ORF_ID e_value Gene_name EC_number CAZy COGs Description
DNDPMHBD_00002 9.4e-97 3.6.4.12 L DnaB-like helicase C terminal domain
DNDPMHBD_00005 2e-122 recD 3.1.11.5 L Helix-hairpin-helix containing domain
DNDPMHBD_00008 1.1e-78 O COG0330 Membrane protease subunits, stomatin prohibitin homologs
DNDPMHBD_00010 9.4e-53 pnuC H Nicotinamide mononucleotide transporter
DNDPMHBD_00017 6.4e-43
DNDPMHBD_00018 1.8e-85 dck 2.7.1.74 F Deoxynucleoside kinase
DNDPMHBD_00033 1.6e-71 2.7.1.74, 2.7.1.76 F Nucleoside
DNDPMHBD_00046 4e-83 L Integrase
DNDPMHBD_00047 5e-31 lytE M LysM domain protein
DNDPMHBD_00048 3.1e-57 tdk 2.7.1.21 F Thymidine kinase
DNDPMHBD_00051 9.1e-34 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
DNDPMHBD_00052 2.2e-31
DNDPMHBD_00055 2.7e-107 S nicotinate-nucleotide diphosphorylase (carboxylating) activity
DNDPMHBD_00056 1.9e-54 2.7.6.1 EF Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DNDPMHBD_00059 6e-07
DNDPMHBD_00064 3.8e-64 2.1.1.37 L C-5 cytosine-specific DNA methylase
DNDPMHBD_00065 2e-62 H Methyltransferase
DNDPMHBD_00068 2.5e-30 S Protein of unknown function (DUF1064)
DNDPMHBD_00069 8.7e-65 S DNA ligase (ATP) activity
DNDPMHBD_00071 2.2e-234 dnaE_2 2.7.7.7 L DNA polymerase
DNDPMHBD_00072 5.4e-18
DNDPMHBD_00073 1.6e-41 S PD-(D/E)XK nuclease superfamily
DNDPMHBD_00074 1.7e-36 S DNA primase activity
DNDPMHBD_00076 7e-63 3.2.1.26, 3.2.1.65 GH32 M Glycosyl hydrolases family 32
DNDPMHBD_00077 9.1e-30 S sequence-specific DNA binding transcription factor activity
DNDPMHBD_00078 6.5e-94 S peptidoglycan catabolic process
DNDPMHBD_00079 5.6e-73 V Restriction endonuclease
DNDPMHBD_00080 2.9e-13
DNDPMHBD_00083 2.8e-09
DNDPMHBD_00084 1.2e-105 fliC N bacterial-type flagellum-dependent cell motility
DNDPMHBD_00085 1.1e-67
DNDPMHBD_00086 4.5e-52
DNDPMHBD_00088 1.5e-51 D Phage-related minor tail protein
DNDPMHBD_00089 4.7e-79 xerH L Belongs to the 'phage' integrase family
DNDPMHBD_00092 1.4e-11 hol S COG5546 Small integral membrane protein
DNDPMHBD_00094 2.9e-07
DNDPMHBD_00096 1e-16
DNDPMHBD_00097 3.2e-33 GT2,GT4 O gp58-like protein
DNDPMHBD_00098 9e-28
DNDPMHBD_00104 2.2e-62
DNDPMHBD_00106 4.3e-50
DNDPMHBD_00107 3.7e-35
DNDPMHBD_00108 6.2e-138 gp17a S Terminase-like family
DNDPMHBD_00109 2.1e-22 1.1.98.6, 3.6.3.14, 3.6.3.15, 4.1.1.35 L Participates in initiation and elongation during chromosome replication
DNDPMHBD_00110 3.3e-22 gp17a S Terminase-like family
DNDPMHBD_00111 8.6e-17
DNDPMHBD_00116 1e-12 S Replication initiator protein A (RepA) N-terminus
DNDPMHBD_00117 1.1e-70 D CobQ CobB MinD ParA nucleotide binding domain protein
DNDPMHBD_00119 2e-41
DNDPMHBD_00133 5.8e-08 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
DNDPMHBD_00137 8.5e-11
DNDPMHBD_00138 4.5e-41 doc S Fic/DOC family
DNDPMHBD_00142 2.3e-22 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
DNDPMHBD_00143 1.9e-25
DNDPMHBD_00145 4.9e-84 L Belongs to the 'phage' integrase family
DNDPMHBD_00147 1.2e-10 2.7.1.24 H dephospho-CoA kinase activity
DNDPMHBD_00149 6.3e-16
DNDPMHBD_00150 4.3e-21 L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DNDPMHBD_00151 2.1e-61
DNDPMHBD_00152 5.7e-32
DNDPMHBD_00153 1.3e-66 ywiB S Domain of unknown function (DUF1934)
DNDPMHBD_00154 8.8e-48 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
DNDPMHBD_00155 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
DNDPMHBD_00156 8e-238 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DNDPMHBD_00157 4.6e-41 rpmE2 J Ribosomal protein L31
DNDPMHBD_00158 6.1e-241 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DNDPMHBD_00159 2.7e-168 S Alpha/beta hydrolase of unknown function (DUF915)
DNDPMHBD_00160 1.1e-124 srtA 3.4.22.70 M sortase family
DNDPMHBD_00161 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
DNDPMHBD_00162 3.6e-159 3.2.1.55 GH51 G Right handed beta helix region
DNDPMHBD_00163 1.2e-138 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
DNDPMHBD_00164 1.7e-162 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
DNDPMHBD_00165 6e-120 pgm3 G Belongs to the phosphoglycerate mutase family
DNDPMHBD_00166 4.4e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DNDPMHBD_00167 7e-93 lemA S LemA family
DNDPMHBD_00168 2e-158 htpX O Belongs to the peptidase M48B family
DNDPMHBD_00169 1.5e-258 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
DNDPMHBD_00170 1.4e-249 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
DNDPMHBD_00171 0.0 sprD D Domain of Unknown Function (DUF1542)
DNDPMHBD_00172 7.7e-166 glsA 3.5.1.2 E Belongs to the glutaminase family
DNDPMHBD_00173 7.3e-255 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DNDPMHBD_00174 2.8e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
DNDPMHBD_00175 1.3e-232 dltB M MBOAT, membrane-bound O-acyltransferase family
DNDPMHBD_00176 3.8e-295 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
DNDPMHBD_00178 6.5e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
DNDPMHBD_00179 3.7e-210 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DNDPMHBD_00180 3.2e-62 L Toxic component of a toxin-antitoxin (TA) module
DNDPMHBD_00181 1.2e-250 U Belongs to the purine-cytosine permease (2.A.39) family
DNDPMHBD_00182 6.1e-243 codA 3.5.4.1 F cytosine deaminase
DNDPMHBD_00183 3.1e-147 tesE Q hydratase
DNDPMHBD_00184 1.8e-113 S (CBS) domain
DNDPMHBD_00185 3.3e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
DNDPMHBD_00186 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DNDPMHBD_00187 2.1e-39 yabO J S4 domain protein
DNDPMHBD_00188 5.6e-56 divIC D Septum formation initiator
DNDPMHBD_00189 9.8e-67 yabR J RNA binding
DNDPMHBD_00190 8.5e-257 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
DNDPMHBD_00191 1.5e-97 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
DNDPMHBD_00192 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DNDPMHBD_00193 3e-170 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
DNDPMHBD_00194 2.2e-190 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DNDPMHBD_00195 3.3e-291 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
DNDPMHBD_00196 3.6e-279 O Arylsulfotransferase (ASST)
DNDPMHBD_00197 9.5e-234 U TraM recognition site of TraD and TraG
DNDPMHBD_00198 2.2e-67
DNDPMHBD_00200 8.4e-29
DNDPMHBD_00201 6.3e-194 U type IV secretory pathway VirB4
DNDPMHBD_00203 2.8e-51 trwN GH23 M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
DNDPMHBD_00206 2.9e-08 V CAAX protease self-immunity
DNDPMHBD_00207 1.9e-29
DNDPMHBD_00210 4.4e-51 E Filamentation induced by cAMP protein fic
DNDPMHBD_00211 1e-78 S Fic/DOC family
DNDPMHBD_00213 2.5e-126 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DNDPMHBD_00214 1.2e-211 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
DNDPMHBD_00215 5.5e-115 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DNDPMHBD_00216 1.3e-35 ynzC S UPF0291 protein
DNDPMHBD_00217 9.8e-30 yneF S Uncharacterised protein family (UPF0154)
DNDPMHBD_00218 1.6e-117 plsC 2.3.1.51 I Acyltransferase
DNDPMHBD_00219 1.9e-141 yabB 2.1.1.223 L Methyltransferase small domain
DNDPMHBD_00220 1.6e-48 yazA L GIY-YIG catalytic domain protein
DNDPMHBD_00221 3.7e-182 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DNDPMHBD_00222 1.2e-143 rpsB J Belongs to the universal ribosomal protein uS2 family
DNDPMHBD_00223 2.4e-153 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
DNDPMHBD_00224 2e-129 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
DNDPMHBD_00225 3.1e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
DNDPMHBD_00226 2.1e-140 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DNDPMHBD_00227 7.6e-138 cdsA 2.7.7.41 I Belongs to the CDS family
DNDPMHBD_00228 3.7e-235 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
DNDPMHBD_00229 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
DNDPMHBD_00230 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DNDPMHBD_00231 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
DNDPMHBD_00232 2.8e-216 nusA K Participates in both transcription termination and antitermination
DNDPMHBD_00233 1e-44 ylxR K Protein of unknown function (DUF448)
DNDPMHBD_00234 1.7e-48 ylxQ J ribosomal protein
DNDPMHBD_00235 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
DNDPMHBD_00236 2.1e-58 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DNDPMHBD_00237 4.4e-166 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DNDPMHBD_00238 4.1e-178 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
DNDPMHBD_00239 2e-64
DNDPMHBD_00240 4.1e-195 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
DNDPMHBD_00241 2.7e-76 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
DNDPMHBD_00242 0.0 dnaK O Heat shock 70 kDa protein
DNDPMHBD_00243 1.9e-198 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
DNDPMHBD_00244 3.2e-72 S Metallo-beta-lactamase superfamily
DNDPMHBD_00245 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
DNDPMHBD_00246 7e-275 pipD E Dipeptidase
DNDPMHBD_00247 1.4e-198 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
DNDPMHBD_00248 2.3e-173 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
DNDPMHBD_00250 2.6e-42
DNDPMHBD_00251 5.4e-178 prmA J Ribosomal protein L11 methyltransferase
DNDPMHBD_00252 2.1e-129 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
DNDPMHBD_00253 1.2e-52
DNDPMHBD_00254 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DNDPMHBD_00255 2.1e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
DNDPMHBD_00256 1.9e-129 L transposase, IS605 OrfB family
DNDPMHBD_00257 0.0 I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DNDPMHBD_00258 7.8e-42 ybaN S Protein of unknown function (DUF454)
DNDPMHBD_00259 5.5e-69 S Protein of unknown function (DUF3290)
DNDPMHBD_00260 2.8e-114 yviA S Protein of unknown function (DUF421)
DNDPMHBD_00261 2.7e-165 S Alpha/beta hydrolase of unknown function (DUF915)
DNDPMHBD_00262 2e-18
DNDPMHBD_00263 2.1e-90 ntd 2.4.2.6 F Nucleoside
DNDPMHBD_00264 4.3e-152 3.1.3.102, 3.1.3.104 S hydrolase
DNDPMHBD_00265 9.8e-40 yrvD S Pfam:DUF1049
DNDPMHBD_00267 2.5e-35 S Phage derived protein Gp49-like (DUF891)
DNDPMHBD_00268 8.5e-20 K Helix-turn-helix XRE-family like proteins
DNDPMHBD_00269 9.7e-163 I alpha/beta hydrolase fold
DNDPMHBD_00270 1.4e-113 frnE Q DSBA-like thioredoxin domain
DNDPMHBD_00271 1.1e-54
DNDPMHBD_00280 4.6e-132 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
DNDPMHBD_00281 4e-139 accA 2.1.3.15, 6.4.1.2 I alpha subunit
DNDPMHBD_00282 3.5e-141 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
DNDPMHBD_00283 1.3e-257 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
DNDPMHBD_00284 3.9e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
DNDPMHBD_00285 1.2e-74 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
DNDPMHBD_00286 1.3e-224 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
DNDPMHBD_00287 7.9e-129 IQ reductase
DNDPMHBD_00288 7.5e-156 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
DNDPMHBD_00289 4.2e-34 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
DNDPMHBD_00290 7.9e-177 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DNDPMHBD_00291 4.2e-77 marR K Transcriptional regulator, MarR family
DNDPMHBD_00292 6.6e-72 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
DNDPMHBD_00294 5.1e-201 xerS L Belongs to the 'phage' integrase family
DNDPMHBD_00295 4.4e-298 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
DNDPMHBD_00296 2.5e-158 rssA S Phospholipase, patatin family
DNDPMHBD_00297 9.4e-118 L Integrase
DNDPMHBD_00298 3.6e-152 EG EamA-like transporter family
DNDPMHBD_00299 2.5e-129 narI 1.7.5.1 C Nitrate reductase
DNDPMHBD_00300 1.1e-98 narJ C nitrate reductase molybdenum cofactor assembly chaperone
DNDPMHBD_00301 0.0 narH 1.7.5.1 C 4Fe-4S dicluster domain
DNDPMHBD_00302 0.0 narG 1.7.5.1 C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
DNDPMHBD_00303 4.5e-183 moeB 2.7.7.73, 2.7.7.80 H ThiF family
DNDPMHBD_00304 9.8e-83 moaB 2.7.7.75 H May be involved in the biosynthesis of molybdopterin
DNDPMHBD_00305 2e-222 moeA 2.10.1.1 H MoeA N-terminal region (domain I and II)
DNDPMHBD_00306 7.5e-75 mobB 2.10.1.1, 2.7.7.77 H molybdopterin-guanine dinucleotide biosynthesis protein
DNDPMHBD_00307 2.6e-95 mobA 2.7.7.77 H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
DNDPMHBD_00308 3e-44
DNDPMHBD_00309 4.3e-61 comP 2.7.13.3 F Sensor histidine kinase
DNDPMHBD_00310 1.4e-91 comP 2.7.13.3 F Sensor histidine kinase
DNDPMHBD_00311 5.7e-115 nreC K PFAM regulatory protein LuxR
DNDPMHBD_00312 4.6e-18
DNDPMHBD_00313 4.7e-174
DNDPMHBD_00314 1.2e-142 hepT 2.5.1.30, 2.5.1.90 H geranyltranstransferase activity
DNDPMHBD_00315 7.5e-214 narK P Transporter, major facilitator family protein
DNDPMHBD_00316 2.5e-31 moaD 2.8.1.12 H ThiS family
DNDPMHBD_00317 3.5e-62 moaE 2.8.1.12 H MoaE protein
DNDPMHBD_00318 7.3e-77 S Flavodoxin
DNDPMHBD_00319 1.3e-131 fecD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNDPMHBD_00320 2.7e-135 fecE 3.6.3.34 HP AAA domain, putative AbiEii toxin, Type IV TA system
DNDPMHBD_00321 1.1e-173 fecB P Periplasmic binding protein
DNDPMHBD_00322 3e-173
DNDPMHBD_00323 8.1e-73
DNDPMHBD_00324 0.0 S SEC-C Motif Domain Protein
DNDPMHBD_00325 1.8e-50
DNDPMHBD_00326 1.9e-136 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
DNDPMHBD_00327 1.6e-146 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
DNDPMHBD_00328 3.6e-117 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
DNDPMHBD_00329 1e-290 mntH P H( )-stimulated, divalent metal cation uptake system
DNDPMHBD_00330 1.5e-33
DNDPMHBD_00331 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DNDPMHBD_00333 4.3e-228 yxiO S Vacuole effluxer Atg22 like
DNDPMHBD_00334 9.3e-261 npp S type I phosphodiesterase nucleotide pyrophosphatase
DNDPMHBD_00335 6e-239 E amino acid
DNDPMHBD_00336 1.2e-180 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DNDPMHBD_00338 3.3e-211 yxjG_1 E methionine synthase, vitamin-B12 independent
DNDPMHBD_00339 4.6e-41 S Cytochrome B5
DNDPMHBD_00340 5.4e-09 S Cytochrome B5
DNDPMHBD_00341 5.1e-75 elaA S Gnat family
DNDPMHBD_00342 5.4e-121 GM NmrA-like family
DNDPMHBD_00343 2.8e-51 hxlR K Transcriptional regulator, HxlR family
DNDPMHBD_00344 6.3e-108 XK27_02070 S Nitroreductase family
DNDPMHBD_00345 1.2e-82 K Transcriptional regulator, HxlR family
DNDPMHBD_00346 3.6e-233
DNDPMHBD_00347 1.4e-209 EGP Major facilitator Superfamily
DNDPMHBD_00348 1e-256 pepC 3.4.22.40 E aminopeptidase
DNDPMHBD_00349 1.3e-111 ylbE GM NAD dependent epimerase dehydratase family protein
DNDPMHBD_00350 0.0 pepN 3.4.11.2 E aminopeptidase
DNDPMHBD_00351 5.5e-48 K Transcriptional regulator
DNDPMHBD_00352 5e-91 folT S ECF transporter, substrate-specific component
DNDPMHBD_00353 1.9e-197 asnA 6.3.1.1 F aspartate--ammonia ligase
DNDPMHBD_00354 7.8e-257 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
DNDPMHBD_00355 1.3e-120 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
DNDPMHBD_00356 2.1e-197 2.7.7.65 T GGDEF domain
DNDPMHBD_00357 2.9e-82
DNDPMHBD_00358 1.9e-250 pgaC GT2 M Glycosyl transferase
DNDPMHBD_00359 3.1e-139 T EAL domain
DNDPMHBD_00360 4.2e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
DNDPMHBD_00361 2.9e-60 yneR
DNDPMHBD_00362 1.6e-101 qorB 1.6.5.2 GM NmrA-like family
DNDPMHBD_00363 5.8e-13 L Transposase DDE domain
DNDPMHBD_00364 3.2e-110 GM NAD(P)H-binding
DNDPMHBD_00365 1.1e-185 S membrane
DNDPMHBD_00366 6.9e-104 K Transcriptional regulator C-terminal region
DNDPMHBD_00367 7.4e-158 akr5f 1.1.1.346 S reductase
DNDPMHBD_00368 6.2e-133 K Transcriptional regulator
DNDPMHBD_00369 1.8e-184 ansA 3.5.1.1 EJ L-asparaginase, type I
DNDPMHBD_00370 3e-155 ypuA S Protein of unknown function (DUF1002)
DNDPMHBD_00371 1.1e-228 aadAT EK Aminotransferase, class I
DNDPMHBD_00372 3.8e-176 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
DNDPMHBD_00373 6e-154 tesE Q hydratase
DNDPMHBD_00374 2.5e-142 S Alpha beta hydrolase
DNDPMHBD_00375 1.7e-85 lacA S transferase hexapeptide repeat
DNDPMHBD_00376 1.6e-33 K Transcriptional regulator
DNDPMHBD_00377 1.9e-83 C Flavodoxin
DNDPMHBD_00378 7e-10 S Oxidoreductase, aldo keto reductase family protein
DNDPMHBD_00380 9.9e-09 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
DNDPMHBD_00381 1.7e-22 P FAD-binding domain
DNDPMHBD_00382 4.2e-89 dut S Protein conserved in bacteria
DNDPMHBD_00383 5.4e-176
DNDPMHBD_00384 4.8e-149
DNDPMHBD_00385 3.7e-51 S Iron-sulfur cluster assembly protein
DNDPMHBD_00386 2.1e-99 msrA 1.8.4.11, 1.8.4.12 C Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DNDPMHBD_00387 7.4e-155 P Belongs to the nlpA lipoprotein family
DNDPMHBD_00388 3.9e-12
DNDPMHBD_00389 2.2e-218 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
DNDPMHBD_00390 2e-296 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DNDPMHBD_00391 5.2e-264 glnA 6.3.1.2 E glutamine synthetase
DNDPMHBD_00392 3.3e-177 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
DNDPMHBD_00393 5.9e-22 S Protein of unknown function (DUF3042)
DNDPMHBD_00394 3.4e-67 yqhL P Rhodanese-like protein
DNDPMHBD_00395 5.6e-183 glk 2.7.1.2 G Glucokinase
DNDPMHBD_00396 7.4e-36 yqgQ S Bacterial protein of unknown function (DUF910)
DNDPMHBD_00397 1.2e-107 gluP 3.4.21.105 S Peptidase, S54 family
DNDPMHBD_00398 2e-100 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DNDPMHBD_00399 4.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
DNDPMHBD_00400 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
DNDPMHBD_00401 0.0 S membrane
DNDPMHBD_00402 1.8e-66 yneR S Belongs to the HesB IscA family
DNDPMHBD_00403 1.4e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
DNDPMHBD_00404 4.7e-117 udk 2.7.1.48 F Cytidine monophosphokinase
DNDPMHBD_00405 4.3e-115 rlpA M PFAM NLP P60 protein
DNDPMHBD_00406 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
DNDPMHBD_00407 2.3e-198 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
DNDPMHBD_00408 2.6e-58 yodB K Transcriptional regulator, HxlR family
DNDPMHBD_00409 3.1e-92 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
DNDPMHBD_00410 6.3e-145 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DNDPMHBD_00411 3.6e-42 acyP 3.6.1.7 C Belongs to the acylphosphatase family
DNDPMHBD_00412 5.9e-169 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
DNDPMHBD_00413 3e-69 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
DNDPMHBD_00414 9.5e-234 V MatE
DNDPMHBD_00415 1.5e-267 yjeM E Amino Acid
DNDPMHBD_00416 6.3e-279 arlS 2.7.13.3 T Histidine kinase
DNDPMHBD_00417 1.5e-121 K response regulator
DNDPMHBD_00418 1.1e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
DNDPMHBD_00419 2.9e-99 yceD S Uncharacterized ACR, COG1399
DNDPMHBD_00420 5.3e-209 ylbM S Belongs to the UPF0348 family
DNDPMHBD_00421 8.4e-139 yqeM Q Methyltransferase
DNDPMHBD_00422 2.4e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
DNDPMHBD_00423 1.4e-110 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
DNDPMHBD_00424 4.3e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
DNDPMHBD_00425 1.9e-47 yhbY J RNA-binding protein
DNDPMHBD_00426 2.1e-218 yqeH S Ribosome biogenesis GTPase YqeH
DNDPMHBD_00427 2.4e-95 yqeG S HAD phosphatase, family IIIA
DNDPMHBD_00428 3.3e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
DNDPMHBD_00429 2.3e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
DNDPMHBD_00430 3.7e-85 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
DNDPMHBD_00431 8.1e-171 dnaI L Primosomal protein DnaI
DNDPMHBD_00432 2.4e-224 dnaB L replication initiation and membrane attachment
DNDPMHBD_00433 1.2e-79 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DNDPMHBD_00434 6.3e-100 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DNDPMHBD_00435 5.3e-158 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
DNDPMHBD_00436 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DNDPMHBD_00437 5.4e-116 yoaK S Protein of unknown function (DUF1275)
DNDPMHBD_00438 2.1e-63 infB UW LPXTG-motif cell wall anchor domain protein
DNDPMHBD_00439 2.5e-90 UW LPXTG-motif cell wall anchor domain protein
DNDPMHBD_00440 0.0 UW LPXTG-motif cell wall anchor domain protein
DNDPMHBD_00441 6.5e-249 UW LPXTG-motif cell wall anchor domain protein
DNDPMHBD_00442 3.2e-128 UW LPXTG-motif cell wall anchor domain protein
DNDPMHBD_00443 0.0 UW LPXTG-motif cell wall anchor domain protein
DNDPMHBD_00445 5.2e-156 metQ_4 P Belongs to the nlpA lipoprotein family
DNDPMHBD_00446 2.6e-88 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
DNDPMHBD_00447 2.1e-123 O Zinc-dependent metalloprotease
DNDPMHBD_00448 4.1e-115 S Membrane
DNDPMHBD_00449 2.5e-197 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
DNDPMHBD_00450 1.4e-77 S Domain of unknown function (DUF4767)
DNDPMHBD_00451 4.3e-13
DNDPMHBD_00452 1.8e-207 cytX U Belongs to the purine-cytosine permease (2.A.39) family
DNDPMHBD_00453 3.1e-95 wecD3 K PFAM GCN5-related N-acetyltransferase
DNDPMHBD_00454 4.4e-169 P CorA-like Mg2+ transporter protein
DNDPMHBD_00455 3.6e-79
DNDPMHBD_00456 1.5e-120 M Lysin motif
DNDPMHBD_00457 5.5e-193 EGP Major facilitator Superfamily
DNDPMHBD_00458 2.3e-99 ywlG S Belongs to the UPF0340 family
DNDPMHBD_00459 1.2e-157 spoU 2.1.1.185 J Methyltransferase
DNDPMHBD_00460 5.2e-265 glnP P ABC transporter
DNDPMHBD_00461 1.4e-138 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
DNDPMHBD_00462 1.5e-221 cycA E Amino acid permease
DNDPMHBD_00463 1.5e-217 nupG F Nucleoside transporter
DNDPMHBD_00464 6.6e-170 rihC 3.2.2.1 F Nucleoside
DNDPMHBD_00465 7.2e-161 fadB4 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
DNDPMHBD_00466 6.1e-126 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
DNDPMHBD_00467 4.9e-147 noc K Belongs to the ParB family
DNDPMHBD_00468 3.6e-140 soj D Sporulation initiation inhibitor
DNDPMHBD_00469 1.3e-154 spo0J K Belongs to the ParB family
DNDPMHBD_00470 2e-31 yyzM S Bacterial protein of unknown function (DUF951)
DNDPMHBD_00471 8.8e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
DNDPMHBD_00472 3.1e-136 XK27_01040 S Protein of unknown function (DUF1129)
DNDPMHBD_00473 3.7e-117 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
DNDPMHBD_00474 4.1e-236 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
DNDPMHBD_00475 1.7e-235 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
DNDPMHBD_00476 1.1e-130 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
DNDPMHBD_00477 4.7e-171 deoR K sugar-binding domain protein
DNDPMHBD_00478 5.9e-208 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
DNDPMHBD_00479 3.8e-125 K response regulator
DNDPMHBD_00480 2.4e-201 hpk31 2.7.13.3 T Histidine kinase
DNDPMHBD_00481 2.9e-141 azlC E AzlC protein
DNDPMHBD_00482 5.6e-53 azlD S branched-chain amino acid
DNDPMHBD_00483 2.2e-130 K LysR substrate binding domain
DNDPMHBD_00484 3.9e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
DNDPMHBD_00485 2e-244 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
DNDPMHBD_00486 4.2e-172 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
DNDPMHBD_00487 6e-129 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
DNDPMHBD_00488 5.1e-116 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DNDPMHBD_00489 1e-116 thiE 2.5.1.3, 2.7.6.2, 5.4.2.6 S Haloacid dehalogenase-like hydrolase
DNDPMHBD_00490 1e-95 ribA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
DNDPMHBD_00491 1.5e-230 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
DNDPMHBD_00492 2.6e-170 K AI-2E family transporter
DNDPMHBD_00493 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
DNDPMHBD_00494 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
DNDPMHBD_00495 2.3e-125 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
DNDPMHBD_00496 2.2e-186 thrC 4.2.3.1 E Threonine synthase
DNDPMHBD_00497 5.8e-172 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
DNDPMHBD_00498 2.1e-101 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
DNDPMHBD_00499 1.1e-83 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DNDPMHBD_00500 3e-215 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DNDPMHBD_00501 1.5e-252 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DNDPMHBD_00502 3.3e-132 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
DNDPMHBD_00503 1.8e-37 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DNDPMHBD_00504 3.1e-127 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DNDPMHBD_00505 3.7e-193 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DNDPMHBD_00506 3e-109 2.7.13.3 T GHKL domain
DNDPMHBD_00507 7.9e-108 K LytTr DNA-binding domain
DNDPMHBD_00509 5e-75 osmC O OsmC-like protein
DNDPMHBD_00510 1.4e-181 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DNDPMHBD_00511 4.4e-222 patA 2.6.1.1 E Aminotransferase
DNDPMHBD_00512 8.4e-34
DNDPMHBD_00513 0.0 clpL O associated with various cellular activities
DNDPMHBD_00514 1.7e-207 menC 4.2.1.113 H Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)
DNDPMHBD_00516 3.9e-107 wecD3 K PFAM GCN5-related N-acetyltransferase
DNDPMHBD_00517 2.4e-286 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DNDPMHBD_00518 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
DNDPMHBD_00519 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
DNDPMHBD_00520 1.5e-172 malR K Transcriptional regulator, LacI family
DNDPMHBD_00521 8.8e-215 phbA 2.3.1.9 I Belongs to the thiolase family
DNDPMHBD_00522 1.1e-256 malT G Major Facilitator
DNDPMHBD_00523 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
DNDPMHBD_00524 5.4e-121 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
DNDPMHBD_00525 1.3e-71
DNDPMHBD_00526 1.7e-87 2.7.6.5 T Region found in RelA / SpoT proteins
DNDPMHBD_00527 1.5e-115 K response regulator
DNDPMHBD_00528 4.2e-223 sptS 2.7.13.3 T Histidine kinase
DNDPMHBD_00529 7.2e-209 yfeO P Voltage gated chloride channel
DNDPMHBD_00530 9.6e-258 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
DNDPMHBD_00531 2.1e-134 puuD S peptidase C26
DNDPMHBD_00532 1.9e-166 yvgN C Aldo keto reductase
DNDPMHBD_00533 0.0 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
DNDPMHBD_00534 2.3e-87 hmpT S ECF-type riboflavin transporter, S component
DNDPMHBD_00535 8.4e-262 nox C NADH oxidase
DNDPMHBD_00536 3.8e-187 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
DNDPMHBD_00537 1.8e-253 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DNDPMHBD_00538 1e-81
DNDPMHBD_00539 1.4e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
DNDPMHBD_00541 1.4e-113 K Transcriptional regulator, TetR family
DNDPMHBD_00542 2.2e-72
DNDPMHBD_00543 6.3e-105 L Transposase IS66 family
DNDPMHBD_00544 3.8e-14 K Cro/C1-type HTH DNA-binding domain
DNDPMHBD_00546 1.8e-18
DNDPMHBD_00547 1e-263 dtpT U amino acid peptide transporter
DNDPMHBD_00548 2.2e-148 yjjH S Calcineurin-like phosphoesterase
DNDPMHBD_00551 3e-108
DNDPMHBD_00552 7.7e-250 EGP Major facilitator Superfamily
DNDPMHBD_00553 1.2e-302 aspT P Predicted Permease Membrane Region
DNDPMHBD_00554 1.4e-133 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
DNDPMHBD_00555 1.8e-127 gntR1 K UbiC transcription regulator-associated domain protein
DNDPMHBD_00556 4.5e-285 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DNDPMHBD_00557 1.3e-151 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
DNDPMHBD_00558 0.0 yhgF K Tex-like protein N-terminal domain protein
DNDPMHBD_00559 1.1e-83 ydcK S Belongs to the SprT family
DNDPMHBD_00561 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
DNDPMHBD_00562 2.2e-184 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
DNDPMHBD_00563 0.0 S Bacterial membrane protein, YfhO
DNDPMHBD_00564 1.6e-134 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DNDPMHBD_00565 7e-169 I alpha/beta hydrolase fold
DNDPMHBD_00566 3e-212 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
DNDPMHBD_00567 5.4e-119 tcyB E ABC transporter
DNDPMHBD_00568 9.1e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
DNDPMHBD_00569 2.1e-140 tcyA ET Belongs to the bacterial solute-binding protein 3 family
DNDPMHBD_00570 1.7e-267 pepC 3.4.22.40 E Peptidase C1-like family
DNDPMHBD_00571 9.9e-126 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
DNDPMHBD_00572 3.8e-50 HA62_12640 S GCN5-related N-acetyl-transferase
DNDPMHBD_00573 3.1e-98 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
DNDPMHBD_00574 3.5e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DNDPMHBD_00575 5e-207 yacL S domain protein
DNDPMHBD_00576 2.9e-273 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
DNDPMHBD_00577 7.2e-71 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
DNDPMHBD_00578 2.3e-136 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DNDPMHBD_00579 1.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
DNDPMHBD_00580 1.4e-15 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
DNDPMHBD_00581 3.4e-97 nusG K Participates in transcription elongation, termination and antitermination
DNDPMHBD_00582 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
DNDPMHBD_00583 3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
DNDPMHBD_00584 2.3e-226 aadAT EK Aminotransferase, class I
DNDPMHBD_00586 2.9e-243 M Glycosyl transferase family group 2
DNDPMHBD_00587 6.9e-209 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
DNDPMHBD_00588 1.7e-82 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
DNDPMHBD_00589 3.2e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
DNDPMHBD_00590 3.4e-48
DNDPMHBD_00592 7.7e-40 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
DNDPMHBD_00593 6.8e-56 K transcriptional regulator PadR family
DNDPMHBD_00594 2.4e-78 XK27_06920 S Protein of unknown function (DUF1700)
DNDPMHBD_00595 2.3e-136 S Putative adhesin
DNDPMHBD_00596 3.3e-63 P nitric oxide dioxygenase activity
DNDPMHBD_00597 6.3e-106 S Peptidase propeptide and YPEB domain
DNDPMHBD_00598 4e-232 T GHKL domain
DNDPMHBD_00599 1.8e-119 T Transcriptional regulatory protein, C terminal
DNDPMHBD_00600 8.9e-162 mleP3 S Membrane transport protein
DNDPMHBD_00601 2.6e-118 1.1.1.193, 3.5.4.26 H RibD C-terminal domain
DNDPMHBD_00605 2.8e-198 2.7.13.3 T GHKL domain
DNDPMHBD_00606 2.5e-59 K LytTr DNA-binding domain
DNDPMHBD_00607 3.9e-26 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
DNDPMHBD_00608 1e-24
DNDPMHBD_00609 5.2e-19 relB L Addiction module antitoxin, RelB DinJ family
DNDPMHBD_00610 2.5e-86 XK27_08850 J Aminoacyl-tRNA editing domain
DNDPMHBD_00611 1.3e-64 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DNDPMHBD_00612 1.1e-197 V Beta-lactamase
DNDPMHBD_00613 1.9e-95 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
DNDPMHBD_00614 8.3e-125 yhiD S MgtC family
DNDPMHBD_00615 7e-118 S GyrI-like small molecule binding domain
DNDPMHBD_00616 1.5e-07
DNDPMHBD_00617 1.7e-111 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
DNDPMHBD_00618 7.1e-50 azlD E Branched-chain amino acid transport
DNDPMHBD_00619 1.5e-118 azlC E azaleucine resistance protein AzlC
DNDPMHBD_00620 1.3e-254 K Aminotransferase class I and II
DNDPMHBD_00621 1.5e-294 S amidohydrolase
DNDPMHBD_00622 1.2e-165 S reductase
DNDPMHBD_00624 5.2e-92 2.3.1.183 M Acetyltransferase GNAT family
DNDPMHBD_00625 1.7e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
DNDPMHBD_00626 1.4e-247 yxbA 6.3.1.12 S ATP-grasp enzyme
DNDPMHBD_00627 1.4e-292 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DNDPMHBD_00628 0.0 asnB 6.3.5.4 E Asparagine synthase
DNDPMHBD_00629 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
DNDPMHBD_00630 3.1e-251 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
DNDPMHBD_00631 1.8e-131 jag S R3H domain protein
DNDPMHBD_00632 4.5e-130 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
DNDPMHBD_00633 2e-58 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
DNDPMHBD_00634 3.4e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
DNDPMHBD_00635 2.2e-251 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
DNDPMHBD_00636 2.2e-207 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
DNDPMHBD_00637 1.7e-34 yaaA S S4 domain protein YaaA
DNDPMHBD_00638 2.1e-205 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DNDPMHBD_00639 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DNDPMHBD_00640 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DNDPMHBD_00641 1.2e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
DNDPMHBD_00642 7.5e-79 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
DNDPMHBD_00643 1.6e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DNDPMHBD_00644 5.8e-291 clcA P chloride
DNDPMHBD_00645 1.8e-34 secG U Preprotein translocase
DNDPMHBD_00646 2.2e-145 est 3.1.1.1 S Serine aminopeptidase, S33
DNDPMHBD_00647 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
DNDPMHBD_00648 1.4e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
DNDPMHBD_00649 6.3e-105 yxjI
DNDPMHBD_00650 6.2e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
DNDPMHBD_00651 3.8e-179 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
DNDPMHBD_00652 5.9e-82 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
DNDPMHBD_00653 6.1e-88 K Acetyltransferase (GNAT) domain
DNDPMHBD_00654 1.3e-75 S PAS domain
DNDPMHBD_00655 3e-101 dnaQ 2.7.7.7 L DNA polymerase III
DNDPMHBD_00656 3.6e-168 murB 1.3.1.98 M Cell wall formation
DNDPMHBD_00657 2.7e-166 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DNDPMHBD_00658 3e-66 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
DNDPMHBD_00659 3.7e-249 fucP G Major Facilitator Superfamily
DNDPMHBD_00660 5e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
DNDPMHBD_00661 7.6e-126 ybbR S YbbR-like protein
DNDPMHBD_00662 3.2e-253 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DNDPMHBD_00663 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
DNDPMHBD_00664 4.8e-51
DNDPMHBD_00665 0.0 oatA I Acyltransferase
DNDPMHBD_00666 1.8e-78 K Transcriptional regulator
DNDPMHBD_00667 1.1e-147 XK27_02985 S Cof-like hydrolase
DNDPMHBD_00668 1.8e-78 lytE M Lysin motif
DNDPMHBD_00670 1.2e-134 K response regulator
DNDPMHBD_00671 8.1e-274 yclK 2.7.13.3 T Histidine kinase
DNDPMHBD_00672 2.8e-154 glcU U sugar transport
DNDPMHBD_00673 1.2e-98 lacA 2.3.1.79 S Transferase hexapeptide repeat
DNDPMHBD_00674 1.7e-262 pgi 5.3.1.9 G Belongs to the GPI family
DNDPMHBD_00675 3.9e-25
DNDPMHBD_00677 5.6e-32 xylB 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
DNDPMHBD_00678 9.5e-155 KT YcbB domain
DNDPMHBD_00679 2.6e-191 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DNDPMHBD_00680 9.5e-172 arcC 2.7.2.2 E Belongs to the carbamate kinase family
DNDPMHBD_00681 1.7e-160 EG EamA-like transporter family
DNDPMHBD_00682 7.6e-48 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
DNDPMHBD_00683 2.4e-49 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
DNDPMHBD_00684 0.0 copA 3.6.3.54 P P-type ATPase
DNDPMHBD_00685 3.1e-86
DNDPMHBD_00687 2.3e-56
DNDPMHBD_00688 6.3e-34 yjcE P Sodium proton antiporter
DNDPMHBD_00694 1.7e-14 arpU S Phage transcriptional regulator, ArpU family
DNDPMHBD_00695 5.2e-106 S D5 N terminal like
DNDPMHBD_00696 3.6e-47
DNDPMHBD_00698 3.3e-12
DNDPMHBD_00700 1.3e-16 S Helix-turn-helix domain
DNDPMHBD_00702 3.9e-132 L Belongs to the 'phage' integrase family
DNDPMHBD_00703 3.1e-92
DNDPMHBD_00704 0.0 M domain protein
DNDPMHBD_00705 4.8e-20
DNDPMHBD_00706 8.8e-187 ampC V Beta-lactamase
DNDPMHBD_00707 2.9e-237 arcA 3.5.3.6 E Arginine
DNDPMHBD_00708 2.7e-79 argR K Regulates arginine biosynthesis genes
DNDPMHBD_00709 7.5e-261 E Arginine ornithine antiporter
DNDPMHBD_00710 1e-222 arcD U Amino acid permease
DNDPMHBD_00711 2.3e-10
DNDPMHBD_00712 1.4e-135 cobQ S CobB/CobQ-like glutamine amidotransferase domain
DNDPMHBD_00713 3.4e-263 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain
DNDPMHBD_00714 2.3e-107 tdk 2.7.1.21 F thymidine kinase
DNDPMHBD_00715 1.2e-194 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DNDPMHBD_00716 7.3e-166 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
DNDPMHBD_00717 4.7e-196 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
DNDPMHBD_00718 2.9e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DNDPMHBD_00719 6.6e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
DNDPMHBD_00720 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DNDPMHBD_00721 9.9e-192 yibE S overlaps another CDS with the same product name
DNDPMHBD_00722 2e-130 yibF S overlaps another CDS with the same product name
DNDPMHBD_00723 5.9e-233 pyrP F Permease
DNDPMHBD_00724 7.6e-121 atpB C it plays a direct role in the translocation of protons across the membrane
DNDPMHBD_00725 1.5e-14 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DNDPMHBD_00726 1.1e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
DNDPMHBD_00727 5.1e-93 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DNDPMHBD_00728 1.5e-283 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
DNDPMHBD_00729 1.9e-164 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
DNDPMHBD_00730 1.1e-267 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
DNDPMHBD_00731 1e-67 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
DNDPMHBD_00732 1.3e-33 ywzB S Protein of unknown function (DUF1146)
DNDPMHBD_00733 1e-240 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DNDPMHBD_00734 1.9e-178 mbl D Cell shape determining protein MreB Mrl
DNDPMHBD_00735 1e-31 S Protein of unknown function (DUF2969)
DNDPMHBD_00736 1.1e-220 rodA D Belongs to the SEDS family
DNDPMHBD_00737 1.4e-47 gcvH E glycine cleavage
DNDPMHBD_00738 1.8e-217 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
DNDPMHBD_00739 6.7e-106 2.3.1.19 K Helix-turn-helix XRE-family like proteins
DNDPMHBD_00740 1.6e-82 usp6 T universal stress protein
DNDPMHBD_00741 3.7e-45
DNDPMHBD_00742 1.1e-242 rarA L recombination factor protein RarA
DNDPMHBD_00743 3.5e-85 yueI S Protein of unknown function (DUF1694)
DNDPMHBD_00744 4.5e-21
DNDPMHBD_00745 1.8e-74 4.4.1.5 E Glyoxalase
DNDPMHBD_00746 7.2e-138 S Membrane
DNDPMHBD_00747 1.4e-141 S Belongs to the UPF0246 family
DNDPMHBD_00748 0.0 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
DNDPMHBD_00749 1.5e-263 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
DNDPMHBD_00750 8.5e-97 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
DNDPMHBD_00751 9e-185 gadC E amino acid
DNDPMHBD_00752 6.7e-270 gadB 4.1.1.15 E Belongs to the group II decarboxylase family
DNDPMHBD_00753 2.2e-112 pbuG S permease
DNDPMHBD_00754 2.7e-62 pbuG S permease
DNDPMHBD_00755 3.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DNDPMHBD_00756 1.9e-239 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
DNDPMHBD_00757 1.7e-215 iscS2 2.8.1.7 E Aminotransferase class V
DNDPMHBD_00758 8.5e-229 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DNDPMHBD_00759 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
DNDPMHBD_00760 1.5e-272 cydA 1.10.3.14 C ubiquinol oxidase
DNDPMHBD_00761 4.1e-184 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
DNDPMHBD_00762 2.3e-309 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
DNDPMHBD_00763 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DNDPMHBD_00764 1.8e-231 ndh 1.6.99.3 C NADH dehydrogenase
DNDPMHBD_00765 1.1e-242 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
DNDPMHBD_00766 4.7e-122 radC L DNA repair protein
DNDPMHBD_00767 1.7e-179 mreB D cell shape determining protein MreB
DNDPMHBD_00768 5e-151 mreC M Involved in formation and maintenance of cell shape
DNDPMHBD_00769 8.7e-93 mreD M rod shape-determining protein MreD
DNDPMHBD_00770 3.2e-102 glnP P ABC transporter permease
DNDPMHBD_00771 2.7e-117 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
DNDPMHBD_00772 2.6e-160 aatB ET ABC transporter substrate-binding protein
DNDPMHBD_00773 2.3e-229 ymfF S Peptidase M16 inactive domain protein
DNDPMHBD_00774 3e-248 ymfH S Peptidase M16
DNDPMHBD_00775 2.6e-138 ymfM S Helix-turn-helix domain
DNDPMHBD_00776 2.5e-101 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DNDPMHBD_00777 3.3e-228 cinA 3.5.1.42 S Belongs to the CinA family
DNDPMHBD_00778 7.6e-197 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DNDPMHBD_00779 9.5e-209 rny S Endoribonuclease that initiates mRNA decay
DNDPMHBD_00780 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
DNDPMHBD_00781 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
DNDPMHBD_00782 1.1e-101 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
DNDPMHBD_00783 3.4e-191 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
DNDPMHBD_00784 2.3e-185 tgt_1 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
DNDPMHBD_00785 8.2e-31 yajC U Preprotein translocase
DNDPMHBD_00786 3.2e-183 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
DNDPMHBD_00787 1.1e-232 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
DNDPMHBD_00788 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DNDPMHBD_00789 4.1e-43 yrzL S Belongs to the UPF0297 family
DNDPMHBD_00790 3.6e-76 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DNDPMHBD_00791 6.1e-48 yrzB S Belongs to the UPF0473 family
DNDPMHBD_00792 6.6e-85 cvpA S Colicin V production protein
DNDPMHBD_00793 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
DNDPMHBD_00794 5.1e-53 trxA O Belongs to the thioredoxin family
DNDPMHBD_00795 1.6e-97 yslB S Protein of unknown function (DUF2507)
DNDPMHBD_00796 2.3e-142 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
DNDPMHBD_00797 4.8e-105 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
DNDPMHBD_00798 2.9e-93 S Phosphoesterase
DNDPMHBD_00799 2.2e-73 ykuL S (CBS) domain
DNDPMHBD_00800 7.5e-152 3.1.3.102, 3.1.3.104, 3.1.3.23 S haloacid dehalogenase-like hydrolase
DNDPMHBD_00801 8.1e-149 ykuT M mechanosensitive ion channel
DNDPMHBD_00802 6.5e-38 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
DNDPMHBD_00803 1.1e-27
DNDPMHBD_00804 3e-130 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
DNDPMHBD_00805 1.2e-180 ccpA K catabolite control protein A
DNDPMHBD_00806 2.1e-133
DNDPMHBD_00807 3.8e-131 yebC K Transcriptional regulatory protein
DNDPMHBD_00808 7.9e-185 comGA NU Type II IV secretion system protein
DNDPMHBD_00809 2.2e-185 comGB NU type II secretion system
DNDPMHBD_00810 7.1e-47 comGC U competence protein ComGC
DNDPMHBD_00811 2.2e-78 NU general secretion pathway protein
DNDPMHBD_00812 1.1e-41
DNDPMHBD_00813 3.1e-69
DNDPMHBD_00815 7.7e-146 ytxK 2.1.1.72 L N-6 DNA Methylase
DNDPMHBD_00816 5.8e-222 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DNDPMHBD_00817 4.9e-75 S Calcineurin-like phosphoesterase
DNDPMHBD_00818 6.6e-93 yutD S Protein of unknown function (DUF1027)
DNDPMHBD_00819 1.9e-133 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
DNDPMHBD_00820 1.9e-102 S Protein of unknown function (DUF1461)
DNDPMHBD_00821 5.5e-110 dedA S SNARE-like domain protein
DNDPMHBD_00822 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DNDPMHBD_00823 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DNDPMHBD_00824 1e-110 K Bacterial regulatory proteins, tetR family
DNDPMHBD_00825 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
DNDPMHBD_00826 4.4e-77 ctsR K Belongs to the CtsR family
DNDPMHBD_00827 2.1e-196 adhP 1.1.1.1 C alcohol dehydrogenase
DNDPMHBD_00828 1.1e-178 S Hydrolases of the alpha beta superfamily
DNDPMHBD_00834 1.1e-113 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
DNDPMHBD_00835 3.3e-275 lysP E amino acid
DNDPMHBD_00836 1.3e-09 2.3.1.128 J Acetyltransferase (GNAT) domain
DNDPMHBD_00837 2e-118 lssY 3.6.1.27 I phosphatase
DNDPMHBD_00838 2.1e-82 S Threonine/Serine exporter, ThrE
DNDPMHBD_00839 2.1e-129 thrE S Putative threonine/serine exporter
DNDPMHBD_00840 1e-30 cspC K Cold shock protein
DNDPMHBD_00841 2.4e-124 sirR K iron dependent repressor
DNDPMHBD_00842 9.1e-167 czcD P cation diffusion facilitator family transporter
DNDPMHBD_00843 2.9e-117 S membrane
DNDPMHBD_00844 4.9e-109 S VIT family
DNDPMHBD_00845 2.7e-82 usp1 T Belongs to the universal stress protein A family
DNDPMHBD_00846 6.9e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
DNDPMHBD_00847 1.3e-151 glnH ET ABC transporter
DNDPMHBD_00848 1.6e-109 gluC P ABC transporter permease
DNDPMHBD_00849 4e-108 glnP P ABC transporter permease
DNDPMHBD_00850 7.7e-219 S CAAX protease self-immunity
DNDPMHBD_00851 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DNDPMHBD_00852 9.3e-56
DNDPMHBD_00853 3.4e-74 merR K MerR HTH family regulatory protein
DNDPMHBD_00854 4.7e-269 lmrB EGP Major facilitator Superfamily
DNDPMHBD_00855 1.4e-117 S Domain of unknown function (DUF4811)
DNDPMHBD_00856 8.9e-164 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
DNDPMHBD_00858 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
DNDPMHBD_00859 2.7e-87
DNDPMHBD_00860 5e-116 dck 2.7.1.74 F deoxynucleoside kinase
DNDPMHBD_00861 1.7e-185 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
DNDPMHBD_00862 4.3e-86 uspA T Belongs to the universal stress protein A family
DNDPMHBD_00863 8.1e-276 pepV 3.5.1.18 E dipeptidase PepV
DNDPMHBD_00864 7e-153 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DNDPMHBD_00865 2.9e-256 ytgP S Polysaccharide biosynthesis protein
DNDPMHBD_00866 7.6e-42
DNDPMHBD_00867 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
DNDPMHBD_00868 5.6e-217 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DNDPMHBD_00869 1.6e-91 tag 3.2.2.20 L glycosylase
DNDPMHBD_00870 1.8e-257 EGP Major facilitator Superfamily
DNDPMHBD_00871 1.3e-84 perR P Belongs to the Fur family
DNDPMHBD_00872 5.3e-232 cycA E Amino acid permease
DNDPMHBD_00873 9.7e-103 V VanZ like family
DNDPMHBD_00874 1e-23
DNDPMHBD_00875 2.2e-85 S Short repeat of unknown function (DUF308)
DNDPMHBD_00876 2.2e-78 S Psort location Cytoplasmic, score
DNDPMHBD_00877 3.3e-283 dinB 2.7.7.7 L impB/mucB/samB family C-terminal domain
DNDPMHBD_00878 1e-75 hsp O Belongs to the small heat shock protein (HSP20) family
DNDPMHBD_00879 6.2e-154 yeaE S Aldo keto
DNDPMHBD_00880 1.5e-236 preA 1.3.1.1 C 4Fe-4S dicluster domain
DNDPMHBD_00881 3.6e-235 preT 1.3.1.1 E Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
DNDPMHBD_00882 4.2e-149 xth 3.1.11.2 L exodeoxyribonuclease III
DNDPMHBD_00883 1.1e-87 lytE M LysM domain protein
DNDPMHBD_00884 0.0 oppD EP Psort location Cytoplasmic, score
DNDPMHBD_00885 2.3e-41 lytE M LysM domain protein
DNDPMHBD_00886 2.3e-159 sufD O Uncharacterized protein family (UPF0051)
DNDPMHBD_00887 2e-111 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DNDPMHBD_00888 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
DNDPMHBD_00889 5.3e-235 lmrB EGP Major facilitator Superfamily
DNDPMHBD_00890 6e-97 2.3.1.128 K Acetyltransferase (GNAT) domain
DNDPMHBD_00900 2.2e-93 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
DNDPMHBD_00901 2.1e-182 I Alpha beta
DNDPMHBD_00902 2.8e-266 emrY EGP Major facilitator Superfamily
DNDPMHBD_00903 3.6e-117 ung2 3.2.2.27 L Uracil-DNA glycosylase
DNDPMHBD_00904 9.4e-253 yjjP S Putative threonine/serine exporter
DNDPMHBD_00905 3.9e-159 mleR K LysR family
DNDPMHBD_00906 1.4e-112 ydjP I Alpha/beta hydrolase family
DNDPMHBD_00907 2.8e-146 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
DNDPMHBD_00908 8.7e-271 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
DNDPMHBD_00909 5.3e-159 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
DNDPMHBD_00910 7.9e-40 citD C Covalent carrier of the coenzyme of citrate lyase
DNDPMHBD_00911 5.7e-149 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
DNDPMHBD_00912 1.3e-175 mez_1 1.1.1.38 C Malic enzyme, NAD binding domain
DNDPMHBD_00913 2.3e-125 citR K sugar-binding domain protein
DNDPMHBD_00914 1e-164 citP P Sodium:sulfate symporter transmembrane region
DNDPMHBD_00915 3.1e-130 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
DNDPMHBD_00916 5.3e-267 frdC 1.3.5.4 C FAD binding domain
DNDPMHBD_00917 2.1e-260 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
DNDPMHBD_00918 1.1e-303 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
DNDPMHBD_00919 1.6e-157 mleR K LysR family
DNDPMHBD_00920 2.3e-110 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DNDPMHBD_00921 2.5e-205 adhA 1.1.1.1 C Zinc-binding alcohol dehydrogenase family protein
DNDPMHBD_00922 5e-295 L PFAM plasmid pRiA4b ORF-3 family protein
DNDPMHBD_00923 3.2e-169 L transposase, IS605 OrfB family
DNDPMHBD_00924 9.3e-264 S Uncharacterized protein conserved in bacteria (DUF2252)
DNDPMHBD_00927 2e-22
DNDPMHBD_00928 6e-199 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
DNDPMHBD_00930 1.9e-24 S Domain of unknown function (DUF4767)
DNDPMHBD_00933 4.7e-17
DNDPMHBD_00934 3.5e-10
DNDPMHBD_00935 1.4e-19 S Domain of unknown function (DUF4767)
DNDPMHBD_00936 7.8e-121 agrA K LytTr DNA-binding domain
DNDPMHBD_00937 1.9e-181 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
DNDPMHBD_00938 9.5e-183 iunH2 3.2.2.1 F nucleoside hydrolase
DNDPMHBD_00939 4.3e-138 IQ KR domain
DNDPMHBD_00940 3.3e-133 S membrane transporter protein
DNDPMHBD_00941 2.7e-97 S ABC-type cobalt transport system, permease component
DNDPMHBD_00942 5.8e-250 cbiO1 S ABC transporter, ATP-binding protein
DNDPMHBD_00943 4.1e-113 P Cobalt transport protein
DNDPMHBD_00944 1.6e-52 yvlA
DNDPMHBD_00945 0.0 yjcE P Sodium proton antiporter
DNDPMHBD_00946 3.8e-52 ypaA S Protein of unknown function (DUF1304)
DNDPMHBD_00947 2.8e-190 D Alpha beta
DNDPMHBD_00948 1e-72 K Transcriptional regulator
DNDPMHBD_00949 9.1e-161
DNDPMHBD_00950 1e-134 1.6.5.5 C Zinc-binding dehydrogenase
DNDPMHBD_00951 8.6e-33 1.6.5.5 C Zinc-binding dehydrogenase
DNDPMHBD_00952 1.9e-256 G PTS system Galactitol-specific IIC component
DNDPMHBD_00953 1e-210 EGP Major facilitator Superfamily
DNDPMHBD_00954 3e-135 V ABC transporter
DNDPMHBD_00955 3.9e-109
DNDPMHBD_00956 5.2e-14
DNDPMHBD_00957 7.1e-63
DNDPMHBD_00958 3.9e-195 lplA 6.3.1.20 H Lipoate-protein ligase
DNDPMHBD_00959 2.5e-80 uspA T universal stress protein
DNDPMHBD_00960 0.0 tetP J elongation factor G
DNDPMHBD_00961 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
DNDPMHBD_00962 2e-74 rplI J Binds to the 23S rRNA
DNDPMHBD_00963 3.4e-234 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
DNDPMHBD_00964 1.3e-208 yttB EGP Major facilitator Superfamily
DNDPMHBD_00965 2.5e-58
DNDPMHBD_00966 4.3e-158 S Polyphosphate nucleotide phosphotransferase, PPK2 family
DNDPMHBD_00967 3.4e-100 K DNA-binding helix-turn-helix protein
DNDPMHBD_00969 1.2e-73 K helix_turn_helix multiple antibiotic resistance protein
DNDPMHBD_00970 1.4e-309 lmrA 3.6.3.44 V ABC transporter
DNDPMHBD_00972 6.8e-130 K response regulator
DNDPMHBD_00973 0.0 vicK 2.7.13.3 T Histidine kinase
DNDPMHBD_00974 7.1e-250 yycH S YycH protein
DNDPMHBD_00975 1.7e-151 yycI S YycH protein
DNDPMHBD_00976 5.9e-154 vicX 3.1.26.11 S domain protein
DNDPMHBD_00977 1.7e-216 htrA 3.4.21.107 O serine protease
DNDPMHBD_00978 5.9e-88 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
DNDPMHBD_00979 9.4e-178 ABC-SBP S ABC transporter
DNDPMHBD_00980 4.7e-88 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
DNDPMHBD_00982 1.2e-94 S reductase
DNDPMHBD_00983 4.9e-226 dhaT 1.1.1.1, 1.1.1.202 C Dehydrogenase
DNDPMHBD_00984 1.7e-154 glcU U sugar transport
DNDPMHBD_00985 9.4e-149 E Glyoxalase-like domain
DNDPMHBD_00986 2.3e-145 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DNDPMHBD_00987 2.6e-258 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
DNDPMHBD_00988 4.8e-143 bacG M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DNDPMHBD_00989 2.2e-77 V ABC transporter
DNDPMHBD_00990 8.6e-213 bacI V MacB-like periplasmic core domain
DNDPMHBD_00991 5.2e-39
DNDPMHBD_00992 2.7e-263 S Putative peptidoglycan binding domain
DNDPMHBD_00995 4.3e-31 2.7.13.3 T GHKL domain
DNDPMHBD_00996 7.8e-103 L Transposase IS66 family
DNDPMHBD_00997 1.1e-181 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
DNDPMHBD_00998 3.5e-160 rrmA 2.1.1.187 H Methyltransferase
DNDPMHBD_00999 4.7e-96 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
DNDPMHBD_01000 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
DNDPMHBD_01001 1.2e-10 S Protein of unknown function (DUF4044)
DNDPMHBD_01002 1.7e-57
DNDPMHBD_01003 4.5e-76 mraZ K Belongs to the MraZ family
DNDPMHBD_01004 1.9e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
DNDPMHBD_01005 1.5e-56 ftsL D Cell division protein FtsL
DNDPMHBD_01006 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
DNDPMHBD_01007 2.6e-180 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DNDPMHBD_01008 7.7e-263 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DNDPMHBD_01009 1.8e-201 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DNDPMHBD_01010 6.1e-141 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
DNDPMHBD_01011 2.9e-254 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
DNDPMHBD_01012 3.4e-225 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DNDPMHBD_01013 9.4e-71 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
DNDPMHBD_01014 3.2e-40 yggT S YGGT family
DNDPMHBD_01015 1.3e-145 ylmH S S4 domain protein
DNDPMHBD_01016 1.6e-36 divIVA D DivIVA domain protein
DNDPMHBD_01017 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DNDPMHBD_01018 4.2e-32 cspA K Cold shock protein
DNDPMHBD_01019 1.1e-98 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
DNDPMHBD_01021 1e-125 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DNDPMHBD_01022 4.6e-216 iscS 2.8.1.7 E Aminotransferase class V
DNDPMHBD_01023 2.8e-57 XK27_04120 S Putative amino acid metabolism
DNDPMHBD_01024 3.9e-217 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
DNDPMHBD_01025 3.7e-122 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
DNDPMHBD_01026 9e-119 S Repeat protein
DNDPMHBD_01027 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
DNDPMHBD_01028 8.1e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DNDPMHBD_01029 8.9e-167 GK ROK family
DNDPMHBD_01030 1.8e-240 brnQ U Component of the transport system for branched-chain amino acids
DNDPMHBD_01031 1.3e-69 aroD S Serine hydrolase (FSH1)
DNDPMHBD_01032 1.7e-50 aroD S Serine hydrolase (FSH1)
DNDPMHBD_01033 2.2e-241 yagE E amino acid
DNDPMHBD_01034 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
DNDPMHBD_01035 2.8e-134 gntR K UbiC transcription regulator-associated domain protein
DNDPMHBD_01036 1e-87 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DNDPMHBD_01037 9.8e-285 pipD E Dipeptidase
DNDPMHBD_01038 0.0 yfiC V ABC transporter
DNDPMHBD_01039 8.5e-307 lmrA V ABC transporter, ATP-binding protein
DNDPMHBD_01040 2.4e-189 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DNDPMHBD_01041 6e-134 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
DNDPMHBD_01042 2.3e-162
DNDPMHBD_01043 5.4e-158 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
DNDPMHBD_01044 2.8e-146 S AI-2E family transporter
DNDPMHBD_01045 4.2e-135 XK27_07210 6.1.1.6 S B3 4 domain
DNDPMHBD_01046 2.3e-78 yybA 2.3.1.57 K Transcriptional regulator
DNDPMHBD_01047 1e-90 M1-874 K Domain of unknown function (DUF1836)
DNDPMHBD_01048 1.9e-89 GM epimerase
DNDPMHBD_01049 7.5e-155 ypdB V (ABC) transporter
DNDPMHBD_01050 1.5e-242 yhdP S Transporter associated domain
DNDPMHBD_01051 9.9e-85 nrdI F Belongs to the NrdI family
DNDPMHBD_01052 3.2e-74 S 3-demethylubiquinone-9 3-methyltransferase
DNDPMHBD_01053 3.4e-192 yeaN P Transporter, major facilitator family protein
DNDPMHBD_01054 7.5e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DNDPMHBD_01055 1.4e-275 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
DNDPMHBD_01056 1e-38
DNDPMHBD_01057 0.0 lacS G Transporter
DNDPMHBD_01058 1.6e-79 uspA T universal stress protein
DNDPMHBD_01060 5.4e-137 L the current gene model (or a revised gene model) may contain a
DNDPMHBD_01061 1.6e-12
DNDPMHBD_01063 4.1e-15
DNDPMHBD_01064 5.9e-62 L Psort location Cytoplasmic, score
DNDPMHBD_01065 1.2e-141 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
DNDPMHBD_01066 3.9e-198 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
DNDPMHBD_01067 3.7e-38 Z012_10770 M Domain of unknown function (DUF1919)
DNDPMHBD_01068 6.7e-40 M COG3774 Mannosyltransferase OCH1 and related enzymes
DNDPMHBD_01069 1e-61 cps2I S Psort location CytoplasmicMembrane, score
DNDPMHBD_01071 8.6e-59 M Glycosyltransferase like family 2
DNDPMHBD_01072 2.6e-44 MA20_17390 GT4 M Glycosyl transferases group 1
DNDPMHBD_01073 7e-69 M Glycosyltransferase sugar-binding region containing DXD motif
DNDPMHBD_01074 8.5e-22 2.4.1.315 GT2 M Glycosyltransferase like family 2
DNDPMHBD_01075 4.8e-82 lsgF M Glycosyl transferase family 2
DNDPMHBD_01076 7.7e-51 pglC M Bacterial sugar transferase
DNDPMHBD_01077 3.4e-119 ywqD 2.7.10.1 D Capsular exopolysaccharide family
DNDPMHBD_01078 2.4e-140 epsB M biosynthesis protein
DNDPMHBD_01079 1.7e-166 brpA K Cell envelope-like function transcriptional attenuator common domain protein
DNDPMHBD_01080 7.4e-65 K Transcriptional regulator, HxlR family
DNDPMHBD_01081 1.9e-127
DNDPMHBD_01082 3e-99 K DNA-templated transcription, initiation
DNDPMHBD_01083 2.1e-35
DNDPMHBD_01084 1.9e-89
DNDPMHBD_01085 5.6e-291 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
DNDPMHBD_01086 2.7e-25 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
DNDPMHBD_01087 0.0 yjbQ P TrkA C-terminal domain protein
DNDPMHBD_01088 3e-270 pipD E Dipeptidase
DNDPMHBD_01091 3.8e-26
DNDPMHBD_01092 0.0
DNDPMHBD_01093 0.0
DNDPMHBD_01094 4e-122 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
DNDPMHBD_01095 6.8e-104 fic D Fic/DOC family
DNDPMHBD_01096 3.3e-71
DNDPMHBD_01097 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
DNDPMHBD_01098 1.3e-90 L nuclease
DNDPMHBD_01099 0.0 sbcC L Putative exonuclease SbcCD, C subunit
DNDPMHBD_01100 1.6e-205 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
DNDPMHBD_01101 1.2e-174 M Glycosyl hydrolases family 25
DNDPMHBD_01102 4.1e-144 ywqE 3.1.3.48 GM PHP domain protein
DNDPMHBD_01103 0.0 snf 2.7.11.1 KL domain protein
DNDPMHBD_01105 1e-37
DNDPMHBD_01106 1.5e-67 T Toxin-antitoxin system, toxin component, MazF family
DNDPMHBD_01108 3.1e-251 mmuP E amino acid
DNDPMHBD_01109 5e-120 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
DNDPMHBD_01110 1.7e-66 E Preprotein translocase subunit SecB
DNDPMHBD_01113 5.7e-55 YPO0284 GM NAD(P)H-binding
DNDPMHBD_01116 5.1e-195 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
DNDPMHBD_01117 8.5e-226 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
DNDPMHBD_01118 0.0 secA2 U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
DNDPMHBD_01119 9.7e-158 asp3 S Accessory Sec secretory system ASP3
DNDPMHBD_01120 6.3e-218 asp2 3.4.11.5 S Accessory Sec system GspB-transporter
DNDPMHBD_01121 1.5e-195 M transferase activity, transferring glycosyl groups
DNDPMHBD_01122 1.5e-145 secY2 U Part of the accessory SecA2 SecY2 system specifically required for export of
DNDPMHBD_01123 1.9e-162 nss M transferase activity, transferring glycosyl groups
DNDPMHBD_01125 1.8e-15 sraP UW this gene contains a nucleotide ambiguity which may be the result of a sequencing error
DNDPMHBD_01126 0.0 M LPXTG-motif cell wall anchor domain protein
DNDPMHBD_01127 0.0 trxB2 1.8.1.9 C Thioredoxin domain
DNDPMHBD_01128 4.6e-105 ahpC 1.11.1.15 O Peroxiredoxin
DNDPMHBD_01129 6.7e-143 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
DNDPMHBD_01130 1.7e-119 sdaAB 4.3.1.17 E Serine dehydratase beta chain
DNDPMHBD_01132 1.5e-39 ykuJ S Protein of unknown function (DUF1797)
DNDPMHBD_01133 9.7e-178 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
DNDPMHBD_01134 5.9e-199 cpoA GT4 M Glycosyltransferase, group 1 family protein
DNDPMHBD_01135 4.5e-230 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
DNDPMHBD_01136 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DNDPMHBD_01137 2.7e-39 ptsH G phosphocarrier protein HPR
DNDPMHBD_01138 2.9e-27
DNDPMHBD_01139 0.0 clpE O Belongs to the ClpA ClpB family
DNDPMHBD_01140 1.7e-100 S Pfam:DUF3816
DNDPMHBD_01141 8e-142 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G MucBP domain
DNDPMHBD_01142 2.5e-113
DNDPMHBD_01143 2.6e-155 V ABC transporter, ATP-binding protein
DNDPMHBD_01144 9.3e-65 gntR1 K Transcriptional regulator, GntR family
DNDPMHBD_01145 3.3e-48 M NlpC P60 family protein
DNDPMHBD_01146 4e-109 S Peptidase, M23
DNDPMHBD_01147 3.7e-60 M Peptidase_C39 like family
DNDPMHBD_01148 2.9e-255 ganB 3.2.1.89 G arabinogalactan
DNDPMHBD_01149 5.3e-09 S Domain of unknown function (DUF4767)
DNDPMHBD_01150 9.6e-40 S Acyltransferase family
DNDPMHBD_01151 1.5e-220 V domain protein
DNDPMHBD_01152 1.6e-94 K Transcriptional regulator (TetR family)
DNDPMHBD_01153 3.7e-38 pspC KT PspC domain protein
DNDPMHBD_01154 9.9e-152
DNDPMHBD_01155 3.1e-17 3.2.1.14 GH18
DNDPMHBD_01156 1.5e-82 zur P Belongs to the Fur family
DNDPMHBD_01157 1.6e-100 gmk2 2.7.4.8 F Guanylate kinase
DNDPMHBD_01158 4.9e-72 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
DNDPMHBD_01159 8.7e-254 yfnA E Amino Acid
DNDPMHBD_01160 6.5e-227 EGP Sugar (and other) transporter
DNDPMHBD_01161 1.3e-230
DNDPMHBD_01162 1.5e-208 potD P ABC transporter
DNDPMHBD_01163 1.4e-139 potC P ABC transporter permease
DNDPMHBD_01164 4.5e-146 potB P ABC transporter permease
DNDPMHBD_01165 5.9e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
DNDPMHBD_01166 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
DNDPMHBD_01167 3e-178 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
DNDPMHBD_01168 0.0 pacL 3.6.3.8 P P-type ATPase
DNDPMHBD_01169 2.6e-85 dps P Belongs to the Dps family
DNDPMHBD_01170 8.6e-257 yagE E amino acid
DNDPMHBD_01171 7.2e-118 gph 3.1.3.18 S HAD hydrolase, family IA, variant
DNDPMHBD_01172 1.1e-156 3.6.4.12 S PD-(D/E)XK nuclease family transposase
DNDPMHBD_01174 1.2e-115 yrkL S Flavodoxin-like fold
DNDPMHBD_01175 4e-53
DNDPMHBD_01176 2e-15 S Domain of unknown function (DUF4767)
DNDPMHBD_01177 4.5e-135 3.6.4.12 S PD-(D/E)XK nuclease family transposase
DNDPMHBD_01178 1.1e-49
DNDPMHBD_01179 3.4e-205 nrnB S DHHA1 domain
DNDPMHBD_01180 1.3e-232 S Uncharacterized protein conserved in bacteria (DUF2325)
DNDPMHBD_01181 5.4e-248 brnQ U Component of the transport system for branched-chain amino acids
DNDPMHBD_01182 4.9e-105 NU mannosyl-glycoprotein
DNDPMHBD_01183 7.3e-141 S Putative ABC-transporter type IV
DNDPMHBD_01184 2.5e-270 S ABC transporter, ATP-binding protein
DNDPMHBD_01185 8.6e-89 K Helix-turn-helix domain
DNDPMHBD_01186 1.3e-48
DNDPMHBD_01187 6.7e-31 WQ51_00220 K Helix-turn-helix domain
DNDPMHBD_01188 2.2e-100 S Protein of unknown function (DUF3278)
DNDPMHBD_01189 1.8e-08
DNDPMHBD_01190 2.9e-73 M PFAM NLP P60 protein
DNDPMHBD_01191 9.8e-183 ABC-SBP S ABC transporter
DNDPMHBD_01192 1.1e-153 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
DNDPMHBD_01193 3.7e-137 XK27_08845 S ABC transporter, ATP-binding protein
DNDPMHBD_01194 4.1e-93 P Cadmium resistance transporter
DNDPMHBD_01195 4.4e-55 K Transcriptional regulator, ArsR family
DNDPMHBD_01196 1.2e-236 mepA V MATE efflux family protein
DNDPMHBD_01197 8e-54 trxA O Belongs to the thioredoxin family
DNDPMHBD_01198 3e-131 terC P membrane
DNDPMHBD_01199 1.1e-167 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
DNDPMHBD_01200 1.5e-166 corA P CorA-like Mg2+ transporter protein
DNDPMHBD_01201 2.4e-206 gldA 1.1.1.6 C dehydrogenase
DNDPMHBD_01202 1.8e-124 S Alpha beta hydrolase
DNDPMHBD_01203 1.6e-216 dacA 3.4.16.4 M Belongs to the peptidase S11 family
DNDPMHBD_01204 1e-99
DNDPMHBD_01206 1.2e-123 yciB M ErfK YbiS YcfS YnhG
DNDPMHBD_01207 8.1e-260 S Putative peptidoglycan binding domain
DNDPMHBD_01208 9.3e-110 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
DNDPMHBD_01209 3.5e-88
DNDPMHBD_01210 3.4e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
DNDPMHBD_01211 1.2e-216 yttB EGP Major facilitator Superfamily
DNDPMHBD_01212 6.3e-103
DNDPMHBD_01213 1e-24
DNDPMHBD_01214 1.2e-174 scrR K Transcriptional regulator, LacI family
DNDPMHBD_01215 9.7e-239 acm2 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
DNDPMHBD_01216 4.1e-50 czrA K Transcriptional regulator, ArsR family
DNDPMHBD_01217 7.3e-36
DNDPMHBD_01218 0.0 yhcA V ABC transporter, ATP-binding protein
DNDPMHBD_01219 2.6e-118 devA 3.6.3.25 V ABC transporter, ATP-binding protein
DNDPMHBD_01220 2.2e-172 hrtB V ABC transporter permease
DNDPMHBD_01221 5.5e-89 ygfC K transcriptional regulator (TetR family)
DNDPMHBD_01222 9.9e-191 tdh 1.1.1.14 E Alcohol dehydrogenase GroES-like domain
DNDPMHBD_01223 3.9e-125 phoU P Plays a role in the regulation of phosphate uptake
DNDPMHBD_01224 1.1e-136 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
DNDPMHBD_01225 6.5e-154 pstA P Phosphate transport system permease protein PstA
DNDPMHBD_01226 2.8e-152 pstC P probably responsible for the translocation of the substrate across the membrane
DNDPMHBD_01227 2.8e-157 pstS P Phosphate
DNDPMHBD_01228 2.4e-130 K Transcriptional regulatory protein, C-terminal domain protein
DNDPMHBD_01229 8.6e-136 cbiO P ABC transporter
DNDPMHBD_01230 3.8e-135 P Cobalt transport protein
DNDPMHBD_01231 8.2e-185 nikMN P PDGLE domain
DNDPMHBD_01232 3.2e-166 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
DNDPMHBD_01233 3.6e-114 ureG KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
DNDPMHBD_01234 1.9e-132 ureF O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
DNDPMHBD_01235 8.6e-78 ureE O Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
DNDPMHBD_01236 0.0 ureC 3.5.1.5 E Amidohydrolase family
DNDPMHBD_01237 2.1e-69 ureB 3.5.1.5 E Urease beta subunit
DNDPMHBD_01238 3.7e-48 ureA 3.5.1.5 E Urease, gamma subunit
DNDPMHBD_01239 5.6e-97 ureI S AmiS/UreI family transporter
DNDPMHBD_01240 6.9e-223 P ammonium transporter
DNDPMHBD_01241 4.4e-17 K Transcriptional regulator, HxlR family
DNDPMHBD_01242 6.9e-184
DNDPMHBD_01243 1.2e-97 2.3.1.128 K acetyltransferase
DNDPMHBD_01244 1.3e-216 L Transposase
DNDPMHBD_01245 2.9e-145
DNDPMHBD_01246 6.4e-99 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DNDPMHBD_01247 0.0 fhaB M Rib/alpha-like repeat
DNDPMHBD_01248 5.7e-98 infB UW LPXTG-motif cell wall anchor domain protein
DNDPMHBD_01249 1.8e-78 K AsnC family
DNDPMHBD_01250 1.6e-228 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
DNDPMHBD_01251 9.5e-96 dedA 3.1.3.1 S SNARE associated Golgi protein
DNDPMHBD_01252 2.7e-180 galR K Transcriptional regulator
DNDPMHBD_01253 2.7e-282 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
DNDPMHBD_01254 5e-226 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
DNDPMHBD_01255 3.5e-177 celE 3.2.1.4 GH5,GH9 E GDSL-like Lipase/Acylhydrolase family
DNDPMHBD_01256 4.4e-146 ptp3 3.1.3.48 T Tyrosine phosphatase family
DNDPMHBD_01257 3.4e-91 yxkA S Phosphatidylethanolamine-binding protein
DNDPMHBD_01258 9.1e-36
DNDPMHBD_01259 7.7e-52
DNDPMHBD_01260 4.3e-203
DNDPMHBD_01261 7.5e-83 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
DNDPMHBD_01262 1.2e-135 pnuC H nicotinamide mononucleotide transporter
DNDPMHBD_01263 5.4e-158 ytbE 1.1.1.346 S Aldo keto reductase
DNDPMHBD_01264 2.6e-126 K response regulator
DNDPMHBD_01265 8.2e-182 T PhoQ Sensor
DNDPMHBD_01266 3.4e-135 macB2 V ABC transporter, ATP-binding protein
DNDPMHBD_01267 0.0 ysaB V FtsX-like permease family
DNDPMHBD_01268 2.4e-158 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
DNDPMHBD_01269 1.2e-169 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
DNDPMHBD_01270 3e-75
DNDPMHBD_01271 5.1e-221 dacA 3.4.16.4 M Belongs to the peptidase S11 family
DNDPMHBD_01272 7.7e-130 ponA V Beta-lactamase enzyme family
DNDPMHBD_01273 1.4e-283 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
DNDPMHBD_01274 9.1e-215 uhpT EGP Major facilitator Superfamily
DNDPMHBD_01275 1.1e-256 ytjP 3.5.1.18 E Dipeptidase
DNDPMHBD_01276 7.5e-275 arcD S C4-dicarboxylate anaerobic carrier
DNDPMHBD_01277 1.3e-179 yfeX P Peroxidase
DNDPMHBD_01278 2.8e-134 lsa S ABC transporter
DNDPMHBD_01279 3.4e-137 I alpha/beta hydrolase fold
DNDPMHBD_01280 2.1e-180 MA20_14895 S Conserved hypothetical protein 698
DNDPMHBD_01281 3.5e-94 S NADPH-dependent FMN reductase
DNDPMHBD_01282 1.6e-171 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
DNDPMHBD_01283 1.8e-178 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
DNDPMHBD_01284 1.1e-231 mntH P H( )-stimulated, divalent metal cation uptake system
DNDPMHBD_01285 9.2e-43 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DNDPMHBD_01286 2.2e-167 T Calcineurin-like phosphoesterase superfamily domain
DNDPMHBD_01287 1.4e-223 mdtG EGP Major facilitator Superfamily
DNDPMHBD_01288 2.2e-128 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
DNDPMHBD_01289 6.4e-157 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
DNDPMHBD_01290 7.6e-180 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
DNDPMHBD_01291 8.5e-136 D nuclear chromosome segregation
DNDPMHBD_01292 0.0 lacZ 3.2.1.23 G -beta-galactosidase
DNDPMHBD_01293 0.0 lacS G Transporter
DNDPMHBD_01294 2.8e-185 lacR K Transcriptional regulator
DNDPMHBD_01295 3.7e-173 L transposase, IS605 OrfB family
DNDPMHBD_01296 2.4e-31 S CRISPR-associated protein (Cas_Csn2)
DNDPMHBD_01297 2.3e-10 S CRISPR-associated protein (Cas_Csn2)
DNDPMHBD_01298 1.7e-37 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
DNDPMHBD_01299 6.3e-112 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
DNDPMHBD_01300 3.4e-129 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
DNDPMHBD_01301 0.0 L AAA domain
DNDPMHBD_01302 2.4e-220 yhaO L Ser Thr phosphatase family protein
DNDPMHBD_01303 9.4e-38 yheA S Belongs to the UPF0342 family
DNDPMHBD_01304 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
DNDPMHBD_01305 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
DNDPMHBD_01306 1.6e-151 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
DNDPMHBD_01307 1.1e-167 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
DNDPMHBD_01309 3.3e-40
DNDPMHBD_01310 1e-43
DNDPMHBD_01311 3.9e-215 folP 2.5.1.15 H dihydropteroate synthase
DNDPMHBD_01312 2.7e-103 xtp 2.5.1.15, 3.6.1.66 F Ham1 family
DNDPMHBD_01313 1.2e-230 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
DNDPMHBD_01314 1.8e-104 folE 2.7.6.3, 3.5.4.16 F GTP cyclohydrolase 1
DNDPMHBD_01315 1.3e-90 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
DNDPMHBD_01316 1e-54 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DNDPMHBD_01317 1e-263 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
DNDPMHBD_01318 1.7e-157 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
DNDPMHBD_01319 9.5e-83
DNDPMHBD_01320 4.8e-159 xth 3.1.11.2 L exodeoxyribonuclease III
DNDPMHBD_01321 1.1e-53 S Mazg nucleotide pyrophosphohydrolase
DNDPMHBD_01322 2.9e-34
DNDPMHBD_01323 3.6e-64 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
DNDPMHBD_01324 3.7e-260 yfnA E amino acid
DNDPMHBD_01325 9.9e-143 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
DNDPMHBD_01326 6.9e-92 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
DNDPMHBD_01327 4.1e-40 ylqC S Belongs to the UPF0109 family
DNDPMHBD_01328 2.2e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
DNDPMHBD_01329 7.9e-250 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DNDPMHBD_01330 1.1e-56 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
DNDPMHBD_01331 2.2e-178 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
DNDPMHBD_01332 0.0 smc D Required for chromosome condensation and partitioning
DNDPMHBD_01333 4.2e-132 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
DNDPMHBD_01334 2.9e-38 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
DNDPMHBD_01335 5.2e-187 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
DNDPMHBD_01336 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DNDPMHBD_01337 0.0 yloV S DAK2 domain fusion protein YloV
DNDPMHBD_01338 3e-57 asp S Asp23 family, cell envelope-related function
DNDPMHBD_01339 7e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
DNDPMHBD_01340 7e-121 thiN 2.7.6.2 H thiamine pyrophosphokinase
DNDPMHBD_01341 1.5e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
DNDPMHBD_01342 5e-162 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
DNDPMHBD_01343 0.0 KLT serine threonine protein kinase
DNDPMHBD_01344 6.5e-131 stp 3.1.3.16 T phosphatase
DNDPMHBD_01345 1.5e-250 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DNDPMHBD_01346 9.4e-175 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DNDPMHBD_01347 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DNDPMHBD_01348 1.3e-213 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DNDPMHBD_01349 7.7e-32 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
DNDPMHBD_01350 4.2e-115 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
DNDPMHBD_01351 4.2e-53
DNDPMHBD_01352 2.3e-261 recN L May be involved in recombinational repair of damaged DNA
DNDPMHBD_01353 3.3e-77 argR K Regulates arginine biosynthesis genes
DNDPMHBD_01354 4.1e-150 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
DNDPMHBD_01355 1.7e-154 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
DNDPMHBD_01356 4.8e-42 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DNDPMHBD_01357 2.5e-213 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DNDPMHBD_01358 3.6e-149 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
DNDPMHBD_01359 6.1e-70 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DNDPMHBD_01360 2.2e-70 yqhY S Asp23 family, cell envelope-related function
DNDPMHBD_01361 8.6e-114 J 2'-5' RNA ligase superfamily
DNDPMHBD_01362 6.6e-201 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
DNDPMHBD_01363 8.6e-133 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DNDPMHBD_01364 8.3e-96 S N-acetylmuramoyl-L-alanine amidase activity
DNDPMHBD_01365 5.1e-25 S Bacteriophage holin of superfamily 6 (Holin_LLH)
DNDPMHBD_01367 2.7e-40
DNDPMHBD_01370 1.7e-64 G cellulose 1,4-beta-cellobiosidase activity
DNDPMHBD_01371 4.6e-23
DNDPMHBD_01372 2.5e-119 Z012_12235 S Baseplate J-like protein
DNDPMHBD_01373 3.7e-09 S Protein of unknown function (DUF2634)
DNDPMHBD_01374 4.3e-27
DNDPMHBD_01375 3.2e-89
DNDPMHBD_01376 6.7e-35
DNDPMHBD_01377 7e-53 3.5.1.28 M LysM domain
DNDPMHBD_01378 9.3e-30
DNDPMHBD_01380 2.2e-14
DNDPMHBD_01381 1e-37
DNDPMHBD_01382 1.7e-103 Z012_02110 S Protein of unknown function (DUF3383)
DNDPMHBD_01383 3.7e-23
DNDPMHBD_01385 6.2e-49 Z012_02125
DNDPMHBD_01386 6.7e-30
DNDPMHBD_01387 1.2e-18
DNDPMHBD_01388 1.8e-120
DNDPMHBD_01389 2.3e-31 S Domain of unknown function (DUF4355)
DNDPMHBD_01391 3e-92
DNDPMHBD_01392 3.7e-183 S Phage portal protein, SPP1 Gp6-like
DNDPMHBD_01393 1.4e-189 S Terminase-like family
DNDPMHBD_01394 6.6e-76 xtmA L Terminase small subunit
DNDPMHBD_01397 1.5e-11
DNDPMHBD_01400 4.8e-08 rusA L holliday junction resolvase
DNDPMHBD_01402 6e-22 S Mazg nucleotide pyrophosphohydrolase
DNDPMHBD_01403 4.5e-23
DNDPMHBD_01406 5.6e-29 S HNH endonuclease
DNDPMHBD_01414 1.3e-52 dnaC 3.4.21.53 L IstB-like ATP binding protein
DNDPMHBD_01415 8e-58 S calcium ion binding
DNDPMHBD_01416 1.2e-43 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
DNDPMHBD_01417 2.4e-92 S Putative HNHc nuclease
DNDPMHBD_01418 6.9e-43 S ERF superfamily
DNDPMHBD_01419 1.4e-11 S Bacteriophage Mu Gam like protein
DNDPMHBD_01426 1.4e-64 S DNA binding
DNDPMHBD_01428 1.5e-36 K Helix-turn-helix XRE-family like proteins
DNDPMHBD_01429 5.4e-40 E Zn peptidase
DNDPMHBD_01430 2.2e-84
DNDPMHBD_01431 2.8e-46
DNDPMHBD_01432 3.5e-205 L Belongs to the 'phage' integrase family
DNDPMHBD_01433 1e-44 rpmA J Belongs to the bacterial ribosomal protein bL27 family
DNDPMHBD_01434 1.8e-53 ysxB J Cysteine protease Prp
DNDPMHBD_01435 5.2e-50 rplU J This protein binds to 23S rRNA in the presence of protein L20
DNDPMHBD_01436 2.6e-112 K Transcriptional regulator
DNDPMHBD_01439 8.5e-246 yhdP S Transporter associated domain
DNDPMHBD_01440 0.0 ubiB S ABC1 family
DNDPMHBD_01441 9.6e-144 S DUF218 domain
DNDPMHBD_01442 8.3e-69 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
DNDPMHBD_01443 4.9e-58 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DNDPMHBD_01444 8.5e-54 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DNDPMHBD_01445 0.0 uvrA3 L excinuclease ABC, A subunit
DNDPMHBD_01446 3.9e-122 S SNARE associated Golgi protein
DNDPMHBD_01447 5.4e-231 N Uncharacterized conserved protein (DUF2075)
DNDPMHBD_01448 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DNDPMHBD_01450 1e-254 yifK E Amino acid permease
DNDPMHBD_01451 8.7e-156 endA V DNA/RNA non-specific endonuclease
DNDPMHBD_01452 1.5e-270 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
DNDPMHBD_01453 2.7e-277 tagE2 2.4.1.52 GT4 M Poly(Glycerol-phosphate) alpha-glucosyltransferase
DNDPMHBD_01454 9.3e-272 M protein which possibly mediates interactions of S.aureus with components of the extracellular matrix of higher eukaryotes
DNDPMHBD_01455 0.0 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
DNDPMHBD_01456 1.4e-267 G Major Facilitator
DNDPMHBD_01457 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
DNDPMHBD_01458 4.5e-205 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
DNDPMHBD_01459 4.7e-260 G Major Facilitator
DNDPMHBD_01460 2.3e-179 K Transcriptional regulator, LacI family
DNDPMHBD_01461 1.1e-206 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DNDPMHBD_01462 1.5e-277 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DNDPMHBD_01463 2.2e-193 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
DNDPMHBD_01464 1.8e-104 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DNDPMHBD_01465 1.2e-293 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
DNDPMHBD_01466 2.6e-241 purD 6.3.4.13 F Belongs to the GARS family
DNDPMHBD_01467 1e-130 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DNDPMHBD_01468 7.9e-175
DNDPMHBD_01469 3.4e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DNDPMHBD_01470 2.4e-281 yjeM E Amino Acid
DNDPMHBD_01471 8.6e-257 E Arginine ornithine antiporter
DNDPMHBD_01472 1.3e-220 arcT 2.6.1.1 E Aminotransferase
DNDPMHBD_01473 3.5e-165 map 3.4.11.18 E Methionine Aminopeptidase
DNDPMHBD_01474 6.1e-79 fld C Flavodoxin
DNDPMHBD_01475 1.3e-67 gtcA S Teichoic acid glycosylation protein
DNDPMHBD_01476 1.1e-56
DNDPMHBD_01477 1.7e-207 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
DNDPMHBD_01479 6.7e-232 yfmL L DEAD DEAH box helicase
DNDPMHBD_01480 1.3e-190 mocA S Oxidoreductase
DNDPMHBD_01481 4.5e-61 S Domain of unknown function (DUF4828)
DNDPMHBD_01482 1e-53 K helix_turn_helix, mercury resistance
DNDPMHBD_01483 8.4e-287 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DNDPMHBD_01484 5.3e-196 EGP Major facilitator Superfamily
DNDPMHBD_01485 1.9e-89 ymdB S Macro domain protein
DNDPMHBD_01486 9.6e-26 K Helix-turn-helix domain
DNDPMHBD_01487 0.0 pepO 3.4.24.71 O Peptidase family M13
DNDPMHBD_01488 1.4e-47
DNDPMHBD_01489 2.3e-232 S Putative metallopeptidase domain
DNDPMHBD_01490 4.3e-206 3.1.3.1 S associated with various cellular activities
DNDPMHBD_01491 1.1e-118 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
DNDPMHBD_01492 5.8e-64 yeaO S Protein of unknown function, DUF488
DNDPMHBD_01493 7.2e-253 nox C NADH oxidase
DNDPMHBD_01494 7.4e-242 nox C NADH oxidase
DNDPMHBD_01495 0.0 helD 3.6.4.12 L DNA helicase
DNDPMHBD_01496 3.4e-115 dedA S SNARE associated Golgi protein
DNDPMHBD_01497 1.5e-126 3.1.3.73 G phosphoglycerate mutase
DNDPMHBD_01498 2.4e-226 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DNDPMHBD_01499 1.4e-10
DNDPMHBD_01500 4.4e-31 S Transglycosylase associated protein
DNDPMHBD_01502 1.2e-180 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DNDPMHBD_01503 1.9e-233 pipD E Dipeptidase
DNDPMHBD_01504 2.8e-31 pipD E Dipeptidase
DNDPMHBD_01505 1.6e-241 pbuX F xanthine permease
DNDPMHBD_01506 2.9e-249 nhaC C Na H antiporter NhaC
DNDPMHBD_01507 5.8e-283 S C4-dicarboxylate anaerobic carrier
DNDPMHBD_01508 5.5e-126 pgm3 3.1.3.73 G phosphoglycerate mutase family
DNDPMHBD_01509 3.8e-41
DNDPMHBD_01510 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
DNDPMHBD_01511 5.4e-67 XK27_01125 L PFAM IS66 Orf2 family protein
DNDPMHBD_01513 4e-237 L Transposase
DNDPMHBD_01514 1.8e-76 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
DNDPMHBD_01515 2.7e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
DNDPMHBD_01516 1.4e-121 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
DNDPMHBD_01517 1.2e-199 coiA 3.6.4.12 S Competence protein
DNDPMHBD_01518 1.7e-265 pipD E Dipeptidase
DNDPMHBD_01519 4.7e-114 yjbH Q Thioredoxin
DNDPMHBD_01520 5.2e-116 yjbM 2.7.6.5 S RelA SpoT domain protein
DNDPMHBD_01521 5.1e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DNDPMHBD_01522 5.4e-172 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
DNDPMHBD_01523 9.6e-73 ykoT GT2 M Glycosyl transferase family 2
DNDPMHBD_01524 2.8e-80 M Core-2/I-Branching enzyme
DNDPMHBD_01525 1.3e-63 M Domain of unknown function (DUF4422)
DNDPMHBD_01526 8.7e-28 M biosynthesis protein
DNDPMHBD_01527 1.6e-92 M transferase activity, transferring glycosyl groups
DNDPMHBD_01528 2.1e-70 cps3F
DNDPMHBD_01529 3.8e-119 rfbP 2.7.8.6 M Bacterial sugar transferase
DNDPMHBD_01530 1.3e-173 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
DNDPMHBD_01531 5.7e-146 cps1D M Domain of unknown function (DUF4422)
DNDPMHBD_01532 4.8e-140 recX 2.4.1.337 GT4 S Regulatory protein RecX
DNDPMHBD_01533 4.9e-31
DNDPMHBD_01534 3.9e-34 S Protein of unknown function (DUF2922)
DNDPMHBD_01535 1.8e-151 yihY S Belongs to the UPF0761 family
DNDPMHBD_01536 7.1e-131 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
DNDPMHBD_01537 4e-169 yniA G Phosphotransferase enzyme family
DNDPMHBD_01538 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
DNDPMHBD_01539 3.4e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
DNDPMHBD_01540 3.8e-263 glnPH2 P ABC transporter permease
DNDPMHBD_01541 1.2e-23 rpsU J Belongs to the bacterial ribosomal protein bS21 family
DNDPMHBD_01542 6.6e-70 yqeY S YqeY-like protein
DNDPMHBD_01543 4.9e-187 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
DNDPMHBD_01544 1.1e-236 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
DNDPMHBD_01545 1.7e-265 argH 4.3.2.1 E argininosuccinate lyase
DNDPMHBD_01546 4.9e-86 bioY S BioY family
DNDPMHBD_01547 1.4e-173 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
DNDPMHBD_01548 5.3e-184 phoH T phosphate starvation-inducible protein PhoH
DNDPMHBD_01549 6e-69 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
DNDPMHBD_01550 3.8e-61 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
DNDPMHBD_01551 2.8e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DNDPMHBD_01552 5.8e-146 recO L Involved in DNA repair and RecF pathway recombination
DNDPMHBD_01553 2e-180 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
DNDPMHBD_01554 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
DNDPMHBD_01555 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
DNDPMHBD_01556 1.7e-207 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
DNDPMHBD_01557 9.1e-220 patA 2.6.1.1 E Aminotransferase
DNDPMHBD_01558 7.3e-124 trmK 2.1.1.217 S SAM-dependent methyltransferase
DNDPMHBD_01559 3.3e-152 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DNDPMHBD_01560 1.5e-236 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
DNDPMHBD_01561 2.3e-30 S Protein of unknown function (DUF2929)
DNDPMHBD_01562 0.0 dnaE 2.7.7.7 L DNA polymerase
DNDPMHBD_01563 1.4e-270 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
DNDPMHBD_01564 9.3e-169 cvfB S S1 domain
DNDPMHBD_01565 8.3e-165 xerD D recombinase XerD
DNDPMHBD_01566 6.2e-63 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
DNDPMHBD_01567 5.8e-138 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
DNDPMHBD_01568 2.9e-105 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
DNDPMHBD_01569 3.8e-128 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
DNDPMHBD_01570 5.8e-103 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
DNDPMHBD_01571 4.1e-192 ypbB 5.1.3.1 S Helix-turn-helix domain
DNDPMHBD_01572 1.8e-270 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
DNDPMHBD_01573 2.5e-13 M Lysin motif
DNDPMHBD_01574 3.2e-116 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
DNDPMHBD_01575 1.4e-205 rpsA 1.17.7.4 J Ribosomal protein S1
DNDPMHBD_01576 9.4e-250 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
DNDPMHBD_01577 2.6e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
DNDPMHBD_01578 1.7e-235 S Tetratricopeptide repeat protein
DNDPMHBD_01579 2.4e-223 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
DNDPMHBD_01580 0.0 yfmR S ABC transporter, ATP-binding protein
DNDPMHBD_01581 8.5e-192 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
DNDPMHBD_01582 1.1e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DNDPMHBD_01583 1.2e-112 hlyIII S protein, hemolysin III
DNDPMHBD_01584 4.4e-152 DegV S EDD domain protein, DegV family
DNDPMHBD_01585 1.4e-170 ypmR E lipolytic protein G-D-S-L family
DNDPMHBD_01586 3.7e-108 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
DNDPMHBD_01587 4.4e-35 yozE S Belongs to the UPF0346 family
DNDPMHBD_01588 8.4e-162 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DNDPMHBD_01589 5e-142 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DNDPMHBD_01590 5.4e-161 dprA LU DNA protecting protein DprA
DNDPMHBD_01591 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DNDPMHBD_01592 5.6e-166 lacX 5.1.3.3 G Aldose 1-epimerase
DNDPMHBD_01593 9.5e-107 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
DNDPMHBD_01594 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
DNDPMHBD_01595 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
DNDPMHBD_01596 1.8e-83 F Hydrolase, NUDIX family
DNDPMHBD_01597 3.9e-173 ppaC 3.6.1.1 C inorganic pyrophosphatase
DNDPMHBD_01598 4.1e-68 yqkB S Belongs to the HesB IscA family
DNDPMHBD_01599 1.9e-47
DNDPMHBD_01601 5.3e-89 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
DNDPMHBD_01602 1.3e-61 asp S Asp23 family, cell envelope-related function
DNDPMHBD_01603 2.3e-24
DNDPMHBD_01604 2.1e-94
DNDPMHBD_01605 1.6e-288 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
DNDPMHBD_01606 2.2e-182 K Transcriptional regulator, LacI family
DNDPMHBD_01607 3.4e-231 gntT EG Gluconate
DNDPMHBD_01608 6.1e-293 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
DNDPMHBD_01609 3.7e-96 K Acetyltransferase (GNAT) domain
DNDPMHBD_01610 4.2e-47
DNDPMHBD_01611 2.4e-22
DNDPMHBD_01612 2.3e-52 nylA 3.5.1.4 J Belongs to the amidase family
DNDPMHBD_01613 1.4e-284 nylA 3.5.1.4 J Belongs to the amidase family
DNDPMHBD_01614 5e-44
DNDPMHBD_01615 1.6e-56 yhaI S Protein of unknown function (DUF805)
DNDPMHBD_01616 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
DNDPMHBD_01620 1.5e-11
DNDPMHBD_01623 7.2e-11 T PFAM SpoVT AbrB
DNDPMHBD_01624 2.7e-23 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
DNDPMHBD_01626 2.7e-46 S calcium ion binding
DNDPMHBD_01628 1.3e-25
DNDPMHBD_01629 2.7e-14
DNDPMHBD_01630 1.3e-17 S sequence-specific DNA binding
DNDPMHBD_01631 3.3e-57 sip L Belongs to the 'phage' integrase family
DNDPMHBD_01632 8.4e-18 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
DNDPMHBD_01633 5e-80 Q Methyltransferase
DNDPMHBD_01634 5.3e-116 ktrA P domain protein
DNDPMHBD_01635 1.5e-239 ktrB P Potassium uptake protein
DNDPMHBD_01636 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
DNDPMHBD_01637 5.6e-138 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
DNDPMHBD_01638 1.5e-219 G Glycosyl hydrolases family 8
DNDPMHBD_01639 1.9e-242 ydaM M Glycosyl transferase
DNDPMHBD_01640 1.2e-136
DNDPMHBD_01641 2.4e-143 topA2 5.99.1.2 G Topoisomerase IA
DNDPMHBD_01644 2e-144 clpB O Belongs to the ClpA ClpB family
DNDPMHBD_01649 2.5e-119 ybhL S Belongs to the BI1 family
DNDPMHBD_01650 4.5e-252 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
DNDPMHBD_01651 1.6e-19 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
DNDPMHBD_01652 7e-48 yafQ S Bacterial toxin of type II toxin-antitoxin system, YafQ
DNDPMHBD_01653 2.5e-118 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
DNDPMHBD_01654 1.7e-56 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
DNDPMHBD_01655 7.5e-58 ytzB S Small secreted protein
DNDPMHBD_01656 1.3e-168 glsA 3.5.1.2 E Belongs to the glutaminase family
DNDPMHBD_01657 3.1e-181 iolS C Aldo keto reductase
DNDPMHBD_01658 2.3e-252 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
DNDPMHBD_01659 1.6e-15 A chlorophyll binding
DNDPMHBD_01660 2.1e-32 XK27_00515 D Glucan-binding protein C
DNDPMHBD_01661 7.9e-16 K ORF6N domain
DNDPMHBD_01664 1e-08 nrdH O Glutaredoxin-like protein NrdH
DNDPMHBD_01665 2.1e-51 L Protein of unknown function (DUF3991)
DNDPMHBD_01666 1.1e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
DNDPMHBD_01667 1.7e-218 ecsB U ABC transporter
DNDPMHBD_01668 3.9e-136 ecsA V ABC transporter, ATP-binding protein
DNDPMHBD_01669 8.3e-78 hit FG histidine triad
DNDPMHBD_01672 3.4e-222 S cog cog1373
DNDPMHBD_01673 1.7e-176 coaA 2.7.1.33 F Pantothenic acid kinase
DNDPMHBD_01674 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
DNDPMHBD_01675 3e-159 EG EamA-like transporter family
DNDPMHBD_01676 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
DNDPMHBD_01677 1.2e-199 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DNDPMHBD_01678 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DNDPMHBD_01679 3.4e-35 nrdH O Glutaredoxin
DNDPMHBD_01680 3.5e-91 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
DNDPMHBD_01681 1.6e-300 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DNDPMHBD_01682 7e-47 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
DNDPMHBD_01683 3.3e-109 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
DNDPMHBD_01684 9.7e-39 S Protein of unknown function (DUF2508)
DNDPMHBD_01685 1.5e-115 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DNDPMHBD_01686 1e-51 yaaQ S Cyclic-di-AMP receptor
DNDPMHBD_01687 8.2e-185 holB 2.7.7.7 L DNA polymerase III
DNDPMHBD_01688 1.6e-58 yabA L Involved in initiation control of chromosome replication
DNDPMHBD_01689 1.5e-158 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DNDPMHBD_01690 3.5e-140 fat 3.1.2.21 I Acyl-ACP thioesterase
DNDPMHBD_01691 3.4e-280 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
DNDPMHBD_01692 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
DNDPMHBD_01693 2.4e-173 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
DNDPMHBD_01694 1.5e-194 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
DNDPMHBD_01695 5e-128 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
DNDPMHBD_01696 4.3e-103 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
DNDPMHBD_01697 4.2e-197 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
DNDPMHBD_01698 3e-131 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DNDPMHBD_01699 1.6e-227 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
DNDPMHBD_01700 1.7e-137 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
DNDPMHBD_01701 3.5e-143 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
DNDPMHBD_01702 1.5e-227 mtnE 2.6.1.83 E Aminotransferase
DNDPMHBD_01703 7.3e-183 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DNDPMHBD_01704 0.0 uup S ABC transporter, ATP-binding protein
DNDPMHBD_01705 8.2e-114 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
DNDPMHBD_01707 1.1e-43 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
DNDPMHBD_01708 5.5e-292 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
DNDPMHBD_01709 3.2e-78 S Aminoacyl-tRNA editing domain
DNDPMHBD_01710 1.1e-303 ybeC E amino acid
DNDPMHBD_01711 0.0 ydaO E amino acid
DNDPMHBD_01712 2.7e-39
DNDPMHBD_01713 1.7e-67 rmaI K Transcriptional regulator
DNDPMHBD_01714 2.3e-156 EGP Major facilitator Superfamily
DNDPMHBD_01715 2e-37 EGP Major facilitator Superfamily
DNDPMHBD_01716 2e-109 yvyE 3.4.13.9 S YigZ family
DNDPMHBD_01717 2.1e-249 comFA L Helicase C-terminal domain protein
DNDPMHBD_01718 1.7e-122 comFC S Competence protein
DNDPMHBD_01719 1.3e-96 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DNDPMHBD_01720 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
DNDPMHBD_01721 3.7e-185 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DNDPMHBD_01722 3.1e-32 KT PspC domain protein
DNDPMHBD_01723 4.9e-52 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
DNDPMHBD_01724 4.6e-177 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
DNDPMHBD_01725 2.9e-156 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
DNDPMHBD_01726 3.8e-182 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
DNDPMHBD_01727 1.1e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
DNDPMHBD_01728 2.4e-138 yrjD S LUD domain
DNDPMHBD_01729 1.9e-294 lutB C 4Fe-4S dicluster domain
DNDPMHBD_01730 7e-169 lutA C Cysteine-rich domain
DNDPMHBD_01731 1.7e-173 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
DNDPMHBD_01732 1.4e-204 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
DNDPMHBD_01733 1.9e-161 aatB ET PFAM extracellular solute-binding protein, family 3
DNDPMHBD_01734 3.6e-85 ykhA 3.1.2.20 I Thioesterase superfamily
DNDPMHBD_01735 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
DNDPMHBD_01736 9.6e-115 yfbR S HD containing hydrolase-like enzyme
DNDPMHBD_01737 6.9e-14
DNDPMHBD_01738 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
DNDPMHBD_01739 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
DNDPMHBD_01740 2.4e-245 steT E amino acid
DNDPMHBD_01741 9.2e-161 rapZ S Displays ATPase and GTPase activities
DNDPMHBD_01742 6.5e-187 ybhK S Required for morphogenesis under gluconeogenic growth conditions
DNDPMHBD_01743 3.1e-170 whiA K May be required for sporulation
DNDPMHBD_01745 8.8e-15
DNDPMHBD_01746 2.4e-240 glpT G Major Facilitator Superfamily
DNDPMHBD_01747 2.1e-103 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
DNDPMHBD_01749 1.1e-189 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
DNDPMHBD_01750 2.4e-228 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
DNDPMHBD_01751 4.8e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
DNDPMHBD_01752 4.2e-250 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
DNDPMHBD_01753 5.6e-245 yifK E Amino acid permease
DNDPMHBD_01754 2.9e-265 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DNDPMHBD_01755 4.9e-102 nqr 1.5.1.36 S reductase
DNDPMHBD_01756 3.6e-198 XK27_09615 S reductase
DNDPMHBD_01757 3.4e-177 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
DNDPMHBD_01758 1.8e-43 hxlR K Transcriptional regulator, HxlR family
DNDPMHBD_01759 2.4e-160 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
DNDPMHBD_01760 4.3e-76 tra L Transposase and inactivated derivatives, IS30 family
DNDPMHBD_01761 6.9e-67 L transposase and inactivated derivatives, IS30 family
DNDPMHBD_01762 4.3e-302 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
DNDPMHBD_01763 1.6e-227 clcA_2 P Chloride transporter, ClC family
DNDPMHBD_01764 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
DNDPMHBD_01765 6.4e-111 lssY 3.6.1.27 I Acid phosphatase homologues
DNDPMHBD_01768 1.9e-43
DNDPMHBD_01769 2e-115 S CAAX protease self-immunity
DNDPMHBD_01770 2.1e-32
DNDPMHBD_01771 8e-163 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DNDPMHBD_01772 6.1e-188 rbsR K Periplasmic binding proteins and sugar binding domain of LacI family
DNDPMHBD_01773 3e-18
DNDPMHBD_01774 2.1e-12 UW LPXTG-motif cell wall anchor domain protein
DNDPMHBD_01775 3.8e-251 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
DNDPMHBD_01796 9e-62 XK27_01125 L PFAM IS66 Orf2 family protein
DNDPMHBD_01797 6.1e-277 L Transposase IS66 family
DNDPMHBD_01798 4.4e-36 hsdM 2.1.1.72 V type I restriction-modification system
DNDPMHBD_01799 9.3e-55 hsdS 3.1.21.3 V type I restriction modification DNA specificity domain
DNDPMHBD_01800 8.9e-178 L Belongs to the 'phage' integrase family
DNDPMHBD_01801 1.4e-83 3.1.21.3 L Type I restriction modification DNA specificity domain
DNDPMHBD_01802 5.7e-38 higA K Helix-turn-helix XRE-family like proteins
DNDPMHBD_01803 1.4e-44 S RelE-like toxin of type II toxin-antitoxin system HigB
DNDPMHBD_01804 3.3e-59 3.1.21.3 V Type I restriction modification DNA specificity domain
DNDPMHBD_01805 8.4e-165 L restriction endonuclease
DNDPMHBD_01806 4.1e-65 L restriction endonuclease
DNDPMHBD_01807 4.6e-45 mrr L restriction endonuclease
DNDPMHBD_01808 0.0 L PLD-like domain
DNDPMHBD_01810 6.2e-179 rihA 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
DNDPMHBD_01811 2.6e-197 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DNDPMHBD_01812 1.4e-99 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
DNDPMHBD_01813 9.7e-222 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
DNDPMHBD_01814 2.2e-76 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
DNDPMHBD_01815 3.9e-104 T Ion transport 2 domain protein
DNDPMHBD_01816 0.0 S Bacterial membrane protein YfhO
DNDPMHBD_01817 2.1e-200 G Transporter, major facilitator family protein
DNDPMHBD_01818 7.1e-109 yvrI K sigma factor activity
DNDPMHBD_01819 1.3e-63 ydiI Q Thioesterase superfamily
DNDPMHBD_01820 5.8e-157 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
DNDPMHBD_01821 2.3e-270 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
DNDPMHBD_01822 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
DNDPMHBD_01823 1.2e-31 feoA P FeoA domain
DNDPMHBD_01824 6.5e-145 sufC O FeS assembly ATPase SufC
DNDPMHBD_01825 4.6e-241 sufD O FeS assembly protein SufD
DNDPMHBD_01826 5.2e-234 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DNDPMHBD_01827 6.5e-81 nifU C SUF system FeS assembly protein, NifU family
DNDPMHBD_01828 3.6e-271 sufB O assembly protein SufB
DNDPMHBD_01829 2.8e-57 yitW S Iron-sulfur cluster assembly protein
DNDPMHBD_01830 1.6e-160 hipB K Helix-turn-helix
DNDPMHBD_01831 7e-113 nreC K PFAM regulatory protein LuxR
DNDPMHBD_01832 6e-38 S Cytochrome B5
DNDPMHBD_01833 7.1e-155 yitU 3.1.3.104 S hydrolase
DNDPMHBD_01834 1.5e-261 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
DNDPMHBD_01835 4e-148 f42a O Band 7 protein
DNDPMHBD_01836 0.0 lytS 2.7.13.3 T LytS YhcK-type transmembrane receptor domain protein
DNDPMHBD_01837 1.1e-130 lytT K response regulator receiver
DNDPMHBD_01838 1.9e-66 lrgA S LrgA family
DNDPMHBD_01839 2.6e-124 lrgB M LrgB-like family
DNDPMHBD_01840 1.4e-178 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
DNDPMHBD_01841 1.9e-169 scrK 2.7.1.2, 2.7.1.4 GK ROK family
DNDPMHBD_01842 4.8e-185 galR K Periplasmic binding protein-like domain
DNDPMHBD_01843 0.0 rafA 3.2.1.22 G alpha-galactosidase
DNDPMHBD_01844 1.9e-89 S Protein of unknown function (DUF1440)
DNDPMHBD_01845 1.7e-193 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
DNDPMHBD_01846 4.2e-214 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
DNDPMHBD_01847 4.9e-163 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
DNDPMHBD_01848 4.4e-172 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
DNDPMHBD_01849 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
DNDPMHBD_01850 2e-86 ypmB S Protein conserved in bacteria
DNDPMHBD_01851 3.6e-123 dnaD L DnaD domain protein
DNDPMHBD_01852 1.4e-162 EG EamA-like transporter family
DNDPMHBD_01853 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
DNDPMHBD_01854 2.2e-116 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
DNDPMHBD_01855 4.1e-101 ypsA S Belongs to the UPF0398 family
DNDPMHBD_01856 6.6e-44 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
DNDPMHBD_01857 7.7e-85 F Belongs to the NrdI family
DNDPMHBD_01858 3e-223 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
DNDPMHBD_01859 1.8e-71 rnhA 3.1.26.4 L Ribonuclease HI
DNDPMHBD_01860 1.5e-65 esbA S Family of unknown function (DUF5322)
DNDPMHBD_01861 6.3e-73 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
DNDPMHBD_01862 4.5e-174 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
DNDPMHBD_01863 9.9e-205 carA 6.3.5.5 F Belongs to the CarA family
DNDPMHBD_01864 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
DNDPMHBD_01865 0.0 FbpA K Fibronectin-binding protein
DNDPMHBD_01866 5.5e-161 degV S EDD domain protein, DegV family
DNDPMHBD_01867 9.4e-94
DNDPMHBD_01868 3.9e-119 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
DNDPMHBD_01869 6.7e-156 gspA M family 8
DNDPMHBD_01870 1.4e-158 S Alpha beta hydrolase
DNDPMHBD_01871 4.8e-96 K Acetyltransferase (GNAT) domain
DNDPMHBD_01872 2e-38 yphH S Cupin domain
DNDPMHBD_01873 1.9e-72 yeaL S UPF0756 membrane protein
DNDPMHBD_01874 3.3e-245 EGP Major facilitator Superfamily
DNDPMHBD_01875 5e-75 copY K Copper transport repressor CopY TcrY
DNDPMHBD_01876 5.3e-83 L PFAM transposase IS200-family protein
DNDPMHBD_01877 8.4e-183 S Phosphotransferase system, EIIC
DNDPMHBD_01878 2.1e-12 UW LPXTG-motif cell wall anchor domain protein
DNDPMHBD_01882 2.2e-60 XK27_01125 L PFAM IS66 Orf2 family protein
DNDPMHBD_01883 1.7e-10 L Transposase IS66 family
DNDPMHBD_01885 2.9e-310 hsdR 3.1.21.3 L Type I restriction enzyme R protein N terminus (HSDR_N)
DNDPMHBD_01886 7e-254 hsdM 2.1.1.72 V type I restriction-modification system
DNDPMHBD_01887 5.2e-79 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
DNDPMHBD_01888 1.1e-69 K Putative DNA-binding domain
DNDPMHBD_01889 1.1e-130 IQ Dehydrogenase reductase
DNDPMHBD_01890 3.2e-36
DNDPMHBD_01891 7.5e-115 ywnB S NAD(P)H-binding
DNDPMHBD_01892 1.6e-38 S Cytochrome b5-like Heme/Steroid binding domain
DNDPMHBD_01893 8.9e-254 nhaC C Na H antiporter NhaC
DNDPMHBD_01894 2e-183 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DNDPMHBD_01896 2.8e-99 ydeN S Serine hydrolase
DNDPMHBD_01897 2.7e-62 psiE S Phosphate-starvation-inducible E
DNDPMHBD_01898 8.5e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
DNDPMHBD_01900 1.4e-178 S Aldo keto reductase
DNDPMHBD_01901 4.6e-72 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I PAP2 superfamily
DNDPMHBD_01902 0.0 L Helicase C-terminal domain protein
DNDPMHBD_01904 5e-246 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
DNDPMHBD_01905 1.9e-50 S Sugar efflux transporter for intercellular exchange
DNDPMHBD_01906 5.6e-124
DNDPMHBD_01907 6.4e-131 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
DNDPMHBD_01908 2.1e-272 cadA P P-type ATPase
DNDPMHBD_01909 1.6e-30 cadA P P-type ATPase
DNDPMHBD_01910 7.7e-211 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
DNDPMHBD_01912 5.7e-155 1.6.5.2 GM NAD(P)H-binding
DNDPMHBD_01913 4.5e-74 K Transcriptional regulator
DNDPMHBD_01914 7.3e-161 proX M ABC transporter, substrate-binding protein, QAT family
DNDPMHBD_01915 6.3e-109 proWZ P ABC transporter permease
DNDPMHBD_01916 3.2e-141 proV E ABC transporter, ATP-binding protein
DNDPMHBD_01917 1.5e-99 proW P ABC transporter, permease protein
DNDPMHBD_01918 8.2e-78 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
DNDPMHBD_01919 1e-251 clcA P chloride
DNDPMHBD_01920 6.5e-215 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
DNDPMHBD_01921 4.1e-103 metI P ABC transporter permease
DNDPMHBD_01922 1.5e-192 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DNDPMHBD_01923 2.5e-155 metQ1 P Belongs to the nlpA lipoprotein family
DNDPMHBD_01924 8.9e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
DNDPMHBD_01925 6.4e-221 norA EGP Major facilitator Superfamily
DNDPMHBD_01926 3.3e-43 1.3.5.4 S FMN binding
DNDPMHBD_01927 7.1e-118 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DNDPMHBD_01928 2.2e-263 yfnA E amino acid
DNDPMHBD_01929 1.5e-253 gabT 2.6.1.19 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DNDPMHBD_01931 5.3e-204 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
DNDPMHBD_01932 0.0 helD 3.6.4.12 L DNA helicase
DNDPMHBD_01933 6.3e-81 ndk 2.7.4.6 F Belongs to the NDK family
DNDPMHBD_01934 2.3e-181 hpaIM 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
DNDPMHBD_01935 1.7e-190 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
DNDPMHBD_01936 1.2e-166 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
DNDPMHBD_01937 1.4e-226 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
DNDPMHBD_01938 4.1e-178
DNDPMHBD_01939 1.8e-130 cobB K SIR2 family
DNDPMHBD_01941 6.9e-161 yunF F Protein of unknown function DUF72
DNDPMHBD_01942 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DNDPMHBD_01943 4.9e-156 tatD L hydrolase, TatD family
DNDPMHBD_01944 7.2e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DNDPMHBD_01945 6.1e-160 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
DNDPMHBD_01946 6.8e-37 veg S Biofilm formation stimulator VEG
DNDPMHBD_01947 3.1e-161 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
DNDPMHBD_01948 3.1e-167 znuA P Belongs to the bacterial solute-binding protein 9 family
DNDPMHBD_01949 7.7e-123 fhuC P ABC transporter
DNDPMHBD_01950 1.1e-120 znuB U ABC 3 transport family
DNDPMHBD_01951 2.6e-149 purR 2.4.2.7 F pur operon repressor
DNDPMHBD_01952 2.9e-241 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
DNDPMHBD_01953 1.1e-178 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DNDPMHBD_01954 8.9e-48
DNDPMHBD_01955 5.5e-147 yxeH S hydrolase
DNDPMHBD_01956 3.8e-270 ywfO S HD domain protein
DNDPMHBD_01957 5.7e-152 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
DNDPMHBD_01958 1.4e-66 L PFAM transposase IS200-family protein
DNDPMHBD_01959 8.6e-107 yvdD 3.2.2.10 S Belongs to the LOG family
DNDPMHBD_01960 3.5e-166 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
DNDPMHBD_01961 3e-292 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
DNDPMHBD_01962 1.9e-194 S Protein of unknown function (DUF3114)
DNDPMHBD_01963 3.2e-80 yjcF 3.5.4.33, 4.4.1.8 K protein acetylation
DNDPMHBD_01964 1.6e-106 ybhL S Belongs to the BI1 family
DNDPMHBD_01965 2.7e-200 yhjX P Major Facilitator Superfamily
DNDPMHBD_01966 1.8e-21
DNDPMHBD_01967 3e-75 K LytTr DNA-binding domain
DNDPMHBD_01968 1e-67 S Protein of unknown function (DUF3021)
DNDPMHBD_01969 1.8e-154 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
DNDPMHBD_01970 4.8e-84 ogt 2.1.1.63 L Methyltransferase
DNDPMHBD_01971 1.4e-124 pnb C nitroreductase
DNDPMHBD_01972 4.3e-92
DNDPMHBD_01973 1.1e-81 yvbK 3.1.3.25 K GNAT family
DNDPMHBD_01974 1e-248 gor 1.8.1.7 C pyridine nucleotide-disulfide oxidoreductase
DNDPMHBD_01975 2.6e-206 amtB P ammonium transporter
DNDPMHBD_01976 2.4e-86 3.6.4.12 S PD-(D/E)XK nuclease family transposase
DNDPMHBD_01977 2.3e-69 S PFAM Archaeal ATPase
DNDPMHBD_01978 6.2e-49 S PFAM Archaeal ATPase
DNDPMHBD_01979 1.5e-303 XK27_08510 L Type III restriction protein res subunit
DNDPMHBD_01980 5.7e-52
DNDPMHBD_01981 1.8e-153 cylA V ABC transporter
DNDPMHBD_01982 3.7e-146 cylB V ABC-2 type transporter
DNDPMHBD_01983 1.4e-75 K LytTr DNA-binding domain
DNDPMHBD_01984 6.3e-61 S Protein of unknown function (DUF3021)
DNDPMHBD_01986 2.5e-183 L Plasmid pRiA4b ORF-3-like protein
DNDPMHBD_01987 1.4e-110 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
DNDPMHBD_01988 7e-98 dps P Belongs to the Dps family
DNDPMHBD_01989 2.5e-36 copZ P PFAM Heavy metal transport detoxification protein
DNDPMHBD_01990 6.5e-297 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
DNDPMHBD_01991 2.1e-58 K transcriptional regulator
DNDPMHBD_01992 5.1e-41 K transcriptional regulator
DNDPMHBD_01993 1.5e-258 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
DNDPMHBD_01994 1.7e-87 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DNDPMHBD_01995 3.1e-259 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DNDPMHBD_01996 1.1e-186 yegS 2.7.1.107 G Lipid kinase
DNDPMHBD_01997 1.8e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DNDPMHBD_01998 5.9e-277 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
DNDPMHBD_01999 3.5e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DNDPMHBD_02000 1.2e-202 camS S sex pheromone
DNDPMHBD_02001 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
DNDPMHBD_02002 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
DNDPMHBD_02003 2.7e-213 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
DNDPMHBD_02004 1.7e-99 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
DNDPMHBD_02005 3e-113 acmC 3.2.1.96 NU mannosyl-glycoprotein
DNDPMHBD_02006 2.1e-140 IQ reductase
DNDPMHBD_02007 5.6e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
DNDPMHBD_02008 4.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
DNDPMHBD_02009 6.5e-142 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
DNDPMHBD_02010 3.4e-141 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DNDPMHBD_02011 6e-152 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DNDPMHBD_02012 1.1e-144 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DNDPMHBD_02013 1.1e-62 rplQ J Ribosomal protein L17
DNDPMHBD_02014 2.8e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DNDPMHBD_02015 2.3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
DNDPMHBD_02016 4.7e-58 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
DNDPMHBD_02017 1.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
DNDPMHBD_02018 1.2e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
DNDPMHBD_02019 8.1e-125 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
DNDPMHBD_02020 8.8e-240 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
DNDPMHBD_02021 8.9e-64 rplO J Binds to the 23S rRNA
DNDPMHBD_02022 2.9e-24 rpmD J Ribosomal protein L30
DNDPMHBD_02023 2.2e-85 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
DNDPMHBD_02024 6.6e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
DNDPMHBD_02025 4.6e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DNDPMHBD_02026 1.3e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
DNDPMHBD_02027 4e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DNDPMHBD_02028 1.4e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
DNDPMHBD_02029 2.6e-49 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
DNDPMHBD_02030 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DNDPMHBD_02031 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
DNDPMHBD_02032 8.4e-28 rpmC J Belongs to the universal ribosomal protein uL29 family
DNDPMHBD_02033 3.5e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DNDPMHBD_02034 6.1e-112 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
DNDPMHBD_02035 2.8e-52 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
DNDPMHBD_02036 1.4e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DNDPMHBD_02037 5.4e-150 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
DNDPMHBD_02038 2.2e-45 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
DNDPMHBD_02039 5.5e-107 rplD J Forms part of the polypeptide exit tunnel
DNDPMHBD_02040 1.5e-118 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
DNDPMHBD_02041 3.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
DNDPMHBD_02042 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DNDPMHBD_02043 1.2e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
DNDPMHBD_02044 3.9e-72 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
DNDPMHBD_02045 2.7e-120 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
DNDPMHBD_02046 2.7e-200 ykiI
DNDPMHBD_02047 1.4e-124 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
DNDPMHBD_02048 2.4e-181 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
DNDPMHBD_02049 3.3e-258 lysC 2.7.2.4 E Belongs to the aspartokinase family
DNDPMHBD_02050 1.9e-250 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
DNDPMHBD_02051 6.7e-77 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
DNDPMHBD_02052 6.5e-223 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
DNDPMHBD_02053 7.7e-174 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DNDPMHBD_02054 1e-139 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
DNDPMHBD_02055 5.9e-219 patA 2.6.1.1 E Aminotransferase
DNDPMHBD_02056 3e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DNDPMHBD_02057 3.6e-82 KT Putative sugar diacid recognition
DNDPMHBD_02058 5.9e-220 EG GntP family permease
DNDPMHBD_02059 2.8e-205 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
DNDPMHBD_02060 2.2e-57
DNDPMHBD_02062 7.3e-139 mltD CBM50 M NlpC P60 family protein
DNDPMHBD_02063 1.3e-28
DNDPMHBD_02064 3.8e-184 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic
DNDPMHBD_02065 9.8e-32 ykzG S Belongs to the UPF0356 family
DNDPMHBD_02066 9.7e-80
DNDPMHBD_02067 6.2e-102 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
DNDPMHBD_02068 8.8e-209 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
DNDPMHBD_02069 8.1e-182 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
DNDPMHBD_02070 9.3e-229 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
DNDPMHBD_02071 5.4e-275 lpdA 1.8.1.4 C Dehydrogenase
DNDPMHBD_02072 5.1e-47 yktA S Belongs to the UPF0223 family
DNDPMHBD_02073 1.4e-136 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
DNDPMHBD_02074 0.0 typA T GTP-binding protein TypA
DNDPMHBD_02075 1.8e-223 ftsW D Belongs to the SEDS family
DNDPMHBD_02076 3.9e-44 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
DNDPMHBD_02077 8.5e-99 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
DNDPMHBD_02078 5.1e-90 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
DNDPMHBD_02079 4.8e-196 ylbL T Belongs to the peptidase S16 family
DNDPMHBD_02080 8.4e-79 comEA L Competence protein ComEA
DNDPMHBD_02081 3.1e-89 comEB 3.5.4.12 F ComE operon protein 2
DNDPMHBD_02082 0.0 comEC S Competence protein ComEC
DNDPMHBD_02083 6.2e-148 holA 2.7.7.7 L DNA polymerase III delta subunit
DNDPMHBD_02084 5.1e-35 rpsT J Binds directly to 16S ribosomal RNA
DNDPMHBD_02085 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
DNDPMHBD_02086 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DNDPMHBD_02087 7.8e-163 S Tetratricopeptide repeat
DNDPMHBD_02088 3.8e-226 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DNDPMHBD_02089 2.8e-238 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
DNDPMHBD_02090 1.8e-234 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
DNDPMHBD_02091 3.6e-108 engB D Necessary for normal cell division and for the maintenance of normal septation
DNDPMHBD_02092 6.1e-60 MA20_27270 S mazG nucleotide pyrophosphohydrolase
DNDPMHBD_02093 7.6e-09
DNDPMHBD_02094 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
DNDPMHBD_02095 2.3e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DNDPMHBD_02096 1.7e-176 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
DNDPMHBD_02097 1.5e-155 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
DNDPMHBD_02098 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
DNDPMHBD_02099 9.2e-92 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DNDPMHBD_02100 4.8e-87
DNDPMHBD_02101 1.3e-93 L Belongs to the 'phage' integrase family
DNDPMHBD_02102 4.7e-10 E Zn peptidase
DNDPMHBD_02103 4.4e-18 XK27_10050 K Peptidase S24-like
DNDPMHBD_02105 9e-11 S Domain of unknown function (DUF771)
DNDPMHBD_02107 3.8e-20 L Psort location Cytoplasmic, score
DNDPMHBD_02110 1e-12

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)