ORF_ID e_value Gene_name EC_number CAZy COGs Description
GMDDIDLE_00001 5.9e-47 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
GMDDIDLE_00002 6.5e-44 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
GMDDIDLE_00003 1.5e-68 L RelB antitoxin
GMDDIDLE_00005 3.2e-132 cobQ S glutamine amidotransferase
GMDDIDLE_00006 1.6e-82 M NlpC/P60 family
GMDDIDLE_00009 1.9e-35
GMDDIDLE_00010 1e-165 EG EamA-like transporter family
GMDDIDLE_00011 3.1e-102 L PFAM Integrase catalytic region
GMDDIDLE_00012 2.6e-41 L Helix-turn-helix domain
GMDDIDLE_00013 7e-167 EG EamA-like transporter family
GMDDIDLE_00014 5.3e-116 yicL EG EamA-like transporter family
GMDDIDLE_00015 5.7e-107
GMDDIDLE_00016 5.4e-110
GMDDIDLE_00017 5.8e-186 XK27_05540 S DUF218 domain
GMDDIDLE_00018 2.3e-262 yheS_2 S ATPases associated with a variety of cellular activities
GMDDIDLE_00019 7.7e-88
GMDDIDLE_00020 3.9e-57
GMDDIDLE_00021 1.2e-28 S Protein conserved in bacteria
GMDDIDLE_00022 8.1e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
GMDDIDLE_00023 8.2e-230 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GMDDIDLE_00024 7e-189 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GMDDIDLE_00027 3.9e-206 4.2.1.126 S Bacterial protein of unknown function (DUF871)
GMDDIDLE_00028 4.9e-190 asnA 6.3.1.1 F aspartate--ammonia ligase
GMDDIDLE_00029 8.5e-67 L An automated process has identified a potential problem with this gene model
GMDDIDLE_00030 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
GMDDIDLE_00031 0.0 mtlR K Mga helix-turn-helix domain
GMDDIDLE_00032 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
GMDDIDLE_00033 2.1e-79 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GMDDIDLE_00034 3.7e-221 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
GMDDIDLE_00035 1.2e-132 4.1.1.44 S Carboxymuconolactone decarboxylase family
GMDDIDLE_00036 1.6e-32
GMDDIDLE_00037 2.6e-68 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
GMDDIDLE_00038 6.7e-156 K Helix-turn-helix XRE-family like proteins
GMDDIDLE_00040 3.3e-297 V ABC transporter transmembrane region
GMDDIDLE_00041 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
GMDDIDLE_00042 0.0 S TerB-C domain
GMDDIDLE_00043 5.4e-253 P P-loop Domain of unknown function (DUF2791)
GMDDIDLE_00044 0.0 lhr L DEAD DEAH box helicase
GMDDIDLE_00045 1.9e-59
GMDDIDLE_00046 4.1e-141 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
GMDDIDLE_00048 1e-61 psiE S Phosphate-starvation-inducible E
GMDDIDLE_00049 3.8e-113 yncA 2.3.1.79 S Maltose acetyltransferase
GMDDIDLE_00050 1.5e-70 S Iron-sulphur cluster biosynthesis
GMDDIDLE_00052 2.3e-30
GMDDIDLE_00053 3.4e-171 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
GMDDIDLE_00054 6.2e-12
GMDDIDLE_00055 1.1e-115 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GMDDIDLE_00056 1.1e-28 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GMDDIDLE_00057 6.8e-79 M LysM domain protein
GMDDIDLE_00058 1.5e-160 D nuclear chromosome segregation
GMDDIDLE_00059 1.2e-105 G Phosphoglycerate mutase family
GMDDIDLE_00060 3.7e-88 G Histidine phosphatase superfamily (branch 1)
GMDDIDLE_00061 5.4e-113 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
GMDDIDLE_00062 1.9e-113 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
GMDDIDLE_00064 1.4e-220 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
GMDDIDLE_00065 5e-187 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
GMDDIDLE_00066 8.7e-122 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
GMDDIDLE_00067 4.4e-144 K SIS domain
GMDDIDLE_00068 2.3e-228 slpX S SLAP domain
GMDDIDLE_00069 1.3e-22 3.6.4.12 S transposase or invertase
GMDDIDLE_00070 7.7e-12
GMDDIDLE_00071 3.2e-240 npr 1.11.1.1 C NADH oxidase
GMDDIDLE_00074 5.1e-60
GMDDIDLE_00076 1.1e-98 S D5 N terminal like
GMDDIDLE_00077 2.2e-48
GMDDIDLE_00079 1.2e-21
GMDDIDLE_00080 1.1e-11 S Helix-turn-helix domain
GMDDIDLE_00081 9.1e-29 K Transcriptional
GMDDIDLE_00082 4.7e-221 sip L Belongs to the 'phage' integrase family
GMDDIDLE_00083 3e-298 oppA2 E ABC transporter, substratebinding protein
GMDDIDLE_00084 2.5e-179
GMDDIDLE_00085 4.6e-123 gntR1 K UTRA
GMDDIDLE_00086 5.1e-71 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
GMDDIDLE_00087 4.3e-135 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
GMDDIDLE_00088 9e-206 csaB M Glycosyl transferases group 1
GMDDIDLE_00089 2.7e-285 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GMDDIDLE_00090 4e-153 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
GMDDIDLE_00091 0.0 pacL 3.6.3.8 P P-type ATPase
GMDDIDLE_00092 6e-224 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
GMDDIDLE_00093 6.4e-260 epsU S Polysaccharide biosynthesis protein
GMDDIDLE_00094 9.1e-135 M Glycosyltransferase sugar-binding region containing DXD motif
GMDDIDLE_00095 1.8e-83 ydcK S Belongs to the SprT family
GMDDIDLE_00097 2.5e-86 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
GMDDIDLE_00098 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
GMDDIDLE_00099 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GMDDIDLE_00100 5.4e-201 camS S sex pheromone
GMDDIDLE_00101 1.5e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GMDDIDLE_00102 5.2e-270 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
GMDDIDLE_00103 4.1e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GMDDIDLE_00104 7.2e-172 yegS 2.7.1.107 G Lipid kinase
GMDDIDLE_00105 4.3e-108 ybhL S Belongs to the BI1 family
GMDDIDLE_00106 2.6e-57
GMDDIDLE_00107 3.1e-100 VPA0052 I transferase activity, transferring acyl groups other than amino-acyl groups
GMDDIDLE_00108 2.8e-244 nhaC C Na H antiporter NhaC
GMDDIDLE_00109 6.3e-201 pbpX V Beta-lactamase
GMDDIDLE_00110 5.8e-255 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GMDDIDLE_00111 1.1e-94 MA20_25245 K Acetyltransferase (GNAT) domain
GMDDIDLE_00116 1.7e-260 emrY EGP Major facilitator Superfamily
GMDDIDLE_00117 2e-91 yxdD K Bacterial regulatory proteins, tetR family
GMDDIDLE_00118 1.1e-32 4.2.1.53 S Myosin-crossreactive antigen
GMDDIDLE_00119 2.5e-242 L DDE superfamily endonuclease
GMDDIDLE_00120 3.6e-77 vatD S acetyltransferase'
GMDDIDLE_00121 4.4e-85 dps P Belongs to the Dps family
GMDDIDLE_00122 1.3e-31 npr 1.11.1.1 C NADH oxidase
GMDDIDLE_00123 0.0 pepO 3.4.24.71 O Peptidase family M13
GMDDIDLE_00124 0.0 mdlB V ABC transporter
GMDDIDLE_00125 0.0 mdlA V ABC transporter
GMDDIDLE_00126 3.3e-30 yneF S Uncharacterised protein family (UPF0154)
GMDDIDLE_00127 1.4e-38 ynzC S UPF0291 protein
GMDDIDLE_00128 2e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GMDDIDLE_00129 3.7e-145 E GDSL-like Lipase/Acylhydrolase family
GMDDIDLE_00130 3.2e-121 ung2 3.2.2.27 L Uracil-DNA glycosylase
GMDDIDLE_00131 3.8e-215 S SLAP domain
GMDDIDLE_00132 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
GMDDIDLE_00133 6.1e-134 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
GMDDIDLE_00134 2.2e-93 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GMDDIDLE_00135 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
GMDDIDLE_00136 5.8e-229 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GMDDIDLE_00137 4.6e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
GMDDIDLE_00138 4.9e-260 yfnA E amino acid
GMDDIDLE_00139 0.0 V FtsX-like permease family
GMDDIDLE_00140 2.4e-133 cysA V ABC transporter, ATP-binding protein
GMDDIDLE_00141 4.7e-287 pipD E Dipeptidase
GMDDIDLE_00142 8.6e-163 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
GMDDIDLE_00143 0.0 smc D Required for chromosome condensation and partitioning
GMDDIDLE_00144 5.5e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
GMDDIDLE_00145 1.4e-309 oppA E ABC transporter substrate-binding protein
GMDDIDLE_00146 4.5e-269 oppA E ABC transporter substrate-binding protein
GMDDIDLE_00147 1.4e-11 oppA E ABC transporter substrate-binding protein
GMDDIDLE_00148 6.2e-131 oppC P Binding-protein-dependent transport system inner membrane component
GMDDIDLE_00149 7.5e-172 oppB P ABC transporter permease
GMDDIDLE_00150 8.8e-168 oppF P Belongs to the ABC transporter superfamily
GMDDIDLE_00151 1.1e-192 oppD P Belongs to the ABC transporter superfamily
GMDDIDLE_00152 1.8e-34 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
GMDDIDLE_00153 1.6e-180 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
GMDDIDLE_00154 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
GMDDIDLE_00155 2e-305 yloV S DAK2 domain fusion protein YloV
GMDDIDLE_00156 4e-57 asp S Asp23 family, cell envelope-related function
GMDDIDLE_00157 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
GMDDIDLE_00158 4.1e-124 thiN 2.7.6.2 H thiamine pyrophosphokinase
GMDDIDLE_00159 1.7e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
GMDDIDLE_00160 6.3e-165 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
GMDDIDLE_00161 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
GMDDIDLE_00162 1.3e-139 stp 3.1.3.16 T phosphatase
GMDDIDLE_00163 4.7e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
GMDDIDLE_00164 1.3e-171 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GMDDIDLE_00165 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GMDDIDLE_00166 1.1e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
GMDDIDLE_00167 2.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
GMDDIDLE_00168 1.1e-77 6.3.3.2 S ASCH
GMDDIDLE_00169 4.8e-307 recN L May be involved in recombinational repair of damaged DNA
GMDDIDLE_00170 2.3e-153 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
GMDDIDLE_00171 2.4e-161 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GMDDIDLE_00172 3.7e-35 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GMDDIDLE_00173 2.2e-193 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GMDDIDLE_00174 6.7e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GMDDIDLE_00175 2.1e-64 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GMDDIDLE_00176 3.4e-71 yqhY S Asp23 family, cell envelope-related function
GMDDIDLE_00177 4.9e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GMDDIDLE_00178 6.6e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
GMDDIDLE_00179 7.8e-48 rpmA J Belongs to the bacterial ribosomal protein bL27 family
GMDDIDLE_00180 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
GMDDIDLE_00181 1.4e-150 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GMDDIDLE_00182 6.6e-254 S Uncharacterized protein conserved in bacteria (DUF2325)
GMDDIDLE_00185 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
GMDDIDLE_00186 1e-299 S Predicted membrane protein (DUF2207)
GMDDIDLE_00187 2.1e-160 cinI S Serine hydrolase (FSH1)
GMDDIDLE_00188 5.4e-207 M Glycosyl hydrolases family 25
GMDDIDLE_00190 2.9e-178 I Carboxylesterase family
GMDDIDLE_00191 1.5e-64 arsC 1.20.4.1 P Belongs to the ArsC family
GMDDIDLE_00192 5.2e-279 V ABC-type multidrug transport system, ATPase and permease components
GMDDIDLE_00193 5.4e-292 V ABC-type multidrug transport system, ATPase and permease components
GMDDIDLE_00194 2.5e-152 S haloacid dehalogenase-like hydrolase
GMDDIDLE_00195 2.6e-52
GMDDIDLE_00196 1.9e-37
GMDDIDLE_00197 1.2e-42 S Alpha beta hydrolase
GMDDIDLE_00198 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
GMDDIDLE_00199 2.8e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
GMDDIDLE_00200 7.1e-46
GMDDIDLE_00201 1.8e-148 glcU U sugar transport
GMDDIDLE_00202 2.2e-250 lctP C L-lactate permease
GMDDIDLE_00203 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
GMDDIDLE_00204 2.4e-211 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
GMDDIDLE_00205 4e-245 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
GMDDIDLE_00206 1.6e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
GMDDIDLE_00207 1.8e-93 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GMDDIDLE_00208 2e-166 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
GMDDIDLE_00209 4.6e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
GMDDIDLE_00210 1.1e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GMDDIDLE_00211 6.9e-20 clcA P chloride
GMDDIDLE_00212 3.9e-38 clcA P chloride
GMDDIDLE_00213 2.1e-285 lsa S ABC transporter
GMDDIDLE_00214 3.7e-45
GMDDIDLE_00215 2.7e-117 sdaAB 4.3.1.17 E Serine dehydratase beta chain
GMDDIDLE_00216 3.6e-54
GMDDIDLE_00217 3e-26
GMDDIDLE_00218 4.4e-69 5.4.2.11 G Phosphoglycerate mutase family
GMDDIDLE_00221 6.3e-154 M Belongs to the glycosyl hydrolase 28 family
GMDDIDLE_00222 1.7e-78 K Acetyltransferase (GNAT) domain
GMDDIDLE_00223 9.7e-106 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
GMDDIDLE_00224 5.6e-118 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GMDDIDLE_00225 3.8e-134 S membrane transporter protein
GMDDIDLE_00226 5.8e-126 gpmB G Belongs to the phosphoglycerate mutase family
GMDDIDLE_00227 5.1e-162 czcD P cation diffusion facilitator family transporter
GMDDIDLE_00228 1.4e-23
GMDDIDLE_00229 1.2e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GMDDIDLE_00230 1.1e-183 S AAA domain
GMDDIDLE_00231 2.3e-50
GMDDIDLE_00232 6e-260 pepC 3.4.22.40 E Peptidase C1-like family
GMDDIDLE_00233 6.4e-53
GMDDIDLE_00234 1.8e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
GMDDIDLE_00235 2.7e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GMDDIDLE_00236 1.9e-291 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GMDDIDLE_00237 2e-277 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
GMDDIDLE_00238 1.6e-76 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
GMDDIDLE_00239 1.7e-139 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GMDDIDLE_00240 4.2e-95 sigH K Belongs to the sigma-70 factor family
GMDDIDLE_00241 1.7e-34
GMDDIDLE_00242 4.5e-288 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
GMDDIDLE_00243 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GMDDIDLE_00244 3.6e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
GMDDIDLE_00245 1.1e-101 nusG K Participates in transcription elongation, termination and antitermination
GMDDIDLE_00246 1.2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GMDDIDLE_00247 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
GMDDIDLE_00248 7.3e-158 pstS P Phosphate
GMDDIDLE_00249 3.9e-163 pstC P probably responsible for the translocation of the substrate across the membrane
GMDDIDLE_00250 1.2e-155 pstA P Phosphate transport system permease protein PstA
GMDDIDLE_00251 5e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GMDDIDLE_00252 1.7e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GMDDIDLE_00253 2.2e-117 phoU P Plays a role in the regulation of phosphate uptake
GMDDIDLE_00254 7.9e-67 rpsI J Belongs to the universal ribosomal protein uS9 family
GMDDIDLE_00255 5.9e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GMDDIDLE_00256 7.8e-151 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
GMDDIDLE_00257 6.5e-137 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GMDDIDLE_00258 5.4e-158 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GMDDIDLE_00259 3.7e-154 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GMDDIDLE_00260 1.4e-60 rplQ J Ribosomal protein L17
GMDDIDLE_00261 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GMDDIDLE_00262 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GMDDIDLE_00263 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GMDDIDLE_00264 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
GMDDIDLE_00265 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GMDDIDLE_00266 3.5e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
GMDDIDLE_00267 1.1e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
GMDDIDLE_00268 2.6e-71 rplO J Binds to the 23S rRNA
GMDDIDLE_00269 2.3e-24 rpmD J Ribosomal protein L30
GMDDIDLE_00270 4.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GMDDIDLE_00271 3.6e-55 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GMDDIDLE_00272 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GMDDIDLE_00273 3.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GMDDIDLE_00274 6.8e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GMDDIDLE_00275 5.5e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GMDDIDLE_00276 3.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GMDDIDLE_00277 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GMDDIDLE_00278 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GMDDIDLE_00279 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
GMDDIDLE_00280 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GMDDIDLE_00281 2.7e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GMDDIDLE_00282 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GMDDIDLE_00283 1.1e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GMDDIDLE_00284 7.3e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GMDDIDLE_00285 3.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
GMDDIDLE_00286 9.6e-104 rplD J Forms part of the polypeptide exit tunnel
GMDDIDLE_00287 9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GMDDIDLE_00288 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
GMDDIDLE_00289 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GMDDIDLE_00290 2.7e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
GMDDIDLE_00291 4.6e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GMDDIDLE_00292 3.6e-120 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
GMDDIDLE_00293 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GMDDIDLE_00294 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GMDDIDLE_00295 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GMDDIDLE_00296 3.8e-81 yebR 1.8.4.14 T GAF domain-containing protein
GMDDIDLE_00298 1.6e-08
GMDDIDLE_00299 1.6e-08
GMDDIDLE_00300 1.6e-08
GMDDIDLE_00302 5.8e-299 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
GMDDIDLE_00303 2.3e-195 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GMDDIDLE_00304 3.3e-166 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
GMDDIDLE_00305 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GMDDIDLE_00306 1.5e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
GMDDIDLE_00307 6.3e-63 yabR J S1 RNA binding domain
GMDDIDLE_00308 6.8e-60 divIC D Septum formation initiator
GMDDIDLE_00309 1.6e-33 yabO J S4 domain protein
GMDDIDLE_00310 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GMDDIDLE_00311 5.1e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
GMDDIDLE_00312 1.5e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
GMDDIDLE_00313 3.4e-129 S (CBS) domain
GMDDIDLE_00314 1.7e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GMDDIDLE_00315 1.7e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
GMDDIDLE_00316 4.8e-250 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
GMDDIDLE_00317 1.3e-262 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
GMDDIDLE_00318 2.5e-39 rpmE2 J Ribosomal protein L31
GMDDIDLE_00319 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
GMDDIDLE_00320 3.2e-155 S Sucrose-6F-phosphate phosphohydrolase
GMDDIDLE_00321 4.1e-83 ybeC E amino acid
GMDDIDLE_00322 2.2e-199 ybeC E amino acid
GMDDIDLE_00323 1.7e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
GMDDIDLE_00324 4.7e-42
GMDDIDLE_00325 2.8e-52
GMDDIDLE_00326 4.7e-185 5.3.3.2 C FMN-dependent dehydrogenase
GMDDIDLE_00327 2.2e-143 yfeO P Voltage gated chloride channel
GMDDIDLE_00328 9.4e-237 mepA V MATE efflux family protein
GMDDIDLE_00329 4.8e-73 yjaB 2.3.1.181 K Acetyltransferase (GNAT) domain
GMDDIDLE_00330 7.1e-69 S Putative adhesin
GMDDIDLE_00331 6.2e-100 yihX 3.1.3.10, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GMDDIDLE_00333 9.8e-15 1.3.5.4 C succinate dehydrogenase
GMDDIDLE_00334 1.1e-14 K Acetyltransferase (GNAT) domain
GMDDIDLE_00335 1.2e-85 dps P Belongs to the Dps family
GMDDIDLE_00336 1.5e-178 MA20_14895 S Conserved hypothetical protein 698
GMDDIDLE_00338 1.3e-190 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GMDDIDLE_00339 1.4e-101 3.6.1.27 I Acid phosphatase homologues
GMDDIDLE_00340 1.3e-148 yitS S Uncharacterised protein, DegV family COG1307
GMDDIDLE_00341 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GMDDIDLE_00342 2.7e-88 S Domain of unknown function (DUF4767)
GMDDIDLE_00343 4.5e-64 C nitroreductase
GMDDIDLE_00344 6.4e-09 C nitroreductase
GMDDIDLE_00345 2.5e-158 ypbG 2.7.1.2 GK ROK family
GMDDIDLE_00346 2e-235 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GMDDIDLE_00347 1.5e-31 lacE G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GMDDIDLE_00348 1.8e-226 lacE G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GMDDIDLE_00349 1e-40
GMDDIDLE_00350 4e-133 gmuR K UTRA
GMDDIDLE_00351 1.3e-303 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GMDDIDLE_00352 3.2e-71 S Domain of unknown function (DUF3284)
GMDDIDLE_00353 1.5e-59 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
GMDDIDLE_00354 1.6e-55 celA1 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
GMDDIDLE_00355 3.7e-128 K UTRA domain
GMDDIDLE_00356 1.5e-293 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GMDDIDLE_00357 2.2e-90 alkD L DNA alkylation repair enzyme
GMDDIDLE_00358 1.3e-176 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
GMDDIDLE_00359 2.3e-82
GMDDIDLE_00360 3.6e-39 C FMN_bind
GMDDIDLE_00361 5.4e-300 I Protein of unknown function (DUF2974)
GMDDIDLE_00362 3.8e-196 pbpX1 V Beta-lactamase
GMDDIDLE_00363 1.6e-199 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GMDDIDLE_00364 3.8e-218 aspC 2.6.1.1 E Aminotransferase
GMDDIDLE_00365 7e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
GMDDIDLE_00366 2.8e-176 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GMDDIDLE_00367 3.1e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
GMDDIDLE_00368 2.8e-75 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
GMDDIDLE_00369 4.4e-247 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
GMDDIDLE_00370 2.9e-96 L Transposase
GMDDIDLE_00371 1.1e-55 L Transposase
GMDDIDLE_00372 1.1e-258 lysC 2.7.2.4 E Belongs to the aspartokinase family
GMDDIDLE_00373 2.3e-192 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
GMDDIDLE_00374 6.2e-127 yjeM E Amino Acid
GMDDIDLE_00375 3.4e-14
GMDDIDLE_00376 3.7e-105 engB D Necessary for normal cell division and for the maintenance of normal septation
GMDDIDLE_00377 2.9e-232 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GMDDIDLE_00378 4e-216 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
GMDDIDLE_00379 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GMDDIDLE_00380 8.3e-151
GMDDIDLE_00381 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GMDDIDLE_00382 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GMDDIDLE_00383 6.7e-35 rpsT J Binds directly to 16S ribosomal RNA
GMDDIDLE_00384 2.6e-175 holA 2.7.7.7 L DNA polymerase III delta subunit
GMDDIDLE_00385 0.0 comEC S Competence protein ComEC
GMDDIDLE_00386 6.5e-77 comEA L Competence protein ComEA
GMDDIDLE_00387 9.6e-189 ylbL T Belongs to the peptidase S16 family
GMDDIDLE_00388 3.6e-82 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GMDDIDLE_00389 1.7e-96 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
GMDDIDLE_00390 5.1e-54 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
GMDDIDLE_00391 5.4e-212 ftsW D Belongs to the SEDS family
GMDDIDLE_00392 0.0 typA T GTP-binding protein TypA
GMDDIDLE_00393 4e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GMDDIDLE_00394 3.2e-33 ykzG S Belongs to the UPF0356 family
GMDDIDLE_00395 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GMDDIDLE_00396 4.6e-182 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
GMDDIDLE_00397 5.4e-295 L Nuclease-related domain
GMDDIDLE_00398 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
GMDDIDLE_00399 8.3e-106 S Repeat protein
GMDDIDLE_00400 3.9e-127 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
GMDDIDLE_00401 4.6e-221 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
GMDDIDLE_00402 2.2e-57 XK27_04120 S Putative amino acid metabolism
GMDDIDLE_00403 1.9e-209 iscS 2.8.1.7 E Aminotransferase class V
GMDDIDLE_00404 2.2e-112 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GMDDIDLE_00405 2.1e-38
GMDDIDLE_00406 9.8e-103 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
GMDDIDLE_00407 3.6e-31 cspA K 'Cold-shock' DNA-binding domain
GMDDIDLE_00408 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GMDDIDLE_00409 2.8e-74 gpsB D DivIVA domain protein
GMDDIDLE_00410 7.4e-149 ylmH S S4 domain protein
GMDDIDLE_00411 1.7e-45 yggT S YGGT family
GMDDIDLE_00412 7.3e-74 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
GMDDIDLE_00413 1.8e-219 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GMDDIDLE_00414 2.3e-243 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
GMDDIDLE_00415 1.2e-152 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
GMDDIDLE_00416 4.4e-208 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GMDDIDLE_00417 7.3e-261 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GMDDIDLE_00418 1.5e-175 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GMDDIDLE_00419 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
GMDDIDLE_00420 4.1e-54 ftsL D Cell division protein FtsL
GMDDIDLE_00421 1.3e-176 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
GMDDIDLE_00422 6.3e-78 mraZ K Belongs to the MraZ family
GMDDIDLE_00423 6.4e-54 S Protein of unknown function (DUF3397)
GMDDIDLE_00425 2.7e-94 mreD
GMDDIDLE_00426 8.8e-148 mreC M Involved in formation and maintenance of cell shape
GMDDIDLE_00427 1.8e-176 mreB D cell shape determining protein MreB
GMDDIDLE_00428 2.3e-108 radC L DNA repair protein
GMDDIDLE_00429 2e-126 S Haloacid dehalogenase-like hydrolase
GMDDIDLE_00430 1.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
GMDDIDLE_00431 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
GMDDIDLE_00432 1.3e-51
GMDDIDLE_00433 1.1e-132 S AAA domain, putative AbiEii toxin, Type IV TA system
GMDDIDLE_00434 0.0 3.6.3.8 P P-type ATPase
GMDDIDLE_00436 2.9e-44
GMDDIDLE_00437 3.4e-94 S Protein of unknown function (DUF3990)
GMDDIDLE_00438 1.4e-170 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
GMDDIDLE_00439 2.1e-65 2.4.1.83 GT2 S GtrA-like protein
GMDDIDLE_00440 9.1e-28 3.6.4.12 S PD-(D/E)XK nuclease family transposase
GMDDIDLE_00441 8.3e-120 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GMDDIDLE_00442 4.7e-154
GMDDIDLE_00443 8.1e-135 K Helix-turn-helix XRE-family like proteins
GMDDIDLE_00444 2.1e-111
GMDDIDLE_00448 1.3e-182 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
GMDDIDLE_00449 1.4e-115 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
GMDDIDLE_00450 2.9e-162 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
GMDDIDLE_00451 1.4e-203 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
GMDDIDLE_00452 4.4e-190 KQ helix_turn_helix, mercury resistance
GMDDIDLE_00453 1.4e-13
GMDDIDLE_00454 3.7e-70
GMDDIDLE_00455 4.2e-36 L PFAM IS66 Orf2 family protein
GMDDIDLE_00456 1.1e-125 L Transposase IS66 family
GMDDIDLE_00457 4.3e-63 ala 1.4.1.1 E Catalyzes the NAD( )-dependent oxidative deamination of L-alanine to pyruvate, and the reverse reaction, the reductive amination of pyruvate
GMDDIDLE_00458 1.7e-260 E Amino acid permease
GMDDIDLE_00459 1.4e-261 2.7.1.89 M Nucleotidyl transferase
GMDDIDLE_00460 1e-138 M Nucleotidyl transferase
GMDDIDLE_00461 7.4e-84 M LicD family
GMDDIDLE_00462 3.5e-181 epsIIL S Membrane protein involved in the export of O-antigen and teichoic acid
GMDDIDLE_00463 7e-206 glf 5.4.99.9 M UDP-galactopyranose mutase
GMDDIDLE_00464 6.3e-89 M Glycosyl transferase family 2
GMDDIDLE_00465 3.7e-28 epsJ1 M Glycosyltransferase like family 2
GMDDIDLE_00466 9.3e-27 S EpsG family
GMDDIDLE_00467 1.7e-87 M Glycosyl transferases group 1
GMDDIDLE_00468 1.3e-92 lsgF M Glycosyl transferase family 2
GMDDIDLE_00469 1.4e-113 rfbP M Bacterial sugar transferase
GMDDIDLE_00470 8.2e-145 ywqE 3.1.3.48 GM PHP domain protein
GMDDIDLE_00471 6e-119 ywqD 2.7.10.1 D Capsular exopolysaccharide family
GMDDIDLE_00472 2.9e-146 epsB M biosynthesis protein
GMDDIDLE_00473 4.2e-176 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GMDDIDLE_00474 4.9e-41 relB L RelB antitoxin
GMDDIDLE_00476 3.4e-220 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GMDDIDLE_00477 2.3e-174 S Cysteine-rich secretory protein family
GMDDIDLE_00479 5.8e-118 M NlpC/P60 family
GMDDIDLE_00480 1.4e-136 M NlpC P60 family protein
GMDDIDLE_00481 1.1e-85 M NlpC/P60 family
GMDDIDLE_00482 3.6e-94 gmk2 2.7.4.8 F Guanylate kinase homologues.
GMDDIDLE_00483 9.3e-44
GMDDIDLE_00484 5.5e-278 S O-antigen ligase like membrane protein
GMDDIDLE_00485 3.3e-112
GMDDIDLE_00486 1.9e-77 nrdI F NrdI Flavodoxin like
GMDDIDLE_00487 7.5e-177 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GMDDIDLE_00488 8.6e-69
GMDDIDLE_00489 2.2e-110 yvpB S Peptidase_C39 like family
GMDDIDLE_00490 2.5e-83 S Threonine/Serine exporter, ThrE
GMDDIDLE_00491 4.8e-137 thrE S Putative threonine/serine exporter
GMDDIDLE_00492 4.1e-289 S ABC transporter
GMDDIDLE_00493 6.6e-63
GMDDIDLE_00494 2.2e-102 rimL J Acetyltransferase (GNAT) domain
GMDDIDLE_00495 1e-34
GMDDIDLE_00496 2.3e-122 S Protein of unknown function (DUF554)
GMDDIDLE_00497 3.6e-211 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GMDDIDLE_00498 0.0 pepF E oligoendopeptidase F
GMDDIDLE_00499 1e-13 Z012_06740 S Fic/DOC family
GMDDIDLE_00500 2.9e-31
GMDDIDLE_00501 6e-70 doc S Prophage maintenance system killer protein
GMDDIDLE_00502 4.4e-216 2.1.1.14 E methionine synthase, vitamin-B12 independent
GMDDIDLE_00503 6.1e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
GMDDIDLE_00504 7.2e-262 lctP C L-lactate permease
GMDDIDLE_00505 7.9e-127 znuB U ABC 3 transport family
GMDDIDLE_00506 3e-108 fhuC P ABC transporter
GMDDIDLE_00507 2.1e-139 psaA P Belongs to the bacterial solute-binding protein 9 family
GMDDIDLE_00508 1.2e-42 K helix_turn_helix, Arsenical Resistance Operon Repressor
GMDDIDLE_00509 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
GMDDIDLE_00510 2.2e-168 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
GMDDIDLE_00511 1.8e-136 fruR K DeoR C terminal sensor domain
GMDDIDLE_00512 3e-218 natB CP ABC-2 family transporter protein
GMDDIDLE_00513 5.9e-163 natA S ABC transporter, ATP-binding protein
GMDDIDLE_00514 4.9e-29
GMDDIDLE_00515 3.6e-08
GMDDIDLE_00516 7.9e-57
GMDDIDLE_00517 1.4e-24
GMDDIDLE_00518 6.9e-30 yozG K Transcriptional regulator
GMDDIDLE_00519 1.8e-77
GMDDIDLE_00520 9.2e-10
GMDDIDLE_00521 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
GMDDIDLE_00522 2.5e-272 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
GMDDIDLE_00523 1e-24
GMDDIDLE_00524 1.2e-25
GMDDIDLE_00525 4.7e-32
GMDDIDLE_00526 3.1e-53 S Enterocin A Immunity
GMDDIDLE_00527 7.7e-140 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
GMDDIDLE_00528 5.5e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GMDDIDLE_00529 4.6e-208 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
GMDDIDLE_00530 9.6e-121 K response regulator
GMDDIDLE_00531 3e-39 S HicB family
GMDDIDLE_00532 1.8e-205 L Probable transposase
GMDDIDLE_00534 0.0 V ABC transporter
GMDDIDLE_00535 4e-301 V ABC transporter, ATP-binding protein
GMDDIDLE_00536 5.3e-107 XK27_01040 S Protein of unknown function (DUF1129)
GMDDIDLE_00537 3.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
GMDDIDLE_00538 2.8e-44 yyzM S Bacterial protein of unknown function (DUF951)
GMDDIDLE_00539 1.9e-153 spo0J K Belongs to the ParB family
GMDDIDLE_00540 3.4e-138 soj D Sporulation initiation inhibitor
GMDDIDLE_00541 3.6e-146 noc K Belongs to the ParB family
GMDDIDLE_00542 1.2e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
GMDDIDLE_00543 3e-53 cvpA S Colicin V production protein
GMDDIDLE_00545 9.5e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GMDDIDLE_00546 6e-151 3.1.3.48 T Tyrosine phosphatase family
GMDDIDLE_00547 2e-97 azr 1.5.1.36 S NADPH-dependent FMN reductase
GMDDIDLE_00548 2.4e-95 nqr 1.5.1.36 S NADPH-dependent FMN reductase
GMDDIDLE_00549 6.3e-111 K WHG domain
GMDDIDLE_00550 8e-38
GMDDIDLE_00551 3.4e-274 pipD E Dipeptidase
GMDDIDLE_00552 1.5e-102 devA 3.6.3.25 V ABC transporter, ATP-binding protein
GMDDIDLE_00553 9.5e-176 hrtB V ABC transporter permease
GMDDIDLE_00554 4.2e-92 ygfC K Bacterial regulatory proteins, tetR family
GMDDIDLE_00555 3.5e-111 G phosphoglycerate mutase
GMDDIDLE_00556 1.9e-141 aroD S Alpha/beta hydrolase family
GMDDIDLE_00557 1.7e-142 S Belongs to the UPF0246 family
GMDDIDLE_00558 9e-121
GMDDIDLE_00559 3e-155 2.7.7.12 C Domain of unknown function (DUF4931)
GMDDIDLE_00560 1.6e-94 S Putative peptidoglycan binding domain
GMDDIDLE_00561 5.5e-81 S Putative peptidoglycan binding domain
GMDDIDLE_00562 3.4e-15
GMDDIDLE_00563 2e-239 L transposase, IS605 OrfB family
GMDDIDLE_00564 2e-127 liaI S membrane
GMDDIDLE_00565 3e-78 XK27_02470 K LytTr DNA-binding domain
GMDDIDLE_00566 7.3e-19 S Sugar efflux transporter for intercellular exchange
GMDDIDLE_00567 1.8e-249 dtpT U amino acid peptide transporter
GMDDIDLE_00568 0.0 pepN 3.4.11.2 E aminopeptidase
GMDDIDLE_00569 2.8e-47 lysM M LysM domain
GMDDIDLE_00570 5.1e-176
GMDDIDLE_00571 5.8e-209 mdtG EGP Major facilitator Superfamily
GMDDIDLE_00572 1.2e-263
GMDDIDLE_00573 3.3e-22 glsA 3.5.1.2 E Belongs to the glutaminase family
GMDDIDLE_00574 1.7e-86 glsA 3.5.1.2 E Belongs to the glutaminase family
GMDDIDLE_00575 3.1e-131 3.1.3.48 T Tyrosine phosphatase family
GMDDIDLE_00576 9e-22 S Protein of unknown function (DUF3923)
GMDDIDLE_00577 1.1e-54
GMDDIDLE_00578 2.9e-45 S MazG-like family
GMDDIDLE_00579 2.4e-59
GMDDIDLE_00580 3.8e-88 speG J Acetyltransferase (GNAT) domain
GMDDIDLE_00581 1.5e-34
GMDDIDLE_00582 3.1e-284 V ABC transporter transmembrane region
GMDDIDLE_00583 2.2e-287 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GMDDIDLE_00584 1e-229 S Tetratricopeptide repeat protein
GMDDIDLE_00585 2.3e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
GMDDIDLE_00586 1.9e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
GMDDIDLE_00587 5.5e-212 rpsA 1.17.7.4 J Ribosomal protein S1
GMDDIDLE_00588 2.2e-114 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
GMDDIDLE_00589 2.7e-18 M Lysin motif
GMDDIDLE_00590 7.9e-115 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GMDDIDLE_00591 3.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GMDDIDLE_00592 4.1e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GMDDIDLE_00593 7.6e-132 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
GMDDIDLE_00594 2.6e-61 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
GMDDIDLE_00595 9e-167 xerD D recombinase XerD
GMDDIDLE_00596 5.5e-169 cvfB S S1 domain
GMDDIDLE_00597 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
GMDDIDLE_00598 3.3e-183 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
GMDDIDLE_00599 0.0 dnaE 2.7.7.7 L DNA polymerase
GMDDIDLE_00600 2.3e-23 S Protein of unknown function (DUF2929)
GMDDIDLE_00601 3.6e-309 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
GMDDIDLE_00602 1.3e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
GMDDIDLE_00603 1.5e-34 yrvD S Lipopolysaccharide assembly protein A domain
GMDDIDLE_00604 1.6e-143 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
GMDDIDLE_00605 5.8e-177 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
GMDDIDLE_00606 3.7e-295 I Acyltransferase
GMDDIDLE_00607 1.7e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GMDDIDLE_00608 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
GMDDIDLE_00609 1.8e-110 dedA 3.1.3.1 S SNARE associated Golgi protein
GMDDIDLE_00610 6.9e-243 yfnA E Amino Acid
GMDDIDLE_00611 2.3e-181 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GMDDIDLE_00612 5.2e-150 yxeH S hydrolase
GMDDIDLE_00613 6.6e-156 S reductase
GMDDIDLE_00614 5.2e-287 P ABC transporter
GMDDIDLE_00615 3.9e-282 V ABC-type multidrug transport system, ATPase and permease components
GMDDIDLE_00616 2.4e-251 yifK E Amino acid permease
GMDDIDLE_00617 1.8e-178 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GMDDIDLE_00618 1.5e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
GMDDIDLE_00619 0.0 aha1 P E1-E2 ATPase
GMDDIDLE_00620 2.9e-176 F DNA/RNA non-specific endonuclease
GMDDIDLE_00621 2e-160 metQ2 P Belongs to the nlpA lipoprotein family
GMDDIDLE_00622 1.2e-189 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GMDDIDLE_00623 2e-73 metI P ABC transporter permease
GMDDIDLE_00624 9e-267 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
GMDDIDLE_00625 2.5e-261 frdC 1.3.5.4 C FAD binding domain
GMDDIDLE_00626 3.1e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
GMDDIDLE_00627 3.7e-254 pepC 3.4.22.40 E Peptidase C1-like family
GMDDIDLE_00628 1.3e-133 hxlA 6.2.1.3 H Aldolase/RraA
GMDDIDLE_00629 5.2e-273 P Sodium:sulfate symporter transmembrane region
GMDDIDLE_00630 5.8e-154 ydjP I Alpha/beta hydrolase family
GMDDIDLE_00631 2.2e-196 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
GMDDIDLE_00632 1.2e-43 citD C Covalent carrier of the coenzyme of citrate lyase
GMDDIDLE_00633 1.1e-167 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
GMDDIDLE_00634 4.9e-290 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
GMDDIDLE_00635 9.3e-72 yeaL S Protein of unknown function (DUF441)
GMDDIDLE_00636 1.8e-22
GMDDIDLE_00637 3.6e-146 cbiQ P cobalt transport
GMDDIDLE_00638 0.0 ykoD P ABC transporter, ATP-binding protein
GMDDIDLE_00639 7.4e-95 S UPF0397 protein
GMDDIDLE_00640 2.9e-66 S Domain of unknown function DUF1828
GMDDIDLE_00641 4.2e-09
GMDDIDLE_00642 5e-51
GMDDIDLE_00643 2.6e-177 citR K Putative sugar-binding domain
GMDDIDLE_00644 1.9e-250 yjjP S Putative threonine/serine exporter
GMDDIDLE_00645 8.2e-85 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GMDDIDLE_00646 9.3e-175 prmA J Ribosomal protein L11 methyltransferase
GMDDIDLE_00647 2.9e-60
GMDDIDLE_00648 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GMDDIDLE_00649 6e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GMDDIDLE_00650 6.8e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
GMDDIDLE_00651 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
GMDDIDLE_00652 1.2e-222 patA 2.6.1.1 E Aminotransferase
GMDDIDLE_00653 1.8e-215 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GMDDIDLE_00654 4.6e-08 L Transposase
GMDDIDLE_00655 7.5e-161 S SLAP domain
GMDDIDLE_00656 2.5e-79 S Bacteriocin helveticin-J
GMDDIDLE_00657 2.1e-46
GMDDIDLE_00658 3.7e-39 ps115 K Helix-turn-helix XRE-family like proteins
GMDDIDLE_00659 7.8e-50 E Zn peptidase
GMDDIDLE_00660 1.4e-197 EGP Major facilitator Superfamily
GMDDIDLE_00661 9.1e-105 ropB K Transcriptional regulator
GMDDIDLE_00662 1.5e-95 tnpR1 L Resolvase, N terminal domain
GMDDIDLE_00663 8.8e-47
GMDDIDLE_00666 2e-49
GMDDIDLE_00667 2.7e-248 S DNA primase
GMDDIDLE_00669 3.3e-74
GMDDIDLE_00670 0.0 kup P Transport of potassium into the cell
GMDDIDLE_00671 0.0 pepO 3.4.24.71 O Peptidase family M13
GMDDIDLE_00672 4.7e-211 yttB EGP Major facilitator Superfamily
GMDDIDLE_00673 3.4e-230 XK27_04775 S PAS domain
GMDDIDLE_00674 3.6e-103 S Iron-sulfur cluster assembly protein
GMDDIDLE_00675 8.7e-141 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GMDDIDLE_00676 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
GMDDIDLE_00677 5.6e-255 yxbA 6.3.1.12 S ATP-grasp enzyme
GMDDIDLE_00678 0.0 asnB 6.3.5.4 E Asparagine synthase
GMDDIDLE_00679 4.2e-272 S Calcineurin-like phosphoesterase
GMDDIDLE_00680 8.7e-84
GMDDIDLE_00681 4.7e-105 tag 3.2.2.20 L glycosylase
GMDDIDLE_00682 2.2e-148 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
GMDDIDLE_00683 8.8e-118 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
GMDDIDLE_00684 4.1e-136 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
GMDDIDLE_00685 4.1e-151 phnD P Phosphonate ABC transporter
GMDDIDLE_00686 5.2e-84 uspA T universal stress protein
GMDDIDLE_00687 2.6e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
GMDDIDLE_00688 8.6e-87 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GMDDIDLE_00689 3.6e-90 ntd 2.4.2.6 F Nucleoside
GMDDIDLE_00690 2.3e-08
GMDDIDLE_00691 4.5e-274 S Archaea bacterial proteins of unknown function
GMDDIDLE_00692 1.5e-61 S Bacterial toxin of type II toxin-antitoxin system, YafQ
GMDDIDLE_00693 9.8e-46
GMDDIDLE_00694 4.2e-46
GMDDIDLE_00695 2.5e-31
GMDDIDLE_00696 6.5e-164 map 3.4.11.18 E Methionine Aminopeptidase
GMDDIDLE_00697 3.6e-163 yihY S Belongs to the UPF0761 family
GMDDIDLE_00698 7.3e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
GMDDIDLE_00699 2.3e-215 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
GMDDIDLE_00700 1.5e-214 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
GMDDIDLE_00701 1.9e-217 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
GMDDIDLE_00702 9.4e-46
GMDDIDLE_00703 3.7e-176 D Alpha beta
GMDDIDLE_00704 4.1e-264 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GMDDIDLE_00705 5.6e-144 recX 2.4.1.337 GT4 S Regulatory protein RecX
GMDDIDLE_00706 1.6e-85
GMDDIDLE_00707 1.6e-74
GMDDIDLE_00708 1.1e-140 hlyX S Transporter associated domain
GMDDIDLE_00709 7.9e-304 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
GMDDIDLE_00710 9.2e-147
GMDDIDLE_00711 2.5e-265 V ABC transporter transmembrane region
GMDDIDLE_00712 1.8e-16
GMDDIDLE_00713 6.6e-51 L Transposase
GMDDIDLE_00714 5.2e-30
GMDDIDLE_00715 2.3e-44 XK27_09445 S Domain of unknown function (DUF1827)
GMDDIDLE_00716 0.0 clpE O Belongs to the ClpA ClpB family
GMDDIDLE_00717 5.3e-26
GMDDIDLE_00718 8.5e-41 ptsH G phosphocarrier protein HPR
GMDDIDLE_00719 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GMDDIDLE_00720 2.3e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
GMDDIDLE_00721 2.5e-138 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
GMDDIDLE_00722 5.8e-160 coiA 3.6.4.12 S Competence protein
GMDDIDLE_00723 3.5e-114 yjbH Q Thioredoxin
GMDDIDLE_00724 3.6e-111 yjbK S CYTH
GMDDIDLE_00725 1.2e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
GMDDIDLE_00726 3.8e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GMDDIDLE_00727 2.4e-172 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GMDDIDLE_00728 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
GMDDIDLE_00729 2.5e-92 S SNARE associated Golgi protein
GMDDIDLE_00730 6.3e-201 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
GMDDIDLE_00731 2.2e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
GMDDIDLE_00732 2.6e-214 yubA S AI-2E family transporter
GMDDIDLE_00733 4.2e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
GMDDIDLE_00734 1.7e-69 WQ51_03320 S Protein of unknown function (DUF1149)
GMDDIDLE_00735 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
GMDDIDLE_00736 7.7e-222 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
GMDDIDLE_00737 3.9e-237 S Peptidase M16
GMDDIDLE_00738 1.4e-133 IQ Enoyl-(Acyl carrier protein) reductase
GMDDIDLE_00739 5.2e-97 ymfM S Helix-turn-helix domain
GMDDIDLE_00740 1.1e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GMDDIDLE_00741 8.5e-196 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GMDDIDLE_00742 4.3e-220 rny S Endoribonuclease that initiates mRNA decay
GMDDIDLE_00743 1.3e-210 tagO 2.7.8.33, 2.7.8.35 M transferase
GMDDIDLE_00744 5.1e-119 yvyE 3.4.13.9 S YigZ family
GMDDIDLE_00745 9.5e-247 comFA L Helicase C-terminal domain protein
GMDDIDLE_00746 3.1e-135 comFC S Competence protein
GMDDIDLE_00747 4.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GMDDIDLE_00748 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GMDDIDLE_00749 5.9e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
GMDDIDLE_00750 5.1e-17
GMDDIDLE_00751 1.4e-178 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
GMDDIDLE_00752 1.9e-158 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GMDDIDLE_00753 3.9e-187 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
GMDDIDLE_00754 3.9e-181 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
GMDDIDLE_00755 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
GMDDIDLE_00756 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
GMDDIDLE_00757 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
GMDDIDLE_00758 1.4e-90 S Short repeat of unknown function (DUF308)
GMDDIDLE_00759 6.2e-165 rapZ S Displays ATPase and GTPase activities
GMDDIDLE_00760 1.1e-195 ybhK S Required for morphogenesis under gluconeogenic growth conditions
GMDDIDLE_00761 2.1e-171 whiA K May be required for sporulation
GMDDIDLE_00762 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GMDDIDLE_00763 0.0 S SH3-like domain
GMDDIDLE_00764 4.9e-111 ybbL S ABC transporter, ATP-binding protein
GMDDIDLE_00765 1.6e-129 ybbM S Uncharacterised protein family (UPF0014)
GMDDIDLE_00766 5.7e-95 S Domain of unknown function (DUF4811)
GMDDIDLE_00767 6.4e-263 lmrB EGP Major facilitator Superfamily
GMDDIDLE_00768 5.4e-77 K MerR HTH family regulatory protein
GMDDIDLE_00769 2.8e-117 cylA V ABC transporter
GMDDIDLE_00770 3.4e-91 cylB V ABC-2 type transporter
GMDDIDLE_00771 6.7e-46 K LytTr DNA-binding domain
GMDDIDLE_00772 2.6e-33 S Protein of unknown function (DUF3021)
GMDDIDLE_00773 1.3e-142 S Cysteine-rich secretory protein family
GMDDIDLE_00774 1.7e-273 ycaM E amino acid
GMDDIDLE_00775 2.4e-289
GMDDIDLE_00777 9.5e-189 cggR K Putative sugar-binding domain
GMDDIDLE_00778 6.5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
GMDDIDLE_00779 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
GMDDIDLE_00780 1.7e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GMDDIDLE_00781 1.2e-94
GMDDIDLE_00782 1.8e-156 ycsE S Sucrose-6F-phosphate phosphohydrolase
GMDDIDLE_00783 9.7e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GMDDIDLE_00784 1.8e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
GMDDIDLE_00785 1.4e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
GMDDIDLE_00786 4e-98 dnaQ 2.7.7.7 L DNA polymerase III
GMDDIDLE_00787 1.8e-164 murB 1.3.1.98 M Cell wall formation
GMDDIDLE_00788 4.1e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
GMDDIDLE_00789 1.4e-131 potB P ABC transporter permease
GMDDIDLE_00790 2.1e-127 potC P ABC transporter permease
GMDDIDLE_00791 7.3e-208 potD P ABC transporter
GMDDIDLE_00792 6.4e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
GMDDIDLE_00793 3.7e-171 ybbR S YbbR-like protein
GMDDIDLE_00794 3.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GMDDIDLE_00795 6.4e-148 S hydrolase
GMDDIDLE_00796 6e-76 K Penicillinase repressor
GMDDIDLE_00797 2.5e-119
GMDDIDLE_00798 7.4e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
GMDDIDLE_00799 2.7e-208 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
GMDDIDLE_00800 1.7e-143 licT K CAT RNA binding domain
GMDDIDLE_00801 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
GMDDIDLE_00802 1e-300 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GMDDIDLE_00803 5e-176 D Alpha beta
GMDDIDLE_00804 1.8e-303 E Amino acid permease
GMDDIDLE_00806 9.8e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GMDDIDLE_00807 3.2e-110 ylbE GM NAD(P)H-binding
GMDDIDLE_00808 2e-94 S VanZ like family
GMDDIDLE_00809 8.9e-133 yebC K Transcriptional regulatory protein
GMDDIDLE_00810 1.9e-178 comGA NU Type II IV secretion system protein
GMDDIDLE_00811 2.7e-172 comGB NU type II secretion system
GMDDIDLE_00812 3.1e-43 comGC U competence protein ComGC
GMDDIDLE_00813 7.4e-71
GMDDIDLE_00814 2.3e-41
GMDDIDLE_00815 3.8e-77 comGF U Putative Competence protein ComGF
GMDDIDLE_00816 1.8e-20
GMDDIDLE_00817 3.5e-188 ytxK 2.1.1.72 L N-6 DNA Methylase
GMDDIDLE_00818 5.4e-220 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GMDDIDLE_00820 9.6e-89 M Protein of unknown function (DUF3737)
GMDDIDLE_00821 1.2e-224 patB 4.4.1.8 E Aminotransferase, class I
GMDDIDLE_00822 1e-189 manA 5.3.1.8 G mannose-6-phosphate isomerase
GMDDIDLE_00823 2.1e-64 S SdpI/YhfL protein family
GMDDIDLE_00824 4.4e-129 K Transcriptional regulatory protein, C terminal
GMDDIDLE_00825 7.2e-267 yclK 2.7.13.3, 4.6.1.1 T Histidine kinase
GMDDIDLE_00826 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GMDDIDLE_00827 3.8e-105 vanZ V VanZ like family
GMDDIDLE_00828 1.1e-256 pgi 5.3.1.9 G Belongs to the GPI family
GMDDIDLE_00829 1.7e-217 EGP Major facilitator Superfamily
GMDDIDLE_00830 1e-195 ampC V Beta-lactamase
GMDDIDLE_00833 1.7e-262 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
GMDDIDLE_00834 1.3e-113 tdk 2.7.1.21 F thymidine kinase
GMDDIDLE_00835 6.9e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GMDDIDLE_00836 2.5e-155 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
GMDDIDLE_00837 3.7e-190 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
GMDDIDLE_00838 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GMDDIDLE_00839 1e-128 atpB C it plays a direct role in the translocation of protons across the membrane
GMDDIDLE_00840 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GMDDIDLE_00841 3.4e-46 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GMDDIDLE_00842 4.4e-92 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GMDDIDLE_00843 2.5e-283 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GMDDIDLE_00844 8.9e-173 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GMDDIDLE_00845 3.3e-240 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GMDDIDLE_00846 9e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
GMDDIDLE_00847 6.9e-31 ywzB S Protein of unknown function (DUF1146)
GMDDIDLE_00848 2.5e-178 mbl D Cell shape determining protein MreB Mrl
GMDDIDLE_00849 5.9e-51 yidD S Could be involved in insertion of integral membrane proteins into the membrane
GMDDIDLE_00850 1.5e-33 S Protein of unknown function (DUF2969)
GMDDIDLE_00851 1.2e-216 rodA D Belongs to the SEDS family
GMDDIDLE_00852 1.8e-78 usp6 T universal stress protein
GMDDIDLE_00853 8.4e-39
GMDDIDLE_00854 7.4e-239 rarA L recombination factor protein RarA
GMDDIDLE_00855 4.9e-84 yueI S Protein of unknown function (DUF1694)
GMDDIDLE_00856 1.4e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GMDDIDLE_00857 1.2e-292 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
GMDDIDLE_00858 4.3e-214 iscS2 2.8.1.7 E Aminotransferase class V
GMDDIDLE_00859 2e-225 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GMDDIDLE_00861 3.5e-82 K Helix-turn-helix XRE-family like proteins
GMDDIDLE_00862 2.9e-61
GMDDIDLE_00863 5.7e-33 gepA S Protein of unknown function (DUF4065)
GMDDIDLE_00864 4e-35
GMDDIDLE_00865 4.6e-40 4.2.1.5 M Mandelate racemase muconate lactonizing enzyme
GMDDIDLE_00866 9.5e-173 4.2.1.40 M Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
GMDDIDLE_00867 6.7e-211 gudD 4.2.1.40 M Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
GMDDIDLE_00868 5.5e-141 C Citrate transporter
GMDDIDLE_00869 3.4e-73 K LysR substrate binding domain
GMDDIDLE_00870 8e-236 L Transposase DDE domain
GMDDIDLE_00871 1e-122 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
GMDDIDLE_00872 7.8e-166 4.2.1.6, 5.1.2.2 M Mandelate racemase muconate lactonizing enzyme
GMDDIDLE_00873 5.7e-90 mcyI 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
GMDDIDLE_00874 4e-66 ydiN EGP Major Facilitator Superfamily
GMDDIDLE_00875 3.8e-29 K Psort location Cytoplasmic, score
GMDDIDLE_00876 8.3e-182 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
GMDDIDLE_00877 2.3e-116 dedA S SNARE-like domain protein
GMDDIDLE_00878 3.1e-99 S Protein of unknown function (DUF1461)
GMDDIDLE_00879 6.9e-144 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
GMDDIDLE_00880 6.5e-102 yutD S Protein of unknown function (DUF1027)
GMDDIDLE_00881 3.1e-275 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
GMDDIDLE_00882 4.3e-55
GMDDIDLE_00883 4e-267 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
GMDDIDLE_00884 4.9e-182 ccpA K catabolite control protein A
GMDDIDLE_00885 8.3e-215 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
GMDDIDLE_00886 1.3e-36
GMDDIDLE_00887 9.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
GMDDIDLE_00888 8.1e-146 ykuT M mechanosensitive ion channel
GMDDIDLE_00889 1.6e-111 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GMDDIDLE_00890 1.7e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
GMDDIDLE_00891 1.1e-71 yslB S Protein of unknown function (DUF2507)
GMDDIDLE_00892 9.7e-59 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GMDDIDLE_00893 3.5e-54 trxA O Belongs to the thioredoxin family
GMDDIDLE_00894 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
GMDDIDLE_00895 1.1e-50 yrzB S Belongs to the UPF0473 family
GMDDIDLE_00896 6.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GMDDIDLE_00897 2e-42 yrzL S Belongs to the UPF0297 family
GMDDIDLE_00898 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GMDDIDLE_00899 4e-227 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
GMDDIDLE_00900 4.7e-182 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
GMDDIDLE_00901 5.9e-216 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GMDDIDLE_00902 3.6e-287 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GMDDIDLE_00903 9.6e-41 yajC U Preprotein translocase
GMDDIDLE_00904 1.1e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
GMDDIDLE_00905 1.7e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
GMDDIDLE_00906 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
GMDDIDLE_00907 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
GMDDIDLE_00908 2.6e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
GMDDIDLE_00909 1.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GMDDIDLE_00910 3e-74
GMDDIDLE_00911 2.3e-181 M CHAP domain
GMDDIDLE_00912 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
GMDDIDLE_00913 3.7e-295 scrB 3.2.1.26 GH32 G invertase
GMDDIDLE_00914 3.9e-184 scrR K helix_turn _helix lactose operon repressor
GMDDIDLE_00915 5.8e-112 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
GMDDIDLE_00916 0.0 uup S ABC transporter, ATP-binding protein
GMDDIDLE_00917 1.7e-154 L COG2963 Transposase and inactivated derivatives
GMDDIDLE_00918 7.2e-37
GMDDIDLE_00919 1.2e-230 L COG3547 Transposase and inactivated derivatives
GMDDIDLE_00920 2.5e-197 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GMDDIDLE_00921 2.1e-96 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
GMDDIDLE_00922 2.4e-133 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
GMDDIDLE_00923 2.4e-87 S ECF transporter, substrate-specific component
GMDDIDLE_00924 1.5e-135 fat 3.1.2.21 I Acyl-ACP thioesterase
GMDDIDLE_00925 7.9e-157 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GMDDIDLE_00926 1.8e-59 yabA L Involved in initiation control of chromosome replication
GMDDIDLE_00927 3e-156 holB 2.7.7.7 L DNA polymerase III
GMDDIDLE_00928 8.9e-53 yaaQ S Cyclic-di-AMP receptor
GMDDIDLE_00929 1.6e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GMDDIDLE_00930 1.1e-34 S Protein of unknown function (DUF2508)
GMDDIDLE_00931 1.6e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GMDDIDLE_00932 2.8e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
GMDDIDLE_00933 1e-34 M lipopolysaccharide 3-alpha-galactosyltransferase activity
GMDDIDLE_00934 9.4e-43 2.4.1.58 GT8 M family 8
GMDDIDLE_00935 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GMDDIDLE_00936 2.2e-90 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
GMDDIDLE_00937 9e-26
GMDDIDLE_00938 1.3e-116 rsmC 2.1.1.172 J Methyltransferase
GMDDIDLE_00939 6.6e-140 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
GMDDIDLE_00940 1.8e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
GMDDIDLE_00941 7e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GMDDIDLE_00942 2.8e-07 GT2,GT4 M family 8
GMDDIDLE_00943 0.0 S PglZ domain
GMDDIDLE_00944 1.4e-29 K Helix-turn-helix
GMDDIDLE_00945 3e-30 E IrrE N-terminal-like domain
GMDDIDLE_00946 2.7e-46 S Domain of unknown function (DUF4417)
GMDDIDLE_00947 2.4e-12
GMDDIDLE_00950 1.3e-301 2.1.1.72 LV Eco57I restriction-modification methylase
GMDDIDLE_00951 7.3e-223 FbpA 3.1.21.3, 3.2.1.170 GH38 K RNA-binding protein homologous to eukaryotic snRNP
GMDDIDLE_00952 1.3e-89 S Domain of unknown function (DUF1788)
GMDDIDLE_00953 1.8e-83 S Putative inner membrane protein (DUF1819)
GMDDIDLE_00954 5.5e-85 bgl 3.2.1.21, 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GMDDIDLE_00955 1.4e-131 msmX P Belongs to the ABC transporter superfamily
GMDDIDLE_00956 1e-275 1.3.5.4 C FMN_bind
GMDDIDLE_00957 9.2e-227 P Sodium:sulfate symporter transmembrane region
GMDDIDLE_00958 8.3e-109 K LysR family
GMDDIDLE_00959 3.7e-273 1.3.5.4 C FMN_bind
GMDDIDLE_00960 8.8e-111 K LysR family
GMDDIDLE_00961 8.4e-71 3.6.4.12 S PD-(D/E)XK nuclease family transposase
GMDDIDLE_00962 1.9e-16 3.6.4.12 S PD-(D/E)XK nuclease family transposase
GMDDIDLE_00963 2.2e-120 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GMDDIDLE_00964 1.3e-55 dhaM 2.7.1.121 S PTS system fructose IIA component
GMDDIDLE_00965 1.9e-93 dhaL 2.7.1.121 S Dak2
GMDDIDLE_00966 8.3e-174 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
GMDDIDLE_00967 0.0 O Belongs to the peptidase S8 family
GMDDIDLE_00968 4.5e-260 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
GMDDIDLE_00969 1.4e-62
GMDDIDLE_00970 9e-124 L Transposase
GMDDIDLE_00971 2.1e-111 L Transposase
GMDDIDLE_00972 6.2e-145
GMDDIDLE_00973 1e-170
GMDDIDLE_00974 2e-263 glnA 6.3.1.2 E glutamine synthetase
GMDDIDLE_00975 2e-225 ynbB 4.4.1.1 P aluminum resistance
GMDDIDLE_00976 9.2e-170 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GMDDIDLE_00977 1.5e-65 yqhL P Rhodanese-like protein
GMDDIDLE_00978 9.7e-36 yqgQ S Bacterial protein of unknown function (DUF910)
GMDDIDLE_00979 5.3e-119 gluP 3.4.21.105 S Rhomboid family
GMDDIDLE_00980 1.4e-96 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
GMDDIDLE_00981 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
GMDDIDLE_00982 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
GMDDIDLE_00983 0.0 S membrane
GMDDIDLE_00984 5.2e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
GMDDIDLE_00985 1.3e-38 S RelB antitoxin
GMDDIDLE_00986 1.2e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
GMDDIDLE_00987 6.7e-44 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
GMDDIDLE_00988 4e-139 fhuC 3.6.3.34 HP abc transporter atp-binding protein
GMDDIDLE_00989 1.1e-148 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GMDDIDLE_00990 2.5e-158 isdE P Periplasmic binding protein
GMDDIDLE_00991 2e-113 M Iron Transport-associated domain
GMDDIDLE_00992 9.1e-139 L COG2826 Transposase and inactivated derivatives, IS30 family
GMDDIDLE_00993 2.9e-50 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
GMDDIDLE_00994 9.7e-83 S An automated process has identified a potential problem with this gene model
GMDDIDLE_00995 9.3e-131 S Protein of unknown function (DUF3100)
GMDDIDLE_00996 6.8e-221 3.5.1.47 S Peptidase dimerisation domain
GMDDIDLE_00997 1.8e-231 Q Imidazolonepropionase and related amidohydrolases
GMDDIDLE_00998 0.0 oppA E ABC transporter
GMDDIDLE_00999 1.2e-151 S Sucrose-6F-phosphate phosphohydrolase
GMDDIDLE_01000 8e-227 I Protein of unknown function (DUF2974)
GMDDIDLE_01001 3.5e-15 S Transglycosylase associated protein
GMDDIDLE_01003 3.9e-167 scrK 2.7.1.2, 2.7.1.4 GK ROK family
GMDDIDLE_01004 4.6e-166 degV S DegV family
GMDDIDLE_01005 3.5e-166 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
GMDDIDLE_01006 3.3e-253 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
GMDDIDLE_01007 5.7e-69 rplI J Binds to the 23S rRNA
GMDDIDLE_01008 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
GMDDIDLE_01009 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GMDDIDLE_01010 4.5e-78 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
GMDDIDLE_01011 9.4e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
GMDDIDLE_01012 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GMDDIDLE_01013 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GMDDIDLE_01014 1.1e-209 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GMDDIDLE_01015 2.6e-35 yaaA S S4 domain protein YaaA
GMDDIDLE_01016 2.4e-185 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
GMDDIDLE_01017 5.5e-245 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GMDDIDLE_01018 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
GMDDIDLE_01019 2.7e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
GMDDIDLE_01020 8.4e-146 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GMDDIDLE_01021 1.8e-251 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
GMDDIDLE_01022 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
GMDDIDLE_01023 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
GMDDIDLE_01024 2.1e-276 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GMDDIDLE_01025 1.9e-289 clcA P chloride
GMDDIDLE_01026 4e-32 E Zn peptidase
GMDDIDLE_01027 3.7e-58 ps115 K Helix-turn-helix XRE-family like proteins
GMDDIDLE_01028 1.7e-138 L An automated process has identified a potential problem with this gene model
GMDDIDLE_01029 1.5e-242 yisQ V MatE
GMDDIDLE_01030 3.5e-199 V MatE
GMDDIDLE_01031 5.3e-130 GK ROK family
GMDDIDLE_01032 1.7e-42 rhaS6 K helix_turn_helix, arabinose operon control protein
GMDDIDLE_01033 1.1e-82 L An automated process has identified a potential problem with this gene model
GMDDIDLE_01034 6.6e-212
GMDDIDLE_01035 1.2e-18
GMDDIDLE_01036 7e-248 EGP Sugar (and other) transporter
GMDDIDLE_01037 1.2e-105
GMDDIDLE_01038 8.2e-114 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
GMDDIDLE_01039 0.0 copA 3.6.3.54 P P-type ATPase
GMDDIDLE_01040 3.1e-49 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
GMDDIDLE_01041 3.5e-64 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
GMDDIDLE_01042 5.7e-74 atkY K Penicillinase repressor
GMDDIDLE_01043 1e-27
GMDDIDLE_01044 5e-227 pbuG S permease
GMDDIDLE_01045 1.3e-145 S haloacid dehalogenase-like hydrolase
GMDDIDLE_01046 1.1e-226 S cog cog1373
GMDDIDLE_01047 8e-61 K Transcriptional regulator
GMDDIDLE_01049 7.9e-42 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
GMDDIDLE_01051 3.1e-16 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
GMDDIDLE_01052 2.5e-40 relB L Addiction module antitoxin, RelB DinJ family
GMDDIDLE_01053 1.2e-231 pbuG S permease
GMDDIDLE_01054 8.6e-120 K helix_turn_helix, mercury resistance
GMDDIDLE_01055 1.1e-148 S ABC-2 family transporter protein
GMDDIDLE_01056 2.4e-78 V ATPases associated with a variety of cellular activities
GMDDIDLE_01057 4.5e-22 K Helix-turn-helix XRE-family like proteins
GMDDIDLE_01058 2.5e-86
GMDDIDLE_01059 1.7e-212 S Uncharacterized protein conserved in bacteria (DUF2325)
GMDDIDLE_01060 2.9e-235 G Bacterial extracellular solute-binding protein
GMDDIDLE_01061 7.7e-162 2.7.7.12 C Domain of unknown function (DUF4931)
GMDDIDLE_01062 5.4e-167 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GMDDIDLE_01063 1.3e-125 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GMDDIDLE_01064 0.0 kup P Transport of potassium into the cell
GMDDIDLE_01065 8.3e-176 rihB 3.2.2.1 F Nucleoside
GMDDIDLE_01066 3e-133 ydhQ K UbiC transcription regulator-associated domain protein
GMDDIDLE_01067 1.2e-154 S hydrolase
GMDDIDLE_01068 1.9e-59 S Enterocin A Immunity
GMDDIDLE_01069 3.7e-137 glcR K DeoR C terminal sensor domain
GMDDIDLE_01070 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
GMDDIDLE_01071 7.6e-160 rssA S Phospholipase, patatin family
GMDDIDLE_01072 7.5e-149 S hydrolase
GMDDIDLE_01073 0.0 glvC 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
GMDDIDLE_01074 4.1e-147 glvR K Helix-turn-helix domain, rpiR family
GMDDIDLE_01075 7e-81
GMDDIDLE_01076 2.9e-87 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GMDDIDLE_01077 2.1e-39
GMDDIDLE_01078 5e-119 C nitroreductase
GMDDIDLE_01079 6.3e-249 yhdP S Transporter associated domain
GMDDIDLE_01080 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
GMDDIDLE_01081 0.0 1.3.5.4 C FAD binding domain
GMDDIDLE_01082 0.0 1.3.5.4 C FAD binding domain
GMDDIDLE_01083 2.8e-230 potE E amino acid
GMDDIDLE_01084 1.8e-130 M Glycosyl hydrolases family 25
GMDDIDLE_01085 2.8e-211 yfmL 3.6.4.13 L DEAD DEAH box helicase
GMDDIDLE_01086 6.2e-249 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GMDDIDLE_01088 2e-216 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
GMDDIDLE_01089 3.1e-87 gtcA S Teichoic acid glycosylation protein
GMDDIDLE_01090 4.1e-80 fld C Flavodoxin
GMDDIDLE_01091 2.9e-81 C Flavodoxin
GMDDIDLE_01092 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
GMDDIDLE_01093 6.7e-245 ynbB 4.4.1.1 P aluminum resistance
GMDDIDLE_01094 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
GMDDIDLE_01095 1.7e-284 E Amino acid permease
GMDDIDLE_01096 1.6e-93 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
GMDDIDLE_01097 2e-274 pepV 3.5.1.18 E dipeptidase PepV
GMDDIDLE_01098 2e-88 mmuP E amino acid
GMDDIDLE_01099 1.1e-12 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
GMDDIDLE_01100 9.2e-65 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GMDDIDLE_01101 7.9e-67 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GMDDIDLE_01102 1.1e-152 xerD L Phage integrase, N-terminal SAM-like domain
GMDDIDLE_01103 4.1e-63 M LysM domain protein
GMDDIDLE_01104 3.8e-60 C Aldo keto reductase
GMDDIDLE_01105 4.8e-181 lacX 5.1.3.3 G Aldose 1-epimerase
GMDDIDLE_01106 1.2e-234 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
GMDDIDLE_01107 1.9e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
GMDDIDLE_01108 4.2e-140 xerC D Phage integrase, N-terminal SAM-like domain
GMDDIDLE_01109 2.7e-249 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
GMDDIDLE_01110 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GMDDIDLE_01111 1.3e-151 dprA LU DNA protecting protein DprA
GMDDIDLE_01112 9.8e-135 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GMDDIDLE_01113 2.5e-155 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
GMDDIDLE_01114 1.7e-185 yjcE P Sodium proton antiporter
GMDDIDLE_01115 1e-67 yjcE P NhaP-type Na H and K H
GMDDIDLE_01116 7.1e-36 yozE S Belongs to the UPF0346 family
GMDDIDLE_01117 5.7e-147 DegV S Uncharacterised protein, DegV family COG1307
GMDDIDLE_01118 1.2e-107 hlyIII S protein, hemolysin III
GMDDIDLE_01119 1.1e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
GMDDIDLE_01120 3.9e-159 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GMDDIDLE_01121 1.9e-86 3.4.21.96 S SLAP domain
GMDDIDLE_01122 1.8e-72 yagE E Amino acid permease
GMDDIDLE_01123 2.9e-28 yagE E amino acid
GMDDIDLE_01124 2e-80 yagE E amino acid
GMDDIDLE_01125 9e-150 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
GMDDIDLE_01126 3.7e-145 2.4.2.3 F Phosphorylase superfamily
GMDDIDLE_01127 7.6e-143 2.4.2.3 F Phosphorylase superfamily
GMDDIDLE_01128 4e-38 S AAA domain
GMDDIDLE_01129 2.7e-118 fbiB 6.3.2.12, 6.3.2.17, 6.3.2.31, 6.3.2.34 S F420-0:Gamma-glutamyl ligase
GMDDIDLE_01130 2.4e-55 cdd 2.4.2.4, 3.5.4.5 F Cytidine and deoxycytidylate deaminase zinc-binding region
GMDDIDLE_01131 9.8e-121 yhiD S MgtC family
GMDDIDLE_01141 1.3e-40
GMDDIDLE_01142 8.1e-60 D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
GMDDIDLE_01143 4.4e-91 D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
GMDDIDLE_01145 1.5e-18
GMDDIDLE_01146 6.4e-23
GMDDIDLE_01147 1.5e-21
GMDDIDLE_01148 1.3e-19
GMDDIDLE_01150 1e-158 repB EP Plasmid replication protein
GMDDIDLE_01151 6.7e-19
GMDDIDLE_01152 5.5e-188 L Belongs to the 'phage' integrase family
GMDDIDLE_01153 2e-29
GMDDIDLE_01154 2.5e-06 S LPXTG cell wall anchor motif
GMDDIDLE_01155 1.7e-145 S Putative ABC-transporter type IV
GMDDIDLE_01156 2e-79 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S cob(I)alamin adenosyltransferase
GMDDIDLE_01157 4.7e-54 S ECF transporter, substrate-specific component
GMDDIDLE_01158 2.7e-24 S Domain of unknown function (DUF4430)
GMDDIDLE_01159 4.7e-43 S Domain of unknown function (DUF4430)
GMDDIDLE_01160 0.0 rtpR 1.1.98.6, 1.17.4.1, 1.17.4.2 F ribonucleoside-triphosphate reductase activity
GMDDIDLE_01161 0.0 oppA E ABC transporter substrate-binding protein
GMDDIDLE_01162 2.4e-176 K AI-2E family transporter
GMDDIDLE_01163 2.6e-103 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
GMDDIDLE_01164 2.4e-18
GMDDIDLE_01165 5.2e-248 G Major Facilitator
GMDDIDLE_01166 8.8e-81 E Zn peptidase
GMDDIDLE_01167 2.7e-41 ps115 K Helix-turn-helix XRE-family like proteins
GMDDIDLE_01168 6.8e-43
GMDDIDLE_01169 2e-52 S Bacteriocin helveticin-J
GMDDIDLE_01170 1.3e-37
GMDDIDLE_01171 4.4e-45
GMDDIDLE_01172 7.4e-269 S Uncharacterised protein family (UPF0236)
GMDDIDLE_01173 3.1e-54
GMDDIDLE_01175 4.2e-258 pepC 3.4.22.40 E aminopeptidase
GMDDIDLE_01176 1.2e-123 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
GMDDIDLE_01177 5e-301 oppA E ABC transporter, substratebinding protein
GMDDIDLE_01178 5e-309 oppA E ABC transporter, substratebinding protein
GMDDIDLE_01179 1.7e-210 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GMDDIDLE_01180 1.1e-146 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
GMDDIDLE_01181 8e-188 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
GMDDIDLE_01182 4.7e-199 oppD P Belongs to the ABC transporter superfamily
GMDDIDLE_01183 1.9e-175 oppF P Belongs to the ABC transporter superfamily
GMDDIDLE_01184 1.4e-256 pepC 3.4.22.40 E aminopeptidase
GMDDIDLE_01185 2.6e-68 hsp O Belongs to the small heat shock protein (HSP20) family
GMDDIDLE_01186 2.6e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GMDDIDLE_01187 1.2e-112
GMDDIDLE_01189 1.2e-111 E Belongs to the SOS response-associated peptidase family
GMDDIDLE_01190 3.7e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
GMDDIDLE_01191 6.1e-90 comEB 3.5.4.12 F MafB19-like deaminase
GMDDIDLE_01192 2e-103 S TPM domain
GMDDIDLE_01193 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
GMDDIDLE_01195 1.3e-112 V ABC-type multidrug transport system, ATPase and permease components
GMDDIDLE_01196 3.4e-09 KLT Protein kinase domain
GMDDIDLE_01197 2.4e-159 V ABC-type multidrug transport system, ATPase and permease components
GMDDIDLE_01198 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GMDDIDLE_01199 5.1e-147 tatD L hydrolase, TatD family
GMDDIDLE_01200 1e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
GMDDIDLE_01201 4.6e-160 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
GMDDIDLE_01202 1.2e-39 veg S Biofilm formation stimulator VEG
GMDDIDLE_01203 7.7e-149 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
GMDDIDLE_01204 8.9e-174 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GMDDIDLE_01205 5.3e-80
GMDDIDLE_01206 0.0 S SLAP domain
GMDDIDLE_01207 6e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GMDDIDLE_01208 5.7e-169 2.7.1.2 GK ROK family
GMDDIDLE_01209 2.2e-36
GMDDIDLE_01210 1.9e-269 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
GMDDIDLE_01211 5.9e-68 S Domain of unknown function (DUF1934)
GMDDIDLE_01212 1.7e-46 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
GMDDIDLE_01213 4.5e-311 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
GMDDIDLE_01214 6.9e-245 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GMDDIDLE_01215 2.7e-75 K acetyltransferase
GMDDIDLE_01216 4.4e-285 pipD E Dipeptidase
GMDDIDLE_01217 4.1e-155 msmR K AraC-like ligand binding domain
GMDDIDLE_01218 1.6e-222 pbuX F xanthine permease
GMDDIDLE_01219 1.2e-103 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
GMDDIDLE_01220 1.6e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
GMDDIDLE_01221 8.8e-09 3.2.1.18 GH33 M Rib/alpha-like repeat
GMDDIDLE_01222 8.3e-27 L Transposase
GMDDIDLE_01223 7.3e-45 L An automated process has identified a potential problem with this gene model
GMDDIDLE_01224 7.1e-203 S YcaO cyclodehydratase, ATP-ad Mg2+-binding
GMDDIDLE_01225 8.8e-192 S YcaO cyclodehydratase, ATP-ad Mg2+-binding
GMDDIDLE_01226 1.3e-153 noxC 1.5.1.39 C Nitroreductase
GMDDIDLE_01227 6.6e-23
GMDDIDLE_01228 9e-130 ecfA P ABC-type multidrug transport system ATPase component
GMDDIDLE_01229 1.3e-120
GMDDIDLE_01230 2e-24
GMDDIDLE_01231 1e-241 steT_1 E amino acid
GMDDIDLE_01232 1.2e-140 puuD S peptidase C26
GMDDIDLE_01233 4.9e-135 S PFAM Archaeal ATPase
GMDDIDLE_01234 6.2e-244 yifK E Amino acid permease
GMDDIDLE_01235 1.3e-233 cycA E Amino acid permease
GMDDIDLE_01236 4.7e-114 lepB 3.4.21.89 U Belongs to the peptidase S26 family
GMDDIDLE_01237 3.2e-119 V ABC transporter transmembrane region
GMDDIDLE_01238 0.0 clpE O AAA domain (Cdc48 subfamily)
GMDDIDLE_01239 4.4e-166 S Alpha/beta hydrolase of unknown function (DUF915)
GMDDIDLE_01240 1.3e-238 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GMDDIDLE_01241 1.4e-29 XK27_06785 V ABC transporter, ATP-binding protein
GMDDIDLE_01242 1e-69 XK27_06785 V ABC transporter, ATP-binding protein
GMDDIDLE_01243 0.0 XK27_06780 V ABC transporter permease
GMDDIDLE_01244 1.9e-36
GMDDIDLE_01245 6.1e-291 ytgP S Polysaccharide biosynthesis protein
GMDDIDLE_01246 2.7e-137 lysA2 M Glycosyl hydrolases family 25
GMDDIDLE_01247 7.9e-134 S Protein of unknown function (DUF975)
GMDDIDLE_01248 3.5e-174 pbpX2 V Beta-lactamase
GMDDIDLE_01249 2.2e-243 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
GMDDIDLE_01250 1.7e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GMDDIDLE_01251 2.7e-238 dltB M MBOAT, membrane-bound O-acyltransferase family
GMDDIDLE_01252 6.5e-287 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GMDDIDLE_01253 5.2e-19 S D-Ala-teichoic acid biosynthesis protein
GMDDIDLE_01254 4.7e-48
GMDDIDLE_01255 5.3e-217 ywhK S Membrane
GMDDIDLE_01256 3.9e-81 ykuL S (CBS) domain
GMDDIDLE_01257 0.0 cadA P P-type ATPase
GMDDIDLE_01258 5.7e-62
GMDDIDLE_01259 2.8e-205 napA P Sodium/hydrogen exchanger family
GMDDIDLE_01260 1.9e-47 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
GMDDIDLE_01261 3.2e-43 S YoeB-like toxin of bacterial type II toxin-antitoxin system
GMDDIDLE_01262 2e-275 V ABC transporter transmembrane region
GMDDIDLE_01263 1.6e-47 S Putative adhesin
GMDDIDLE_01264 2.2e-134 mutR K Helix-turn-helix XRE-family like proteins
GMDDIDLE_01265 1.2e-53
GMDDIDLE_01266 2.4e-121 S CAAX protease self-immunity
GMDDIDLE_01267 1.8e-190 S DUF218 domain
GMDDIDLE_01268 0.0 macB_3 V ABC transporter, ATP-binding protein
GMDDIDLE_01269 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
GMDDIDLE_01270 2.8e-100 S ECF transporter, substrate-specific component
GMDDIDLE_01271 1.4e-201 tcsA S ABC transporter substrate-binding protein PnrA-like
GMDDIDLE_01272 1.5e-200 tcsA S ABC transporter substrate-binding protein PnrA-like
GMDDIDLE_01273 5.2e-284 xylG 3.6.3.17 S ABC transporter
GMDDIDLE_01274 4.3e-198 yufP S Belongs to the binding-protein-dependent transport system permease family
GMDDIDLE_01275 4.4e-172 yufQ S Belongs to the binding-protein-dependent transport system permease family
GMDDIDLE_01276 2.8e-159 yeaE S Aldo/keto reductase family
GMDDIDLE_01277 4.4e-132 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GMDDIDLE_01278 8.5e-119 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
GMDDIDLE_01279 2e-126 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
GMDDIDLE_01280 1.1e-67
GMDDIDLE_01281 3.7e-140 cof S haloacid dehalogenase-like hydrolase
GMDDIDLE_01282 2.2e-230 pbuG S permease
GMDDIDLE_01284 1.1e-13
GMDDIDLE_01285 7.8e-61 K Helix-turn-helix XRE-family like proteins
GMDDIDLE_01286 5.4e-217 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
GMDDIDLE_01287 0.0 G Belongs to the glycosyl hydrolase 31 family
GMDDIDLE_01288 7.3e-147 I alpha/beta hydrolase fold
GMDDIDLE_01289 4.2e-128 yibF S overlaps another CDS with the same product name
GMDDIDLE_01290 6.3e-202 yibE S overlaps another CDS with the same product name
GMDDIDLE_01291 3.6e-113
GMDDIDLE_01292 4.2e-203 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
GMDDIDLE_01293 1.4e-223 S Cysteine-rich secretory protein family
GMDDIDLE_01294 1.2e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GMDDIDLE_01295 2.8e-258 glnPH2 P ABC transporter permease
GMDDIDLE_01296 2.8e-135
GMDDIDLE_01297 2.4e-124 luxT K Bacterial regulatory proteins, tetR family
GMDDIDLE_01298 2.8e-182 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GMDDIDLE_01299 1e-53
GMDDIDLE_01300 2.5e-126 S Alpha/beta hydrolase family
GMDDIDLE_01301 5.4e-155 epsV 2.7.8.12 S glycosyl transferase family 2
GMDDIDLE_01302 4.4e-140 ypuA S Protein of unknown function (DUF1002)
GMDDIDLE_01303 3e-147 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GMDDIDLE_01304 3.8e-181 S Alpha/beta hydrolase of unknown function (DUF915)
GMDDIDLE_01305 2.5e-283 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GMDDIDLE_01306 4.2e-86
GMDDIDLE_01307 2.9e-133 cobB K SIR2 family
GMDDIDLE_01308 3.2e-92 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
GMDDIDLE_01309 9.6e-125 terC P Integral membrane protein TerC family
GMDDIDLE_01310 2e-64 yeaO S Protein of unknown function, DUF488
GMDDIDLE_01311 4e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
GMDDIDLE_01312 1.3e-290 glnP P ABC transporter permease
GMDDIDLE_01313 4.3e-138 glnQ E ABC transporter, ATP-binding protein
GMDDIDLE_01314 1.2e-137 S Protein of unknown function (DUF805)
GMDDIDLE_01315 7.9e-157 L HNH nucleases
GMDDIDLE_01316 1e-119 yfbR S HD containing hydrolase-like enzyme
GMDDIDLE_01317 1.8e-177 G Glycosyl hydrolases family 8
GMDDIDLE_01318 5.9e-217 ydaM M Glycosyl transferase
GMDDIDLE_01320 4e-116
GMDDIDLE_01321 1.2e-17
GMDDIDLE_01322 4.2e-107 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
GMDDIDLE_01323 1.3e-63 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
GMDDIDLE_01324 1.4e-115 lacA 2.3.1.79 S Transferase hexapeptide repeat
GMDDIDLE_01325 9.3e-204 pbpX1 V Beta-lactamase
GMDDIDLE_01326 5.1e-100 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
GMDDIDLE_01327 1.1e-93 S ECF-type riboflavin transporter, S component
GMDDIDLE_01328 2e-230 S Putative peptidoglycan binding domain
GMDDIDLE_01329 1.1e-83 K Acetyltransferase (GNAT) domain
GMDDIDLE_01330 1.7e-251 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
GMDDIDLE_01331 4.7e-190 yrvN L AAA C-terminal domain
GMDDIDLE_01332 1.1e-63 spxA_2 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
GMDDIDLE_01333 4.2e-269 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
GMDDIDLE_01334 1.3e-17
GMDDIDLE_01335 5.6e-239 G Bacterial extracellular solute-binding protein
GMDDIDLE_01336 1.3e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
GMDDIDLE_01337 1.2e-235 XK27_01810 S Calcineurin-like phosphoesterase
GMDDIDLE_01339 0.0 S SLAP domain
GMDDIDLE_01340 0.0 hsdR 3.1.21.3 L DEAD/DEAH box helicase
GMDDIDLE_01341 1.7e-166 S AAA domain, putative AbiEii toxin, Type IV TA system
GMDDIDLE_01342 2.6e-42 S RloB-like protein
GMDDIDLE_01343 1.7e-260 hsdM 2.1.1.72 V type I restriction-modification system
GMDDIDLE_01344 1.3e-30 3.1.21.3 V COG0732 Restriction endonuclease S subunits
GMDDIDLE_01345 4e-127 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
GMDDIDLE_01346 8.5e-116 S MTH538 TIR-like domain (DUF1863)
GMDDIDLE_01347 1.3e-75
GMDDIDLE_01348 8.5e-143
GMDDIDLE_01350 0.0 yfjM S Protein of unknown function DUF262
GMDDIDLE_01351 6.4e-23 S Domain of unknown function (DUF3841)
GMDDIDLE_01352 5.3e-90
GMDDIDLE_01353 7.9e-68 S Sel1-like repeats.
GMDDIDLE_01354 2.2e-78 S HIRAN
GMDDIDLE_01355 2.6e-32
GMDDIDLE_01356 1e-179
GMDDIDLE_01357 1.5e-103 3.1.4.37 S AAA domain
GMDDIDLE_01358 1.8e-24 S Sel1-like repeats.
GMDDIDLE_01359 4.3e-43 S Sel1-like repeats.
GMDDIDLE_01360 9.3e-63 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
GMDDIDLE_01361 0.0 tetP J Elongation factor G, domain IV
GMDDIDLE_01362 7.8e-28
GMDDIDLE_01363 1.9e-68 S Bacterial mobilisation protein (MobC)
GMDDIDLE_01364 2e-178 D nuclear chromosome segregation
GMDDIDLE_01365 6.2e-157 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
GMDDIDLE_01366 5.5e-53
GMDDIDLE_01367 7.7e-281 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
GMDDIDLE_01368 2.8e-79 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GMDDIDLE_01369 4.3e-169 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GMDDIDLE_01370 5.1e-198 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
GMDDIDLE_01371 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
GMDDIDLE_01372 0.0 FbpA K Fibronectin-binding protein
GMDDIDLE_01373 1.1e-66
GMDDIDLE_01374 3.5e-160 degV S EDD domain protein, DegV family
GMDDIDLE_01375 3.3e-304 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
GMDDIDLE_01376 1.8e-203 xerS L Belongs to the 'phage' integrase family
GMDDIDLE_01377 4.1e-67
GMDDIDLE_01378 8e-111 XK27_00160 S Domain of unknown function (DUF5052)
GMDDIDLE_01379 1.5e-211 M Glycosyl hydrolases family 25
GMDDIDLE_01380 2e-39 S Transglycosylase associated protein
GMDDIDLE_01381 2.7e-123 yoaK S Protein of unknown function (DUF1275)
GMDDIDLE_01382 4e-57 K Helix-turn-helix domain
GMDDIDLE_01383 1.1e-112 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GMDDIDLE_01384 7.3e-172 ppaC 3.6.1.1 C inorganic pyrophosphatase
GMDDIDLE_01385 4.3e-183 K Transcriptional regulator
GMDDIDLE_01386 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GMDDIDLE_01387 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GMDDIDLE_01388 3.5e-109 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
GMDDIDLE_01389 0.0 snf 2.7.11.1 KL domain protein
GMDDIDLE_01390 1e-18 snf 2.7.11.1 KL domain protein
GMDDIDLE_01391 1.5e-36
GMDDIDLE_01393 1e-104 pncA Q Isochorismatase family
GMDDIDLE_01394 4.9e-118
GMDDIDLE_01397 3.6e-63
GMDDIDLE_01398 3.4e-33
GMDDIDLE_01399 1.9e-115 rdgB 3.6.1.66, 5.1.1.3 F Ham1 family
GMDDIDLE_01400 3.4e-79
GMDDIDLE_01401 1e-242 cpdA S Calcineurin-like phosphoesterase
GMDDIDLE_01402 1.6e-218 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
GMDDIDLE_01403 1.1e-68 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
GMDDIDLE_01404 1e-107 ypsA S Belongs to the UPF0398 family
GMDDIDLE_01405 4.5e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
GMDDIDLE_01406 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
GMDDIDLE_01407 1.2e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GMDDIDLE_01408 1.3e-114 dnaD L DnaD domain protein
GMDDIDLE_01409 1.2e-260 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
GMDDIDLE_01410 2.4e-89 ypmB S Protein conserved in bacteria
GMDDIDLE_01411 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
GMDDIDLE_01412 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
GMDDIDLE_01413 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
GMDDIDLE_01414 2.2e-136 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
GMDDIDLE_01415 1.4e-178 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
GMDDIDLE_01416 2.1e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
GMDDIDLE_01417 8.2e-185 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
GMDDIDLE_01418 2.2e-116 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
GMDDIDLE_01419 1.4e-264 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
GMDDIDLE_01420 4.8e-168
GMDDIDLE_01421 1.8e-144
GMDDIDLE_01422 2.5e-103 lepB 3.4.21.89 U Belongs to the peptidase S26 family
GMDDIDLE_01423 3.8e-27
GMDDIDLE_01424 2.3e-145
GMDDIDLE_01425 1.7e-137
GMDDIDLE_01426 7e-142
GMDDIDLE_01427 2.1e-123 skfE V ATPases associated with a variety of cellular activities
GMDDIDLE_01428 4.7e-61 yvoA_1 K Transcriptional regulator, GntR family
GMDDIDLE_01429 1.8e-242 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
GMDDIDLE_01430 5e-153 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
GMDDIDLE_01431 2.4e-124 trmK 2.1.1.217 S SAM-dependent methyltransferase
GMDDIDLE_01432 4.8e-81 mutT 3.6.1.55 F NUDIX domain
GMDDIDLE_01433 8e-128 S Peptidase family M23
GMDDIDLE_01434 9.9e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
GMDDIDLE_01435 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
GMDDIDLE_01436 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
GMDDIDLE_01437 4.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
GMDDIDLE_01438 1.1e-136 recO L Involved in DNA repair and RecF pathway recombination
GMDDIDLE_01439 5.6e-220 L transposase, IS605 OrfB family
GMDDIDLE_01440 2.9e-201 L Transposase
GMDDIDLE_01441 3.7e-27 L Transposase
GMDDIDLE_01442 2e-42 S RelB antitoxin
GMDDIDLE_01443 3.8e-53
GMDDIDLE_01444 2.3e-218 KQ helix_turn_helix, mercury resistance
GMDDIDLE_01445 8.3e-209 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
GMDDIDLE_01446 1.1e-161 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
GMDDIDLE_01447 3.7e-116 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
GMDDIDLE_01448 2.1e-177 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
GMDDIDLE_01451 9.4e-15 U Preprotein translocase subunit SecB
GMDDIDLE_01452 5.7e-62
GMDDIDLE_01453 4.9e-52
GMDDIDLE_01454 8e-49 L Transposase
GMDDIDLE_01455 9.7e-193 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
GMDDIDLE_01456 2e-70 S Iron-sulphur cluster biosynthesis
GMDDIDLE_01457 5.6e-195 ybiR P Citrate transporter
GMDDIDLE_01458 3.9e-96 lemA S LemA family
GMDDIDLE_01459 2.6e-158 htpX O Belongs to the peptidase M48B family
GMDDIDLE_01460 2.1e-83
GMDDIDLE_01461 2.9e-76 M LysM domain
GMDDIDLE_01463 4.1e-87
GMDDIDLE_01464 1.2e-104 K Helix-turn-helix domain
GMDDIDLE_01465 2.3e-173 K helix_turn_helix, arabinose operon control protein
GMDDIDLE_01466 9.7e-250 cbiO1 S ABC transporter, ATP-binding protein
GMDDIDLE_01467 3.6e-77 P Cobalt transport protein
GMDDIDLE_01468 2.1e-176 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
GMDDIDLE_01469 3.2e-103 G Peptidase_C39 like family
GMDDIDLE_01470 1e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GMDDIDLE_01471 3.3e-151 htrA 3.4.21.107 O serine protease
GMDDIDLE_01472 8.2e-148 vicX 3.1.26.11 S domain protein
GMDDIDLE_01473 3.4e-149 yycI S YycH protein
GMDDIDLE_01474 3.7e-257 yycH S YycH protein
GMDDIDLE_01475 2.2e-305 vicK 2.7.13.3 T Histidine kinase
GMDDIDLE_01476 4.8e-131 K response regulator
GMDDIDLE_01478 1.9e-33
GMDDIDLE_01480 1.4e-149 arbV 2.3.1.51 I Acyl-transferase
GMDDIDLE_01481 1.2e-157 arbx M Glycosyl transferase family 8
GMDDIDLE_01482 4.5e-185 arbY M Glycosyl transferase family 8
GMDDIDLE_01483 1.6e-182 arbY M Glycosyl transferase family 8
GMDDIDLE_01484 4.6e-168 arbZ I Phosphate acyltransferases
GMDDIDLE_01485 1.4e-36 S Cytochrome B5
GMDDIDLE_01486 9.5e-82 XK27_04435 3.5.4.5 J FR47-like protein
GMDDIDLE_01487 2.1e-45 S PFAM Archaeal ATPase
GMDDIDLE_01489 1.3e-58 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
GMDDIDLE_01490 4.5e-45
GMDDIDLE_01492 5.5e-30
GMDDIDLE_01493 1.1e-40 S Protein of unknown function (DUF2922)
GMDDIDLE_01494 3.4e-141 S SLAP domain
GMDDIDLE_01495 1.1e-190 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
GMDDIDLE_01496 7.8e-73
GMDDIDLE_01498 7.2e-86 K DNA-templated transcription, initiation
GMDDIDLE_01499 1.5e-25
GMDDIDLE_01500 3e-148 3.6.4.12 S PD-(D/E)XK nuclease family transposase
GMDDIDLE_01501 8.2e-149 S SLAP domain
GMDDIDLE_01502 8.8e-81 L transposase, IS605 OrfB family
GMDDIDLE_01503 9.4e-74 K Copper transport repressor CopY TcrY
GMDDIDLE_01504 0.0 copB 3.6.3.4 P P-type ATPase
GMDDIDLE_01506 5.2e-97 cadD P Cadmium resistance transporter
GMDDIDLE_01507 2.4e-43 L transposase activity
GMDDIDLE_01508 9.2e-215 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
GMDDIDLE_01509 8.7e-209 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
GMDDIDLE_01510 0.0 yjbQ P TrkA C-terminal domain protein
GMDDIDLE_01511 3.6e-117 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GMDDIDLE_01512 2.2e-179 S Oxidoreductase family, NAD-binding Rossmann fold
GMDDIDLE_01513 9.5e-144
GMDDIDLE_01514 2.3e-136
GMDDIDLE_01515 5e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GMDDIDLE_01516 4.9e-99 G Aldose 1-epimerase
GMDDIDLE_01517 3e-201 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GMDDIDLE_01518 7.3e-112 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
GMDDIDLE_01519 0.0 XK27_08315 M Sulfatase
GMDDIDLE_01520 1.6e-243 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GMDDIDLE_01521 2.7e-74 L Putative transposase DNA-binding domain
GMDDIDLE_01522 4.9e-90 ymdB S Macro domain protein
GMDDIDLE_01523 2.3e-09
GMDDIDLE_01524 6.3e-28
GMDDIDLE_01526 7.3e-67 K Helix-turn-helix XRE-family like proteins
GMDDIDLE_01527 3.3e-147 malG P ABC transporter permease
GMDDIDLE_01528 3.1e-248 malF P Binding-protein-dependent transport system inner membrane component
GMDDIDLE_01529 1.3e-213 malE G Bacterial extracellular solute-binding protein
GMDDIDLE_01530 4.7e-210 msmX P Belongs to the ABC transporter superfamily
GMDDIDLE_01531 1.4e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
GMDDIDLE_01532 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
GMDDIDLE_01533 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
GMDDIDLE_01534 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
GMDDIDLE_01535 4.8e-78 S PAS domain
GMDDIDLE_01536 3.7e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GMDDIDLE_01537 8.2e-179 yvdE K helix_turn _helix lactose operon repressor
GMDDIDLE_01538 6.3e-145 ptp2 3.1.3.48 T Tyrosine phosphatase family
GMDDIDLE_01539 1.7e-292 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
GMDDIDLE_01540 9.6e-152 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
GMDDIDLE_01541 8.6e-21
GMDDIDLE_01542 8.8e-131 K Helix-turn-helix XRE-family like proteins
GMDDIDLE_01543 1.2e-70 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
GMDDIDLE_01544 7.9e-227 N Uncharacterized conserved protein (DUF2075)
GMDDIDLE_01545 6.2e-205 pbpX1 V Beta-lactamase
GMDDIDLE_01546 0.0 L Helicase C-terminal domain protein
GMDDIDLE_01547 5.1e-273 E amino acid
GMDDIDLE_01548 6.3e-159 xth 3.1.11.2 L exodeoxyribonuclease III
GMDDIDLE_01551 1.4e-192 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GMDDIDLE_01552 7.4e-152 3.1.3.102, 3.1.3.104 S haloacid dehalogenase-like hydrolase
GMDDIDLE_01553 0.0 tetP J elongation factor G
GMDDIDLE_01554 1.4e-158 yvgN C Aldo keto reductase
GMDDIDLE_01555 2e-147 P CorA-like Mg2+ transporter protein
GMDDIDLE_01556 3.5e-134 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GMDDIDLE_01557 9.8e-175 ABC-SBP S ABC transporter
GMDDIDLE_01558 7.4e-121 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
GMDDIDLE_01559 3.1e-136 XK27_08845 S ABC transporter, ATP-binding protein
GMDDIDLE_01560 1.2e-20
GMDDIDLE_01561 2.2e-54
GMDDIDLE_01562 1.4e-205 purD 6.3.4.13 F Belongs to the GARS family
GMDDIDLE_01563 1.6e-39 darA C Flavodoxin
GMDDIDLE_01564 2e-139 qmcA O prohibitin homologues
GMDDIDLE_01565 4.3e-52 L RelB antitoxin
GMDDIDLE_01566 7.9e-193 S Bacteriocin helveticin-J
GMDDIDLE_01567 5.1e-162 M Peptidase family M1 domain
GMDDIDLE_01568 1.9e-112 M Peptidase family M1 domain
GMDDIDLE_01569 6.7e-113 L Resolvase, N-terminal
GMDDIDLE_01570 1.2e-221 L Putative transposase DNA-binding domain
GMDDIDLE_01571 1.3e-174 S SLAP domain
GMDDIDLE_01572 1.3e-235 mepA V MATE efflux family protein
GMDDIDLE_01573 1.2e-249 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
GMDDIDLE_01574 1.7e-122 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GMDDIDLE_01575 2.8e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
GMDDIDLE_01576 1.3e-13 S Protein of unknown function (DUF805)
GMDDIDLE_01577 3.3e-126 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
GMDDIDLE_01578 1.9e-220 ecsB U ABC transporter
GMDDIDLE_01579 5.7e-135 ecsA V ABC transporter, ATP-binding protein
GMDDIDLE_01580 8.3e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
GMDDIDLE_01581 5.1e-25
GMDDIDLE_01582 8.9e-151 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
GMDDIDLE_01583 1.9e-72 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
GMDDIDLE_01584 7.3e-267
GMDDIDLE_01585 2.4e-51 S Domain of unknown function DUF1829
GMDDIDLE_01586 5.9e-24
GMDDIDLE_01587 1.4e-186 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
GMDDIDLE_01588 0.0 L AAA domain
GMDDIDLE_01589 1.9e-233 yhaO L Ser Thr phosphatase family protein
GMDDIDLE_01590 7.2e-56 yheA S Belongs to the UPF0342 family
GMDDIDLE_01591 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
GMDDIDLE_01592 6.5e-151 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GMDDIDLE_01593 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
GMDDIDLE_01594 3.6e-111 G Phosphoglycerate mutase family
GMDDIDLE_01595 1.3e-139 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GMDDIDLE_01596 3.9e-78 U The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GMDDIDLE_01597 5.2e-156 U The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GMDDIDLE_01598 1.1e-269 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GMDDIDLE_01599 1.3e-54
GMDDIDLE_01600 5.5e-147 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
GMDDIDLE_01601 7.7e-154 yisY 1.11.1.10 S Alpha/beta hydrolase family
GMDDIDLE_01602 3.1e-124 mdcG 2.7.7.66 H Phosphoribosyl-dephospho-CoA transferase MdcG
GMDDIDLE_01603 2.8e-307 mdcD 4.1.1.87 I Malonate decarboxylase gamma subunit (MdcE)
GMDDIDLE_01604 7.1e-52 mdcC C Malonate decarboxylase delta subunit (MdcD)
GMDDIDLE_01605 0.0 mdcA 2.3.1.187 I Malonate decarboxylase, alpha subunit, transporter
GMDDIDLE_01606 3.3e-169 mdcH 2.3.1.39 I Acyl transferase domain
GMDDIDLE_01607 1.2e-160 K Transcriptional regulator, LysR family
GMDDIDLE_01608 6.5e-220 I transferase activity, transferring acyl groups other than amino-acyl groups
GMDDIDLE_01609 3.1e-168 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GMDDIDLE_01610 1.6e-84 S GyrI-like small molecule binding domain
GMDDIDLE_01611 9.2e-206 S PFAM Archaeal ATPase
GMDDIDLE_01612 6.4e-235 L Transposase
GMDDIDLE_01613 7.6e-46
GMDDIDLE_01614 2.6e-37
GMDDIDLE_01615 7.2e-92 3.6.1.55 L NUDIX domain
GMDDIDLE_01616 1.8e-170 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
GMDDIDLE_01617 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
GMDDIDLE_01618 2.3e-98 M ErfK YbiS YcfS YnhG
GMDDIDLE_01619 7.4e-155 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GMDDIDLE_01620 4.2e-242 dacA 3.4.16.4 M Belongs to the peptidase S11 family
GMDDIDLE_01622 1.5e-44 pspC KT PspC domain
GMDDIDLE_01623 8e-299 ytgP S Polysaccharide biosynthesis protein
GMDDIDLE_01624 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
GMDDIDLE_01625 4.9e-122 3.6.1.27 I Acid phosphatase homologues
GMDDIDLE_01626 3.7e-168 K LysR substrate binding domain
GMDDIDLE_01627 2e-94 3.6.4.12 S PD-(D/E)XK nuclease family transposase
GMDDIDLE_01628 4.1e-231 ndh 1.6.99.3 C NADH dehydrogenase
GMDDIDLE_01629 3e-162 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
GMDDIDLE_01630 5.5e-178 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GMDDIDLE_01631 1.4e-127 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
GMDDIDLE_01632 8.3e-270 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
GMDDIDLE_01633 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
GMDDIDLE_01634 3.3e-178 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
GMDDIDLE_01635 2.3e-273 cydA 1.10.3.14 C ubiquinol oxidase
GMDDIDLE_01636 4.3e-147 ybbH_2 K rpiR family
GMDDIDLE_01637 1.3e-198 S Bacterial protein of unknown function (DUF871)
GMDDIDLE_01638 1.3e-154 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
GMDDIDLE_01639 0.0 sacX 2.7.1.208, 2.7.1.211 G phosphotransferase system
GMDDIDLE_01640 1.2e-261 qacA EGP Major facilitator Superfamily
GMDDIDLE_01641 1.6e-219 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GMDDIDLE_01644 5.7e-166 psaA P Belongs to the bacterial solute-binding protein 9 family
GMDDIDLE_01647 0.0 oppA3 E ABC transporter, substratebinding protein
GMDDIDLE_01648 9.9e-62 ypaA S Protein of unknown function (DUF1304)
GMDDIDLE_01649 1.5e-101 S Peptidase propeptide and YPEB domain
GMDDIDLE_01650 4.4e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GMDDIDLE_01651 4.6e-171 coaA 2.7.1.33 F Pantothenic acid kinase
GMDDIDLE_01652 4.9e-99 E GDSL-like Lipase/Acylhydrolase
GMDDIDLE_01653 4.4e-74 yjcF S Acetyltransferase (GNAT) domain
GMDDIDLE_01654 1.7e-145 aatB ET ABC transporter substrate-binding protein
GMDDIDLE_01655 3.2e-107 glnQ 3.6.3.21 E ABC transporter
GMDDIDLE_01656 4.2e-110 glnP P ABC transporter permease
GMDDIDLE_01657 0.0 helD 3.6.4.12 L DNA helicase
GMDDIDLE_01658 5.6e-118 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
GMDDIDLE_01659 1.4e-126 pgm3 G Phosphoglycerate mutase family
GMDDIDLE_01660 1.4e-242 S response to antibiotic
GMDDIDLE_01661 1.9e-124
GMDDIDLE_01662 0.0 3.6.3.8 P P-type ATPase
GMDDIDLE_01663 8.7e-66 2.7.1.191 G PTS system fructose IIA component
GMDDIDLE_01664 3.6e-42
GMDDIDLE_01665 7.7e-09
GMDDIDLE_01666 4.2e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
GMDDIDLE_01667 7e-136 glvR K Helix-turn-helix domain, rpiR family
GMDDIDLE_01668 2.7e-268 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
GMDDIDLE_01669 1.1e-150
GMDDIDLE_01670 8.6e-24
GMDDIDLE_01671 1.5e-92 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
GMDDIDLE_01672 2e-157 S Archaea bacterial proteins of unknown function
GMDDIDLE_01673 8e-105 3.2.2.20 K acetyltransferase
GMDDIDLE_01675 3.4e-30 pac 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
GMDDIDLE_01676 5.3e-38 pac 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
GMDDIDLE_01677 9.1e-15 pac 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
GMDDIDLE_01678 0.0 O Belongs to the peptidase S8 family
GMDDIDLE_01679 4.4e-50 bamA GM domain, Protein
GMDDIDLE_01680 7.6e-155 L An automated process has identified a potential problem with this gene model
GMDDIDLE_01682 1.6e-129 L PFAM transposase IS116 IS110 IS902
GMDDIDLE_01683 3.2e-197 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
GMDDIDLE_01684 2.3e-59 hxlR K Transcriptional regulator, HxlR family
GMDDIDLE_01685 1.2e-19 yjdF S Protein of unknown function (DUF2992)
GMDDIDLE_01686 3e-56 ps115 K Helix-turn-helix XRE-family like proteins
GMDDIDLE_01689 1.7e-135 S SLAP domain
GMDDIDLE_01690 2e-202 L COG2826 Transposase and inactivated derivatives, IS30 family
GMDDIDLE_01691 9.8e-127 S ABC-2 family transporter protein
GMDDIDLE_01692 3e-170 bcrA V ABC transporter
GMDDIDLE_01693 2.7e-106 K Psort location CytoplasmicMembrane, score
GMDDIDLE_01694 1.3e-30 S Filamentation induced by cAMP protein fic
GMDDIDLE_01695 4.4e-58 K Psort location Cytoplasmic, score
GMDDIDLE_01696 9.3e-158 metQ1 P Belongs to the nlpA lipoprotein family
GMDDIDLE_01697 4.3e-169 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
GMDDIDLE_01698 4.9e-63 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GMDDIDLE_01699 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GMDDIDLE_01700 7.1e-200 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GMDDIDLE_01701 2.9e-162 cjaA ET ABC transporter substrate-binding protein
GMDDIDLE_01702 4.8e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GMDDIDLE_01703 2.8e-117 P ABC transporter permease
GMDDIDLE_01704 4.4e-110 papP P ABC transporter, permease protein
GMDDIDLE_01706 4.5e-58 yodB K Transcriptional regulator, HxlR family
GMDDIDLE_01707 1.4e-136 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GMDDIDLE_01708 2.9e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
GMDDIDLE_01709 4.6e-161 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GMDDIDLE_01710 1.5e-72 S Aminoacyl-tRNA editing domain
GMDDIDLE_01711 1.2e-54 S Abi-like protein
GMDDIDLE_01712 3.6e-224 S SLAP domain
GMDDIDLE_01713 3.1e-50 S CAAX protease self-immunity
GMDDIDLE_01714 8.5e-17
GMDDIDLE_01715 1.3e-277 arlS 2.7.13.3 T Histidine kinase
GMDDIDLE_01716 1.2e-126 K response regulator
GMDDIDLE_01717 2.1e-97 yceD S Uncharacterized ACR, COG1399
GMDDIDLE_01718 1.2e-216 ylbM S Belongs to the UPF0348 family
GMDDIDLE_01719 5.3e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
GMDDIDLE_01720 4.3e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
GMDDIDLE_01721 2.6e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GMDDIDLE_01722 4.4e-200 yqeH S Ribosome biogenesis GTPase YqeH
GMDDIDLE_01723 4.2e-84 yqeG S HAD phosphatase, family IIIA
GMDDIDLE_01724 9.2e-201 tnpB L Putative transposase DNA-binding domain
GMDDIDLE_01725 5.6e-154 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
GMDDIDLE_01726 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GMDDIDLE_01727 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
GMDDIDLE_01728 3.2e-72 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GMDDIDLE_01729 8.2e-49 yyaR K Acetyltransferase (GNAT) domain
GMDDIDLE_01730 2e-106 S domain protein
GMDDIDLE_01731 3.3e-83 V ABC transporter
GMDDIDLE_01732 4.1e-48 V ABC transporter
GMDDIDLE_01733 9.2e-69 S Protein of unknown function (DUF3021)
GMDDIDLE_01734 1.4e-72 K LytTr DNA-binding domain
GMDDIDLE_01735 1.1e-32 hxlR K HxlR-like helix-turn-helix
GMDDIDLE_01736 2e-236 L transposase, IS605 OrfB family
GMDDIDLE_01737 9.4e-97 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
GMDDIDLE_01738 1e-95
GMDDIDLE_01739 7.8e-42 S Domain of unknown function (DUF4393)
GMDDIDLE_01740 0.0 hsdR 3.1.21.3 L Type I restriction enzyme R protein N terminus (HSDR_N)
GMDDIDLE_01741 1.2e-288 hsdM 2.1.1.72 V type I restriction-modification system
GMDDIDLE_01742 8.7e-119 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
GMDDIDLE_01743 1.9e-40
GMDDIDLE_01744 1.9e-74
GMDDIDLE_01745 1.5e-164 S Protein of unknown function (DUF2974)
GMDDIDLE_01746 4.7e-109 glnP P ABC transporter permease
GMDDIDLE_01747 9.7e-91 gluC P ABC transporter permease
GMDDIDLE_01748 2e-149 glnH ET ABC transporter substrate-binding protein
GMDDIDLE_01749 1.9e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GMDDIDLE_01750 3.6e-114 udk 2.7.1.48 F Zeta toxin
GMDDIDLE_01751 6.3e-29 S Motility quorum-sensing regulator, toxin of MqsA
GMDDIDLE_01752 1.3e-53 ps301 K sequence-specific DNA binding
GMDDIDLE_01753 3e-254 G MFS/sugar transport protein
GMDDIDLE_01754 3.8e-102 S ABC-type cobalt transport system, permease component
GMDDIDLE_01755 0.0 V ABC transporter transmembrane region
GMDDIDLE_01756 1.7e-310 XK27_09600 V ABC transporter, ATP-binding protein
GMDDIDLE_01757 1.4e-80 K Transcriptional regulator, MarR family
GMDDIDLE_01758 6.4e-148 glnH ET ABC transporter
GMDDIDLE_01759 4.9e-130 yfeJ 6.3.5.2 F glutamine amidotransferase
GMDDIDLE_01760 9.5e-242 steT E amino acid
GMDDIDLE_01761 8e-241 steT E amino acid
GMDDIDLE_01762 6.1e-151
GMDDIDLE_01763 1.3e-173 S Aldo keto reductase
GMDDIDLE_01764 7.6e-310 ybiT S ABC transporter, ATP-binding protein
GMDDIDLE_01765 6e-210 pepA E M42 glutamyl aminopeptidase
GMDDIDLE_01766 2.6e-103
GMDDIDLE_01767 2.4e-136
GMDDIDLE_01768 4e-215 mdtG EGP Major facilitator Superfamily
GMDDIDLE_01769 3.8e-260 emrY EGP Major facilitator Superfamily
GMDDIDLE_01770 1.5e-36
GMDDIDLE_01772 3.4e-123 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
GMDDIDLE_01773 2.5e-86 K GNAT family
GMDDIDLE_01774 1.3e-55 XK27_00915 C Luciferase-like monooxygenase
GMDDIDLE_01775 1.3e-131 XK27_00915 C Luciferase-like monooxygenase
GMDDIDLE_01776 1.3e-150 lmrB EGP Major facilitator Superfamily
GMDDIDLE_01777 5.6e-34 rmaI K Transcriptional regulator
GMDDIDLE_01779 2.6e-08 K Bacterial regulatory helix-turn-helix protein, lysR family
GMDDIDLE_01781 4.5e-88 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
GMDDIDLE_01782 0.0 L Plasmid pRiA4b ORF-3-like protein
GMDDIDLE_01783 3.9e-246 brnQ U Component of the transport system for branched-chain amino acids
GMDDIDLE_01784 1.1e-120 3.6.1.55 F NUDIX domain
GMDDIDLE_01785 4e-76 ltrA S Bacterial low temperature requirement A protein (LtrA)
GMDDIDLE_01786 3.3e-84 S Protein of unknown function (DUF1211)
GMDDIDLE_01787 5.7e-121 lsa S ABC transporter
GMDDIDLE_01788 4.6e-202 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GMDDIDLE_01789 6.9e-107 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
GMDDIDLE_01790 6.3e-229 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
GMDDIDLE_01791 1.9e-80 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
GMDDIDLE_01792 3.3e-130 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
GMDDIDLE_01793 5.8e-13 L Transposase and inactivated derivatives, IS30 family
GMDDIDLE_01794 7e-99 L Transposase and inactivated derivatives, IS30 family
GMDDIDLE_01795 7.2e-203 G Glycosyl hydrolases family 8
GMDDIDLE_01796 1.6e-246 ydaM M Glycosyl transferase
GMDDIDLE_01798 4.2e-150
GMDDIDLE_01799 3.5e-67 M Peptidase family M1 domain
GMDDIDLE_01800 1.4e-23
GMDDIDLE_01801 2.7e-63 L PFAM IS66 Orf2 family protein
GMDDIDLE_01802 8.7e-34 S Transposase C of IS166 homeodomain
GMDDIDLE_01803 7.2e-53 L Transposase IS66 family
GMDDIDLE_01804 5.9e-24
GMDDIDLE_01805 2.4e-51 S Domain of unknown function DUF1829
GMDDIDLE_01806 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GMDDIDLE_01807 4.5e-157 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
GMDDIDLE_01808 2.5e-104 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GMDDIDLE_01809 4.6e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GMDDIDLE_01810 3e-251 dnaB L Replication initiation and membrane attachment
GMDDIDLE_01811 4.8e-168 dnaI L Primosomal protein DnaI
GMDDIDLE_01812 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GMDDIDLE_01813 1.7e-85
GMDDIDLE_01814 3.3e-175 S Domain of unknown function (DUF389)
GMDDIDLE_01815 1.3e-62 L COG2826 Transposase and inactivated derivatives, IS30 family
GMDDIDLE_01816 1e-72 L COG2826 Transposase and inactivated derivatives, IS30 family
GMDDIDLE_01817 9.6e-41 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GMDDIDLE_01818 2.7e-40 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GMDDIDLE_01819 7.7e-39 S Aldo keto reductase
GMDDIDLE_01820 6.6e-130 4.2.1.156, 4.2.1.42 M Enolase C-terminal domain-like
GMDDIDLE_01821 1.7e-88 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
GMDDIDLE_01822 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
GMDDIDLE_01823 8.3e-233 cycA E Amino acid permease
GMDDIDLE_01824 6e-08 S oxidoreductase activity
GMDDIDLE_01825 2.2e-100 S oxidoreductase activity
GMDDIDLE_01826 8.8e-184 L Transposase
GMDDIDLE_01827 4.8e-118 L Transposase
GMDDIDLE_01828 7.7e-56 L Transposase
GMDDIDLE_01829 8.3e-75 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GMDDIDLE_01830 4.1e-156 K Transcriptional regulator
GMDDIDLE_01831 1.7e-63 manO S Domain of unknown function (DUF956)
GMDDIDLE_01832 1e-173 manN G system, mannose fructose sorbose family IID component
GMDDIDLE_01833 1.7e-129 manY G PTS system
GMDDIDLE_01834 1.6e-185 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
GMDDIDLE_01837 1.1e-89 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GMDDIDLE_01838 2.9e-238 pyrP F Permease
GMDDIDLE_01839 4.7e-293 K Putative DNA-binding domain
GMDDIDLE_01840 9.3e-35
GMDDIDLE_01841 1.4e-158 S reductase
GMDDIDLE_01842 6.3e-46
GMDDIDLE_01843 6.3e-208 V ABC transporter transmembrane region
GMDDIDLE_01844 8.3e-95 K Helix-turn-helix XRE-family like proteins
GMDDIDLE_01845 5.8e-85 2.3.1.128 K Acetyltransferase (GNAT) domain
GMDDIDLE_01846 4.8e-27 E Zn peptidase
GMDDIDLE_01847 1.1e-14 K Helix-turn-helix XRE-family like proteins
GMDDIDLE_01848 1.9e-20
GMDDIDLE_01849 9.4e-70 4.2.1.53 S Myosin-crossreactive antigen
GMDDIDLE_01850 1.3e-111 L Resolvase, N terminal domain
GMDDIDLE_01851 1.1e-253 L Probable transposase
GMDDIDLE_01852 2e-286 V ABC-type multidrug transport system, ATPase and permease components
GMDDIDLE_01853 9.5e-281 V ABC-type multidrug transport system, ATPase and permease components
GMDDIDLE_01854 7.1e-74
GMDDIDLE_01855 5.2e-21 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
GMDDIDLE_01856 8.4e-70 hipB K sequence-specific DNA binding
GMDDIDLE_01857 7.7e-40 S SnoaL-like domain
GMDDIDLE_01858 0.0 L PLD-like domain
GMDDIDLE_01859 8.2e-102 pgm3 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
GMDDIDLE_01860 2.3e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
GMDDIDLE_01861 7.3e-283 thrC 4.2.3.1 E Threonine synthase
GMDDIDLE_01862 5.6e-220 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
GMDDIDLE_01863 2.5e-158 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
GMDDIDLE_01864 2.1e-117
GMDDIDLE_01865 3.9e-159 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GMDDIDLE_01866 6.3e-77
GMDDIDLE_01867 1.2e-105 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GMDDIDLE_01868 2e-117 S Peptidase family M23
GMDDIDLE_01869 1.6e-102
GMDDIDLE_01870 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
GMDDIDLE_01871 1e-34 copZ C Heavy-metal-associated domain
GMDDIDLE_01872 7.7e-97 dps P Belongs to the Dps family
GMDDIDLE_01873 2.4e-46 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
GMDDIDLE_01874 1.3e-45 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
GMDDIDLE_01876 1.1e-46
GMDDIDLE_01877 0.0 cas3 L CRISPR-associated helicase cas3
GMDDIDLE_01878 0.0 casA L the current gene model (or a revised gene model) may contain a frame shift
GMDDIDLE_01879 8.8e-110 casB S CRISPR-associated protein Cse2 (CRISPR_cse2)
GMDDIDLE_01880 4.9e-199 casC L CT1975-like protein
GMDDIDLE_01881 2.6e-132 casD S CRISPR-associated protein (Cas_Cas5)
GMDDIDLE_01882 1.3e-122 casE S CRISPR_assoc
GMDDIDLE_01883 3.9e-173 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
GMDDIDLE_01884 1.4e-164 cas2 2.7.7.7 L CRISPR-associated protein (Cas_Cas2CT1978)
GMDDIDLE_01885 1.2e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
GMDDIDLE_01886 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
GMDDIDLE_01887 1.6e-71 yqeY S YqeY-like protein
GMDDIDLE_01888 1.1e-175 phoH T phosphate starvation-inducible protein PhoH
GMDDIDLE_01889 1.8e-95 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GMDDIDLE_01890 2.1e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GMDDIDLE_01891 1.2e-205 L COG3547 Transposase and inactivated derivatives
GMDDIDLE_01892 1.4e-23 L Transposase
GMDDIDLE_01893 1.3e-169 S Bacterial protein of unknown function (DUF871)
GMDDIDLE_01895 6.5e-34 ybhL S Belongs to the BI1 family
GMDDIDLE_01896 1.5e-12 ybhL S Belongs to the BI1 family
GMDDIDLE_01898 5.4e-09 S Metal binding domain of Ada
GMDDIDLE_01899 0.0 mgtA 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
GMDDIDLE_01900 6.9e-137 lysR5 K LysR substrate binding domain
GMDDIDLE_01901 4.7e-235 arcA 3.5.3.6 E Arginine
GMDDIDLE_01902 2.3e-66 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GMDDIDLE_01903 1.2e-47 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GMDDIDLE_01904 1.1e-107 argF 2.1.3.3, 2.7.2.2 E Belongs to the carbamate kinase family
GMDDIDLE_01905 1.7e-96 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
GMDDIDLE_01906 3.3e-222 S Sterol carrier protein domain
GMDDIDLE_01907 1e-20
GMDDIDLE_01908 2e-109 K LysR substrate binding domain
GMDDIDLE_01909 9e-98
GMDDIDLE_01910 2.1e-117 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
GMDDIDLE_01911 2.1e-95
GMDDIDLE_01912 1e-252 3.2.1.18 GH33 M Rib/alpha-like repeat
GMDDIDLE_01913 4.4e-244 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
GMDDIDLE_01914 8.4e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GMDDIDLE_01915 3.4e-197 yjeM E Amino Acid
GMDDIDLE_01916 7.4e-72 yjeM E Amino Acid
GMDDIDLE_01917 8.4e-188 S SLAP domain
GMDDIDLE_01918 1.1e-89 S SLAP domain
GMDDIDLE_01919 1.2e-137 S Fic/DOC family
GMDDIDLE_01920 1.4e-286
GMDDIDLE_01921 2.2e-78
GMDDIDLE_01922 4e-95 S Protein of unknown function (DUF805)
GMDDIDLE_01923 6.6e-69 O OsmC-like protein
GMDDIDLE_01924 2.1e-208 EGP Major facilitator Superfamily
GMDDIDLE_01925 4.7e-222 sptS 2.7.13.3 T Histidine kinase
GMDDIDLE_01926 1.6e-23 K response regulator
GMDDIDLE_01927 5.7e-148 L Putative transposase DNA-binding domain
GMDDIDLE_01928 8.3e-66 L Resolvase, N-terminal
GMDDIDLE_01929 1.4e-72 K response regulator
GMDDIDLE_01930 1.9e-112 2.7.6.5 T Region found in RelA / SpoT proteins
GMDDIDLE_01931 5.1e-281 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
GMDDIDLE_01932 0.0 rafA 3.2.1.22 G alpha-galactosidase
GMDDIDLE_01933 2.8e-210 msmX P Belongs to the ABC transporter superfamily
GMDDIDLE_01934 5.2e-153 msmG P Binding-protein-dependent transport system inner membrane component
GMDDIDLE_01935 4e-156 msmF P Binding-protein-dependent transport system inner membrane component
GMDDIDLE_01936 3.2e-239 msmE G Bacterial extracellular solute-binding protein
GMDDIDLE_01937 4.7e-174 scrR K Periplasmic binding protein domain
GMDDIDLE_01938 5.5e-36
GMDDIDLE_01939 1.7e-195 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
GMDDIDLE_01940 6.3e-287 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
GMDDIDLE_01941 6.2e-221 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
GMDDIDLE_01942 0.0 lacZ 3.2.1.23 G -beta-galactosidase
GMDDIDLE_01943 0.0 lacS G Transporter
GMDDIDLE_01944 2.5e-186 lacR K Transcriptional regulator
GMDDIDLE_01945 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
GMDDIDLE_01946 3.1e-186 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
GMDDIDLE_01947 4.1e-189 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
GMDDIDLE_01948 7e-127 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
GMDDIDLE_01949 6e-26 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
GMDDIDLE_01950 9.8e-106 K Transcriptional regulator, AbiEi antitoxin
GMDDIDLE_01951 1.2e-149 K Periplasmic binding protein-like domain
GMDDIDLE_01979 1.4e-223 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
GMDDIDLE_01980 2.6e-202 cpoA GT4 M Glycosyltransferase, group 1 family protein
GMDDIDLE_01981 1.5e-178 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
GMDDIDLE_01982 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GMDDIDLE_01983 1.7e-29 secG U Preprotein translocase
GMDDIDLE_01984 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
GMDDIDLE_01985 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
GMDDIDLE_01986 3.4e-19 4.2.1.5 M Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
GMDDIDLE_01987 5.6e-61 EG COG COG2610 H gluconate symporter and related permeases
GMDDIDLE_01988 2.9e-129 IQ NAD dependent epimerase/dehydratase family
GMDDIDLE_01989 4.8e-257 L Transposase
GMDDIDLE_01990 5.4e-239 V ABC transporter transmembrane region
GMDDIDLE_01991 6.2e-76 yybA 2.3.1.57 K Transcriptional regulator
GMDDIDLE_01992 3.7e-96 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
GMDDIDLE_01993 9.2e-99 S Peptidase propeptide and YPEB domain
GMDDIDLE_01994 2.9e-88 S Peptidase propeptide and YPEB domain
GMDDIDLE_01995 1.5e-247 T GHKL domain
GMDDIDLE_01996 3.3e-132 T Transcriptional regulatory protein, C terminal
GMDDIDLE_01997 2.1e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
GMDDIDLE_01998 2.4e-279 V ABC transporter transmembrane region
GMDDIDLE_01999 1.1e-138 S PAS domain
GMDDIDLE_02000 2e-12
GMDDIDLE_02001 9e-141 pnuC H nicotinamide mononucleotide transporter
GMDDIDLE_02002 4.1e-72 S Protein of unknown function (DUF3290)
GMDDIDLE_02003 3e-116 yviA S Protein of unknown function (DUF421)
GMDDIDLE_02004 2.4e-158 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
GMDDIDLE_02005 9.4e-183 dnaQ 2.7.7.7 L EXOIII
GMDDIDLE_02006 1.9e-158 endA F DNA RNA non-specific endonuclease
GMDDIDLE_02007 1.8e-283 pipD E Dipeptidase
GMDDIDLE_02008 1.9e-203 malK P ATPases associated with a variety of cellular activities
GMDDIDLE_02009 7.3e-158 gtsB P ABC-type sugar transport systems, permease components
GMDDIDLE_02010 6.1e-146 gtsC P Binding-protein-dependent transport system inner membrane component
GMDDIDLE_02011 2.4e-258 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
GMDDIDLE_02012 5.1e-240 G Bacterial extracellular solute-binding protein
GMDDIDLE_02013 1.8e-154 corA P CorA-like Mg2+ transporter protein
GMDDIDLE_02014 1.1e-148 3.5.2.6 V Beta-lactamase enzyme family
GMDDIDLE_02015 2.3e-99 yobS K Bacterial regulatory proteins, tetR family
GMDDIDLE_02016 0.0 ydgH S MMPL family
GMDDIDLE_02018 1.3e-25 K Acetyltransferase (GNAT) domain
GMDDIDLE_02019 2e-162
GMDDIDLE_02020 1.9e-261 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
GMDDIDLE_02021 6.2e-93 F Nucleoside 2-deoxyribosyltransferase
GMDDIDLE_02022 1.5e-158 hipB K Helix-turn-helix
GMDDIDLE_02023 6.5e-153 I alpha/beta hydrolase fold
GMDDIDLE_02024 1.4e-110 yjbF S SNARE associated Golgi protein
GMDDIDLE_02025 8.3e-99 J Acetyltransferase (GNAT) domain
GMDDIDLE_02026 1.9e-247 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GMDDIDLE_02027 1.5e-80 UW LPXTG-motif cell wall anchor domain protein
GMDDIDLE_02028 9.6e-45 UW LPXTG-motif cell wall anchor domain protein
GMDDIDLE_02029 1.8e-164 UW LPXTG-motif cell wall anchor domain protein
GMDDIDLE_02030 1.2e-174 UW LPXTG-motif cell wall anchor domain protein
GMDDIDLE_02031 9.9e-160 oppA E ABC transporter substrate-binding protein
GMDDIDLE_02032 1.3e-38 oppA E ABC transporter substrate-binding protein
GMDDIDLE_02033 6.3e-95
GMDDIDLE_02034 3.1e-17 L Transposase
GMDDIDLE_02035 7.9e-45 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
GMDDIDLE_02036 1.4e-144 srlE 2.7.1.198 G Sorbitol phosphotransferase enzyme II N-terminus
GMDDIDLE_02037 8.3e-91 srlA G PTS system enzyme II sorbitol-specific factor
GMDDIDLE_02038 3.2e-57 gutM K Glucitol operon activator protein (GutM)
GMDDIDLE_02039 1.4e-82 srlM 2.7.1.200, 2.7.1.202 GKT Mga helix-turn-helix domain
GMDDIDLE_02040 6.2e-114 K Transcriptional regulator
GMDDIDLE_02041 1.2e-291 M Exporter of polyketide antibiotics
GMDDIDLE_02042 3.1e-167 yjjC V ABC transporter
GMDDIDLE_02043 1.5e-227 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
GMDDIDLE_02044 1.9e-112 plsC 2.3.1.51 I Acyltransferase
GMDDIDLE_02045 4.3e-189 yabB 2.1.1.223 L Methyltransferase small domain
GMDDIDLE_02046 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
GMDDIDLE_02047 8.3e-185 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GMDDIDLE_02048 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
GMDDIDLE_02049 5.3e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
GMDDIDLE_02050 5.4e-138 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GMDDIDLE_02051 9.6e-136 cdsA 2.7.7.41 I Belongs to the CDS family
GMDDIDLE_02052 7.5e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
GMDDIDLE_02053 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
GMDDIDLE_02054 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GMDDIDLE_02055 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
GMDDIDLE_02056 1.7e-197 nusA K Participates in both transcription termination and antitermination
GMDDIDLE_02057 8.8e-47 ylxR K Protein of unknown function (DUF448)
GMDDIDLE_02058 3.2e-47 rplGA J ribosomal protein
GMDDIDLE_02059 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GMDDIDLE_02060 3e-60 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GMDDIDLE_02061 9.8e-158 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GMDDIDLE_02062 9.9e-177 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
GMDDIDLE_02063 4.5e-194 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
GMDDIDLE_02064 8e-68 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GMDDIDLE_02065 0.0 dnaK O Heat shock 70 kDa protein
GMDDIDLE_02066 5.8e-203 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
GMDDIDLE_02067 9.3e-80 apfA 2.7.7.72, 3.6.1.61 F NUDIX domain
GMDDIDLE_02068 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
GMDDIDLE_02069 8.1e-112 srtA 3.4.22.70 M sortase family
GMDDIDLE_02070 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
GMDDIDLE_02071 2.8e-96 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GMDDIDLE_02072 4.6e-89 oppA E ABC transporter substrate-binding protein
GMDDIDLE_02074 2.7e-202 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
GMDDIDLE_02075 0.0 uvrA3 L excinuclease ABC, A subunit
GMDDIDLE_02076 4.1e-189 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
GMDDIDLE_02077 1.8e-113 3.6.1.27 I Acid phosphatase homologues

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)