase, cellulose-degrading
PMCDCCLF_01399 5.8e-48 ycnE 3.1.1.29 S Antibiotic biosynthesis monooxygenase
PMCDCCLF_01400 7.9e-41
PMCDCCLF_01401 4.3e-67 tspO T TspO/MBR family
PMCDCCLF_01402 1.4e-75 uspA T Belongs to the universal stress protein A family
PMCDCCLF_01403 8e-66 S Protein of unknown function (DUF805)
PMCDCCLF_01404 1.8e-164 yegS 2.7.1.107 I Diacylglycerol kinase catalytic domain
PMCDCCLF_01405 3.5e-36
PMCDCCLF_01406 3.1e-14
PMCDCCLF_01407 6.5e-41 S transglycosylase associated protein
PMCDCCLF_01408 4.8e-29 S CsbD-like
PMCDCCLF_01409 1.2e-13
PMCDCCLF_01410 2.7e-17
PMCDCCLF_01411 8.6e-281 pipD E Dipeptidase
PMCDCCLF_01412 5.1e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PMCDCCLF_01413 5.7e-255 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PMCDCCLF_01414 1e-170 2.5.1.74 H UbiA prenyltransferase family
PMCDCCLF_01415 1.4e-136 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 U Ion channel
PMCDCCLF_01416 3.9e-50
PMCDCCLF_01417 1.3e-42
PMCDCCLF_01418 8.7e-259 gabT 2.6.1.19, 5.1.1.21 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PMCDCCLF_01419 1.4e-265 yfnA E Amino Acid
PMCDCCLF_01420 1.2e-149 yitU 3.1.3.104 S hydrolase
PMCDCCLF_01421 1.8e-267 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
PMCDCCLF_01422 2.9e-90 S Domain of unknown function (DUF4767)
PMCDCCLF_01423 2.5e-250 malT G Major Facilitator
PMCDCCLF_01424 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PMCDCCLF_01425 2.1e-193 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PMCDCCLF_01426 9.6e-197 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PMCDCCLF_01427 7.6e-205 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PMCDCCLF_01428 7.4e-175 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PMCDCCLF_01429 4e-170 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
PMCDCCLF_01430 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PMCDCCLF_01431 2.1e-72 ypmB S protein conserved in bacteria
PMCDCCLF_01432 1.1e-225 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
PMCDCCLF_01433 5.4e-258 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PMCDCCLF_01434 1.3e-128 dnaD L Replication initiation and membrane attachment
PMCDCCLF_01435 2.4e-187 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PMCDCCLF_01436 2e-99 metI P ABC transporter permease
PMCDCCLF_01437 5.5e-158 metQ_4 P Belongs to the nlpA lipoprotein family
PMCDCCLF_01438 2e-83 uspA T Universal stress protein family
PMCDCCLF_01439 1.9e-303 ftpA P Binding-protein-dependent transport system inner membrane component
PMCDCCLF_01440 1.9e-175 ftpB P Bacterial extracellular solute-binding protein
PMCDCCLF_01441 5.7e-166 phnT 3.6.3.30 P ATPases associated with a variety of cellular activities
PMCDCCLF_01442 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PMCDCCLF_01443 7.6e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PMCDCCLF_01444 8.3e-110 ypsA S Belongs to the UPF0398 family
PMCDCCLF_01445 3.2e-56 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PMCDCCLF_01447 1.8e-223 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PMCDCCLF_01448 1.2e-46 K helix_turn_helix, Arsenical Resistance Operon Repressor
PMCDCCLF_01449 7.1e-199 P Major Facilitator Superfamily
PMCDCCLF_01450 8e-145 yjfP S COG1073 Hydrolases of the alpha beta superfamily
PMCDCCLF_01451 4.4e-73 S SnoaL-like domain
PMCDCCLF_01452 7.1e-200 M Glycosyltransferase, group 2 family protein
PMCDCCLF_01453 1.2e-207 mccF V LD-carboxypeptidase
PMCDCCLF_01454 1.2e-46 K Acetyltransferase (GNAT) domain
PMCDCCLF_01455 4.5e-239 M hydrolase, family 25
PMCDCCLF_01456 1.8e-104 mccF 3.4.17.13 V LD-carboxypeptidase
PMCDCCLF_01457 9.1e-68 mccF 3.4.17.13 V LD-carboxypeptidase
PMCDCCLF_01458 1.7e-73 XK27_05710 K Acetyltransferase (GNAT) domain
PMCDCCLF_01459 7.3e-122
PMCDCCLF_01460 3.3e-121 3.6.3.35 P ATPases associated with a variety of cellular activities
PMCDCCLF_01461 2.1e-194
PMCDCCLF_01462 1.5e-146 S hydrolase activity, acting on ester bonds
PMCDCCLF_01463 1.8e-209 yurR 1.4.5.1 E FAD dependent oxidoreductase
PMCDCCLF_01464 2.2e-66 rnhA 3.1.26.4 L Ribonuclease HI
PMCDCCLF_01465 2.2e-61 esbA S Family of unknown function (DUF5322)
PMCDCCLF_01466 3.5e-294 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PMCDCCLF_01467 4.4e-74 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PMCDCCLF_01468 1e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PMCDCCLF_01469 1.3e-88 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PMCDCCLF_01470 8.1e-207 carA 6.3.5.5 F Belongs to the CarA family
PMCDCCLF_01471 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PMCDCCLF_01472 8.8e-288 S Bacterial membrane protein, YfhO
PMCDCCLF_01473 5.5e-112 pgm5 G Phosphoglycerate mutase family
PMCDCCLF_01474 5.8e-70 frataxin S Domain of unknown function (DU1801)
PMCDCCLF_01476 4.6e-128 cat 2.3.1.28 V Chloramphenicol acetyltransferase
PMCDCCLF_01477 3.5e-69 S LuxR family transcriptional regulator
PMCDCCLF_01478 3.6e-134 S Uncharacterized protein conserved in bacteria (DUF2087)
PMCDCCLF_01480 2.2e-90 3.6.1.55 F NUDIX domain
PMCDCCLF_01481 1.5e-57 V ABC transporter, ATP-binding protein
PMCDCCLF_01482 0.0 FbpA K Fibronectin-binding protein
PMCDCCLF_01483 1.9e-66 K Transcriptional regulator
PMCDCCLF_01484 7e-161 degV S EDD domain protein, DegV family
PMCDCCLF_01485 8.3e-78 yjcF 3.5.4.33, 4.4.1.8 K protein acetylation
PMCDCCLF_01486 1.7e-131 S Protein of unknown function (DUF975)
PMCDCCLF_01487 4.3e-10
PMCDCCLF_01488 1.4e-49
PMCDCCLF_01489 1.6e-148 2.7.7.12 C Domain of unknown function (DUF4931)
PMCDCCLF_01490 1.6e-211 pmrB EGP Major facilitator Superfamily
PMCDCCLF_01491 4.6e-12
PMCDCCLF_01492 6.2e-51 XK27_08430 S Staphylococcal protein of unknown function (DUF960)
PMCDCCLF_01493 1.5e-128 yejC S Protein of unknown function (DUF1003)
PMCDCCLF_01494 2.5e-134 XK27_00890 S Domain of unknown function (DUF368)
PMCDCCLF_01495 5.4e-245 cycA E Amino acid permease
PMCDCCLF_01496 3.5e-123
PMCDCCLF_01497 4.1e-59
PMCDCCLF_01498 1.8e-279 lldP C L-lactate permease
PMCDCCLF_01499 2.6e-226
PMCDCCLF_01500 3.7e-128 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the transfer of the cytidylyl group of CTP to D-ribitol 5-phosphate
PMCDCCLF_01501 1.2e-191 tarJ 1.1.1.137, 1.1.1.303, 1.1.1.4, 1.1.1.405 E Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate
PMCDCCLF_01502 8.6e-196 tarK 2.7.8.14, 2.7.8.47 H CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PMCDCCLF_01503 0.0 tarL 2.7.8.14, 2.7.8.47 H CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PMCDCCLF_01504 8.5e-93 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
PMCDCCLF_01505 1.8e-72 mgrA K helix_turn_helix multiple antibiotic resistance protein
PMCDCCLF_01506 4.1e-240 gshR1 1.8.1.7 C Glutathione reductase
PMCDCCLF_01507 9e-50
PMCDCCLF_01508 7.2e-242 M Glycosyl transferase family group 2
PMCDCCLF_01509 3e-276 GT89 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PMCDCCLF_01510 2.1e-157 xerD L Phage integrase, N-terminal SAM-like domain
PMCDCCLF_01511 4.2e-32 S YozE SAM-like fold
PMCDCCLF_01512 1e-95 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PMCDCCLF_01513 4e-80 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PMCDCCLF_01514 1.7e-168 ppaC 3.6.1.1 C inorganic pyrophosphatase
PMCDCCLF_01515 1.2e-177 K Transcriptional regulator
PMCDCCLF_01516 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PMCDCCLF_01517 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PMCDCCLF_01518 5.2e-105 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PMCDCCLF_01519 2.2e-170 lacX 5.1.3.3 G Aldose 1-epimerase
PMCDCCLF_01520 2.3e-257 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PMCDCCLF_01521 6.7e-93 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PMCDCCLF_01522 1.5e-177 xerC D Belongs to the 'phage' integrase family. XerC subfamily
PMCDCCLF_01523 2.5e-250 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PMCDCCLF_01524 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PMCDCCLF_01525 6.2e-157 dprA LU DNA protecting protein DprA
PMCDCCLF_01526 9e-136 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PMCDCCLF_01527 1.8e-161 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PMCDCCLF_01528 1.5e-227 XK27_05470 E Methionine synthase
PMCDCCLF_01529 2.3e-170 cpsY K Transcriptional regulator, LysR family
PMCDCCLF_01530 2.3e-173 L restriction endonuclease
PMCDCCLF_01531 1.9e-124 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
PMCDCCLF_01532 8.2e-196 XK27_00915 C Luciferase-like monooxygenase
PMCDCCLF_01533 3.3e-251 emrY EGP Major facilitator Superfamily
PMCDCCLF_01534 1.2e-261 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
PMCDCCLF_01535 3.4e-35 yozE S Belongs to the UPF0346 family
PMCDCCLF_01536 3.1e-113 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
PMCDCCLF_01537 2.1e-150 ypmR E GDSL-like Lipase/Acylhydrolase
PMCDCCLF_01538 5.1e-148 DegV S EDD domain protein, DegV family
PMCDCCLF_01539 5.1e-92 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PMCDCCLF_01540 1e-189 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PMCDCCLF_01541 0.0 yfmR S ABC transporter, ATP-binding protein
PMCDCCLF_01542 9.6e-85
PMCDCCLF_01543 7.2e-228 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PMCDCCLF_01544 5.4e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PMCDCCLF_01545 5.2e-130 3.1.3.102, 3.1.3.104 S hydrolase
PMCDCCLF_01546 4.7e-206 S Tetratricopeptide repeat protein
PMCDCCLF_01547 1.1e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PMCDCCLF_01548 2.7e-249 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PMCDCCLF_01549 1.8e-213 rpsA 1.17.7.4 J Ribosomal protein S1
PMCDCCLF_01550 3.8e-117 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PMCDCCLF_01551 2e-19 M Lysin motif
PMCDCCLF_01552 2e-269 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
PMCDCCLF_01553 9.9e-194 ypbB 5.1.3.1 S Helix-turn-helix domain
PMCDCCLF_01554 1.1e-96 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PMCDCCLF_01555 1.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PMCDCCLF_01556 7.9e-103 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PMCDCCLF_01557 5.7e-130 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PMCDCCLF_01558 4.8e-69 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PMCDCCLF_01559 1.1e-164 xerD D recombinase XerD
PMCDCCLF_01560 2.9e-170 cvfB S S1 domain
PMCDCCLF_01561 1.5e-74 yeaL S Protein of unknown function (DUF441)
PMCDCCLF_01562 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PMCDCCLF_01563 1.5e-180 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PMCDCCLF_01564 0.0 dnaE 2.7.7.7 L DNA polymerase
PMCDCCLF_01565 5.6e-29 S Protein of unknown function (DUF2929)
PMCDCCLF_01567 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PMCDCCLF_01568 1.4e-234 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PMCDCCLF_01569 8.5e-198 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PMCDCCLF_01570 1.6e-126 trmK 2.1.1.217 S SAM-dependent methyltransferase
PMCDCCLF_01571 1.1e-220 M O-Antigen ligase
PMCDCCLF_01572 5.4e-120 drrB U ABC-2 type transporter
PMCDCCLF_01573 6.7e-165 drrA V ABC transporter
PMCDCCLF_01574 3.1e-84 K helix_turn_helix multiple antibiotic resistance protein
PMCDCCLF_01575 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PMCDCCLF_01576 1.9e-62 P Rhodanese Homology Domain
PMCDCCLF_01577 2.1e-91 yetL K helix_turn_helix multiple antibiotic resistance protein
PMCDCCLF_01578 1.6e-205
PMCDCCLF_01579 5.7e-216 I transferase activity, transferring acyl groups other than amino-acyl groups
PMCDCCLF_01580 6.2e-182 C Zinc-binding dehydrogenase
PMCDCCLF_01581 0.0 3.6.3.6 P Cation transporter/ATPase, N-terminus
PMCDCCLF_01582 8.9e-245 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PMCDCCLF_01583 8.5e-241 EGP Major facilitator Superfamily
PMCDCCLF_01584 4.3e-77 K Transcriptional regulator
PMCDCCLF_01585 7e-209 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PMCDCCLF_01586 9.8e-176 tanA S alpha beta
PMCDCCLF_01587 0.0 naoX P Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PMCDCCLF_01588 8e-137 K DeoR C terminal sensor domain
PMCDCCLF_01589 1.7e-108 yjhB 3.6.1.13, 3.6.1.55 F NUDIX domain
PMCDCCLF_01590 9.1e-71 yneH 1.20.4.1 P ArsC family
PMCDCCLF_01591 1.4e-68 S Protein of unknown function (DUF1722)
PMCDCCLF_01592 1.2e-112 GM epimerase
PMCDCCLF_01593 0.0 CP_1020 S Zinc finger, swim domain protein
PMCDCCLF_01594 7.8e-81 K Bacterial regulatory proteins, tetR family
PMCDCCLF_01595 6.2e-214 S membrane
PMCDCCLF_01596 9.4e-15 K Bacterial regulatory proteins, tetR family
PMCDCCLF_01597 3.4e-72 S Alpha/beta hydrolase of unknown function (DUF915)
PMCDCCLF_01598 2.3e-27 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMCDCCLF_01599 2.3e-113 ppaX_1 3.1.3.18, 3.6.1.1 S haloacid dehalogenase-like hydrolase
PMCDCCLF_01600 1.5e-80 maa 2.3.1.18, 2.3.1.79 S Maltose O-acetyltransferase
PMCDCCLF_01601 1.2e-129 K Helix-turn-helix domain, rpiR family
PMCDCCLF_01602 1e-159 S Alpha beta hydrolase
PMCDCCLF_01603 1.4e-113 GM NmrA-like family
PMCDCCLF_01604 9.8e-79 S Uncharacterized protein conserved in bacteria (DUF2255)
PMCDCCLF_01605 1.9e-161 K Transcriptional regulator
PMCDCCLF_01606 1.9e-172 C nadph quinone reductase
PMCDCCLF_01607 2.8e-14 S Alpha beta hydrolase
PMCDCCLF_01608 2.3e-270 nox C Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PMCDCCLF_01609 1.2e-103 desR K helix_turn_helix, Lux Regulon
PMCDCCLF_01610 8.2e-207 desK 2.7.13.3 T Histidine kinase
PMCDCCLF_01611 3.1e-136 yvfS V ABC-2 type transporter
PMCDCCLF_01612 2.6e-158 yvfR V ABC transporter
PMCDCCLF_01614 6e-82 K Acetyltransferase (GNAT) domain
PMCDCCLF_01615 6.2e-73 K MarR family
PMCDCCLF_01616 1e-114 S Psort location CytoplasmicMembrane, score
PMCDCCLF_01617 2.6e-12 yjdF S Protein of unknown function (DUF2992)
PMCDCCLF_01618 1.9e-161 V ABC transporter, ATP-binding protein
PMCDCCLF_01619 9.8e-127 S ABC-2 family transporter protein
PMCDCCLF_01620 5.1e-198
PMCDCCLF_01621 1.1e-200
PMCDCCLF_01622 4.8e-165 ytrB V ABC transporter, ATP-binding protein
PMCDCCLF_01623 3.6e-64 K helix_turn_helix gluconate operon transcriptional repressor
PMCDCCLF_01624 4.6e-197 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PMCDCCLF_01625 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PMCDCCLF_01626 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PMCDCCLF_01627 6.8e-175 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PMCDCCLF_01628 3.1e-147 recO L Involved in DNA repair and RecF pathway recombination
PMCDCCLF_01629 1.5e-169 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PMCDCCLF_01630 4.5e-73 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
PMCDCCLF_01631 6.6e-84 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PMCDCCLF_01632 5.8e-180 phoH T phosphate starvation-inducible protein PhoH
PMCDCCLF_01633 2.6e-71 yqeY S YqeY-like protein
PMCDCCLF_01634 9.7e-23 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PMCDCCLF_01635 2.1e-151 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PMCDCCLF_01636 1.7e-128 C Enoyl-(Acyl carrier protein) reductase
PMCDCCLF_01637 1.9e-169 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PMCDCCLF_01638 2.9e-223 tagB 2.7.8.14, 2.7.8.44, 2.7.8.47 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PMCDCCLF_01639 1.7e-159 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PMCDCCLF_01640 4.7e-99 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PMCDCCLF_01641 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PMCDCCLF_01642 2.2e-243 hisS 6.1.1.21 J histidyl-tRNA synthetase
PMCDCCLF_01643 1.9e-155 lytH 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
PMCDCCLF_01644 7.8e-165 yniA G Fructosamine kinase
PMCDCCLF_01645 7.9e-114 3.1.3.18 J HAD-hyrolase-like
PMCDCCLF_01646 8.5e-78 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PMCDCCLF_01647 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PMCDCCLF_01648 9.6e-58
PMCDCCLF_01649 2.9e-134 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PMCDCCLF_01650 4.5e-177 prmA J Ribosomal protein L11 methyltransferase
PMCDCCLF_01651 3.6e-114 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PMCDCCLF_01652 1.4e-49
PMCDCCLF_01653 1.4e-49
PMCDCCLF_01654 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PMCDCCLF_01655 6.1e-246 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PMCDCCLF_01656 2.4e-34 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PMCDCCLF_01657 8.7e-234 dltB M MBOAT, membrane-bound O-acyltransferase family
PMCDCCLF_01658 7e-297 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PMCDCCLF_01659 8.8e-19 dltX S D-Ala-teichoic acid biosynthesis protein
PMCDCCLF_01660 4.4e-198 pbpX2 V Beta-lactamase
PMCDCCLF_01661 1.2e-184 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PMCDCCLF_01662 0.0 dnaK O Heat shock 70 kDa protein
PMCDCCLF_01663 1.5e-80 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PMCDCCLF_01664 2.4e-195 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PMCDCCLF_01665 2.8e-131 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
PMCDCCLF_01666 1.2e-188 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PMCDCCLF_01667 9.4e-172 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PMCDCCLF_01668 2.4e-87 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PMCDCCLF_01669 1.9e-195 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
PMCDCCLF_01670 5.8e-236 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PMCDCCLF_01671 1.9e-92
PMCDCCLF_01672 1e-215 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PMCDCCLF_01673 6.7e-265 ydiN 5.4.99.5 G Major Facilitator
PMCDCCLF_01674 4.6e-50 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PMCDCCLF_01675 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PMCDCCLF_01676 1.1e-47 ylxQ J ribosomal protein
PMCDCCLF_01677 9.5e-49 ylxR K Protein of unknown function (DUF448)
PMCDCCLF_01678 3.3e-217 nusA K Participates in both transcription termination and antitermination
PMCDCCLF_01679 4.2e-83 rimP J Required for maturation of 30S ribosomal subunits
PMCDCCLF_01680 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PMCDCCLF_01681 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PMCDCCLF_01682 9.5e-231 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PMCDCCLF_01683 8.4e-137 cdsA 2.7.7.41 I Belongs to the CDS family
PMCDCCLF_01684 1.8e-147 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PMCDCCLF_01685 2.5e-82 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PMCDCCLF_01686 2.2e-128 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PMCDCCLF_01687 3.9e-151 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PMCDCCLF_01688 6.5e-145 rpsB J Belongs to the universal ribosomal protein uS2 family
PMCDCCLF_01689 4.7e-134 S Haloacid dehalogenase-like hydrolase
PMCDCCLF_01690 2.3e-187 ldhA 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMCDCCLF_01691 2e-49 yazA L GIY-YIG catalytic domain protein
PMCDCCLF_01692 4.2e-133 yabB 2.1.1.223 L Methyltransferase small domain
PMCDCCLF_01693 1.2e-117 plsC 2.3.1.51 I Acyltransferase
PMCDCCLF_01694 4.3e-33 yneF S Uncharacterised protein family (UPF0154)
PMCDCCLF_01695 2.9e-36 ynzC S UPF0291 protein
PMCDCCLF_01696 5.6e-115 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PMCDCCLF_01697 3.2e-86
PMCDCCLF_01698 7.1e-217 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PMCDCCLF_01699 1.1e-76
PMCDCCLF_01700 3.5e-67
PMCDCCLF_01701 3.4e-177 csbB 2.4.1.83 GT2 M Glycosyltransferase like family 2
PMCDCCLF_01704 1.9e-17 S Short C-terminal domain
PMCDCCLF_01705 2.1e-25 S Short C-terminal domain
PMCDCCLF_01707 2.4e-42 L HTH-like domain
PMCDCCLF_01708 9.8e-36 L transposase activity
PMCDCCLF_01709 4e-50 L Belongs to the 'phage' integrase family
PMCDCCLF_01712 1.6e-31
PMCDCCLF_01713 2.1e-140 Q Methyltransferase
PMCDCCLF_01714 8.5e-57 ybjQ S Belongs to the UPF0145 family
PMCDCCLF_01715 7.2e-212 EGP Major facilitator Superfamily
PMCDCCLF_01716 1.5e-103 K Helix-turn-helix domain
PMCDCCLF_01717 2.9e-93 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PMCDCCLF_01718 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PMCDCCLF_01719 2e-50 yrvD S Lipopolysaccharide assembly protein A domain
PMCDCCLF_01720 5.6e-141 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PMCDCCLF_01721 2.8e-179 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PMCDCCLF_01722 3.2e-46
PMCDCCLF_01723 2.4e-245 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PMCDCCLF_01724 1.5e-135 fruR K DeoR C terminal sensor domain
PMCDCCLF_01725 5.1e-170 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PMCDCCLF_01726 6.7e-292 fruA 2.7.1.194, 2.7.1.200, 2.7.1.202 GT Phosphotransferase System
PMCDCCLF_01727 5.4e-253 cpdA S Calcineurin-like phosphoesterase
PMCDCCLF_01728 1.4e-262 cps4J S Polysaccharide biosynthesis protein
PMCDCCLF_01729 5.1e-176 cps4I M Glycosyltransferase like family 2
PMCDCCLF_01730 5.6e-231
PMCDCCLF_01731 1.1e-184 cps4G M Glycosyltransferase Family 4
PMCDCCLF_01732 1.2e-202 cps4F 2.4.1.21, 2.4.1.306 GT4,GT5 M Glycosyl transferases group 1
PMCDCCLF_01733 1.8e-127 tuaA M Bacterial sugar transferase
PMCDCCLF_01734 9.6e-180 cps4D 5.1.3.2 M RmlD substrate binding domain
PMCDCCLF_01735 3.5e-146 ywqE 3.1.3.48 GM PHP domain protein
PMCDCCLF_01736 7.3e-124 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PMCDCCLF_01737 2.9e-126 epsB M biosynthesis protein
PMCDCCLF_01738 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PMCDCCLF_01739 1.3e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PMCDCCLF_01740 9.2e-270 glnPH2 P ABC transporter permease
PMCDCCLF_01741 4.3e-22
PMCDCCLF_01742 9.9e-73 S Iron-sulphur cluster biosynthesis
PMCDCCLF_01743 2.2e-49 MA20_27270 S mazG nucleotide pyrophosphohydrolase
PMCDCCLF_01744 5.1e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
PMCDCCLF_01745 3.3e-236 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PMCDCCLF_01746 4.1e-213 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PMCDCCLF_01747 6.1e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PMCDCCLF_01748 1.1e-159 S Tetratricopeptide repeat
PMCDCCLF_01749 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PMCDCCLF_01750 6.2e-157 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PMCDCCLF_01751 6.3e-192 mdtG EGP Major Facilitator Superfamily
PMCDCCLF_01752 6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PMCDCCLF_01753 1.5e-34 rpsT J Binds directly to 16S ribosomal RNA
PMCDCCLF_01754 9.1e-187 holA 2.7.7.7 L DNA polymerase III delta subunit
PMCDCCLF_01755 0.0 comEC S Competence protein ComEC
PMCDCCLF_01756 6.4e-79 comEB 3.5.4.12 F ComE operon protein 2
PMCDCCLF_01757 1.2e-121 comEA L Competence protein ComEA
PMCDCCLF_01758 9.6e-197 ylbL T Belongs to the peptidase S16 family
PMCDCCLF_01759 2.1e-85 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PMCDCCLF_01760 1.7e-102 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PMCDCCLF_01761 1.5e-49 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
PMCDCCLF_01762 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PMCDCCLF_01763 1.6e-205 ftsW D Belongs to the SEDS family
PMCDCCLF_01764 1.5e-256
PMCDCCLF_01765 0.0 typA T GTP-binding protein TypA
PMCDCCLF_01766 6.3e-137 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
PMCDCCLF_01767 4.7e-45 yktA S Belongs to the UPF0223 family
PMCDCCLF_01768 1.4e-162 1.1.1.27 C L-malate dehydrogenase activity
PMCDCCLF_01769 1.2e-266 lpdA 1.8.1.4 C Dehydrogenase
PMCDCCLF_01770 1.8e-208 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PMCDCCLF_01771 4.5e-180 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
PMCDCCLF_01772 1.6e-210 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
PMCDCCLF_01773 1.2e-100 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PMCDCCLF_01774 1.6e-85
PMCDCCLF_01775 3.1e-33 ykzG S Belongs to the UPF0356 family
PMCDCCLF_01776 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PMCDCCLF_01777 1.7e-187 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PMCDCCLF_01778 3.7e-28
PMCDCCLF_01779 1.3e-195 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PMCDCCLF_01780 4.1e-108 mltD CBM50 M NlpC P60 family protein
PMCDCCLF_01781 0.0 L Transposase
PMCDCCLF_01782 4e-173 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PMCDCCLF_01783 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PMCDCCLF_01784 1.6e-120 S Repeat protein
PMCDCCLF_01785 5.5e-121 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
PMCDCCLF_01786 3.8e-268 N domain, Protein
PMCDCCLF_01787 1.7e-193 S Bacterial protein of unknown function (DUF916)
PMCDCCLF_01788 1.5e-119 N WxL domain surface cell wall-binding
PMCDCCLF_01789 4.5e-115 ktrA P domain protein
PMCDCCLF_01790 1.3e-241 ktrB P Potassium uptake protein
PMCDCCLF_01791 9e-225 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PMCDCCLF_01792 4.9e-57 XK27_04120 S Putative amino acid metabolism
PMCDCCLF_01793 7.1e-217 iscS 2.8.1.7 E Aminotransferase class V
PMCDCCLF_01794 1.8e-122 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PMCDCCLF_01795 4.6e-28
PMCDCCLF_01796 1.9e-95 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PMCDCCLF_01797 1.1e-189 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PMCDCCLF_01798 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PMCDCCLF_01799 1.2e-86 divIVA D DivIVA domain protein
PMCDCCLF_01800 3.4e-146 ylmH S S4 domain protein
PMCDCCLF_01801 1.2e-36 yggT S YGGT family
PMCDCCLF_01802 3.3e-71 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PMCDCCLF_01803 1.4e-229 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PMCDCCLF_01804 5.5e-245 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PMCDCCLF_01805 5.8e-163 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PMCDCCLF_01806 1.5e-197 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PMCDCCLF_01807 2.1e-260 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PMCDCCLF_01808 8.3e-179 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PMCDCCLF_01809 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PMCDCCLF_01810 7.5e-54 ftsL D Cell division protein FtsL
PMCDCCLF_01811 2.9e-176 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PMCDCCLF_01812 1.9e-77 mraZ K Belongs to the MraZ family
PMCDCCLF_01813 1.9e-62 S Protein of unknown function (DUF3397)
PMCDCCLF_01814 4.2e-175 corA P CorA-like Mg2+ transporter protein
PMCDCCLF_01815 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PMCDCCLF_01816 1.4e-95 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PMCDCCLF_01817 1.8e-113 ywnB S NAD(P)H-binding
PMCDCCLF_01818 3.7e-209 brnQ U Component of the transport system for branched-chain amino acids
PMCDCCLF_01820 3.1e-161 rrmA 2.1.1.187 H Methyltransferase
PMCDCCLF_01821 1.7e-41 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PMCDCCLF_01822 4.3e-206 XK27_05220 S AI-2E family transporter
PMCDCCLF_01823 2.5e-56 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PMCDCCLF_01824 1.3e-193 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PMCDCCLF_01825 5.1e-116 cutC P Participates in the control of copper homeostasis
PMCDCCLF_01826 8.9e-175 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
PMCDCCLF_01827 4.7e-151 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PMCDCCLF_01828 2.7e-120 yjbM 2.7.6.5 S RelA SpoT domain protein
PMCDCCLF_01829 3.6e-114 yjbH Q Thioredoxin
PMCDCCLF_01830 0.0 pepF E oligoendopeptidase F
PMCDCCLF_01831 8.4e-204 coiA 3.6.4.12 S Competence protein
PMCDCCLF_01832 2.2e-131 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PMCDCCLF_01833 7.9e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PMCDCCLF_01834 2.2e-139 yhfI S Metallo-beta-lactamase superfamily
PMCDCCLF_01835 1.3e-90 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
PMCDCCLF_01845 5.5e-08
PMCDCCLF_01857 1.5e-42 S COG NOG38524 non supervised orthologous group
PMCDCCLF_01858 3.5e-64
PMCDCCLF_01859 1.6e-75 yugI 5.3.1.9 J general stress protein
PMCDCCLF_01860 7.9e-108 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PMCDCCLF_01861 3e-119 dedA S SNARE-like domain protein
PMCDCCLF_01862 4.6e-117 S Protein of unknown function (DUF1461)
PMCDCCLF_01863 1.5e-146 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PMCDCCLF_01864 1.5e-80 yutD S Protein of unknown function (DUF1027)
PMCDCCLF_01865 8.7e-270 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PMCDCCLF_01866 4.4e-117 S Calcineurin-like phosphoesterase
PMCDCCLF_01867 1.2e-252 cycA E Amino acid permease
PMCDCCLF_01868 1.6e-219 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PMCDCCLF_01869 3.6e-186 ytxK 2.1.1.72 L N-6 DNA Methylase
PMCDCCLF_01871 1.7e-87 S Prokaryotic N-terminal methylation motif
PMCDCCLF_01872 8.6e-20
PMCDCCLF_01873 3.2e-83 gspG NU general secretion pathway protein
PMCDCCLF_01874 5.5e-43 comGC U competence protein ComGC
PMCDCCLF_01875 1.9e-189 comGB NU type II secretion system
PMCDCCLF_01876 2.8e-174 comGA NU Type II IV secretion system protein
PMCDCCLF_01877 4.8e-160 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PMCDCCLF_01878 4.1e-130 yebC K Transcriptional regulatory protein
PMCDCCLF_01879 1.6e-49 S DsrE/DsrF-like family
PMCDCCLF_01880 2.3e-164 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
PMCDCCLF_01881 1.9e-181 ccpA K catabolite control protein A
PMCDCCLF_01882 1.7e-215 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PMCDCCLF_01883 1.1e-80 K helix_turn_helix, mercury resistance
PMCDCCLF_01884 2.8e-56
PMCDCCLF_01885 1.9e-23 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PMCDCCLF_01886 2.6e-158 ykuT M mechanosensitive ion channel
PMCDCCLF_01887 1.1e-225 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PMCDCCLF_01888 2.6e-76 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PMCDCCLF_01889 6.5e-87 ykuL S (CBS) domain
PMCDCCLF_01890 1.2e-94 S Phosphoesterase
PMCDCCLF_01891 1e-110 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PMCDCCLF_01892 4.1e-150 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PMCDCCLF_01893 7.6e-126 yslB S Protein of unknown function (DUF2507)
PMCDCCLF_01894 3.3e-52 trxA O Belongs to the thioredoxin family
PMCDCCLF_01895 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PMCDCCLF_01896 2.7e-36 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PMCDCCLF_01897 1.6e-48 yrzB S Belongs to the UPF0473 family
PMCDCCLF_01898 7.3e-74 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PMCDCCLF_01899 2.4e-43 yrzL S Belongs to the UPF0297 family
PMCDCCLF_01900 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PMCDCCLF_01901 7.1e-245 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PMCDCCLF_01902 7e-178 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PMCDCCLF_01903 5.3e-217 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PMCDCCLF_01904 6.3e-29 yajC U Preprotein translocase
PMCDCCLF_01905 3.3e-227 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PMCDCCLF_01906 6.3e-201 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PMCDCCLF_01907 2.3e-187 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PMCDCCLF_01908 4.6e-106 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PMCDCCLF_01909 2.7e-91
PMCDCCLF_01910 0.0 S Bacterial membrane protein YfhO
PMCDCCLF_01911 1.3e-72
PMCDCCLF_01912 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PMCDCCLF_01913 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PMCDCCLF_01914 2.7e-154 ymdB S YmdB-like protein
PMCDCCLF_01915 2.1e-216 rny S Endoribonuclease that initiates mRNA decay
PMCDCCLF_01916 5e-191 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PMCDCCLF_01917 7.2e-231 cinA 3.5.1.42 S Belongs to the CinA family
PMCDCCLF_01918 3.7e-97 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PMCDCCLF_01919 5.7e-110 ymfM S Helix-turn-helix domain
PMCDCCLF_01920 6.4e-251 ymfH S Peptidase M16
PMCDCCLF_01921 6.5e-232 ymfF S Peptidase M16 inactive domain protein
PMCDCCLF_01922 1e-254 lysC 2.7.2.4 E Belongs to the aspartokinase family
PMCDCCLF_01923 1.5e-155 aatB ET ABC transporter substrate-binding protein
PMCDCCLF_01924 2.5e-115 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PMCDCCLF_01925 4.6e-109 glnP P ABC transporter permease
PMCDCCLF_01926 1.2e-146 minD D Belongs to the ParA family
PMCDCCLF_01927 1.4e-116 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PMCDCCLF_01928 1.2e-88 mreD M rod shape-determining protein MreD
PMCDCCLF_01929 2.6e-144 mreC M Involved in formation and maintenance of cell shape
PMCDCCLF_01930 2.8e-161 mreB D cell shape determining protein MreB
PMCDCCLF_01931 1.3e-116 radC L DNA repair protein
PMCDCCLF_01932 4.7e-249 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PMCDCCLF_01933 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PMCDCCLF_01934 3e-89 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PMCDCCLF_01935 2e-233 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
PMCDCCLF_01936 1.9e-228 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PMCDCCLF_01937 1.7e-218 iscS2 2.8.1.7 E Aminotransferase class V
PMCDCCLF_01938 0.0 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PMCDCCLF_01939 5e-81 ytsP 1.8.4.14 T GAF domain-containing protein
PMCDCCLF_01940 3.1e-107 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PMCDCCLF_01941 5.2e-113 yktB S Belongs to the UPF0637 family
PMCDCCLF_01942 2.5e-80 yueI S Protein of unknown function (DUF1694)
PMCDCCLF_01943 7e-110 S Protein of unknown function (DUF1648)
PMCDCCLF_01944 8.6e-44 czrA K Helix-turn-helix domain
PMCDCCLF_01945 6.2e-230 malL 3.2.1.10 GH13 G COG0366 Glycosidases
PMCDCCLF_01946 9.2e-42 2.7.1.191 G PTS system fructose IIA component
PMCDCCLF_01947 2.7e-104 G PTS system mannose fructose sorbose family IID component
PMCDCCLF_01948 3.6e-103 G PTS system sorbose-specific iic component
PMCDCCLF_01949 6e-66 2.7.1.191 G PTS system sorbose subfamily IIB component
PMCDCCLF_01950 5.9e-95 cytR 5.1.1.1 K Periplasmic binding proteins and sugar binding domain of LacI family
PMCDCCLF_01951 0.0 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
PMCDCCLF_01952 8e-238 rarA L recombination factor protein RarA
PMCDCCLF_01953 1.5e-38
PMCDCCLF_01954 6.2e-82 usp6 T universal stress protein
PMCDCCLF_01955 1e-199 bla2 3.5.2.6 V Beta-lactamase enzyme family
PMCDCCLF_01956 3.3e-161 2.3.1.19 K Helix-turn-helix XRE-family like proteins
PMCDCCLF_01957 5.1e-295 glpQ3 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
PMCDCCLF_01958 5.4e-214 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PMCDCCLF_01959 3.6e-188 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PMCDCCLF_01960 3.5e-177 S Protein of unknown function (DUF2785)
PMCDCCLF_01961 2.8e-168 hicD1 1.1.1.27 C Belongs to the LDH MDH superfamily
PMCDCCLF_01962 6.5e-148 metQ M Belongs to the nlpA lipoprotein family
PMCDCCLF_01963 1.4e-111 metI U ABC transporter permease
PMCDCCLF_01964 4e-187 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PMCDCCLF_01965 3.6e-48 gcsH2 E glycine cleavage
PMCDCCLF_01966 9.3e-220 rodA D Belongs to the SEDS family
PMCDCCLF_01967 3.3e-33 S Protein of unknown function (DUF2969)
PMCDCCLF_01968 2.3e-43 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PMCDCCLF_01969 2.7e-180 mbl D Cell shape determining protein MreB Mrl
PMCDCCLF_01970 2.1e-102 J Acetyltransferase (GNAT) domain
PMCDCCLF_01971 4.4e-247 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PMCDCCLF_01972 1.1e-50 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PMCDCCLF_01973 2.1e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PMCDCCLF_01974 2.3e-165 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PMCDCCLF_01975 2.7e-280 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PMCDCCLF_01976 1.8e-90 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PMCDCCLF_01977 6e-51 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PMCDCCLF_01978 2.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PMCDCCLF_01979 6.5e-128 atpB C it plays a direct role in the translocation of protons across the membrane
PMCDCCLF_01980 1e-232 pyrP F Permease
PMCDCCLF_01981 4.7e-114 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PMCDCCLF_01982 2.9e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PMCDCCLF_01983 6.9e-192 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PMCDCCLF_01984 6.6e-159 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PMCDCCLF_01985 1.2e-197 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PMCDCCLF_01986 9.3e-109 tdk 2.7.1.21 F thymidine kinase
PMCDCCLF_01987 1.5e-263 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
PMCDCCLF_01988 5.9e-137 cobQ S glutamine amidotransferase
PMCDCCLF_01989 9.8e-196 manA 5.3.1.8 G mannose-6-phosphate isomerase
PMCDCCLF_01990 1.4e-192 ampC V Beta-lactamase
PMCDCCLF_01991 5.2e-29
PMCDCCLF_01992 1e-203 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PMCDCCLF_01993 1.9e-58
PMCDCCLF_01994 5.3e-125
PMCDCCLF_01995 0.0 yfiC V ABC transporter
PMCDCCLF_01996 0.0 ycfI V ABC transporter, ATP-binding protein
PMCDCCLF_01997 3.3e-65 S Protein of unknown function (DUF1093)
PMCDCCLF_01998 3.8e-135 yxkH G Polysaccharide deacetylase
PMCDCCLF_02001 8.9e-36 hol S Bacteriophage holin
PMCDCCLF_02002 4.7e-48
PMCDCCLF_02003 4.8e-173 M Glycosyl hydrolases family 25
PMCDCCLF_02005 2.5e-69 S Protein of unknown function (DUF1617)
PMCDCCLF_02006 0.0 sidC GT2,GT4 LM DNA recombination
PMCDCCLF_02007 5.9e-61
PMCDCCLF_02008 0.0 D NLP P60 protein
PMCDCCLF_02009 8e-23
PMCDCCLF_02010 6.3e-64
PMCDCCLF_02011 6.9e-78 S Phage tail tube protein, TTP
PMCDCCLF_02012 1.9e-54
PMCDCCLF_02013 1.3e-88
PMCDCCLF_02014 4.5e-50
PMCDCCLF_02015 4.6e-52
PMCDCCLF_02017 2e-175 S Phage major capsid protein E
PMCDCCLF_02018 2.6e-50
PMCDCCLF_02019 2.7e-14 S Domain of unknown function (DUF4355)
PMCDCCLF_02021 2.4e-30
PMCDCCLF_02022 1.9e-295 S Phage Mu protein F like protein
PMCDCCLF_02023 3.8e-38 J Cysteine protease Prp
PMCDCCLF_02024 3.3e-267 S Phage portal protein, SPP1 Gp6-like
PMCDCCLF_02025 1.8e-239 ps334 S Terminase-like family
PMCDCCLF_02026 5.8e-57 ps333 L Terminase small subunit
PMCDCCLF_02028 8.1e-19
PMCDCCLF_02032 8.5e-81 arpU S Phage transcriptional regulator, ArpU family
PMCDCCLF_02034 2.4e-65 rusA 3.1.22.4 L Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
PMCDCCLF_02035 4.8e-64
PMCDCCLF_02036 6.3e-50
PMCDCCLF_02037 4.2e-148 3.1.3.16 L DnaD domain protein
PMCDCCLF_02038 1.4e-136 pi112 3.6.4.12 L PDDEXK-like domain of unknown function (DUF3799)
PMCDCCLF_02039 9.7e-150 recT L RecT family
PMCDCCLF_02040 1.1e-68
PMCDCCLF_02041 1.7e-07 S Domain of unknown function (DUF1508)
PMCDCCLF_02042 1.6e-75
PMCDCCLF_02043 2.9e-53
PMCDCCLF_02046 1.7e-25 K Cro/C1-type HTH DNA-binding domain
PMCDCCLF_02047 1.7e-37 K sequence-specific DNA binding
PMCDCCLF_02050 7.5e-22 S protein disulfide oxidoreductase activity
PMCDCCLF_02051 3.6e-09 S Pfam:Peptidase_M78
PMCDCCLF_02052 8.5e-11 S DNA/RNA non-specific endonuclease
PMCDCCLF_02055 6.1e-13
PMCDCCLF_02056 3.9e-11 M LysM domain
PMCDCCLF_02059 1.8e-21 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PMCDCCLF_02060 3.6e-26
PMCDCCLF_02061 3.3e-35 ycnE 3.1.1.29 S Antibiotic biosynthesis monooxygenase
PMCDCCLF_02065 1.7e-84
PMCDCCLF_02067 4.3e-219 int L Belongs to the 'phage' integrase family
PMCDCCLF_02069 8.9e-30
PMCDCCLF_02071 2e-38
PMCDCCLF_02072 1.4e-43
PMCDCCLF_02073 7.3e-83 K MarR family
PMCDCCLF_02074 0.0 bztC D nuclear chromosome segregation
PMCDCCLF_02075 3e-266 M MucBP domain
PMCDCCLF_02076 2.7e-16
PMCDCCLF_02077 7.2e-17
PMCDCCLF_02078 5.2e-15
PMCDCCLF_02079 1.1e-18
PMCDCCLF_02080 1.6e-16
PMCDCCLF_02081 1.6e-16
PMCDCCLF_02082 1.6e-16
PMCDCCLF_02083 1.9e-18
PMCDCCLF_02084 1.6e-16
PMCDCCLF_02085 0.0 msbA2 3.6.3.44 P ABC transporter transmembrane region
PMCDCCLF_02086 2.9e-274 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
PMCDCCLF_02087 0.0 macB3 V ABC transporter, ATP-binding protein
PMCDCCLF_02088 6.8e-24
PMCDCCLF_02089 1e-259 pgi 5.3.1.9 G Belongs to the GPI family
PMCDCCLF_02090 9.7e-155 glcU U sugar transport
PMCDCCLF_02091 9.4e-217 ywbD 2.1.1.191 J S-adenosylmethionine-dependent methyltransferase
PMCDCCLF_02092 2.9e-287 yclK 2.7.13.3 T Histidine kinase
PMCDCCLF_02093 8.9e-133 K response regulator
PMCDCCLF_02094 3e-243 XK27_08635 S UPF0210 protein
PMCDCCLF_02095 8.9e-38 gcvR T Belongs to the UPF0237 family
PMCDCCLF_02096 2e-169 EG EamA-like transporter family
PMCDCCLF_02099 6.2e-09
PMCDCCLF_02100 6.8e-17
PMCDCCLF_02101 5.7e-127 S Virulence-associated protein E
PMCDCCLF_02103 1e-20
PMCDCCLF_02104 2.1e-62 S Phage regulatory protein Rha (Phage_pRha)
PMCDCCLF_02105 7.7e-09
PMCDCCLF_02107 1.2e-107 sip L Phage integrase, N-terminal SAM-like domain
PMCDCCLF_02108 7.7e-92 S ECF-type riboflavin transporter, S component
PMCDCCLF_02109 8.6e-48
PMCDCCLF_02110 9.8e-214 yceI EGP Major facilitator Superfamily
PMCDCCLF_02111 1.9e-138 3.6.1.13, 3.6.1.55 F NUDIX domain
PMCDCCLF_02112 3.8e-23
PMCDCCLF_02114 1.1e-158 S Alpha/beta hydrolase of unknown function (DUF915)
PMCDCCLF_02115 2.8e-173 ykfC 3.4.14.13 M NlpC/P60 family
PMCDCCLF_02116 6.6e-81 K AsnC family
PMCDCCLF_02117 2e-35
PMCDCCLF_02118 7.8e-219 2.7.7.65 T diguanylate cyclase
PMCDCCLF_02119 7.8e-296 S ABC transporter, ATP-binding protein
PMCDCCLF_02120 2e-106 3.2.2.20 K acetyltransferase
PMCDCCLF_02121 5.8e-82 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PMCDCCLF_02122 2.7e-39
PMCDCCLF_02123 0.0 nagE 2.7.1.193, 2.7.1.199, 2.7.1.211 G phosphotransferase system, EIIB
PMCDCCLF_02124 3.4e-188 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PMCDCCLF_02125 5e-162 degV S Uncharacterised protein, DegV family COG1307
PMCDCCLF_02126 7.3e-231 hom1 1.1.1.3 E Homoserine dehydrogenase
PMCDCCLF_02127 2.6e-244 metY 2.5.1.49 E Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
PMCDCCLF_02128 3.6e-165 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PMCDCCLF_02129 1.4e-176 XK27_08835 S ABC transporter
PMCDCCLF_02130 8.7e-154 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PMCDCCLF_02131 6.4e-137 XK27_08845 S ABC transporter, ATP-binding protein
PMCDCCLF_02132 3.7e-257 npr 1.11.1.1 C NADH oxidase
PMCDCCLF_02133 1.5e-158 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
PMCDCCLF_02134 4.8e-137 terC P membrane
PMCDCCLF_02135 2.4e-85 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PMCDCCLF_02136 5.9e-202 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PMCDCCLF_02137 7.6e-52 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
PMCDCCLF_02138 2.5e-58 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PMCDCCLF_02139 3.8e-134 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PMCDCCLF_02140 3.5e-129 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PMCDCCLF_02141 4.1e-110 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PMCDCCLF_02142 7.9e-108 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
PMCDCCLF_02143 1.2e-233 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PMCDCCLF_02144 4.3e-118 hisG 2.4.2.17 F Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PMCDCCLF_02145 1.3e-215 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PMCDCCLF_02146 1.7e-164 hisK 3.1.3.15 E Histidinol phosphate phosphatase, HisJ
PMCDCCLF_02147 1.8e-215 ysaA V RDD family
PMCDCCLF_02148 9.9e-166 corA P CorA-like Mg2+ transporter protein
PMCDCCLF_02149 2.1e-55 S Domain of unknown function (DU1801)
PMCDCCLF_02150 5.9e-91 rmeB K transcriptional regulator, MerR family
PMCDCCLF_02151 1.4e-147 GM Belongs to the short-chain dehydrogenases reductases (SDR) family
PMCDCCLF_02152 3.3e-97 J glyoxalase III activity
PMCDCCLF_02153 6.7e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PMCDCCLF_02154 1.1e-186 pva3 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PMCDCCLF_02155 3.7e-34
PMCDCCLF_02156 9.2e-112 S Protein of unknown function (DUF1211)
PMCDCCLF_02157 0.0 ydgH S MMPL family
PMCDCCLF_02158 4.7e-288 M domain protein
PMCDCCLF_02159 1.1e-74 yjcF S Acetyltransferase (GNAT) domain
PMCDCCLF_02160 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PMCDCCLF_02161 0.0 glpQ 3.1.4.46 C phosphodiesterase
PMCDCCLF_02162 2.3e-184 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
PMCDCCLF_02163 5.8e-143 S Alpha/beta hydrolase of unknown function (DUF915)
PMCDCCLF_02164 7.1e-183 3.6.4.13 S domain, Protein
PMCDCCLF_02165 3.6e-168 S Polyphosphate kinase 2 (PPK2)
PMCDCCLF_02166 2.7e-97 drgA C Nitroreductase family
PMCDCCLF_02167 3.1e-178 iunH2 3.2.2.1 F nucleoside hydrolase
PMCDCCLF_02168 5.8e-150 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PMCDCCLF_02169 8.8e-123 S Sucrose-6F-phosphate phosphohydrolase
PMCDCCLF_02170 6.7e-157 ccpB 5.1.1.1 K lacI family
PMCDCCLF_02171 8.1e-117 K Helix-turn-helix domain, rpiR family
PMCDCCLF_02172 2.5e-175 S Oxidoreductase family, NAD-binding Rossmann fold
PMCDCCLF_02173 5.9e-199 yhhX 1.1.1.371 S Oxidoreductase family, C-terminal alpha/beta domain
PMCDCCLF_02174 0.0 yjcE P Sodium proton antiporter
PMCDCCLF_02175 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PMCDCCLF_02176 3.7e-107 pncA Q Isochorismatase family
PMCDCCLF_02177 2.7e-132
PMCDCCLF_02178 5.1e-125 skfE V ABC transporter
PMCDCCLF_02179 9.5e-65 yvoA_1 K Transcriptional regulator, GntR family
PMCDCCLF_02180 1.2e-45 S Enterocin A Immunity
PMCDCCLF_02181 5.3e-175 D Alpha beta
PMCDCCLF_02182 0.0 pepF2 E Oligopeptidase F
PMCDCCLF_02183 1.3e-72 K Transcriptional regulator
PMCDCCLF_02184 3e-164
PMCDCCLF_02185 1.3e-57
PMCDCCLF_02186 2.2e-47
PMCDCCLF_02187 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PMCDCCLF_02188 1.2e-67
PMCDCCLF_02189 8.4e-145 yjfP S Dienelactone hydrolase family
PMCDCCLF_02190 2.3e-56 dsbJ 2.7.1.180, 5.3.4.1 CO Thioredoxin
PMCDCCLF_02191 9.3e-206 metB 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PMCDCCLF_02192 5.2e-47
PMCDCCLF_02193 6.1e-43
PMCDCCLF_02194 5e-82 yybC S Protein of unknown function (DUF2798)
PMCDCCLF_02195 1.7e-73
PMCDCCLF_02196 4e-60
PMCDCCLF_02197 1.5e-194 lplA 6.3.1.20 H Lipoate-protein ligase
PMCDCCLF_02198 0.0 acm2 3.2.1.17 NU Bacterial SH3 domain
PMCDCCLF_02199 1.4e-78 uspA T universal stress protein
PMCDCCLF_02200 8.7e-154 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PMCDCCLF_02201 5.7e-20
PMCDCCLF_02202 4.2e-44 S zinc-ribbon domain
PMCDCCLF_02203 3.7e-69 S response to antibiotic
PMCDCCLF_02204 1.7e-48 K Cro/C1-type HTH DNA-binding domain
PMCDCCLF_02205 5.6e-21 S Protein of unknown function (DUF2929)
PMCDCCLF_02206 9.4e-225 lsgC M Glycosyl transferases group 1
PMCDCCLF_02207 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PMCDCCLF_02208 4.8e-162 S Putative esterase
PMCDCCLF_02209 2.4e-130 gntR2 K Transcriptional regulator
PMCDCCLF_02210 5.8e-91 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PMCDCCLF_02211 5.8e-138
PMCDCCLF_02212 3.1e-116 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PMCDCCLF_02213 5.5e-138 rrp8 K LytTr DNA-binding domain
PMCDCCLF_02214 4.2e-92 M1-874 K Domain of unknown function (DUF1836)
PMCDCCLF_02215 7.7e-61
PMCDCCLF_02216 9.8e-25 hspX O Belongs to the small heat shock protein (HSP20) family
PMCDCCLF_02217 4.4e-58
PMCDCCLF_02218 1.2e-239 yhdP S Transporter associated domain
PMCDCCLF_02219 4.9e-87 nrdI F Belongs to the NrdI family
PMCDCCLF_02220 2.9e-269 yjcE P Sodium proton antiporter
PMCDCCLF_02221 1.8e-212 yttB EGP Major facilitator Superfamily
PMCDCCLF_02222 2.5e-62 K helix_turn_helix, mercury resistance
PMCDCCLF_02223 2.5e-172 C Zinc-binding dehydrogenase
PMCDCCLF_02224 8.5e-57 S SdpI/YhfL protein family
PMCDCCLF_02225 6.3e-295 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PMCDCCLF_02226 2.7e-260 gabR K Bacterial regulatory proteins, gntR family
PMCDCCLF_02227 4.2e-217 patA 2.6.1.1 E Aminotransferase
PMCDCCLF_02228 7.8e-160 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PMCDCCLF_02229 3e-18
PMCDCCLF_02230 1.7e-126 S membrane transporter protein
PMCDCCLF_02231 1.9e-161 mleR K LysR family
PMCDCCLF_02232 5.6e-115 ylbE GM NAD(P)H-binding
PMCDCCLF_02233 8.2e-96 wecD K Acetyltransferase (GNAT) family
PMCDCCLF_02234 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PMCDCCLF_02235 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PMCDCCLF_02236 4.6e-169 ydcZ S Putative inner membrane exporter, YdcZ
PMCDCCLF_02237 1.4e-113 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PMCDCCLF_02238 1.8e-125 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PMCDCCLF_02239 9.7e-169 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PMCDCCLF_02240 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PMCDCCLF_02241 1.5e-213 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PMCDCCLF_02242 1.5e-244 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PMCDCCLF_02243 1.2e-171 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PMCDCCLF_02244 1.1e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PMCDCCLF_02245 3.9e-298 pucR QT Purine catabolism regulatory protein-like family
PMCDCCLF_02246 3.5e-236 pbuX F xanthine permease
PMCDCCLF_02247 2.4e-221 pbuG S Permease family
PMCDCCLF_02248 3.9e-162 GM NmrA-like family
PMCDCCLF_02249 6.5e-156 T EAL domain
PMCDCCLF_02250 2.6e-94
PMCDCCLF_02251 4.6e-252 pgaC GT2 M Glycosyl transferase
PMCDCCLF_02252 6.9e-124 2.1.1.14 E Methionine synthase
PMCDCCLF_02253 6.4e-216 purD 6.3.4.13 F Belongs to the GARS family
PMCDCCLF_02254 7.3e-286 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PMCDCCLF_02255 2.4e-101 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PMCDCCLF_02256 9.4e-189 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PMCDCCLF_02257 1.1e-280 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PMCDCCLF_02258 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PMCDCCLF_02259 2e-126 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PMCDCCLF_02260 3.6e-41 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PMCDCCLF_02261 2.9e-131 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PMCDCCLF_02262 1.9e-211 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PMCDCCLF_02263 1.7e-79 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PMCDCCLF_02264 1.5e-223 XK27_09615 1.3.5.4 S reductase
PMCDCCLF_02265 1.8e-110 XK27_09620 1.3.5.4 S NADPH-dependent FMN reductase
PMCDCCLF_02266 1.4e-189 lplA2 6.3.1.20 H Bacterial lipoate protein ligase C-terminus
PMCDCCLF_02267 1.2e-146 ptp3 3.1.3.48 T Tyrosine phosphatase family
PMCDCCLF_02268 1.9e-118 cah 4.2.1.1 P Eukaryotic-type carbonic anhydrase
PMCDCCLF_02269 1.1e-147 S Alpha/beta hydrolase of unknown function (DUF915)
PMCDCCLF_02270 1.5e-180 ansA 3.5.1.1 EJ Asparaginase
PMCDCCLF_02271 1.7e-139 cysA V ABC transporter, ATP-binding protein
PMCDCCLF_02272 0.0 V FtsX-like permease family
PMCDCCLF_02273 8e-42
PMCDCCLF_02274 7.9e-61 gntR1 K Transcriptional regulator, GntR family
PMCDCCLF_02275 6.9e-164 V ABC transporter, ATP-binding protein
PMCDCCLF_02276 2.9e-148
PMCDCCLF_02277 2.5e-80 uspA T universal stress protein
PMCDCCLF_02278 1.2e-35
PMCDCCLF_02279 4.2e-71 gtcA S Teichoic acid glycosylation protein
PMCDCCLF_02280 3.3e-88
PMCDCCLF_02281 2.1e-49
PMCDCCLF_02283 1.7e-234 malY 4.4.1.8 E Aminotransferase, class I
PMCDCCLF_02284 7.3e-86 2.7.7.1, 3.6.1.55 F belongs to the nudix hydrolase family
PMCDCCLF_02285 5.4e-118
PMCDCCLF_02286 1.5e-52
PMCDCCLF_02288 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PMCDCCLF_02289 1.5e-280 thrC 4.2.3.1 E Threonine synthase
PMCDCCLF_02290 8.5e-145 XK27_02985 S Sucrose-6F-phosphate phosphohydrolase
PMCDCCLF_02291 9.8e-11 mcbG S Pentapeptide repeats (8 copies)
PMCDCCLF_02292 1.7e-111 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PMCDCCLF_02293 3.1e-101 3.6.1.13 L Belongs to the Nudix hydrolase family
PMCDCCLF_02294 7.8e-69 FG Scavenger mRNA decapping enzyme C-term binding
PMCDCCLF_02295 7.5e-135 IQ Enoyl-(Acyl carrier protein) reductase
PMCDCCLF_02296 1.8e-36 XK27_01315 S Protein of unknown function (DUF2829)
PMCDCCLF_02297 3.8e-212 S Bacterial protein of unknown function (DUF871)
PMCDCCLF_02298 2.1e-232 S Sterol carrier protein domain
PMCDCCLF_02299 3.6e-88 niaR S 3H domain
PMCDCCLF_02300 8.6e-265 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PMCDCCLF_02301 1.3e-117 K Transcriptional regulator
PMCDCCLF_02302 3.2e-154 V ABC transporter
PMCDCCLF_02303 8.2e-134 V AAA domain, putative AbiEii toxin, Type IV TA system
PMCDCCLF_02304 1.1e-245 dsdA 4.3.1.18 E Belongs to the serine threonine dehydratase family. DsdA subfamily
PMCDCCLF_02305 1.8e-294 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PMCDCCLF_02306 9.5e-296 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PMCDCCLF_02307 5.1e-54 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
PMCDCCLF_02308 2.3e-48 pts20B 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PMCDCCLF_02309 6.8e-130 gntR K UTRA
PMCDCCLF_02310 6.8e-141 epsV 2.7.8.12 S glycosyl transferase family 2
PMCDCCLF_02311 6.5e-122 pgm7 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PMCDCCLF_02312 1.8e-81
PMCDCCLF_02313 9.8e-152 S hydrolase
PMCDCCLF_02314 6.5e-182 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PMCDCCLF_02315 8.3e-152 EG EamA-like transporter family
PMCDCCLF_02316 1.3e-176 pdxB 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PMCDCCLF_02317 1.2e-100 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
PMCDCCLF_02318 1.5e-233
PMCDCCLF_02319 1.1e-77 fld C Flavodoxin
PMCDCCLF_02320 0.0 M Bacterial Ig-like domain (group 3)
PMCDCCLF_02321 0.0 M Bacterial surface protein 26-residue PARCEL repeat (3 repeats)
PMCDCCLF_02322 2.7e-32
PMCDCCLF_02323 6.1e-129 aroD 1.1.1.25, 4.2.1.10 E Type I 3-dehydroquinase
PMCDCCLF_02324 7.6e-269 ycaM E amino acid
PMCDCCLF_02325 7.9e-79 K Winged helix DNA-binding domain
PMCDCCLF_02326 3.3e-166 S Oxidoreductase, aldo keto reductase family protein
PMCDCCLF_02327 5.7e-163 akr5f 1.1.1.346 S reductase
PMCDCCLF_02328 4.6e-163 K Transcriptional regulator
PMCDCCLF_02330 1.5e-42 S COG NOG38524 non supervised orthologous group
PMCDCCLF_02331 1.8e-84 hmpT S Pfam:DUF3816
PMCDCCLF_02332 1.5e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PMCDCCLF_02333 1e-111
PMCDCCLF_02334 4e-152 M Glycosyl hydrolases family 25
PMCDCCLF_02335 2e-143 yvpB S Peptidase_C39 like family
PMCDCCLF_02336 1.1e-92 yueI S Protein of unknown function (DUF1694)
PMCDCCLF_02337 1.6e-115 S Protein of unknown function (DUF554)
PMCDCCLF_02338 6.4e-148 KT helix_turn_helix, mercury resistance
PMCDCCLF_02339 1.7e-227 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PMCDCCLF_02340 6.6e-95 S Protein of unknown function (DUF1440)
PMCDCCLF_02341 5.2e-174 hrtB V ABC transporter permease
PMCDCCLF_02342 5.6e-121 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PMCDCCLF_02343 3.7e-91 2.7.7.65 T phosphorelay sensor kinase activity
PMCDCCLF_02344 2.7e-185 iunH 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PMCDCCLF_02345 8.1e-99 1.5.1.3 H RibD C-terminal domain
PMCDCCLF_02346 4.1e-188 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PMCDCCLF_02347 9.8e-110 S Membrane
PMCDCCLF_02348 1.2e-155 mleP3 S Membrane transport protein
PMCDCCLF_02349 8.5e-257 aspA 4.2.1.2, 4.3.1.1 E Fumarase C C-terminus
PMCDCCLF_02350 4.2e-180 ynfM EGP Major facilitator Superfamily
PMCDCCLF_02351 1.9e-126 hadL 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PMCDCCLF_02352 2.4e-270 lmrB EGP Major facilitator Superfamily
PMCDCCLF_02353 1.4e-76 S Domain of unknown function (DUF4811)
PMCDCCLF_02354 0.0 L Transposase
PMCDCCLF_02355 2.1e-102 rimL J Acetyltransferase (GNAT) domain
PMCDCCLF_02356 9.3e-173 S Conserved hypothetical protein 698
PMCDCCLF_02357 3.7e-151 rlrG K Transcriptional regulator
PMCDCCLF_02358 2.4e-297 tagE5 2.4.1.52 GT4 M Poly(Glycerol-phosphate) alpha-glucosyltransferase
PMCDCCLF_02359 1.8e-268 tagE6 2.4.1.52 GT4 M Glycosyl transferases group 1
PMCDCCLF_02360 1.6e-33 lytE M LysM domain protein
PMCDCCLF_02361 7e-54 lytE M LysM domain
PMCDCCLF_02362 5.2e-92 ogt 2.1.1.63 L Methyltransferase
PMCDCCLF_02363 3.6e-168 natA S ABC transporter, ATP-binding protein
PMCDCCLF_02364 4.7e-211 natB CP ABC-2 family transporter protein
PMCDCCLF_02365 1.2e-97 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PMCDCCLF_02366 4.5e-19 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PMCDCCLF_02367 2.5e-55 yphJ 4.1.1.44 S Carboxymuconolactone decarboxylase family
PMCDCCLF_02368 9.3e-76 yphH S Cupin domain
PMCDCCLF_02369 1.7e-78 K transcriptional regulator, MerR family
PMCDCCLF_02370 2.3e-237 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PMCDCCLF_02371 0.0 ylbB V ABC transporter permease
PMCDCCLF_02372 3.7e-120 macB V ABC transporter, ATP-binding protein
PMCDCCLF_02374 8e-117 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PMCDCCLF_02375 2.2e-100 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PMCDCCLF_02376 8.4e-116 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PMCDCCLF_02377 2.4e-83
PMCDCCLF_02378 7.3e-86 yvbK 3.1.3.25 K GNAT family
PMCDCCLF_02379 7e-37
PMCDCCLF_02380 8.2e-48
PMCDCCLF_02381 1.2e-112 pgm8 G Histidine phosphatase superfamily (branch 1)
PMCDCCLF_02382 8.4e-60 S Domain of unknown function (DUF4440)
PMCDCCLF_02383 2.8e-157 K LysR substrate binding domain
PMCDCCLF_02384 1.2e-103 GM NAD(P)H-binding
PMCDCCLF_02385 2.3e-195 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PMCDCCLF_02386 3.2e-150 IQ Enoyl-(Acyl carrier protein) reductase
PMCDCCLF_02387 1.1e-142 aRA11 1.1.1.346 S reductase
PMCDCCLF_02388 1.3e-81 yiiE S Protein of unknown function (DUF1211)
PMCDCCLF_02389 6.5e-77 darA C Flavodoxin
PMCDCCLF_02390 3e-126 IQ reductase
PMCDCCLF_02391 4.9e-82 glcU U sugar transport
PMCDCCLF_02392 1.3e-87 GM NAD(P)H-binding
PMCDCCLF_02393 5.6e-105 akr5f 1.1.1.346 S reductase
PMCDCCLF_02394 2e-78 K Transcriptional regulator
PMCDCCLF_02396 3e-25 fldA C Flavodoxin
PMCDCCLF_02397 4.4e-10 adhR K helix_turn_helix, mercury resistance
PMCDCCLF_02398 2.5e-114 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PMCDCCLF_02399 1.3e-130 C Aldo keto reductase
PMCDCCLF_02400 9.4e-142 akr5f 1.1.1.346 S reductase
PMCDCCLF_02401 1.3e-142 EGP Major Facilitator Superfamily
PMCDCCLF_02402 5.7e-83 GM NAD(P)H-binding
PMCDCCLF_02403 6.1e-76 T Belongs to the universal stress protein A family
PMCDCCLF_02404 5.8e-95 maa 2.3.1.18, 2.3.1.79 S Maltose O-acetyltransferase
PMCDCCLF_02405 1.1e-124 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PMCDCCLF_02406 1.5e-81
PMCDCCLF_02407 3.9e-102 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
PMCDCCLF_02408 5.7e-222 patB 4.4.1.8 E Aminotransferase, class I
PMCDCCLF_02409 9.7e-102 M Protein of unknown function (DUF3737)
PMCDCCLF_02410 6.3e-193 C Aldo/keto reductase family
PMCDCCLF_02412 0.0 mdlB V ABC transporter
PMCDCCLF_02413 0.0 mdlA V ABC transporter
PMCDCCLF_02414 7.4e-245 EGP Major facilitator Superfamily
PMCDCCLF_02416 6.4e-08
PMCDCCLF_02417 3.9e-175 yhgE V domain protein
PMCDCCLF_02418 1.1e-95 K Transcriptional regulator (TetR family)
PMCDCCLF_02419 1.4e-53 K helix_turn_helix, Arsenical Resistance Operon Repressor
PMCDCCLF_02420 8.8e-141 endA F DNA RNA non-specific endonuclease
PMCDCCLF_02421 2.1e-102 speG J Acetyltransferase (GNAT) domain
PMCDCCLF_02422 5.7e-97 2.3.1.128 J Acetyltransferase (GNAT) domain
PMCDCCLF_02423 1.7e-221 S CAAX protease self-immunity
PMCDCCLF_02424 3.2e-308 ybiT S ABC transporter, ATP-binding protein
PMCDCCLF_02425 5.3e-147 3.1.3.102, 3.1.3.104 S hydrolase
PMCDCCLF_02426 0.0 S Predicted membrane protein (DUF2207)
PMCDCCLF_02427 0.0 uvrA3 L excinuclease ABC
PMCDCCLF_02428 4.8e-208 EGP Major facilitator Superfamily
PMCDCCLF_02429 2.4e-172 ropB K Helix-turn-helix XRE-family like proteins
PMCDCCLF_02430 2.6e-233 yxiO S Vacuole effluxer Atg22 like
PMCDCCLF_02431 1.6e-254 npp S type I phosphodiesterase nucleotide pyrophosphatase
PMCDCCLF_02432 2e-160 I alpha/beta hydrolase fold
PMCDCCLF_02433 7e-130 treR K UTRA
PMCDCCLF_02434 1.6e-237
PMCDCCLF_02435 5.6e-39 S Cytochrome B5
PMCDCCLF_02436 8.3e-88 pts21A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PMCDCCLF_02437 6.2e-218 2.7.7.65 T Diguanylate cyclase, GGDEF domain
PMCDCCLF_02438 3.1e-127 yliE T EAL domain
PMCDCCLF_02439 2.2e-104 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PMCDCCLF_02440 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PMCDCCLF_02441 2e-80
PMCDCCLF_02442 4.5e-73 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PMCDCCLF_02443 6.8e-192 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PMCDCCLF_02444 1.5e-191 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PMCDCCLF_02445 4.9e-22
PMCDCCLF_02446 2.1e-57
PMCDCCLF_02447 2.2e-165 K LysR substrate binding domain
PMCDCCLF_02448 2.4e-243 P Sodium:sulfate symporter transmembrane region
PMCDCCLF_02449 3.7e-287 ubiD 4.1.1.98 H 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
PMCDCCLF_02450 6e-266 S response to antibiotic
PMCDCCLF_02451 8.8e-136 S zinc-ribbon domain
PMCDCCLF_02453 3.2e-37
PMCDCCLF_02454 2.7e-137 aroD S Alpha/beta hydrolase family
PMCDCCLF_02455 5.2e-177 S Phosphotransferase system, EIIC
PMCDCCLF_02456 9.7e-269 I acetylesterase activity
PMCDCCLF_02457 5e-212 sdrF M Collagen binding domain
PMCDCCLF_02458 1.1e-159 yicL EG EamA-like transporter family
PMCDCCLF_02459 4.4e-129 E lipolytic protein G-D-S-L family
PMCDCCLF_02460 7.5e-177 4.1.1.52 S Amidohydrolase
PMCDCCLF_02461 2.1e-111 K Transcriptional regulator C-terminal region
PMCDCCLF_02462 1.4e-47 3.6.4.12 K HxlR-like helix-turn-helix
PMCDCCLF_02463 2.9e-162 ypbG 2.7.1.2 GK ROK family
PMCDCCLF_02464 0.0 lmrA 3.6.3.44 V ABC transporter
PMCDCCLF_02465 2.9e-96 rmaB K Transcriptional regulator, MarR family
PMCDCCLF_02466 5e-119 drgA C Nitroreductase family
PMCDCCLF_02467 0.0 nagE 2.7.1.193, 2.7.1.199, 2.7.1.211 G phosphotransferase system, EIIB
PMCDCCLF_02468 8.1e-109 cmpC S ATPases associated with a variety of cellular activities
PMCDCCLF_02469 2.4e-152 WQ51_06230 U Belongs to the binding-protein-dependent transport system permease family
PMCDCCLF_02470 3.5e-169 XK27_00670 S ABC transporter
PMCDCCLF_02471 1e-260
PMCDCCLF_02472 8.2e-61
PMCDCCLF_02473 3.6e-188 S Cell surface protein
PMCDCCLF_02474 1e-91 S WxL domain surface cell wall-binding
PMCDCCLF_02475 2.4e-97 acuB S Domain in cystathionine beta-synthase and other proteins.
PMCDCCLF_02476 9.5e-124 livF E ABC transporter
PMCDCCLF_02477 1.8e-139 livG E Branched-chain amino acid ATP-binding cassette transporter
PMCDCCLF_02478 9e-141 livM E Branched-chain amino acid transport system / permease component
PMCDCCLF_02479 6.5e-154 livH U Branched-chain amino acid transport system / permease component
PMCDCCLF_02480 4.7e-163 livJ E Receptor family ligand binding region
PMCDCCLF_02481 9.7e-37 livJ E Receptor family ligand binding region
PMCDCCLF_02483 7e-33
PMCDCCLF_02484 1.7e-113 zmp3 O Zinc-dependent metalloprotease
PMCDCCLF_02485 3.1e-81 gtrA S GtrA-like protein
PMCDCCLF_02486 1.6e-122 K Helix-turn-helix XRE-family like proteins
PMCDCCLF_02487 4.1e-284 mntH P H( )-stimulated, divalent metal cation uptake system
PMCDCCLF_02488 6.8e-72 T Belongs to the universal stress protein A family
PMCDCCLF_02489 1.1e-46
PMCDCCLF_02490 1.9e-116 S SNARE associated Golgi protein
PMCDCCLF_02491 1.9e-47 K Transcriptional regulator, ArsR family
PMCDCCLF_02492 1.6e-92 cadD P Cadmium resistance transporter
PMCDCCLF_02493 0.0 yhcA V ABC transporter, ATP-binding protein
PMCDCCLF_02494 0.0 P Concanavalin A-like lectin/glucanases superfamily
PMCDCCLF_02495 7.4e-64
PMCDCCLF_02496 3.4e-160 T Calcineurin-like phosphoesterase superfamily domain
PMCDCCLF_02497 3.2e-55
PMCDCCLF_02498 5.3e-150 dicA K Helix-turn-helix domain
PMCDCCLF_02499 8.8e-75 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PMCDCCLF_02500 7e-53 ptcB 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PMCDCCLF_02501 3.3e-267 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMCDCCLF_02502 2e-279 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PMCDCCLF_02503 1.7e-185 1.1.1.219 GM Male sterility protein
PMCDCCLF_02504 5.1e-75 K helix_turn_helix, mercury resistance
PMCDCCLF_02505 2.3e-65 M LysM domain
PMCDCCLF_02506 4.1e-92 M Lysin motif
PMCDCCLF_02507 4e-107 S SdpI/YhfL protein family
PMCDCCLF_02508 1.8e-54 nudA S ASCH
PMCDCCLF_02509 9.1e-164 psaA P Belongs to the bacterial solute-binding protein 9 family
PMCDCCLF_02510 9.4e-92
PMCDCCLF_02511 2.6e-120 tag 3.2.2.20 L Methyladenine glycosylase
PMCDCCLF_02512 3.3e-219 T diguanylate cyclase
PMCDCCLF_02513 1.2e-73 S Psort location Cytoplasmic, score
PMCDCCLF_02514 7.5e-283 dinB 2.7.7.7 L impB/mucB/samB family C-terminal domain
PMCDCCLF_02515 1.2e-166 K Bacterial regulatory helix-turn-helix protein, lysR family
PMCDCCLF_02516 6e-73
PMCDCCLF_02517 3.8e-131 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PMCDCCLF_02518 1.6e-175 C C4-dicarboxylate transmembrane transporter activity
PMCDCCLF_02519 1.6e-117 GM NAD(P)H-binding
PMCDCCLF_02520 4.7e-93 S Phosphatidylethanolamine-binding protein
PMCDCCLF_02521 2.7e-78 yphH S Cupin domain
PMCDCCLF_02522 3.7e-60 I sulfurtransferase activity
PMCDCCLF_02523 2.7e-67 IQ reductase
PMCDCCLF_02524 1.7e-54 IQ reductase
PMCDCCLF_02525 4e-116 GM NAD(P)H-binding
PMCDCCLF_02526 8.6e-218 ykiI
PMCDCCLF_02527 0.0 V ABC transporter
PMCDCCLF_02528 4.8e-311 XK27_09600 V ABC transporter, ATP-binding protein
PMCDCCLF_02529 9.1e-177 O protein import
PMCDCCLF_02530 1.3e-229 amd 3.5.1.47 E Peptidase family M20/M25/M40
PMCDCCLF_02531 5e-162 IQ KR domain
PMCDCCLF_02533 1.4e-69
PMCDCCLF_02534 1.5e-144 K Helix-turn-helix XRE-family like proteins
PMCDCCLF_02535 2.8e-266 yjeM E Amino Acid
PMCDCCLF_02536 3.9e-66 lysM M LysM domain
PMCDCCLF_02537 1.3e-223 dhaT 1.1.1.1, 1.1.1.202 C Dehydrogenase
PMCDCCLF_02538 5.4e-214 adhC 1.1.1.90 C Zn-dependent alcohol dehydrogenases, class III
PMCDCCLF_02539 0.0 ctpA 3.6.3.54 P P-type ATPase
PMCDCCLF_02540 8.3e-44 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PMCDCCLF_02541 2.4e-65 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PMCDCCLF_02542 0.0 M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PMCDCCLF_02543 6e-140 K Helix-turn-helix domain
PMCDCCLF_02544 2.9e-38 S TfoX C-terminal domain
PMCDCCLF_02545 1.3e-227 hpk9 2.7.13.3 T GHKL domain
PMCDCCLF_02546 8.4e-263
PMCDCCLF_02547 3.8e-75
PMCDCCLF_02548 4e-182 S Cell surface protein
PMCDCCLF_02549 1.7e-101 S WxL domain surface cell wall-binding
PMCDCCLF_02550 5.5e-124 1.6.5.5 C Alcohol dehydrogenase GroES-like domain
PMCDCCLF_02551 1.6e-42 1.6.5.5 C Alcohol dehydrogenase GroES-like domain
PMCDCCLF_02552 9.3e-68 S Iron-sulphur cluster biosynthesis
PMCDCCLF_02553 6.6e-116 S GyrI-like small molecule binding domain
PMCDCCLF_02554 4.3e-189 S Cell surface protein
PMCDCCLF_02556 2e-101 S WxL domain surface cell wall-binding
PMCDCCLF_02557 1.1e-62
PMCDCCLF_02558 1.8e-218 NU Mycoplasma protein of unknown function, DUF285
PMCDCCLF_02559 5.9e-117
PMCDCCLF_02560 3e-116 S Haloacid dehalogenase-like hydrolase
PMCDCCLF_02561 2e-61 K Transcriptional regulator, HxlR family
PMCDCCLF_02562 4.9e-213 ytbD EGP Major facilitator Superfamily
PMCDCCLF_02563 1.4e-94 M ErfK YbiS YcfS YnhG
PMCDCCLF_02564 0.0 asnB 6.3.5.4 E Asparagine synthase
PMCDCCLF_02565 1.7e-134 K LytTr DNA-binding domain
PMCDCCLF_02566 4.3e-204 2.7.13.3 T GHKL domain
PMCDCCLF_02567 7.9e-100 fadR K Bacterial regulatory proteins, tetR family
PMCDCCLF_02568 2.8e-168 GM NmrA-like family
PMCDCCLF_02569 9.1e-267 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
PMCDCCLF_02570 1.7e-212 M Glycosyl hydrolases family 25
PMCDCCLF_02571 3.8e-101 M Glycosyl hydrolases family 25
PMCDCCLF_02572 1e-47 S Domain of unknown function (DUF1905)
PMCDCCLF_02573 1.4e-62 hxlR K HxlR-like helix-turn-helix
PMCDCCLF_02574 9.8e-132 ydfG S KR domain
PMCDCCLF_02575 4e-96 K Bacterial regulatory proteins, tetR family
PMCDCCLF_02576 1.2e-191 1.1.1.219 GM Male sterility protein
PMCDCCLF_02577 4.1e-101 S Protein of unknown function (DUF1211)
PMCDCCLF_02578 1.5e-180 S Aldo keto reductase
PMCDCCLF_02579 1.6e-253 yfjF U Sugar (and other) transporter
PMCDCCLF_02580 3.7e-108 K Bacterial regulatory proteins, tetR family
PMCDCCLF_02581 4e-170 fhuD P Periplasmic binding protein
PMCDCCLF_02582 1.1e-144 fhuC 3.6.3.34 HP ABC transporter
PMCDCCLF_02583 1.1e-176 sirB U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PMCDCCLF_02584 5.6e-170 fhuG U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PMCDCCLF_02585 5.4e-92 K Bacterial regulatory proteins, tetR family
PMCDCCLF_02586 2.9e-162 GM NmrA-like family
PMCDCCLF_02587 2.5e-130 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PMCDCCLF_02588 1.3e-68 maa S transferase hexapeptide repeat
PMCDCCLF_02589 3.4e-152 IQ Enoyl-(Acyl carrier protein) reductase
PMCDCCLF_02590 1.6e-64 K helix_turn_helix, mercury resistance
PMCDCCLF_02591 0.0 pelX UW LPXTG-motif cell wall anchor domain protein
PMCDCCLF_02592 6.1e-15 S Bacterial protein of unknown function (DUF916)
PMCDCCLF_02593 4.2e-136 S Bacterial protein of unknown function (DUF916)
PMCDCCLF_02594 4.3e-90 S WxL domain surface cell wall-binding
PMCDCCLF_02595 5.4e-189 NU Mycoplasma protein of unknown function, DUF285
PMCDCCLF_02596 2.1e-117 K Bacterial regulatory proteins, tetR family
PMCDCCLF_02597 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PMCDCCLF_02598 1.3e-290 yjcE P Sodium proton antiporter
PMCDCCLF_02599 1.5e-152 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
PMCDCCLF_02600 7.9e-163 K LysR substrate binding domain
PMCDCCLF_02601 1.7e-284 1.3.5.4 C FAD binding domain
PMCDCCLF_02602 0.0 3.2.1.4, 3.2.1.78, 3.2.1.8 GH26,GH5,GH9 S MucBP domain
PMCDCCLF_02603 1.7e-84 dps P Belongs to the Dps family
PMCDCCLF_02604 1.9e-30
PMCDCCLF_02606 1.9e-147 licT2 K CAT RNA binding domain
PMCDCCLF_02607 3.8e-292 arbB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PMCDCCLF_02608 0.0 bglF 2.7.1.193, 2.7.1.211 G phosphotransferase system
PMCDCCLF_02609 1.1e-65 S Protein of unknown function (DUF1093)
PMCDCCLF_02610 0.0 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PMCDCCLF_02611 5.8e-234 ulaA 2.7.1.194 S PTS system sugar-specific permease component
PMCDCCLF_02612 1.4e-47 ulaB 2.7.1.194, 2.7.1.200 G protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
PMCDCCLF_02613 0.0 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PMCDCCLF_02614 2e-209 S Membrane
PMCDCCLF_02615 6.5e-44 S Protein of unknown function (DUF3781)
PMCDCCLF_02616 2.7e-108 ydeA S intracellular protease amidase
PMCDCCLF_02617 1.5e-42 K HxlR-like helix-turn-helix
PMCDCCLF_02618 7.2e-42 C Alcohol dehydrogenase GroES-like domain
PMCDCCLF_02619 4.2e-95 C Alcohol dehydrogenase GroES-like domain
PMCDCCLF_02620 5.8e-205 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
PMCDCCLF_02622 8.1e-84 3.2.1.17, 3.5.1.28 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PMCDCCLF_02623 4.2e-71 3.2.1.17, 3.4.17.14, 3.5.1.28 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PMCDCCLF_02624 1.2e-104 M ErfK YbiS YcfS YnhG
PMCDCCLF_02625 2.3e-101 akr5f 1.1.1.346 S reductase
PMCDCCLF_02626 4.6e-35 S aldo-keto reductase (NADP) activity
PMCDCCLF_02627 3.3e-109 GM NAD(P)H-binding
PMCDCCLF_02628 2.2e-78 3.5.4.1 GM SnoaL-like domain
PMCDCCLF_02629 6.5e-260 qacA EGP Fungal trichothecene efflux pump (TRI12)
PMCDCCLF_02630 2.7e-64 S Domain of unknown function (DUF4440)
PMCDCCLF_02631 2.4e-104 K Bacterial regulatory proteins, tetR family
PMCDCCLF_02633 6.8e-33 L transposase activity
PMCDCCLF_02635 8.8e-40
PMCDCCLF_02636 7.9e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PMCDCCLF_02637 1.9e-171 K AI-2E family transporter
PMCDCCLF_02638 1.9e-209 xylR GK ROK family
PMCDCCLF_02639 2.1e-79
PMCDCCLF_02640 4.7e-232 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PMCDCCLF_02641 3.9e-162
PMCDCCLF_02642 3.2e-200 KLT Protein tyrosine kinase
PMCDCCLF_02643 2.9e-23 S Protein of unknown function (DUF4064)
PMCDCCLF_02644 6e-97 S Domain of unknown function (DUF4352)
PMCDCCLF_02645 3.9e-75 S Psort location Cytoplasmic, score
PMCDCCLF_02646 4.8e-55
PMCDCCLF_02647 3.6e-110 S membrane transporter protein
PMCDCCLF_02648 2.3e-54 azlD S branched-chain amino acid
PMCDCCLF_02649 5.1e-131 azlC E branched-chain amino acid
PMCDCCLF_02650 1.3e-90 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
PMCDCCLF_02651 1.9e-237 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PMCDCCLF_02652 1.3e-213 hpk31 2.7.13.3 T Histidine kinase
PMCDCCLF_02653 3.2e-124 K response regulator
PMCDCCLF_02654 5.5e-124 yoaK S Protein of unknown function (DUF1275)
PMCDCCLF_02655 2.8e-149 prsA 3.1.3.16, 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PMCDCCLF_02656 2.3e-212 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PMCDCCLF_02657 5.2e-125 XK27_01040 S Protein of unknown function (DUF1129)
PMCDCCLF_02658 2e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PMCDCCLF_02659 9.8e-31 yyzM S Bacterial protein of unknown function (DUF951)
PMCDCCLF_02660 4.8e-157 spo0J K Belongs to the ParB family
PMCDCCLF_02661 6.9e-136 soj D Sporulation initiation inhibitor
PMCDCCLF_02662 2.7e-149 noc K Belongs to the ParB family
PMCDCCLF_02663 1.7e-128 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PMCDCCLF_02664 4.1e-226 nupG F Nucleoside
PMCDCCLF_02665 2e-270 S Bacterial membrane protein YfhO
PMCDCCLF_02666 1.7e-212 S Bacterial membrane protein YfhO
PMCDCCLF_02667 4e-38 S Alpha/beta hydrolase of unknown function (DUF915)
PMCDCCLF_02668 2.7e-97 S Alpha/beta hydrolase of unknown function (DUF915)
PMCDCCLF_02669 2.1e-168 K LysR substrate binding domain
PMCDCCLF_02670 1.9e-236 EK Aminotransferase, class I
PMCDCCLF_02671 2.3e-126 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PMCDCCLF_02672 8.1e-123 tcyB E ABC transporter
PMCDCCLF_02673 3.6e-137 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PMCDCCLF_02674 1.3e-129 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PMCDCCLF_02675 3.8e-78 KT response to antibiotic
PMCDCCLF_02676 1.5e-52 K Transcriptional regulator
PMCDCCLF_02677 7.7e-72 XK27_06920 S Protein of unknown function (DUF1700)
PMCDCCLF_02678 1.7e-128 S Putative adhesin
PMCDCCLF_02679 0.0 scrA 2.7.1.193, 2.7.1.211 G phosphotransferase system
PMCDCCLF_02680 0.0 malA 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
PMCDCCLF_02681 3.7e-182 5.1.1.1 K Periplasmic binding proteins and sugar binding domain of LacI family
PMCDCCLF_02682 2.2e-204 S DUF218 domain
PMCDCCLF_02683 2e-127 ybbM S Uncharacterised protein family (UPF0014)
PMCDCCLF_02684 9.4e-118 ybbL S ABC transporter, ATP-binding protein
PMCDCCLF_02685 2.7e-274 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PMCDCCLF_02686 9.4e-77
PMCDCCLF_02687 3.4e-152 qorB 1.6.5.2 GM NmrA-like family
PMCDCCLF_02688 1.4e-147 cof S haloacid dehalogenase-like hydrolase
PMCDCCLF_02689 1.1e-92 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PMCDCCLF_02690 1.5e-307 mngB 3.2.1.170, 3.2.1.24 GH38 G Glycosyl hydrolases family 38 N-terminal domain
PMCDCCLF_02691 2.8e-122 mngA 2.7.1.195, 2.7.1.202 U Phosphotransferase system, EIIC
PMCDCCLF_02692 2.4e-26 mngA 2.7.1.195, 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
PMCDCCLF_02693 2.9e-20 fryA 2.7.1.202 G COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type)
PMCDCCLF_02694 2.2e-90 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PMCDCCLF_02695 2e-77 merR K MerR family regulatory protein
PMCDCCLF_02696 1.4e-156 1.6.5.2 GM NmrA-like family
PMCDCCLF_02697 0.0 treB 2.7.1.193, 2.7.1.211 G phosphotransferase system
PMCDCCLF_02698 3.9e-127 magIII L Base excision DNA repair protein, HhH-GPD family
PMCDCCLF_02699 1.4e-08
PMCDCCLF_02700 2e-100 S NADPH-dependent FMN reductase
PMCDCCLF_02701 7.9e-238 S module of peptide synthetase
PMCDCCLF_02702 4.2e-104
PMCDCCLF_02703 9.8e-88 perR P Belongs to the Fur family
PMCDCCLF_02704 7.1e-59 S Enterocin A Immunity
PMCDCCLF_02705 5.4e-36 S Phospholipase_D-nuclease N-terminal
PMCDCCLF_02706 1.8e-169 cpdA 2.1.2.2, 3.1.4.17, 3.1.4.53 S Calcineurin-like phosphoesterase
PMCDCCLF_02707 3.8e-104 J Acetyltransferase (GNAT) domain
PMCDCCLF_02708 5.1e-64 lrgA S LrgA family
PMCDCCLF_02709 7.3e-127 lrgB M LrgB-like family
PMCDCCLF_02710 2.5e-145 DegV S EDD domain protein, DegV family
PMCDCCLF_02711 4.1e-25
PMCDCCLF_02712 3.5e-118 yugP S Putative neutral zinc metallopeptidase
PMCDCCLF_02713 1.1e-294 crtI 1.3.99.26, 1.3.99.28, 1.3.99.29, 1.3.99.31 Q Flavin containing amine oxidoreductase
PMCDCCLF_02714 7.4e-166 crtB 2.5.1.21, 2.5.1.32, 2.5.1.99 I Squalene/phytoene synthase
PMCDCCLF_02715 1.7e-184 D Alpha beta
PMCDCCLF_02716 7.1e-198 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PMCDCCLF_02717 8.1e-257 gor 1.8.1.7 C Glutathione reductase
PMCDCCLF_02718 3.4e-55 S Enterocin A Immunity
PMCDCCLF_02719 7.4e-247 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PMCDCCLF_02720 1.4e-253 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PMCDCCLF_02721 3.5e-185 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PMCDCCLF_02722 1.7e-145 ptp2 3.1.3.48 T Tyrosine phosphatase family
PMCDCCLF_02723 4.8e-279 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PMCDCCLF_02725 6.2e-82
PMCDCCLF_02726 1.5e-256 yhdG E C-terminus of AA_permease
PMCDCCLF_02728 0.0 kup P Transport of potassium into the cell
PMCDCCLF_02729 4.6e-166 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PMCDCCLF_02730 3.1e-179 K AI-2E family transporter
PMCDCCLF_02731 4e-217 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
PMCDCCLF_02732 4.4e-59 qacC P Small Multidrug Resistance protein
PMCDCCLF_02733 1.1e-44 qacH U Small Multidrug Resistance protein
PMCDCCLF_02734 3e-116 hly S protein, hemolysin III
PMCDCCLF_02735 5.1e-54 nmtR K helix_turn_helix, Arsenical Resistance Operon Repressor
PMCDCCLF_02736 2.7e-160 czcD P cation diffusion facilitator family transporter
PMCDCCLF_02737 2.7e-103 K Helix-turn-helix XRE-family like proteins
PMCDCCLF_02739 2.1e-21
PMCDCCLF_02741 6.5e-96 tag 3.2.2.20 L glycosylase
PMCDCCLF_02742 1.2e-213 folP 2.5.1.15 H dihydropteroate synthase
PMCDCCLF_02743 1.7e-105 xtp 2.5.1.15, 3.6.1.66 F Ham1 family
PMCDCCLF_02744 4.8e-249 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PMCDCCLF_02745 2.6e-103 folE 2.7.6.3, 3.5.4.16 F GTP cyclohydrolase 1
PMCDCCLF_02746 8.3e-93 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
PMCDCCLF_02747 2.2e-63 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PMCDCCLF_02748 4.7e-83 cvpA S Colicin V production protein
PMCDCCLF_02749 2e-169 znuA P Belongs to the bacterial solute-binding protein 9 family
PMCDCCLF_02750 8.6e-249 EGP Major facilitator Superfamily
PMCDCCLF_02752 7e-40
PMCDCCLF_02753 1.5e-42 S COG NOG38524 non supervised orthologous group
PMCDCCLF_02754 2.3e-95 V VanZ like family
PMCDCCLF_02755 5e-195 blaA6 V Beta-lactamase
PMCDCCLF_02756 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
PMCDCCLF_02757 6.7e-161 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PMCDCCLF_02758 5.1e-53 yitW S Pfam:DUF59
PMCDCCLF_02759 7.7e-174 S Aldo keto reductase
PMCDCCLF_02760 2.9e-30 FG HIT domain
PMCDCCLF_02761 1.5e-55 FG HIT domain
PMCDCCLF_02762 8.1e-38 S Bacteriocin-protection, YdeI or OmpD-Associated
PMCDCCLF_02763 1.4e-77
PMCDCCLF_02764 1.4e-121 E GDSL-like Lipase/Acylhydrolase family
PMCDCCLF_02765 1.1e-306 U Belongs to the BCCT transporter (TC 2.A.15) family
PMCDCCLF_02766 0.0 cadA P P-type ATPase
PMCDCCLF_02768 5.1e-122 yyaQ S YjbR
PMCDCCLF_02769 4.8e-221 S Uncharacterized protein conserved in bacteria (DUF2325)
PMCDCCLF_02770 0.0 ade 3.5.4.2 F Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PMCDCCLF_02771 1.3e-199 frlB M SIS domain
PMCDCCLF_02772 0.0 L Transposase
PMCDCCLF_02773 6.1e-27 3.2.2.10 S Belongs to the LOG family
PMCDCCLF_02774 4.7e-255 nhaC C Na H antiporter NhaC
PMCDCCLF_02775 1.5e-250 cycA E Amino acid permease
PMCDCCLF_02776 1.8e-167 S Alpha/beta hydrolase of unknown function (DUF915)
PMCDCCLF_02777 7.3e-86 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
PMCDCCLF_02778 9.7e-163 azoB GM NmrA-like family
PMCDCCLF_02779 5.4e-66 K Winged helix DNA-binding domain
PMCDCCLF_02780 7e-71 spx4 1.20.4.1 P ArsC family
PMCDCCLF_02781 6.3e-66 yeaO S Protein of unknown function, DUF488
PMCDCCLF_02782 4e-53
PMCDCCLF_02783 4.1e-214 mutY L A G-specific adenine glycosylase
PMCDCCLF_02784 1.9e-62
PMCDCCLF_02785 4.3e-86
PMCDCCLF_02786 1.2e-79 hsp3 O Belongs to the small heat shock protein (HSP20) family
PMCDCCLF_02787 7e-56
PMCDCCLF_02788 2.1e-14
PMCDCCLF_02789 1.1e-115 GM NmrA-like family
PMCDCCLF_02790 1.4e-80 elaA S GNAT family
PMCDCCLF_02791 1.6e-158 EG EamA-like transporter family
PMCDCCLF_02792 1.8e-119 S membrane
PMCDCCLF_02793 6.8e-111 S VIT family
PMCDCCLF_02794 1.3e-190 pva2 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
PMCDCCLF_02795 0.0 copB 3.6.3.4 P P-type ATPase
PMCDCCLF_02796 9.4e-74 copR K Copper transport repressor CopY TcrY
PMCDCCLF_02797 7.4e-40
PMCDCCLF_02798 7e-74 S COG NOG18757 non supervised orthologous group
PMCDCCLF_02799 3.3e-248 lmrB EGP Major facilitator Superfamily
PMCDCCLF_02800 3.4e-25
PMCDCCLF_02801 1.1e-49
PMCDCCLF_02802 9.4e-65 ycgX S Protein of unknown function (DUF1398)
PMCDCCLF_02803 4e-251 U Belongs to the purine-cytosine permease (2.A.39) family
PMCDCCLF_02804 8.2e-54
PMCDCCLF_02805 4.4e-68
PMCDCCLF_02806 2.7e-61
PMCDCCLF_02807 1.2e-261 S Virulence-associated protein E
PMCDCCLF_02808 1.9e-136 L Primase C terminal 1 (PriCT-1)
PMCDCCLF_02809 5.1e-31
PMCDCCLF_02810 6.3e-22
PMCDCCLF_02813 4.3e-41
PMCDCCLF_02814 9e-119 S Phage regulatory protein Rha (Phage_pRha)
PMCDCCLF_02817 1.2e-88 S KilA-N domain
PMCDCCLF_02818 8.3e-218 sip L Belongs to the 'phage' integrase family
PMCDCCLF_02819 5.9e-214 mdtG EGP Major facilitator Superfamily
PMCDCCLF_02820 8.6e-176 D Alpha beta
PMCDCCLF_02821 5.8e-77 M1-874 K Domain of unknown function (DUF1836)
PMCDCCLF_02822 5.9e-85 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
PMCDCCLF_02823 0.0 pacL3 3.6.3.8 P Cation transporter/ATPase, N-terminus
PMCDCCLF_02824 2.1e-311 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PMCDCCLF_02825 3.8e-152 ywkB S Membrane transport protein
PMCDCCLF_02826 3.3e-163 yvgN C Aldo keto reductase
PMCDCCLF_02827 9.2e-133 thrE S Putative threonine/serine exporter
PMCDCCLF_02828 2e-77 S Threonine/Serine exporter, ThrE
PMCDCCLF_02829 5.2e-43 S Protein of unknown function (DUF1093)
PMCDCCLF_02830 1.5e-147 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PMCDCCLF_02831 3e-90 ymdB S Macro domain protein
PMCDCCLF_02832 9.9e-95 K transcriptional regulator
PMCDCCLF_02833 5.5e-50 yvlA
PMCDCCLF_02834 7.9e-161 ypuA S Protein of unknown function (DUF1002)
PMCDCCLF_02835 0.0
PMCDCCLF_02836 5.8e-186 S Bacterial protein of unknown function (DUF916)
PMCDCCLF_02837 1.7e-129 S WxL domain surface cell wall-binding
PMCDCCLF_02838 6.7e-136 T Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
PMCDCCLF_02839 3.5e-88 K Winged helix DNA-binding domain
PMCDCCLF_02840 2.4e-116 luxT K Bacterial regulatory proteins, tetR family
PMCDCCLF_02841 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
PMCDCCLF_02842 1.8e-27
PMCDCCLF_02843 1.6e-284 gadB 4.1.1.15 E Belongs to the group II decarboxylase family
PMCDCCLF_02844 1.5e-75 mltD CBM50 M PFAM NLP P60 protein
PMCDCCLF_02845 1.1e-53
PMCDCCLF_02846 2.1e-61
PMCDCCLF_02848 8.1e-108
PMCDCCLF_02849 2.5e-52 S Uncharacterized protein conserved in bacteria (DUF2316)
PMCDCCLF_02850 2.6e-159 4.1.1.46 S Amidohydrolase
PMCDCCLF_02851 6.7e-99 K transcriptional regulator
PMCDCCLF_02852 7.2e-183 yfeX P Peroxidase
PMCDCCLF_02853 1.7e-136 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PMCDCCLF_02854 2.4e-127 ydcF S Gram-negative-bacterium-type cell wall biogenesis
PMCDCCLF_02855 6.9e-181 celE 3.2.1.4 GH5,GH9 E GDSL-like Lipase/Acylhydrolase family
PMCDCCLF_02856 0.0 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
PMCDCCLF_02857 9.8e-143 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PMCDCCLF_02858 1.5e-55 txlA O Thioredoxin-like domain
PMCDCCLF_02859 4.3e-40 yrkD S Metal-sensitive transcriptional repressor
PMCDCCLF_02860 1.6e-18
PMCDCCLF_02861 2.8e-94 dps P Belongs to the Dps family
PMCDCCLF_02862 1.6e-32 copZ P Heavy-metal-associated domain
PMCDCCLF_02863 4.3e-118 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
PMCDCCLF_02864 0.0 pepO 3.4.24.71 O Peptidase family M13
PMCDCCLF_02865 1.9e-83 yoaA 2.3.1.128 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PMCDCCLF_02866 1.3e-262 nox C NADH oxidase
PMCDCCLF_02867 0.0 XK27_00720 S Leucine-rich repeat (LRR) protein
PMCDCCLF_02868 6.1e-164 S Cell surface protein
PMCDCCLF_02869 1.5e-118 S WxL domain surface cell wall-binding
PMCDCCLF_02870 2.3e-99 S WxL domain surface cell wall-binding
PMCDCCLF_02871 4.6e-45
PMCDCCLF_02872 2.7e-103 K Bacterial regulatory proteins, tetR family
PMCDCCLF_02873 1.5e-49
PMCDCCLF_02874 3.6e-249 S Putative metallopeptidase domain
PMCDCCLF_02875 5.4e-220 3.1.3.1 S associated with various cellular activities
PMCDCCLF_02876 1.6e-174 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PMCDCCLF_02877 1.8e-108 aqpZ U Belongs to the MIP aquaporin (TC 1.A.8) family
PMCDCCLF_02878 0.0 ubiB S ABC1 family
PMCDCCLF_02879 4.5e-250 brnQ U Component of the transport system for branched-chain amino acids
PMCDCCLF_02880 0.0 lacS G Transporter
PMCDCCLF_02881 0.0 lacA 3.2.1.23 G -beta-galactosidase
PMCDCCLF_02882 1.6e-188 lacR K Transcriptional regulator
PMCDCCLF_02883 0.0 3.2.1.40 G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PMCDCCLF_02884 3.6e-230 mdtH P Sugar (and other) transporter
PMCDCCLF_02885 2.3e-303 ram2 3.2.1.40 G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PMCDCCLF_02886 8.6e-232 EGP Major facilitator Superfamily
PMCDCCLF_02887 7.4e-183 rhaR K helix_turn_helix, arabinose operon control protein
PMCDCCLF_02888 5e-100 fic D Fic/DOC family
PMCDCCLF_02889 8e-76 K Helix-turn-helix XRE-family like proteins
PMCDCCLF_02890 2e-183 galR K Transcriptional regulator
PMCDCCLF_02891 1.3e-284 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PMCDCCLF_02892 8.9e-192 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PMCDCCLF_02893 9.3e-225 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PMCDCCLF_02894 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PMCDCCLF_02895 7e-186 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
PMCDCCLF_02896 0.0 rafA 3.2.1.22 G alpha-galactosidase
PMCDCCLF_02897 0.0 lacS G Transporter
PMCDCCLF_02898 4.1e-200 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PMCDCCLF_02899 1.1e-173 galR K Transcriptional regulator
PMCDCCLF_02900 2.6e-194 C Aldo keto reductase family protein
PMCDCCLF_02901 3.1e-65 S pyridoxamine 5-phosphate
PMCDCCLF_02902 0.0 1.3.5.4 C FAD binding domain
PMCDCCLF_02903 4.8e-179 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PMCDCCLF_02904 2.4e-133 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PMCDCCLF_02905 2.5e-166 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PMCDCCLF_02906 9.2e-175 K Transcriptional regulator, LysR family
PMCDCCLF_02907 1.2e-219 ydiN EGP Major Facilitator Superfamily
PMCDCCLF_02908 5e-162 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PMCDCCLF_02909 9.4e-161 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PMCDCCLF_02910 1e-156 IQ Enoyl-(Acyl carrier protein) reductase
PMCDCCLF_02911 2.3e-164 G Xylose isomerase-like TIM barrel
PMCDCCLF_02912 4.7e-168 K Transcriptional regulator, LysR family
PMCDCCLF_02913 1.2e-201 EGP Major Facilitator Superfamily
PMCDCCLF_02914 7.6e-64
PMCDCCLF_02915 1.8e-155 estA S Putative esterase
PMCDCCLF_02916 1.2e-134 K UTRA domain
PMCDCCLF_02917 3.6e-249 pts29C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMCDCCLF_02918 8.8e-165 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PMCDCCLF_02919 6.9e-159 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
PMCDCCLF_02920 1.1e-211 S Bacterial protein of unknown function (DUF871)
PMCDCCLF_02921 5.5e-291 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PMCDCCLF_02922 0.0 pts30BCA 2.7.1.193, 2.7.1.211 G phosphotransferase system
PMCDCCLF_02923 1.3e-154 licT K CAT RNA binding domain
PMCDCCLF_02924 0.0 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PMCDCCLF_02925 3.2e-225 malY 4.4.1.8 E Aminotransferase class I and II
PMCDCCLF_02926 2.5e-267 frvB 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
PMCDCCLF_02927 3.3e-74 ptsN 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PMCDCCLF_02928 3.7e-79 ptsG 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PMCDCCLF_02929 1.3e-137 yleF K Helix-turn-helix domain, rpiR family
PMCDCCLF_02930 7.2e-246 sacX 2.7.1.193, 2.7.1.211 G phosphotransferase system
PMCDCCLF_02931 5.4e-156 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PMCDCCLF_02932 2.4e-141 4.2.1.126 S Bacterial protein of unknown function (DUF871)
PMCDCCLF_02933 1.2e-35 4.2.1.126 S Bacterial protein of unknown function (DUF871)
PMCDCCLF_02934 3.1e-294 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PMCDCCLF_02935 1.9e-291 pbg10 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PMCDCCLF_02936 0.0 bglP 2.7.1.193, 2.7.1.211 G phosphotransferase system
PMCDCCLF_02937 3.8e-159 licT K CAT RNA binding domain
PMCDCCLF_02938 0.0 treP 2.4.1.64 GH65 G hydrolase, family 65, central catalytic
PMCDCCLF_02939 1.1e-173 K Transcriptional regulator, LacI family
PMCDCCLF_02940 6.1e-271 G Major Facilitator
PMCDCCLF_02941 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PMCDCCLF_02943 1.3e-174 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PMCDCCLF_02944 3e-145 yxeH S hydrolase
PMCDCCLF_02945 0.0 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PMCDCCLF_02946 7e-113 tal 2.2.1.2 F Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PMCDCCLF_02947 3.2e-240 ulaA 2.7.1.194 S PTS system sugar-specific permease component
PMCDCCLF_02948 2.2e-45 ulaB 2.7.1.194, 2.7.1.200 G Phosphotransferase system galactitol-specific IIB component
PMCDCCLF_02949 2e-77 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PMCDCCLF_02950 0.0 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PMCDCCLF_02951 1.3e-113 gph 3.1.3.18 S Haloacid dehalogenase-like hydrolase
PMCDCCLF_02952 3e-188 gutB 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
PMCDCCLF_02953 1.1e-231 gatC G PTS system sugar-specific permease component
PMCDCCLF_02954 1.1e-44 2.7.1.194, 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
PMCDCCLF_02955 1.5e-80 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PMCDCCLF_02956 5.2e-123 K DeoR C terminal sensor domain
PMCDCCLF_02957 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PMCDCCLF_02958 2.6e-70 yueI S Protein of unknown function (DUF1694)
PMCDCCLF_02959 9.6e-103 maa 2.3.1.18, 2.3.1.79 S Maltose O-acetyltransferase
PMCDCCLF_02960 6.6e-265 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
PMCDCCLF_02961 1e-136 araD 4.1.2.17, 4.1.2.19, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
PMCDCCLF_02962 1.7e-306 araB 2.7.1.12, 2.7.1.16, 2.7.1.5 G carbohydrate kinase FGGY
PMCDCCLF_02963 1.6e-255 araP U Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PMCDCCLF_02964 3.1e-206 araR K Transcriptional regulator
PMCDCCLF_02965 6.7e-122 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PMCDCCLF_02966 4.2e-228 1.7.1.15 S Pyridine nucleotide-disulphide oxidoreductase
PMCDCCLF_02967 4.2e-70 S Pyrimidine dimer DNA glycosylase
PMCDCCLF_02968 4.5e-89 folT 2.7.13.3 T ECF transporter, substrate-specific component
PMCDCCLF_02969 3.6e-11
PMCDCCLF_02970 9e-13 ytgB S Transglycosylase associated protein
PMCDCCLF_02971 1.9e-291 katA 1.11.1.6 C Belongs to the catalase family
PMCDCCLF_02972 4.9e-78 yneH 1.20.4.1 K ArsC family
PMCDCCLF_02973 2.8e-134 K LytTr DNA-binding domain
PMCDCCLF_02974 8.7e-160 2.7.13.3 T GHKL domain
PMCDCCLF_02975 1.8e-12
PMCDCCLF_02976 2.4e-67 agrB KOT May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor
PMCDCCLF_02977 0.0 clpL O C-terminal, D2-small domain, of ClpB protein
PMCDCCLF_02979 6.1e-202 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PMCDCCLF_02980 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PMCDCCLF_02981 8.7e-72 K Transcriptional regulator
PMCDCCLF_02982 0.0 spxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PMCDCCLF_02983 8.6e-63 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PMCDCCLF_02984 1.3e-174 srlE 2.7.1.198 G Sorbitol phosphotransferase enzyme II N-terminus
PMCDCCLF_02985 2e-100 srlA G PTS system enzyme II sorbitol-specific factor
PMCDCCLF_02986 1.1e-86 gutM K Glucitol operon activator protein (GutM)
PMCDCCLF_02987 0.0 srlM 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Mga helix-turn-helix domain
PMCDCCLF_02988 1.5e-144 IQ NAD dependent epimerase/dehydratase family
PMCDCCLF_02989 2.7e-160 rbsU U ribose uptake protein RbsU
PMCDCCLF_02990 7.9e-67 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PMCDCCLF_02991 8e-163 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PMCDCCLF_02992 5.9e-188 rbsR K helix_turn _helix lactose operon repressor
PMCDCCLF_02993 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PMCDCCLF_02994 2.7e-79 T Universal stress protein family
PMCDCCLF_02995 2.2e-99 padR K Virulence activator alpha C-term
PMCDCCLF_02996 1.7e-104 padC Q Phenolic acid decarboxylase
PMCDCCLF_02997 4.4e-141 tesE Q hydratase
PMCDCCLF_02998 2.2e-87 yjaB_1 K Acetyltransferase (GNAT) domain
PMCDCCLF_02999 8e-157 degV S DegV family
PMCDCCLF_03000 2.4e-58 2.6.1.2, 2.6.1.66 K Bacteriophage CI repressor helix-turn-helix domain
PMCDCCLF_03001 1.5e-255 pepC 3.4.22.40 E aminopeptidase
PMCDCCLF_03003 1.2e-108 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PMCDCCLF_03004 6.6e-303
PMCDCCLF_03006 1.2e-159 S Bacterial protein of unknown function (DUF916)
PMCDCCLF_03007 6.9e-93 S Cell surface protein
PMCDCCLF_03008 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PMCDCCLF_03009 4.6e-255 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PMCDCCLF_03010 2.1e-129 jag S R3H domain protein
PMCDCCLF_03011 6e-238 Q Imidazolonepropionase and related amidohydrolases
PMCDCCLF_03012 2e-310 E ABC transporter, substratebinding protein
PMCDCCLF_03013 1.8e-105 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PMCDCCLF_03014 6.4e-57 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PMCDCCLF_03015 4.5e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PMCDCCLF_03016 1.9e-48 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PMCDCCLF_03017 2.4e-164 corA P CorA-like Mg2+ transporter protein
PMCDCCLF_03018 4.5e-67 tnp2PF3 L Transposase
PMCDCCLF_03019 9.8e-34 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PMCDCCLF_03020 6.5e-35 tnp2PF3 L Transposase DDE domain
PMCDCCLF_03021 3.1e-41
PMCDCCLF_03022 2.5e-27
PMCDCCLF_03023 0.0 L MobA MobL family protein
PMCDCCLF_03024 1.9e-284 traI 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PMCDCCLF_03025 8.6e-40 K LysR substrate binding domain
PMCDCCLF_03026 1.3e-193 1.3.5.4 C FMN_bind
PMCDCCLF_03027 1e-102 tnpR L Resolvase, N terminal domain
PMCDCCLF_03028 5.4e-26 tra L Transposase and inactivated derivatives, IS30 family
PMCDCCLF_03029 2e-160 tra L Transposase and inactivated derivatives, IS30 family
PMCDCCLF_03030 2.6e-09 S Mor transcription activator family
PMCDCCLF_03031 2.5e-138 L Integrase core domain
PMCDCCLF_03032 1.1e-34 L Transposase and inactivated derivatives
PMCDCCLF_03033 1e-68 cps1D M Domain of unknown function (DUF4422)
PMCDCCLF_03034 5.4e-85 2.4.1.166 GT2 M Glycosyltransferase like family 2
PMCDCCLF_03035 1.2e-45 2.4.1.166 GT2 M PFAM Glycosyl transferase family 2
PMCDCCLF_03036 2.4e-24
PMCDCCLF_03037 3.7e-74 S Polysaccharide pyruvyl transferase
PMCDCCLF_03038 8.5e-108 S Polysaccharide biosynthesis protein
PMCDCCLF_03039 6.6e-46 1.13.11.79 C Psort location Cytoplasmic, score 8.87
PMCDCCLF_03040 3e-46 M Glycosyltransferase sugar-binding region containing DXD motif
PMCDCCLF_03041 1.1e-220 L Transposase
PMCDCCLF_03042 2.3e-156 L Integrase core domain
PMCDCCLF_03043 2.2e-41 L Transposase and inactivated derivatives
PMCDCCLF_03044 2.1e-124 epsB M biosynthesis protein
PMCDCCLF_03045 8.6e-128 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PMCDCCLF_03046 5.6e-133 ywqE 3.1.3.48 GM PHP domain protein
PMCDCCLF_03047 2.3e-156 L Integrase core domain
PMCDCCLF_03048 2.2e-41 L Transposase and inactivated derivatives
PMCDCCLF_03049 3.1e-193 glf 5.4.99.9 M UDP-galactopyranose mutase
PMCDCCLF_03050 1.3e-74 rfbP M Bacterial sugar transferase
PMCDCCLF_03052 1.4e-23 L Transposase and inactivated derivatives
PMCDCCLF_03053 1.3e-150 L Integrase core domain
PMCDCCLF_03054 5e-94 L COG1484 DNA replication protein
PMCDCCLF_03056 3.1e-195 L Transposase
PMCDCCLF_03058 2.7e-66 soj D AAA domain
PMCDCCLF_03060 4.5e-67 tnp2PF3 L Transposase
PMCDCCLF_03061 9.8e-34 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PMCDCCLF_03062 1.1e-43 relB L Addiction module antitoxin, RelB DinJ family
PMCDCCLF_03063 8.9e-66
PMCDCCLF_03064 6.7e-60
PMCDCCLF_03065 2.5e-262 traK U TraM recognition site of TraD and TraG
PMCDCCLF_03066 4.6e-82
PMCDCCLF_03067 3.2e-62 CO COG0526, thiol-disulfide isomerase and thioredoxins
PMCDCCLF_03068 8.7e-89
PMCDCCLF_03069 1.9e-206 M CHAP domain
PMCDCCLF_03070 7.8e-234 polC 2.4.1.129, 2.7.7.7, 3.4.16.4 GT51 S WXG100 protein secretion system (Wss), protein YukC
PMCDCCLF_03071 0.0 U AAA-like domain
PMCDCCLF_03072 3.1e-116
PMCDCCLF_03073 3.9e-36
PMCDCCLF_03074 2.7e-52 S Cag pathogenicity island, type IV secretory system
PMCDCCLF_03075 4.1e-99
PMCDCCLF_03076 1.5e-49
PMCDCCLF_03077 0.0 L MobA MobL family protein
PMCDCCLF_03078 3e-25
PMCDCCLF_03079 6.8e-41
PMCDCCLF_03080 2e-53 Q Methyltransferase
PMCDCCLF_03081 1.7e-18 Q Methyltransferase domain
PMCDCCLF_03082 5.3e-129 repA S Replication initiator protein A
PMCDCCLF_03084 7.3e-133 D CobQ CobB MinD ParA nucleotide binding domain protein
PMCDCCLF_03085 2.8e-97 K Bacterial regulatory proteins, tetR family
PMCDCCLF_03086 8.2e-292 norB EGP Major Facilitator
PMCDCCLF_03087 3.6e-97 tnpR1 L Resolvase, N terminal domain
PMCDCCLF_03088 2.7e-70 3.1.21.3 V Type I restriction modification DNA specificity domain
PMCDCCLF_03089 1.5e-242 mesE M Transport protein ComB
PMCDCCLF_03090 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PMCDCCLF_03094 1e-11 K Bacterial regulatory proteins, tetR family
PMCDCCLF_03095 2.6e-75 S Protein of unknown function with HXXEE motif
PMCDCCLF_03097 7.6e-252 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
PMCDCCLF_03098 4.7e-54
PMCDCCLF_03099 2.7e-64
PMCDCCLF_03100 1.2e-100 K Helix-turn-helix domain
PMCDCCLF_03101 8e-174 nsr 3.4.21.102 M Peptidase family S41
PMCDCCLF_03102 9e-193 L Psort location Cytoplasmic, score
PMCDCCLF_03103 1.2e-32
PMCDCCLF_03104 0.0 traI 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PMCDCCLF_03105 1.3e-69
PMCDCCLF_03106 2.5e-29
PMCDCCLF_03107 1.6e-28 L Psort location Cytoplasmic, score
PMCDCCLF_03108 1.5e-145 L COG3547 Transposase and inactivated derivatives
PMCDCCLF_03109 5.8e-203 3.3.1.1 H adenosylhomocysteinase activity
PMCDCCLF_03110 2.4e-116 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PMCDCCLF_03111 3.7e-220 EGP Major facilitator Superfamily
PMCDCCLF_03112 2.3e-20 S FRG
PMCDCCLF_03113 1.1e-220 L Transposase
PMCDCCLF_03114 5.2e-64 KT Transcriptional regulatory protein, C terminal
PMCDCCLF_03115 0.0 kup P Transport of potassium into the cell
PMCDCCLF_03116 4.8e-57 K helix_turn_helix multiple antibiotic resistance protein
PMCDCCLF_03117 8.6e-96 tnpR1 L Resolvase, N terminal domain
PMCDCCLF_03118 5.9e-61 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PMCDCCLF_03119 4.7e-81 nrdI F NrdI Flavodoxin like
PMCDCCLF_03120 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PMCDCCLF_03121 2.1e-171 nrdF 1.17.4.1 F Ribonucleotide reductase, small chain
PMCDCCLF_03122 7.9e-182 1.17.4.1 F Ribonucleotide reductase, small chain
PMCDCCLF_03123 1.2e-114 L hmm pf00665
PMCDCCLF_03124 9.5e-107 L Resolvase, N terminal domain
PMCDCCLF_03125 4.7e-160 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PMCDCCLF_03126 1.8e-68 L Putative transposase of IS4/5 family (DUF4096)
PMCDCCLF_03127 2e-76 L Transposase DDE domain
PMCDCCLF_03128 1.1e-193 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PMCDCCLF_03129 2e-76 L Transposase DDE domain
PMCDCCLF_03130 1.8e-68 L Putative transposase of IS4/5 family (DUF4096)
PMCDCCLF_03131 6.5e-290 clcA P chloride
PMCDCCLF_03132 2.6e-145 L COG3547 Transposase and inactivated derivatives
PMCDCCLF_03133 9e-29 M Lysin motif
PMCDCCLF_03134 7.7e-188 L Helix-turn-helix domain
PMCDCCLF_03135 9.6e-185 gbuA 3.6.1.1, 3.6.3.32 E glycine betaine
PMCDCCLF_03136 5.3e-113 proW E glycine betaine
PMCDCCLF_03137 1.6e-99 gbuC E glycine betaine
PMCDCCLF_03138 6.8e-189 L PFAM Integrase catalytic region
PMCDCCLF_03139 1.4e-175 L Transposase and inactivated derivatives, IS30 family
PMCDCCLF_03140 4.6e-11
PMCDCCLF_03141 3.8e-98 soj D CobQ CobB MinD ParA nucleotide binding domain protein
PMCDCCLF_03143 9.6e-43 relB L Addiction module antitoxin, RelB DinJ family
PMCDCCLF_03144 1.7e-82
PMCDCCLF_03145 3.6e-131 L Helix-turn-helix domain
PMCDCCLF_03146 2e-140 L hmm pf00665
PMCDCCLF_03147 1.6e-174 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PMCDCCLF_03148 1.3e-39
PMCDCCLF_03149 2.5e-27
PMCDCCLF_03150 0.0 L MobA MobL family protein
PMCDCCLF_03151 4.9e-68 traI 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PMCDCCLF_03152 5.3e-41
PMCDCCLF_03153 1.2e-28
PMCDCCLF_03154 6.6e-53 repA S Replication initiator protein A
PMCDCCLF_03155 5.3e-95 yhiD S MgtC family
PMCDCCLF_03156 4.5e-67 tnp2PF3 L Transposase
PMCDCCLF_03157 9.8e-34 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PMCDCCLF_03158 8.4e-18
PMCDCCLF_03159 8.3e-37 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PMCDCCLF_03160 1.6e-143 soj D CobQ CobB MinD ParA nucleotide binding domain protein
PMCDCCLF_03161 1.2e-23 S Family of unknown function (DUF5388)
PMCDCCLF_03162 1.4e-175 L Transposase and inactivated derivatives, IS30 family
PMCDCCLF_03163 1.2e-160 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PMCDCCLF_03164 6.2e-106 L Resolvase, N terminal domain
PMCDCCLF_03165 3.1e-19 K helix_turn_helix multiple antibiotic resistance protein
PMCDCCLF_03166 1.9e-155
PMCDCCLF_03167 6.9e-35 S Cell surface protein
PMCDCCLF_03170 1.4e-144 L Transposase and inactivated derivatives, IS30 family
PMCDCCLF_03171 1.5e-141 U Binding-protein-dependent transport system inner membrane component
PMCDCCLF_03172 1.7e-151 U Binding-protein-dependent transport system inner membrane component
PMCDCCLF_03173 8.7e-248 G Bacterial extracellular solute-binding protein
PMCDCCLF_03174 6.7e-212 P Belongs to the ABC transporter superfamily
PMCDCCLF_03175 8.1e-98 soj D CobQ CobB MinD ParA nucleotide binding domain protein
PMCDCCLF_03178 2.9e-25
PMCDCCLF_03179 4.3e-95 tnpR1 L Resolvase, N terminal domain
PMCDCCLF_03180 4.3e-58 K helix_turn_helix multiple antibiotic resistance protein
PMCDCCLF_03181 0.0 kup P Transport of potassium into the cell
PMCDCCLF_03182 3.2e-22 KT Transcriptional regulatory protein, C terminal
PMCDCCLF_03183 1.6e-174 L Transposase and inactivated derivatives, IS30 family
PMCDCCLF_03184 1.1e-175 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PMCDCCLF_03185 7e-155 tesE Q hydratase
PMCDCCLF_03186 2e-239 yhjE EGP MFS transporter, metabolite H symporter (MHS) family protein
PMCDCCLF_03187 8.6e-47 ycnE 3.1.1.29 S Antibiotic biosynthesis monooxygenase
PMCDCCLF_03188 5.5e-183 nrdF 1.17.4.1 F Ribonucleotide reductase, small chain
PMCDCCLF_03189 1.7e-168 nrdF 1.17.4.1 F Ribonucleotide reductase, small chain
PMCDCCLF_03190 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PMCDCCLF_03191 4.7e-81 nrdI F NrdI Flavodoxin like
PMCDCCLF_03192 1.4e-34 L AAA ATPase domain
PMCDCCLF_03193 6.6e-24 3.6.4.12 L DNA helicase
PMCDCCLF_03194 1.6e-174 L Transposase and inactivated derivatives, IS30 family
PMCDCCLF_03195 3.3e-278 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
PMCDCCLF_03196 1.9e-155 L COG2801 Transposase and inactivated derivatives
PMCDCCLF_03197 1.4e-59 3.1.21.3 V type I restriction modification DNA specificity domain
PMCDCCLF_03198 5.1e-196 L Psort location Cytoplasmic, score
PMCDCCLF_03199 2e-32
PMCDCCLF_03200 0.0 traI 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PMCDCCLF_03201 0.0 L MobA MobL family protein

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)