ORF_ID e_value Gene_name EC_number CAZy COGs Description
HMCDFFFI_00001 6.5e-164 map 3.4.11.18 E Methionine Aminopeptidase
HMCDFFFI_00002 3.6e-163 yihY S Belongs to the UPF0761 family
HMCDFFFI_00003 7.3e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
HMCDFFFI_00004 2.3e-215 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
HMCDFFFI_00005 1.5e-214 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
HMCDFFFI_00006 1.9e-217 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
HMCDFFFI_00007 9.4e-46
HMCDFFFI_00008 3.7e-176 D Alpha beta
HMCDFFFI_00009 4.1e-264 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
HMCDFFFI_00010 5.6e-144 recX 2.4.1.337 GT4 S Regulatory protein RecX
HMCDFFFI_00011 1.6e-85
HMCDFFFI_00012 1.6e-74
HMCDFFFI_00013 1.1e-140 hlyX S Transporter associated domain
HMCDFFFI_00014 7.9e-304 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
HMCDFFFI_00015 9.2e-147
HMCDFFFI_00016 2.5e-265 V ABC transporter transmembrane region
HMCDFFFI_00017 1.8e-16
HMCDFFFI_00018 6.6e-51 L Transposase
HMCDFFFI_00019 5.2e-30
HMCDFFFI_00020 2.3e-44 XK27_09445 S Domain of unknown function (DUF1827)
HMCDFFFI_00021 0.0 clpE O Belongs to the ClpA ClpB family
HMCDFFFI_00022 5.3e-26
HMCDFFFI_00023 8.5e-41 ptsH G phosphocarrier protein HPR
HMCDFFFI_00024 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
HMCDFFFI_00025 2.3e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
HMCDFFFI_00026 2.5e-138 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
HMCDFFFI_00027 5.8e-160 coiA 3.6.4.12 S Competence protein
HMCDFFFI_00028 3.5e-114 yjbH Q Thioredoxin
HMCDFFFI_00029 3.6e-111 yjbK S CYTH
HMCDFFFI_00030 1.2e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
HMCDFFFI_00031 3.8e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
HMCDFFFI_00032 2.4e-172 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
HMCDFFFI_00033 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
HMCDFFFI_00034 2.5e-92 S SNARE associated Golgi protein
HMCDFFFI_00035 6.3e-201 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
HMCDFFFI_00036 2.2e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
HMCDFFFI_00037 2.6e-214 yubA S AI-2E family transporter
HMCDFFFI_00038 4.2e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
HMCDFFFI_00039 1.7e-69 WQ51_03320 S Protein of unknown function (DUF1149)
HMCDFFFI_00040 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
HMCDFFFI_00041 7.7e-222 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
HMCDFFFI_00042 3.9e-237 S Peptidase M16
HMCDFFFI_00043 1.4e-133 IQ Enoyl-(Acyl carrier protein) reductase
HMCDFFFI_00044 5.2e-97 ymfM S Helix-turn-helix domain
HMCDFFFI_00045 1.1e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
HMCDFFFI_00046 8.5e-196 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
HMCDFFFI_00047 4.3e-220 rny S Endoribonuclease that initiates mRNA decay
HMCDFFFI_00048 1.3e-210 tagO 2.7.8.33, 2.7.8.35 M transferase
HMCDFFFI_00049 5.1e-119 yvyE 3.4.13.9 S YigZ family
HMCDFFFI_00050 9.5e-247 comFA L Helicase C-terminal domain protein
HMCDFFFI_00051 3.1e-135 comFC S Competence protein
HMCDFFFI_00052 4.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
HMCDFFFI_00053 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
HMCDFFFI_00054 5.9e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
HMCDFFFI_00055 5.1e-17
HMCDFFFI_00056 1.4e-178 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
HMCDFFFI_00057 1.9e-158 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
HMCDFFFI_00058 3.9e-187 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
HMCDFFFI_00059 3.9e-181 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
HMCDFFFI_00060 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
HMCDFFFI_00061 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
HMCDFFFI_00062 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
HMCDFFFI_00063 1.4e-90 S Short repeat of unknown function (DUF308)
HMCDFFFI_00064 6.2e-165 rapZ S Displays ATPase and GTPase activities
HMCDFFFI_00065 1.1e-195 ybhK S Required for morphogenesis under gluconeogenic growth conditions
HMCDFFFI_00066 2.1e-171 whiA K May be required for sporulation
HMCDFFFI_00067 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
HMCDFFFI_00068 0.0 S SH3-like domain
HMCDFFFI_00069 4.9e-111 ybbL S ABC transporter, ATP-binding protein
HMCDFFFI_00070 1.6e-129 ybbM S Uncharacterised protein family (UPF0014)
HMCDFFFI_00071 5.7e-95 S Domain of unknown function (DUF4811)
HMCDFFFI_00072 6.4e-263 lmrB EGP Major facilitator Superfamily
HMCDFFFI_00073 5.4e-77 K MerR HTH family regulatory protein
HMCDFFFI_00074 2.8e-117 cylA V ABC transporter
HMCDFFFI_00075 3.4e-91 cylB V ABC-2 type transporter
HMCDFFFI_00076 6.7e-46 K LytTr DNA-binding domain
HMCDFFFI_00077 2.6e-33 S Protein of unknown function (DUF3021)
HMCDFFFI_00078 1.3e-142 S Cysteine-rich secretory protein family
HMCDFFFI_00079 1.7e-273 ycaM E amino acid
HMCDFFFI_00080 2.4e-289
HMCDFFFI_00082 9.5e-189 cggR K Putative sugar-binding domain
HMCDFFFI_00083 6.5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
HMCDFFFI_00084 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
HMCDFFFI_00085 1.7e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
HMCDFFFI_00086 1.2e-94
HMCDFFFI_00087 1.8e-156 ycsE S Sucrose-6F-phosphate phosphohydrolase
HMCDFFFI_00088 9.7e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
HMCDFFFI_00089 1.8e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
HMCDFFFI_00090 1.4e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
HMCDFFFI_00091 4e-98 dnaQ 2.7.7.7 L DNA polymerase III
HMCDFFFI_00092 1.8e-164 murB 1.3.1.98 M Cell wall formation
HMCDFFFI_00093 4.1e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
HMCDFFFI_00094 1.4e-131 potB P ABC transporter permease
HMCDFFFI_00095 2.1e-127 potC P ABC transporter permease
HMCDFFFI_00096 7.3e-208 potD P ABC transporter
HMCDFFFI_00097 6.4e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
HMCDFFFI_00098 3.7e-171 ybbR S YbbR-like protein
HMCDFFFI_00099 3.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
HMCDFFFI_00100 6.4e-148 S hydrolase
HMCDFFFI_00101 6e-76 K Penicillinase repressor
HMCDFFFI_00102 2.5e-119
HMCDFFFI_00103 7.4e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
HMCDFFFI_00104 2.7e-208 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
HMCDFFFI_00105 1.7e-143 licT K CAT RNA binding domain
HMCDFFFI_00106 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
HMCDFFFI_00107 1e-300 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
HMCDFFFI_00108 5e-176 D Alpha beta
HMCDFFFI_00109 1.8e-303 E Amino acid permease
HMCDFFFI_00111 9.8e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
HMCDFFFI_00112 3.2e-110 ylbE GM NAD(P)H-binding
HMCDFFFI_00113 2e-94 S VanZ like family
HMCDFFFI_00114 8.9e-133 yebC K Transcriptional regulatory protein
HMCDFFFI_00115 1.9e-178 comGA NU Type II IV secretion system protein
HMCDFFFI_00116 2.7e-172 comGB NU type II secretion system
HMCDFFFI_00117 3.1e-43 comGC U competence protein ComGC
HMCDFFFI_00118 7.4e-71
HMCDFFFI_00119 2.3e-41
HMCDFFFI_00120 3.8e-77 comGF U Putative Competence protein ComGF
HMCDFFFI_00121 1.8e-20
HMCDFFFI_00122 3.5e-188 ytxK 2.1.1.72 L N-6 DNA Methylase
HMCDFFFI_00123 5.4e-220 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
HMCDFFFI_00125 9.6e-89 M Protein of unknown function (DUF3737)
HMCDFFFI_00126 1.2e-224 patB 4.4.1.8 E Aminotransferase, class I
HMCDFFFI_00127 1e-189 manA 5.3.1.8 G mannose-6-phosphate isomerase
HMCDFFFI_00128 2.1e-64 S SdpI/YhfL protein family
HMCDFFFI_00129 4.4e-129 K Transcriptional regulatory protein, C terminal
HMCDFFFI_00130 7.2e-267 yclK 2.7.13.3, 4.6.1.1 T Histidine kinase
HMCDFFFI_00131 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
HMCDFFFI_00132 3.8e-105 vanZ V VanZ like family
HMCDFFFI_00133 1.1e-256 pgi 5.3.1.9 G Belongs to the GPI family
HMCDFFFI_00134 1.7e-217 EGP Major facilitator Superfamily
HMCDFFFI_00135 1e-195 ampC V Beta-lactamase
HMCDFFFI_00138 1.7e-262 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
HMCDFFFI_00139 1.3e-113 tdk 2.7.1.21 F thymidine kinase
HMCDFFFI_00140 6.9e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
HMCDFFFI_00141 2.5e-155 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
HMCDFFFI_00142 3.7e-190 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
HMCDFFFI_00143 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
HMCDFFFI_00144 1e-128 atpB C it plays a direct role in the translocation of protons across the membrane
HMCDFFFI_00145 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
HMCDFFFI_00146 3.4e-46 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
HMCDFFFI_00147 4.4e-92 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
HMCDFFFI_00148 2.5e-283 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
HMCDFFFI_00149 8.9e-173 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
HMCDFFFI_00150 3.3e-240 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
HMCDFFFI_00151 9e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
HMCDFFFI_00152 6.9e-31 ywzB S Protein of unknown function (DUF1146)
HMCDFFFI_00153 2.5e-178 mbl D Cell shape determining protein MreB Mrl
HMCDFFFI_00154 5.9e-51 yidD S Could be involved in insertion of integral membrane proteins into the membrane
HMCDFFFI_00155 1.5e-33 S Protein of unknown function (DUF2969)
HMCDFFFI_00156 1.2e-216 rodA D Belongs to the SEDS family
HMCDFFFI_00157 1.8e-78 usp6 T universal stress protein
HMCDFFFI_00158 8.4e-39
HMCDFFFI_00159 7.4e-239 rarA L recombination factor protein RarA
HMCDFFFI_00160 4.9e-84 yueI S Protein of unknown function (DUF1694)
HMCDFFFI_00161 1.4e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
HMCDFFFI_00162 1.2e-292 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
HMCDFFFI_00163 4.3e-214 iscS2 2.8.1.7 E Aminotransferase class V
HMCDFFFI_00164 2e-225 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
HMCDFFFI_00166 3.5e-82 K Helix-turn-helix XRE-family like proteins
HMCDFFFI_00167 2.9e-61
HMCDFFFI_00168 5.7e-33 gepA S Protein of unknown function (DUF4065)
HMCDFFFI_00169 4e-35
HMCDFFFI_00170 5.8e-209 mdtG EGP Major facilitator Superfamily
HMCDFFFI_00171 5.1e-176
HMCDFFFI_00172 2.8e-47 lysM M LysM domain
HMCDFFFI_00173 0.0 pepN 3.4.11.2 E aminopeptidase
HMCDFFFI_00174 1.8e-249 dtpT U amino acid peptide transporter
HMCDFFFI_00175 7.3e-19 S Sugar efflux transporter for intercellular exchange
HMCDFFFI_00176 3e-78 XK27_02470 K LytTr DNA-binding domain
HMCDFFFI_00177 2e-127 liaI S membrane
HMCDFFFI_00178 2e-239 L transposase, IS605 OrfB family
HMCDFFFI_00179 3.4e-15
HMCDFFFI_00180 5.5e-81 S Putative peptidoglycan binding domain
HMCDFFFI_00181 1.6e-94 S Putative peptidoglycan binding domain
HMCDFFFI_00182 3e-155 2.7.7.12 C Domain of unknown function (DUF4931)
HMCDFFFI_00183 9e-121
HMCDFFFI_00184 1.7e-142 S Belongs to the UPF0246 family
HMCDFFFI_00185 1.9e-141 aroD S Alpha/beta hydrolase family
HMCDFFFI_00186 3.5e-111 G phosphoglycerate mutase
HMCDFFFI_00187 4.2e-92 ygfC K Bacterial regulatory proteins, tetR family
HMCDFFFI_00188 9.5e-176 hrtB V ABC transporter permease
HMCDFFFI_00189 1.5e-102 devA 3.6.3.25 V ABC transporter, ATP-binding protein
HMCDFFFI_00190 3.4e-274 pipD E Dipeptidase
HMCDFFFI_00191 8e-38
HMCDFFFI_00192 6.3e-111 K WHG domain
HMCDFFFI_00193 2.4e-95 nqr 1.5.1.36 S NADPH-dependent FMN reductase
HMCDFFFI_00194 2e-97 azr 1.5.1.36 S NADPH-dependent FMN reductase
HMCDFFFI_00195 6e-151 3.1.3.48 T Tyrosine phosphatase family
HMCDFFFI_00196 9.5e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
HMCDFFFI_00198 3e-53 cvpA S Colicin V production protein
HMCDFFFI_00199 1.2e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
HMCDFFFI_00200 3.6e-146 noc K Belongs to the ParB family
HMCDFFFI_00201 3.4e-138 soj D Sporulation initiation inhibitor
HMCDFFFI_00202 1.9e-153 spo0J K Belongs to the ParB family
HMCDFFFI_00203 2.8e-44 yyzM S Bacterial protein of unknown function (DUF951)
HMCDFFFI_00204 3.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
HMCDFFFI_00205 5.3e-107 XK27_01040 S Protein of unknown function (DUF1129)
HMCDFFFI_00206 4e-301 V ABC transporter, ATP-binding protein
HMCDFFFI_00207 0.0 V ABC transporter
HMCDFFFI_00209 1.8e-205 L Probable transposase
HMCDFFFI_00210 3e-39 S HicB family
HMCDFFFI_00211 9.6e-121 K response regulator
HMCDFFFI_00212 4.6e-208 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
HMCDFFFI_00213 5.5e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
HMCDFFFI_00214 7.7e-140 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
HMCDFFFI_00215 3.1e-53 S Enterocin A Immunity
HMCDFFFI_00216 4.7e-32
HMCDFFFI_00217 1.2e-25
HMCDFFFI_00218 1e-24
HMCDFFFI_00219 2.5e-272 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
HMCDFFFI_00220 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
HMCDFFFI_00221 9.2e-10
HMCDFFFI_00222 1.8e-77
HMCDFFFI_00223 6.9e-30 yozG K Transcriptional regulator
HMCDFFFI_00224 1.4e-24
HMCDFFFI_00225 7.9e-57
HMCDFFFI_00226 3.6e-08
HMCDFFFI_00227 4.9e-29
HMCDFFFI_00228 5.9e-163 natA S ABC transporter, ATP-binding protein
HMCDFFFI_00229 3e-218 natB CP ABC-2 family transporter protein
HMCDFFFI_00230 1.8e-136 fruR K DeoR C terminal sensor domain
HMCDFFFI_00231 2.2e-168 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
HMCDFFFI_00232 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
HMCDFFFI_00233 1.2e-42 K helix_turn_helix, Arsenical Resistance Operon Repressor
HMCDFFFI_00234 2.1e-139 psaA P Belongs to the bacterial solute-binding protein 9 family
HMCDFFFI_00235 3e-108 fhuC P ABC transporter
HMCDFFFI_00236 7.9e-127 znuB U ABC 3 transport family
HMCDFFFI_00237 7.2e-262 lctP C L-lactate permease
HMCDFFFI_00238 6.1e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
HMCDFFFI_00239 4.4e-216 2.1.1.14 E methionine synthase, vitamin-B12 independent
HMCDFFFI_00240 6e-70 doc S Prophage maintenance system killer protein
HMCDFFFI_00241 2.9e-31
HMCDFFFI_00242 1e-13 Z012_06740 S Fic/DOC family
HMCDFFFI_00243 0.0 pepF E oligoendopeptidase F
HMCDFFFI_00244 3.6e-211 brpA K Cell envelope-like function transcriptional attenuator common domain protein
HMCDFFFI_00245 2.3e-122 S Protein of unknown function (DUF554)
HMCDFFFI_00246 1e-34
HMCDFFFI_00247 2.2e-102 rimL J Acetyltransferase (GNAT) domain
HMCDFFFI_00248 6.6e-63
HMCDFFFI_00249 4.1e-289 S ABC transporter
HMCDFFFI_00250 4.8e-137 thrE S Putative threonine/serine exporter
HMCDFFFI_00251 2.5e-83 S Threonine/Serine exporter, ThrE
HMCDFFFI_00252 2.2e-110 yvpB S Peptidase_C39 like family
HMCDFFFI_00253 8.6e-69
HMCDFFFI_00254 5.2e-178 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
HMCDFFFI_00255 1.9e-77 nrdI F NrdI Flavodoxin like
HMCDFFFI_00256 3.3e-112
HMCDFFFI_00257 5.5e-278 S O-antigen ligase like membrane protein
HMCDFFFI_00258 9.3e-44
HMCDFFFI_00259 3.6e-94 gmk2 2.7.4.8 F Guanylate kinase homologues.
HMCDFFFI_00260 1.1e-85 M NlpC/P60 family
HMCDFFFI_00261 1.4e-136 M NlpC P60 family protein
HMCDFFFI_00262 5.8e-118 M NlpC/P60 family
HMCDFFFI_00264 2.3e-174 S Cysteine-rich secretory protein family
HMCDFFFI_00265 3.4e-220 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
HMCDFFFI_00267 4.9e-41 relB L RelB antitoxin
HMCDFFFI_00268 4.2e-176 brpA K Cell envelope-like function transcriptional attenuator common domain protein
HMCDFFFI_00269 2.9e-146 epsB M biosynthesis protein
HMCDFFFI_00270 6e-119 ywqD 2.7.10.1 D Capsular exopolysaccharide family
HMCDFFFI_00271 8.2e-145 ywqE 3.1.3.48 GM PHP domain protein
HMCDFFFI_00272 1.4e-113 rfbP M Bacterial sugar transferase
HMCDFFFI_00273 1.3e-92 lsgF M Glycosyl transferase family 2
HMCDFFFI_00274 1.7e-87 M Glycosyl transferases group 1
HMCDFFFI_00275 9.3e-27 S EpsG family
HMCDFFFI_00276 3.7e-28 epsJ1 M Glycosyltransferase like family 2
HMCDFFFI_00277 6.3e-89 M Glycosyl transferase family 2
HMCDFFFI_00278 7e-206 glf 5.4.99.9 M UDP-galactopyranose mutase
HMCDFFFI_00279 3.5e-181 epsIIL S Membrane protein involved in the export of O-antigen and teichoic acid
HMCDFFFI_00280 7.4e-84 M LicD family
HMCDFFFI_00281 1e-138 M Nucleotidyl transferase
HMCDFFFI_00282 1.4e-261 2.7.1.89 M Nucleotidyl transferase
HMCDFFFI_00283 1.7e-260 E Amino acid permease
HMCDFFFI_00284 4.3e-63 ala 1.4.1.1 E Catalyzes the NAD( )-dependent oxidative deamination of L-alanine to pyruvate, and the reverse reaction, the reductive amination of pyruvate
HMCDFFFI_00285 1.1e-125 L Transposase IS66 family
HMCDFFFI_00286 4.2e-36 L PFAM IS66 Orf2 family protein
HMCDFFFI_00287 1.2e-70 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
HMCDFFFI_00288 7.9e-227 N Uncharacterized conserved protein (DUF2075)
HMCDFFFI_00289 6.2e-205 pbpX1 V Beta-lactamase
HMCDFFFI_00290 0.0 L Helicase C-terminal domain protein
HMCDFFFI_00291 5.1e-273 E amino acid
HMCDFFFI_00292 6.3e-159 xth 3.1.11.2 L exodeoxyribonuclease III
HMCDFFFI_00295 1.4e-192 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
HMCDFFFI_00296 7.4e-152 3.1.3.102, 3.1.3.104 S haloacid dehalogenase-like hydrolase
HMCDFFFI_00297 0.0 tetP J elongation factor G
HMCDFFFI_00298 1.4e-158 yvgN C Aldo keto reductase
HMCDFFFI_00299 2e-147 P CorA-like Mg2+ transporter protein
HMCDFFFI_00300 3.5e-134 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
HMCDFFFI_00301 9.8e-175 ABC-SBP S ABC transporter
HMCDFFFI_00302 7.4e-121 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
HMCDFFFI_00303 3.1e-136 XK27_08845 S ABC transporter, ATP-binding protein
HMCDFFFI_00304 2.1e-45 S PFAM Archaeal ATPase
HMCDFFFI_00306 1.3e-58 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
HMCDFFFI_00307 4.5e-45
HMCDFFFI_00309 5.5e-30
HMCDFFFI_00310 1.1e-40 S Protein of unknown function (DUF2922)
HMCDFFFI_00311 3.4e-141 S SLAP domain
HMCDFFFI_00312 1.1e-253 L Probable transposase
HMCDFFFI_00313 3.2e-86 L Resolvase, N terminal domain
HMCDFFFI_00314 6.6e-130 4.2.1.156, 4.2.1.42 M Enolase C-terminal domain-like
HMCDFFFI_00315 1.7e-88 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
HMCDFFFI_00316 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
HMCDFFFI_00317 8.3e-233 cycA E Amino acid permease
HMCDFFFI_00318 6e-08 S oxidoreductase activity
HMCDFFFI_00319 7.2e-100 S oxidoreductase activity
HMCDFFFI_00320 8.8e-184 L Transposase
HMCDFFFI_00321 4.8e-118 L Transposase
HMCDFFFI_00322 7.7e-56 L Transposase
HMCDFFFI_00323 8.3e-75 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
HMCDFFFI_00324 4.1e-156 K Transcriptional regulator
HMCDFFFI_00325 1.7e-63 manO S Domain of unknown function (DUF956)
HMCDFFFI_00326 1e-173 manN G system, mannose fructose sorbose family IID component
HMCDFFFI_00327 1.7e-129 manY G PTS system
HMCDFFFI_00328 1.6e-185 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
HMCDFFFI_00329 4.1e-80 fld C Flavodoxin
HMCDFFFI_00330 3.1e-87 gtcA S Teichoic acid glycosylation protein
HMCDFFFI_00331 2e-216 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
HMCDFFFI_00333 6.2e-249 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
HMCDFFFI_00334 2.8e-211 yfmL 3.6.4.13 L DEAD DEAH box helicase
HMCDFFFI_00335 1.8e-130 M Glycosyl hydrolases family 25
HMCDFFFI_00336 2.8e-230 potE E amino acid
HMCDFFFI_00337 0.0 1.3.5.4 C FAD binding domain
HMCDFFFI_00338 0.0 1.3.5.4 C FAD binding domain
HMCDFFFI_00339 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
HMCDFFFI_00340 6.3e-249 yhdP S Transporter associated domain
HMCDFFFI_00341 5e-119 C nitroreductase
HMCDFFFI_00342 2.1e-39
HMCDFFFI_00343 2.9e-87 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
HMCDFFFI_00344 7e-81
HMCDFFFI_00345 4.1e-147 glvR K Helix-turn-helix domain, rpiR family
HMCDFFFI_00346 0.0 glvC 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
HMCDFFFI_00347 7.5e-149 S hydrolase
HMCDFFFI_00348 7.6e-160 rssA S Phospholipase, patatin family
HMCDFFFI_00349 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
HMCDFFFI_00350 3.7e-137 glcR K DeoR C terminal sensor domain
HMCDFFFI_00351 1.9e-59 S Enterocin A Immunity
HMCDFFFI_00352 1.2e-154 S hydrolase
HMCDFFFI_00353 3e-133 ydhQ K UbiC transcription regulator-associated domain protein
HMCDFFFI_00354 8.3e-176 rihB 3.2.2.1 F Nucleoside
HMCDFFFI_00355 0.0 kup P Transport of potassium into the cell
HMCDFFFI_00356 1.3e-125 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
HMCDFFFI_00357 5.4e-167 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
HMCDFFFI_00358 7.7e-162 2.7.7.12 C Domain of unknown function (DUF4931)
HMCDFFFI_00359 2.9e-235 G Bacterial extracellular solute-binding protein
HMCDFFFI_00360 1.7e-212 S Uncharacterized protein conserved in bacteria (DUF2325)
HMCDFFFI_00361 2.5e-86
HMCDFFFI_00362 3.7e-27 L Transposase
HMCDFFFI_00363 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
HMCDFFFI_00364 0.0 mtlR K Mga helix-turn-helix domain
HMCDFFFI_00365 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
HMCDFFFI_00366 2.1e-79 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
HMCDFFFI_00367 3.7e-221 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
HMCDFFFI_00368 1.2e-132 4.1.1.44 S Carboxymuconolactone decarboxylase family
HMCDFFFI_00369 1.6e-32
HMCDFFFI_00370 2.6e-68 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
HMCDFFFI_00371 6.7e-156 K Helix-turn-helix XRE-family like proteins
HMCDFFFI_00373 3.3e-297 V ABC transporter transmembrane region
HMCDFFFI_00374 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
HMCDFFFI_00375 0.0 S TerB-C domain
HMCDFFFI_00376 5.4e-253 P P-loop Domain of unknown function (DUF2791)
HMCDFFFI_00377 0.0 lhr L DEAD DEAH box helicase
HMCDFFFI_00378 1.9e-59
HMCDFFFI_00379 4.1e-141 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
HMCDFFFI_00381 1e-61 psiE S Phosphate-starvation-inducible E
HMCDFFFI_00382 3.8e-113 yncA 2.3.1.79 S Maltose acetyltransferase
HMCDFFFI_00383 1.5e-70 S Iron-sulphur cluster biosynthesis
HMCDFFFI_00385 2.3e-30
HMCDFFFI_00386 3.4e-171 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
HMCDFFFI_00387 6.2e-12
HMCDFFFI_00388 1.1e-115 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
HMCDFFFI_00389 1.1e-28 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
HMCDFFFI_00390 6.8e-79 M LysM domain protein
HMCDFFFI_00391 1.5e-160 D nuclear chromosome segregation
HMCDFFFI_00392 1.2e-105 G Phosphoglycerate mutase family
HMCDFFFI_00393 3.7e-88 G Histidine phosphatase superfamily (branch 1)
HMCDFFFI_00394 5.4e-113 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
HMCDFFFI_00395 1.9e-113 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
HMCDFFFI_00397 1.4e-220 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
HMCDFFFI_00398 5e-187 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
HMCDFFFI_00399 8.7e-122 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
HMCDFFFI_00400 4.4e-144 K SIS domain
HMCDFFFI_00401 2.3e-228 slpX S SLAP domain
HMCDFFFI_00402 1.3e-22 3.6.4.12 S transposase or invertase
HMCDFFFI_00403 7.7e-12
HMCDFFFI_00404 3.2e-240 npr 1.11.1.1 C NADH oxidase
HMCDFFFI_00407 5.1e-60
HMCDFFFI_00409 1.1e-98 S D5 N terminal like
HMCDFFFI_00410 2.2e-48
HMCDFFFI_00412 1.2e-21
HMCDFFFI_00413 1.1e-11 S Helix-turn-helix domain
HMCDFFFI_00414 9.1e-29 K Transcriptional
HMCDFFFI_00415 4.7e-221 sip L Belongs to the 'phage' integrase family
HMCDFFFI_00416 3e-298 oppA2 E ABC transporter, substratebinding protein
HMCDFFFI_00417 2.5e-179
HMCDFFFI_00418 4.6e-123 gntR1 K UTRA
HMCDFFFI_00419 5.1e-71 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
HMCDFFFI_00420 4.3e-135 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
HMCDFFFI_00421 9e-206 csaB M Glycosyl transferases group 1
HMCDFFFI_00422 2.7e-285 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
HMCDFFFI_00423 4e-153 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
HMCDFFFI_00424 0.0 pacL 3.6.3.8 P P-type ATPase
HMCDFFFI_00425 6e-224 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
HMCDFFFI_00426 6.4e-260 epsU S Polysaccharide biosynthesis protein
HMCDFFFI_00427 9.1e-135 M Glycosyltransferase sugar-binding region containing DXD motif
HMCDFFFI_00428 1.8e-83 ydcK S Belongs to the SprT family
HMCDFFFI_00430 2.5e-86 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
HMCDFFFI_00431 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
HMCDFFFI_00432 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
HMCDFFFI_00433 5.4e-201 camS S sex pheromone
HMCDFFFI_00434 1.5e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
HMCDFFFI_00435 5.2e-270 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
HMCDFFFI_00436 4.1e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
HMCDFFFI_00437 7.2e-172 yegS 2.7.1.107 G Lipid kinase
HMCDFFFI_00438 4.3e-108 ybhL S Belongs to the BI1 family
HMCDFFFI_00439 2.6e-57
HMCDFFFI_00440 3.1e-100 VPA0052 I transferase activity, transferring acyl groups other than amino-acyl groups
HMCDFFFI_00441 2.8e-244 nhaC C Na H antiporter NhaC
HMCDFFFI_00442 6.3e-201 pbpX V Beta-lactamase
HMCDFFFI_00443 5.8e-255 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
HMCDFFFI_00444 1.1e-94 MA20_25245 K Acetyltransferase (GNAT) domain
HMCDFFFI_00449 1.7e-260 emrY EGP Major facilitator Superfamily
HMCDFFFI_00450 2e-91 yxdD K Bacterial regulatory proteins, tetR family
HMCDFFFI_00451 1.1e-32 4.2.1.53 S Myosin-crossreactive antigen
HMCDFFFI_00452 2.5e-242 L DDE superfamily endonuclease
HMCDFFFI_00453 3.6e-77 vatD S acetyltransferase'
HMCDFFFI_00454 1.8e-215 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
HMCDFFFI_00455 1.2e-222 patA 2.6.1.1 E Aminotransferase
HMCDFFFI_00456 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
HMCDFFFI_00457 6.8e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
HMCDFFFI_00458 6e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
HMCDFFFI_00459 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
HMCDFFFI_00460 2.9e-60
HMCDFFFI_00461 9.3e-175 prmA J Ribosomal protein L11 methyltransferase
HMCDFFFI_00462 8.2e-85 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
HMCDFFFI_00463 1.9e-250 yjjP S Putative threonine/serine exporter
HMCDFFFI_00464 2.6e-177 citR K Putative sugar-binding domain
HMCDFFFI_00465 5e-51
HMCDFFFI_00466 4.2e-09
HMCDFFFI_00467 2.9e-66 S Domain of unknown function DUF1828
HMCDFFFI_00468 7.4e-95 S UPF0397 protein
HMCDFFFI_00469 0.0 ykoD P ABC transporter, ATP-binding protein
HMCDFFFI_00470 3.6e-146 cbiQ P cobalt transport
HMCDFFFI_00471 1.8e-22
HMCDFFFI_00472 9.3e-72 yeaL S Protein of unknown function (DUF441)
HMCDFFFI_00473 4.9e-290 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
HMCDFFFI_00474 1.1e-167 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
HMCDFFFI_00475 1.2e-43 citD C Covalent carrier of the coenzyme of citrate lyase
HMCDFFFI_00476 2.2e-196 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
HMCDFFFI_00477 5.8e-154 ydjP I Alpha/beta hydrolase family
HMCDFFFI_00478 5.2e-273 P Sodium:sulfate symporter transmembrane region
HMCDFFFI_00479 1.3e-133 hxlA 6.2.1.3 H Aldolase/RraA
HMCDFFFI_00480 3.7e-254 pepC 3.4.22.40 E Peptidase C1-like family
HMCDFFFI_00481 3.1e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
HMCDFFFI_00482 2.5e-261 frdC 1.3.5.4 C FAD binding domain
HMCDFFFI_00483 9e-267 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
HMCDFFFI_00484 2e-73 metI P ABC transporter permease
HMCDFFFI_00485 1.2e-189 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
HMCDFFFI_00486 2e-160 metQ2 P Belongs to the nlpA lipoprotein family
HMCDFFFI_00487 2.9e-176 F DNA/RNA non-specific endonuclease
HMCDFFFI_00488 0.0 aha1 P E1-E2 ATPase
HMCDFFFI_00489 1.5e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
HMCDFFFI_00490 1.8e-178 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
HMCDFFFI_00491 2.4e-251 yifK E Amino acid permease
HMCDFFFI_00492 3.9e-282 V ABC-type multidrug transport system, ATPase and permease components
HMCDFFFI_00493 5.2e-287 P ABC transporter
HMCDFFFI_00494 4.4e-85 dps P Belongs to the Dps family
HMCDFFFI_00495 1.3e-31 npr 1.11.1.1 C NADH oxidase
HMCDFFFI_00496 0.0 pepO 3.4.24.71 O Peptidase family M13
HMCDFFFI_00497 0.0 mdlB V ABC transporter
HMCDFFFI_00498 0.0 mdlA V ABC transporter
HMCDFFFI_00499 3.3e-30 yneF S Uncharacterised protein family (UPF0154)
HMCDFFFI_00500 1.4e-38 ynzC S UPF0291 protein
HMCDFFFI_00501 2e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
HMCDFFFI_00502 3.7e-145 E GDSL-like Lipase/Acylhydrolase family
HMCDFFFI_00503 3.2e-121 ung2 3.2.2.27 L Uracil-DNA glycosylase
HMCDFFFI_00504 3.8e-215 S SLAP domain
HMCDFFFI_00505 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
HMCDFFFI_00506 6.1e-134 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
HMCDFFFI_00507 2.2e-93 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
HMCDFFFI_00508 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
HMCDFFFI_00509 5.8e-229 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
HMCDFFFI_00510 4.6e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
HMCDFFFI_00511 4.9e-260 yfnA E amino acid
HMCDFFFI_00512 0.0 V FtsX-like permease family
HMCDFFFI_00513 2.4e-133 cysA V ABC transporter, ATP-binding protein
HMCDFFFI_00514 4.7e-287 pipD E Dipeptidase
HMCDFFFI_00515 8.6e-163 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
HMCDFFFI_00516 0.0 smc D Required for chromosome condensation and partitioning
HMCDFFFI_00517 5.5e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
HMCDFFFI_00518 1.4e-309 oppA E ABC transporter substrate-binding protein
HMCDFFFI_00519 4.5e-269 oppA E ABC transporter substrate-binding protein
HMCDFFFI_00520 1.4e-11 oppA E ABC transporter substrate-binding protein
HMCDFFFI_00521 6.2e-131 oppC P Binding-protein-dependent transport system inner membrane component
HMCDFFFI_00522 7.5e-172 oppB P ABC transporter permease
HMCDFFFI_00523 8.8e-168 oppF P Belongs to the ABC transporter superfamily
HMCDFFFI_00524 1.1e-192 oppD P Belongs to the ABC transporter superfamily
HMCDFFFI_00525 1.8e-34 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
HMCDFFFI_00526 1.6e-180 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
HMCDFFFI_00527 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
HMCDFFFI_00528 2e-305 yloV S DAK2 domain fusion protein YloV
HMCDFFFI_00529 4e-57 asp S Asp23 family, cell envelope-related function
HMCDFFFI_00530 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
HMCDFFFI_00531 4.1e-124 thiN 2.7.6.2 H thiamine pyrophosphokinase
HMCDFFFI_00532 1.7e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
HMCDFFFI_00533 6.3e-165 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
HMCDFFFI_00534 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
HMCDFFFI_00535 1.3e-139 stp 3.1.3.16 T phosphatase
HMCDFFFI_00536 4.7e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
HMCDFFFI_00537 1.3e-171 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
HMCDFFFI_00538 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
HMCDFFFI_00539 1.1e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
HMCDFFFI_00540 2.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
HMCDFFFI_00541 1.1e-77 6.3.3.2 S ASCH
HMCDFFFI_00542 4.8e-307 recN L May be involved in recombinational repair of damaged DNA
HMCDFFFI_00543 2.3e-153 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
HMCDFFFI_00544 2.4e-161 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
HMCDFFFI_00545 3.7e-35 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
HMCDFFFI_00546 2.2e-193 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
HMCDFFFI_00547 6.7e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
HMCDFFFI_00548 2.1e-64 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
HMCDFFFI_00549 3.4e-71 yqhY S Asp23 family, cell envelope-related function
HMCDFFFI_00550 4.9e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
HMCDFFFI_00551 6.6e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
HMCDFFFI_00552 7.8e-48 rpmA J Belongs to the bacterial ribosomal protein bL27 family
HMCDFFFI_00553 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
HMCDFFFI_00554 1.4e-150 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
HMCDFFFI_00555 6.6e-254 S Uncharacterized protein conserved in bacteria (DUF2325)
HMCDFFFI_00558 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
HMCDFFFI_00559 1e-299 S Predicted membrane protein (DUF2207)
HMCDFFFI_00560 2.1e-160 cinI S Serine hydrolase (FSH1)
HMCDFFFI_00561 5.4e-207 M Glycosyl hydrolases family 25
HMCDFFFI_00563 2.9e-178 I Carboxylesterase family
HMCDFFFI_00564 1.5e-64 arsC 1.20.4.1 P Belongs to the ArsC family
HMCDFFFI_00565 5.2e-279 V ABC-type multidrug transport system, ATPase and permease components
HMCDFFFI_00566 5.4e-292 V ABC-type multidrug transport system, ATPase and permease components
HMCDFFFI_00567 2.5e-152 S haloacid dehalogenase-like hydrolase
HMCDFFFI_00568 2.6e-52
HMCDFFFI_00569 1.9e-37
HMCDFFFI_00570 1.2e-42 S Alpha beta hydrolase
HMCDFFFI_00571 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
HMCDFFFI_00572 2.8e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
HMCDFFFI_00573 7.1e-46
HMCDFFFI_00574 1.8e-148 glcU U sugar transport
HMCDFFFI_00575 2.2e-250 lctP C L-lactate permease
HMCDFFFI_00576 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
HMCDFFFI_00577 2.4e-211 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
HMCDFFFI_00578 4e-245 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
HMCDFFFI_00579 1.6e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
HMCDFFFI_00580 1.8e-93 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
HMCDFFFI_00581 2e-166 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
HMCDFFFI_00582 4.6e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
HMCDFFFI_00583 1.1e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
HMCDFFFI_00584 6.9e-20 clcA P chloride
HMCDFFFI_00585 3.9e-38 clcA P chloride
HMCDFFFI_00586 2.1e-285 lsa S ABC transporter
HMCDFFFI_00587 3.7e-45
HMCDFFFI_00588 2.7e-117 sdaAB 4.3.1.17 E Serine dehydratase beta chain
HMCDFFFI_00589 1.2e-149 K Periplasmic binding protein-like domain
HMCDFFFI_00590 9.8e-106 K Transcriptional regulator, AbiEi antitoxin
HMCDFFFI_00591 6e-26 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
HMCDFFFI_00592 7e-127 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
HMCDFFFI_00593 4.1e-189 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
HMCDFFFI_00594 3.1e-186 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
HMCDFFFI_00595 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
HMCDFFFI_00596 2.5e-186 lacR K Transcriptional regulator
HMCDFFFI_00597 0.0 lacS G Transporter
HMCDFFFI_00598 0.0 lacZ 3.2.1.23 G -beta-galactosidase
HMCDFFFI_00599 6.2e-221 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
HMCDFFFI_00600 6.3e-287 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
HMCDFFFI_00601 1.7e-195 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
HMCDFFFI_00602 5.5e-36
HMCDFFFI_00603 4.7e-174 scrR K Periplasmic binding protein domain
HMCDFFFI_00604 3.2e-239 msmE G Bacterial extracellular solute-binding protein
HMCDFFFI_00605 4e-156 msmF P Binding-protein-dependent transport system inner membrane component
HMCDFFFI_00606 5.2e-153 msmG P Binding-protein-dependent transport system inner membrane component
HMCDFFFI_00607 2.8e-210 msmX P Belongs to the ABC transporter superfamily
HMCDFFFI_00608 0.0 rafA 3.2.1.22 G alpha-galactosidase
HMCDFFFI_00609 5.1e-281 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
HMCDFFFI_00610 1.9e-112 2.7.6.5 T Region found in RelA / SpoT proteins
HMCDFFFI_00611 1.4e-72 K response regulator
HMCDFFFI_00612 8.3e-66 L Resolvase, N-terminal
HMCDFFFI_00613 5.7e-148 L Putative transposase DNA-binding domain
HMCDFFFI_00614 1.6e-23 K response regulator
HMCDFFFI_00615 4.7e-222 sptS 2.7.13.3 T Histidine kinase
HMCDFFFI_00616 2.1e-208 EGP Major facilitator Superfamily
HMCDFFFI_00617 6.6e-69 O OsmC-like protein
HMCDFFFI_00618 4e-95 S Protein of unknown function (DUF805)
HMCDFFFI_00619 2.2e-78
HMCDFFFI_00620 1.4e-286
HMCDFFFI_00621 1.2e-137 S Fic/DOC family
HMCDFFFI_00622 1.1e-89 S SLAP domain
HMCDFFFI_00623 8.4e-188 S SLAP domain
HMCDFFFI_00624 7.4e-72 yjeM E Amino Acid
HMCDFFFI_00625 3.4e-197 yjeM E Amino Acid
HMCDFFFI_00626 8.4e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
HMCDFFFI_00627 4.4e-244 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
HMCDFFFI_00628 7.8e-73
HMCDFFFI_00630 7.2e-86 K DNA-templated transcription, initiation
HMCDFFFI_00631 1.5e-25
HMCDFFFI_00632 3e-148 3.6.4.12 S PD-(D/E)XK nuclease family transposase
HMCDFFFI_00633 8.2e-149 S SLAP domain
HMCDFFFI_00634 8.8e-81 L transposase, IS605 OrfB family
HMCDFFFI_00635 9.4e-74 K Copper transport repressor CopY TcrY
HMCDFFFI_00636 0.0 copB 3.6.3.4 P P-type ATPase
HMCDFFFI_00638 5.2e-97 cadD P Cadmium resistance transporter
HMCDFFFI_00639 2.4e-43 L transposase activity
HMCDFFFI_00640 9.2e-215 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
HMCDFFFI_00641 8.7e-209 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
HMCDFFFI_00642 0.0 yjbQ P TrkA C-terminal domain protein
HMCDFFFI_00643 3.6e-117 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
HMCDFFFI_00644 2.2e-179 S Oxidoreductase family, NAD-binding Rossmann fold
HMCDFFFI_00645 9.5e-144
HMCDFFFI_00646 2.3e-136
HMCDFFFI_00647 5e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
HMCDFFFI_00648 4.9e-99 G Aldose 1-epimerase
HMCDFFFI_00649 3e-201 brpA K Cell envelope-like function transcriptional attenuator common domain protein
HMCDFFFI_00650 7.3e-112 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
HMCDFFFI_00651 0.0 XK27_08315 M Sulfatase
HMCDFFFI_00652 1.6e-243 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
HMCDFFFI_00654 2.7e-248 S DNA primase
HMCDFFFI_00655 2e-49
HMCDFFFI_00658 8.8e-47
HMCDFFFI_00659 1.5e-95 tnpR1 L Resolvase, N terminal domain
HMCDFFFI_00660 9.1e-105 ropB K Transcriptional regulator
HMCDFFFI_00661 1.4e-197 EGP Major facilitator Superfamily
HMCDFFFI_00662 7.8e-50 E Zn peptidase
HMCDFFFI_00663 3.7e-39 ps115 K Helix-turn-helix XRE-family like proteins
HMCDFFFI_00664 2.1e-46
HMCDFFFI_00665 2.5e-79 S Bacteriocin helveticin-J
HMCDFFFI_00666 7.5e-161 S SLAP domain
HMCDFFFI_00667 1.3e-63 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
HMCDFFFI_00668 1.4e-115 lacA 2.3.1.79 S Transferase hexapeptide repeat
HMCDFFFI_00669 9.3e-204 pbpX1 V Beta-lactamase
HMCDFFFI_00670 5.1e-100 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
HMCDFFFI_00671 1.1e-93 S ECF-type riboflavin transporter, S component
HMCDFFFI_00672 2e-230 S Putative peptidoglycan binding domain
HMCDFFFI_00673 1.1e-83 K Acetyltransferase (GNAT) domain
HMCDFFFI_00674 1.7e-251 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
HMCDFFFI_00675 4.7e-190 yrvN L AAA C-terminal domain
HMCDFFFI_00676 1.1e-63 spxA_2 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
HMCDFFFI_00677 4.2e-269 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
HMCDFFFI_00678 1.3e-17
HMCDFFFI_00679 5.6e-239 G Bacterial extracellular solute-binding protein
HMCDFFFI_00680 1.3e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
HMCDFFFI_00681 1.2e-235 XK27_01810 S Calcineurin-like phosphoesterase
HMCDFFFI_00683 0.0 S SLAP domain
HMCDFFFI_00684 0.0 hsdR 3.1.21.3 L DEAD/DEAH box helicase
HMCDFFFI_00685 1.7e-166 S AAA domain, putative AbiEii toxin, Type IV TA system
HMCDFFFI_00686 2.6e-42 S RloB-like protein
HMCDFFFI_00687 1.7e-260 hsdM 2.1.1.72 V type I restriction-modification system
HMCDFFFI_00688 1.3e-30 3.1.21.3 V COG0732 Restriction endonuclease S subunits
HMCDFFFI_00689 4e-127 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
HMCDFFFI_00690 8.5e-116 S MTH538 TIR-like domain (DUF1863)
HMCDFFFI_00691 1.3e-75
HMCDFFFI_00692 8.5e-143
HMCDFFFI_00694 0.0 yfjM S Protein of unknown function DUF262
HMCDFFFI_00695 6.4e-23 S Domain of unknown function (DUF3841)
HMCDFFFI_00696 5.3e-90
HMCDFFFI_00697 7.9e-68 S Sel1-like repeats.
HMCDFFFI_00698 2.2e-78 S HIRAN
HMCDFFFI_00699 2.6e-32
HMCDFFFI_00700 1e-179
HMCDFFFI_00701 1.5e-103 3.1.4.37 S AAA domain
HMCDFFFI_00702 1.8e-24 S Sel1-like repeats.
HMCDFFFI_00703 4.3e-43 S Sel1-like repeats.
HMCDFFFI_00704 9.3e-63 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
HMCDFFFI_00705 0.0 tetP J Elongation factor G, domain IV
HMCDFFFI_00706 7.8e-28
HMCDFFFI_00707 1.9e-68 S Bacterial mobilisation protein (MobC)
HMCDFFFI_00708 2e-178 D nuclear chromosome segregation
HMCDFFFI_00709 6.2e-157 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
HMCDFFFI_00710 5.5e-53
HMCDFFFI_00711 7.7e-281 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
HMCDFFFI_00712 2.8e-79 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
HMCDFFFI_00713 4.3e-169 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
HMCDFFFI_00714 5.1e-198 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
HMCDFFFI_00715 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
HMCDFFFI_00716 0.0 FbpA K Fibronectin-binding protein
HMCDFFFI_00717 1.1e-66
HMCDFFFI_00718 3.5e-160 degV S EDD domain protein, DegV family
HMCDFFFI_00719 3.3e-304 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
HMCDFFFI_00720 1.8e-203 xerS L Belongs to the 'phage' integrase family
HMCDFFFI_00721 4.1e-67
HMCDFFFI_00722 8e-111 XK27_00160 S Domain of unknown function (DUF5052)
HMCDFFFI_00723 1.5e-211 M Glycosyl hydrolases family 25
HMCDFFFI_00724 2e-39 S Transglycosylase associated protein
HMCDFFFI_00725 2.7e-123 yoaK S Protein of unknown function (DUF1275)
HMCDFFFI_00726 4e-57 K Helix-turn-helix domain
HMCDFFFI_00727 1.1e-112 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
HMCDFFFI_00728 7.3e-172 ppaC 3.6.1.1 C inorganic pyrophosphatase
HMCDFFFI_00729 4.3e-183 K Transcriptional regulator
HMCDFFFI_00730 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
HMCDFFFI_00731 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
HMCDFFFI_00732 3.5e-109 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
HMCDFFFI_00733 0.0 snf 2.7.11.1 KL domain protein
HMCDFFFI_00734 1e-18 snf 2.7.11.1 KL domain protein
HMCDFFFI_00735 1.5e-36
HMCDFFFI_00737 1e-104 pncA Q Isochorismatase family
HMCDFFFI_00738 4.9e-118
HMCDFFFI_00741 3.6e-63
HMCDFFFI_00742 3.4e-33
HMCDFFFI_00743 1.9e-115 rdgB 3.6.1.66, 5.1.1.3 F Ham1 family
HMCDFFFI_00744 3.4e-79
HMCDFFFI_00745 1e-242 cpdA S Calcineurin-like phosphoesterase
HMCDFFFI_00746 1.6e-218 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
HMCDFFFI_00747 1.1e-68 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
HMCDFFFI_00748 1e-107 ypsA S Belongs to the UPF0398 family
HMCDFFFI_00749 4.5e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
HMCDFFFI_00750 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
HMCDFFFI_00751 1.2e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
HMCDFFFI_00752 1.3e-114 dnaD L DnaD domain protein
HMCDFFFI_00753 1.2e-260 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
HMCDFFFI_00754 2.4e-89 ypmB S Protein conserved in bacteria
HMCDFFFI_00755 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
HMCDFFFI_00756 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
HMCDFFFI_00757 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
HMCDFFFI_00758 2.2e-136 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
HMCDFFFI_00759 1.4e-178 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
HMCDFFFI_00760 2.1e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
HMCDFFFI_00761 8.2e-185 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
HMCDFFFI_00762 2.2e-116 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
HMCDFFFI_00763 1.4e-264 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
HMCDFFFI_00764 4.8e-168
HMCDFFFI_00765 1.8e-144
HMCDFFFI_00766 2.5e-103 lepB 3.4.21.89 U Belongs to the peptidase S26 family
HMCDFFFI_00767 3.8e-27
HMCDFFFI_00768 2.3e-145
HMCDFFFI_00769 1.7e-137
HMCDFFFI_00770 7e-142
HMCDFFFI_00771 2.1e-123 skfE V ATPases associated with a variety of cellular activities
HMCDFFFI_00772 4.7e-61 yvoA_1 K Transcriptional regulator, GntR family
HMCDFFFI_00773 1.8e-242 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
HMCDFFFI_00774 5e-153 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
HMCDFFFI_00775 2.4e-124 trmK 2.1.1.217 S SAM-dependent methyltransferase
HMCDFFFI_00776 4.8e-81 mutT 3.6.1.55 F NUDIX domain
HMCDFFFI_00777 8e-128 S Peptidase family M23
HMCDFFFI_00778 9.9e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
HMCDFFFI_00779 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
HMCDFFFI_00780 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
HMCDFFFI_00781 4.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
HMCDFFFI_00782 1.1e-136 recO L Involved in DNA repair and RecF pathway recombination
HMCDFFFI_00783 1.3e-238 L transposase, IS605 OrfB family
HMCDFFFI_00784 3.7e-27 L Transposase
HMCDFFFI_00785 3.1e-54
HMCDFFFI_00787 4.2e-258 pepC 3.4.22.40 E aminopeptidase
HMCDFFFI_00788 1.2e-123 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
HMCDFFFI_00789 5e-301 oppA E ABC transporter, substratebinding protein
HMCDFFFI_00790 5e-309 oppA E ABC transporter, substratebinding protein
HMCDFFFI_00791 1.7e-210 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
HMCDFFFI_00792 1.1e-146 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
HMCDFFFI_00793 8e-188 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
HMCDFFFI_00794 4.7e-199 oppD P Belongs to the ABC transporter superfamily
HMCDFFFI_00795 1.9e-175 oppF P Belongs to the ABC transporter superfamily
HMCDFFFI_00796 1.4e-256 pepC 3.4.22.40 E aminopeptidase
HMCDFFFI_00797 2.6e-68 hsp O Belongs to the small heat shock protein (HSP20) family
HMCDFFFI_00798 2.6e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
HMCDFFFI_00799 1.2e-112
HMCDFFFI_00801 1.2e-111 E Belongs to the SOS response-associated peptidase family
HMCDFFFI_00802 3.7e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
HMCDFFFI_00803 6.1e-90 comEB 3.5.4.12 F MafB19-like deaminase
HMCDFFFI_00804 2e-103 S TPM domain
HMCDFFFI_00805 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
HMCDFFFI_00807 1.3e-112 V ABC-type multidrug transport system, ATPase and permease components
HMCDFFFI_00808 3.4e-09 KLT Protein kinase domain
HMCDFFFI_00809 2.4e-159 V ABC-type multidrug transport system, ATPase and permease components
HMCDFFFI_00810 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
HMCDFFFI_00811 5.1e-147 tatD L hydrolase, TatD family
HMCDFFFI_00812 1e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
HMCDFFFI_00813 4.6e-160 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
HMCDFFFI_00814 1.2e-39 veg S Biofilm formation stimulator VEG
HMCDFFFI_00815 7.7e-149 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
HMCDFFFI_00816 8.9e-174 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
HMCDFFFI_00817 5.3e-80
HMCDFFFI_00818 0.0 S SLAP domain
HMCDFFFI_00819 6e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
HMCDFFFI_00820 5.7e-169 2.7.1.2 GK ROK family
HMCDFFFI_00821 2.2e-36
HMCDFFFI_00822 1.9e-269 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
HMCDFFFI_00823 5.9e-68 S Domain of unknown function (DUF1934)
HMCDFFFI_00824 1.7e-46 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
HMCDFFFI_00825 4.5e-311 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
HMCDFFFI_00826 6.9e-245 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
HMCDFFFI_00827 2.7e-75 K acetyltransferase
HMCDFFFI_00828 4.4e-285 pipD E Dipeptidase
HMCDFFFI_00829 4.1e-155 msmR K AraC-like ligand binding domain
HMCDFFFI_00830 1.6e-222 pbuX F xanthine permease
HMCDFFFI_00831 1.2e-103 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
HMCDFFFI_00832 1.6e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
HMCDFFFI_00833 1e-201 3.2.1.18 GH33 M Rib/alpha-like repeat
HMCDFFFI_00834 1.2e-263
HMCDFFFI_00835 3.3e-22 glsA 3.5.1.2 E Belongs to the glutaminase family
HMCDFFFI_00836 1.7e-86 glsA 3.5.1.2 E Belongs to the glutaminase family
HMCDFFFI_00837 3.1e-131 3.1.3.48 T Tyrosine phosphatase family
HMCDFFFI_00838 9e-22 S Protein of unknown function (DUF3923)
HMCDFFFI_00839 1.1e-54
HMCDFFFI_00840 2.9e-45 S MazG-like family
HMCDFFFI_00841 2.4e-59
HMCDFFFI_00842 3.8e-88 speG J Acetyltransferase (GNAT) domain
HMCDFFFI_00843 1.5e-34
HMCDFFFI_00844 3.1e-284 V ABC transporter transmembrane region
HMCDFFFI_00845 2.2e-287 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
HMCDFFFI_00846 1e-229 S Tetratricopeptide repeat protein
HMCDFFFI_00847 2.3e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
HMCDFFFI_00848 1.9e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
HMCDFFFI_00849 5.5e-212 rpsA 1.17.7.4 J Ribosomal protein S1
HMCDFFFI_00850 2.2e-114 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
HMCDFFFI_00851 2.7e-18 M Lysin motif
HMCDFFFI_00852 7.9e-115 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
HMCDFFFI_00853 3.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
HMCDFFFI_00854 4.1e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
HMCDFFFI_00855 7.6e-132 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
HMCDFFFI_00856 2.6e-61 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
HMCDFFFI_00857 9e-167 xerD D recombinase XerD
HMCDFFFI_00858 5.5e-169 cvfB S S1 domain
HMCDFFFI_00859 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
HMCDFFFI_00860 3.3e-183 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
HMCDFFFI_00861 0.0 dnaE 2.7.7.7 L DNA polymerase
HMCDFFFI_00862 2.3e-23 S Protein of unknown function (DUF2929)
HMCDFFFI_00863 3.6e-309 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
HMCDFFFI_00864 1.3e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
HMCDFFFI_00865 1.5e-34 yrvD S Lipopolysaccharide assembly protein A domain
HMCDFFFI_00866 1.6e-143 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
HMCDFFFI_00867 5.8e-177 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
HMCDFFFI_00868 3.7e-295 I Acyltransferase
HMCDFFFI_00869 1.7e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
HMCDFFFI_00870 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
HMCDFFFI_00871 1.8e-110 dedA 3.1.3.1 S SNARE associated Golgi protein
HMCDFFFI_00872 6.9e-243 yfnA E Amino Acid
HMCDFFFI_00873 2.3e-181 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
HMCDFFFI_00874 5.2e-150 yxeH S hydrolase
HMCDFFFI_00875 6.6e-156 S reductase
HMCDFFFI_00876 9.5e-82 XK27_04435 3.5.4.5 J FR47-like protein
HMCDFFFI_00877 1.4e-36 S Cytochrome B5
HMCDFFFI_00878 4.6e-168 arbZ I Phosphate acyltransferases
HMCDFFFI_00879 1.6e-182 arbY M Glycosyl transferase family 8
HMCDFFFI_00880 4.5e-185 arbY M Glycosyl transferase family 8
HMCDFFFI_00881 1.2e-157 arbx M Glycosyl transferase family 8
HMCDFFFI_00882 1.4e-149 arbV 2.3.1.51 I Acyl-transferase
HMCDFFFI_00884 1.9e-33
HMCDFFFI_00886 4.8e-131 K response regulator
HMCDFFFI_00887 2.2e-305 vicK 2.7.13.3 T Histidine kinase
HMCDFFFI_00888 3.7e-257 yycH S YycH protein
HMCDFFFI_00889 3.4e-149 yycI S YycH protein
HMCDFFFI_00890 8.2e-148 vicX 3.1.26.11 S domain protein
HMCDFFFI_00891 3.3e-151 htrA 3.4.21.107 O serine protease
HMCDFFFI_00892 1e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
HMCDFFFI_00893 3.2e-103 G Peptidase_C39 like family
HMCDFFFI_00894 2.1e-176 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
HMCDFFFI_00895 3.6e-77 P Cobalt transport protein
HMCDFFFI_00896 9.7e-250 cbiO1 S ABC transporter, ATP-binding protein
HMCDFFFI_00897 2.3e-173 K helix_turn_helix, arabinose operon control protein
HMCDFFFI_00898 1.2e-104 K Helix-turn-helix domain
HMCDFFFI_00899 4.1e-87
HMCDFFFI_00901 2.9e-76 M LysM domain
HMCDFFFI_00902 2.1e-83
HMCDFFFI_00903 2.6e-158 htpX O Belongs to the peptidase M48B family
HMCDFFFI_00904 3.9e-96 lemA S LemA family
HMCDFFFI_00905 5.6e-195 ybiR P Citrate transporter
HMCDFFFI_00906 2e-70 S Iron-sulphur cluster biosynthesis
HMCDFFFI_00907 9.7e-193 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
HMCDFFFI_00908 4.2e-107 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
HMCDFFFI_00909 1.2e-17
HMCDFFFI_00910 4e-116
HMCDFFFI_00912 5.9e-217 ydaM M Glycosyl transferase
HMCDFFFI_00913 1.8e-177 G Glycosyl hydrolases family 8
HMCDFFFI_00914 1e-119 yfbR S HD containing hydrolase-like enzyme
HMCDFFFI_00915 7.9e-157 L HNH nucleases
HMCDFFFI_00916 1.2e-137 S Protein of unknown function (DUF805)
HMCDFFFI_00917 4.3e-138 glnQ E ABC transporter, ATP-binding protein
HMCDFFFI_00918 1.3e-290 glnP P ABC transporter permease
HMCDFFFI_00919 4e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
HMCDFFFI_00920 2e-64 yeaO S Protein of unknown function, DUF488
HMCDFFFI_00921 9.6e-125 terC P Integral membrane protein TerC family
HMCDFFFI_00922 3.2e-92 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
HMCDFFFI_00923 2.9e-133 cobB K SIR2 family
HMCDFFFI_00924 4.2e-86
HMCDFFFI_00925 2.5e-283 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
HMCDFFFI_00926 3.8e-181 S Alpha/beta hydrolase of unknown function (DUF915)
HMCDFFFI_00927 3e-147 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
HMCDFFFI_00928 4.4e-140 ypuA S Protein of unknown function (DUF1002)
HMCDFFFI_00929 4.9e-156 epsV 2.7.8.12 S glycosyl transferase family 2
HMCDFFFI_00930 2.5e-126 S Alpha/beta hydrolase family
HMCDFFFI_00931 1e-53
HMCDFFFI_00932 2.8e-182 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
HMCDFFFI_00933 2.4e-124 luxT K Bacterial regulatory proteins, tetR family
HMCDFFFI_00934 2.8e-135
HMCDFFFI_00935 2.8e-258 glnPH2 P ABC transporter permease
HMCDFFFI_00936 1.2e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
HMCDFFFI_00937 1.4e-223 S Cysteine-rich secretory protein family
HMCDFFFI_00938 4.2e-203 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
HMCDFFFI_00939 3.6e-113
HMCDFFFI_00940 6.3e-202 yibE S overlaps another CDS with the same product name
HMCDFFFI_00941 4.2e-128 yibF S overlaps another CDS with the same product name
HMCDFFFI_00942 7.3e-147 I alpha/beta hydrolase fold
HMCDFFFI_00943 0.0 G Belongs to the glycosyl hydrolase 31 family
HMCDFFFI_00944 5.4e-217 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
HMCDFFFI_00945 7.8e-61 K Helix-turn-helix XRE-family like proteins
HMCDFFFI_00946 1.1e-13
HMCDFFFI_00947 1.1e-32 hxlR K HxlR-like helix-turn-helix
HMCDFFFI_00948 1.4e-72 K LytTr DNA-binding domain
HMCDFFFI_00949 9.2e-69 S Protein of unknown function (DUF3021)
HMCDFFFI_00950 4.1e-48 V ABC transporter
HMCDFFFI_00951 3.3e-83 V ABC transporter
HMCDFFFI_00952 2e-106 S domain protein
HMCDFFFI_00953 8.2e-49 yyaR K Acetyltransferase (GNAT) domain
HMCDFFFI_00954 3.2e-72 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
HMCDFFFI_00955 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
HMCDFFFI_00956 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
HMCDFFFI_00957 5.6e-154 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
HMCDFFFI_00958 9.2e-201 tnpB L Putative transposase DNA-binding domain
HMCDFFFI_00959 4.2e-84 yqeG S HAD phosphatase, family IIIA
HMCDFFFI_00960 4.4e-200 yqeH S Ribosome biogenesis GTPase YqeH
HMCDFFFI_00961 2.6e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
HMCDFFFI_00962 4.3e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
HMCDFFFI_00963 5.3e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
HMCDFFFI_00964 1.2e-216 ylbM S Belongs to the UPF0348 family
HMCDFFFI_00965 2.1e-97 yceD S Uncharacterized ACR, COG1399
HMCDFFFI_00966 1.2e-126 K response regulator
HMCDFFFI_00967 1.3e-277 arlS 2.7.13.3 T Histidine kinase
HMCDFFFI_00968 8.5e-17
HMCDFFFI_00969 3.1e-50 S CAAX protease self-immunity
HMCDFFFI_00970 3.6e-224 S SLAP domain
HMCDFFFI_00971 1.2e-54 S Abi-like protein
HMCDFFFI_00972 1.5e-72 S Aminoacyl-tRNA editing domain
HMCDFFFI_00973 4.6e-161 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
HMCDFFFI_00974 2.9e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
HMCDFFFI_00975 1.4e-136 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
HMCDFFFI_00976 4.5e-58 yodB K Transcriptional regulator, HxlR family
HMCDFFFI_00978 4.4e-110 papP P ABC transporter, permease protein
HMCDFFFI_00979 2.8e-117 P ABC transporter permease
HMCDFFFI_00980 4.8e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
HMCDFFFI_00981 2.9e-162 cjaA ET ABC transporter substrate-binding protein
HMCDFFFI_00982 7.1e-200 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
HMCDFFFI_00983 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
HMCDFFFI_00984 4.9e-63 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
HMCDFFFI_00985 4.3e-169 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
HMCDFFFI_00986 9.3e-158 metQ1 P Belongs to the nlpA lipoprotein family
HMCDFFFI_00987 9.8e-121 yhiD S MgtC family
HMCDFFFI_00997 1.3e-40
HMCDFFFI_00998 8.1e-60 D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
HMCDFFFI_00999 4.4e-91 D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
HMCDFFFI_01001 1.5e-18
HMCDFFFI_01002 6.4e-23
HMCDFFFI_01003 1.5e-21
HMCDFFFI_01004 1.3e-19
HMCDFFFI_01006 1e-158 repB EP Plasmid replication protein
HMCDFFFI_01007 6.7e-19
HMCDFFFI_01008 5.5e-188 L Belongs to the 'phage' integrase family
HMCDFFFI_01009 2e-29
HMCDFFFI_01010 2.5e-06 S LPXTG cell wall anchor motif
HMCDFFFI_01011 1.7e-145 S Putative ABC-transporter type IV
HMCDFFFI_01012 2e-79 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S cob(I)alamin adenosyltransferase
HMCDFFFI_01013 4.7e-54 S ECF transporter, substrate-specific component
HMCDFFFI_01014 2.7e-24 S Domain of unknown function (DUF4430)
HMCDFFFI_01015 4.7e-43 S Domain of unknown function (DUF4430)
HMCDFFFI_01016 0.0 rtpR 1.1.98.6, 1.17.4.1, 1.17.4.2 F ribonucleoside-triphosphate reductase activity
HMCDFFFI_01017 0.0 oppA E ABC transporter substrate-binding protein
HMCDFFFI_01018 2.4e-176 K AI-2E family transporter
HMCDFFFI_01019 2.6e-103 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
HMCDFFFI_01020 2.4e-18
HMCDFFFI_01021 5.2e-248 G Major Facilitator
HMCDFFFI_01022 8.8e-81 E Zn peptidase
HMCDFFFI_01023 2.7e-41 ps115 K Helix-turn-helix XRE-family like proteins
HMCDFFFI_01024 6.8e-43
HMCDFFFI_01025 2e-52 S Bacteriocin helveticin-J
HMCDFFFI_01026 1.3e-37
HMCDFFFI_01027 4.4e-45
HMCDFFFI_01028 1.5e-227 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
HMCDFFFI_01029 1.9e-112 plsC 2.3.1.51 I Acyltransferase
HMCDFFFI_01030 4.3e-189 yabB 2.1.1.223 L Methyltransferase small domain
HMCDFFFI_01031 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
HMCDFFFI_01032 8.3e-185 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
HMCDFFFI_01033 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
HMCDFFFI_01034 5.3e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
HMCDFFFI_01035 5.4e-138 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
HMCDFFFI_01036 9.6e-136 cdsA 2.7.7.41 I Belongs to the CDS family
HMCDFFFI_01037 7.5e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
HMCDFFFI_01038 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
HMCDFFFI_01039 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
HMCDFFFI_01040 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
HMCDFFFI_01041 1.7e-197 nusA K Participates in both transcription termination and antitermination
HMCDFFFI_01042 8.8e-47 ylxR K Protein of unknown function (DUF448)
HMCDFFFI_01043 3.2e-47 rplGA J ribosomal protein
HMCDFFFI_01044 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
HMCDFFFI_01045 3e-60 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
HMCDFFFI_01046 9.8e-158 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
HMCDFFFI_01047 9.9e-177 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
HMCDFFFI_01048 4.5e-194 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
HMCDFFFI_01049 8e-68 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
HMCDFFFI_01050 0.0 dnaK O Heat shock 70 kDa protein
HMCDFFFI_01051 5.8e-203 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
HMCDFFFI_01052 9.3e-80 apfA 2.7.7.72, 3.6.1.61 F NUDIX domain
HMCDFFFI_01053 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
HMCDFFFI_01054 8.1e-112 srtA 3.4.22.70 M sortase family
HMCDFFFI_01055 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
HMCDFFFI_01056 2.8e-96 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
HMCDFFFI_01057 4.6e-89 oppA E ABC transporter substrate-binding protein
HMCDFFFI_01059 2.7e-202 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
HMCDFFFI_01060 2.5e-143 yfeO P Voltage gated chloride channel
HMCDFFFI_01061 4.7e-185 5.3.3.2 C FMN-dependent dehydrogenase
HMCDFFFI_01062 2.8e-52
HMCDFFFI_01063 4.7e-42
HMCDFFFI_01064 1.7e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
HMCDFFFI_01065 2.2e-199 ybeC E amino acid
HMCDFFFI_01066 4.1e-83 ybeC E amino acid
HMCDFFFI_01067 3.2e-155 S Sucrose-6F-phosphate phosphohydrolase
HMCDFFFI_01068 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
HMCDFFFI_01069 2.5e-39 rpmE2 J Ribosomal protein L31
HMCDFFFI_01070 1.3e-262 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
HMCDFFFI_01071 4.8e-250 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
HMCDFFFI_01072 1.7e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
HMCDFFFI_01073 1.7e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
HMCDFFFI_01074 3.4e-129 S (CBS) domain
HMCDFFFI_01075 1.5e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
HMCDFFFI_01076 5.1e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
HMCDFFFI_01077 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
HMCDFFFI_01078 1.6e-33 yabO J S4 domain protein
HMCDFFFI_01079 6.8e-60 divIC D Septum formation initiator
HMCDFFFI_01080 6.3e-63 yabR J S1 RNA binding domain
HMCDFFFI_01081 1.5e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
HMCDFFFI_01082 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
HMCDFFFI_01083 3.3e-166 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
HMCDFFFI_01084 2.3e-195 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
HMCDFFFI_01085 5.8e-299 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
HMCDFFFI_01087 1.6e-08
HMCDFFFI_01088 1.6e-08
HMCDFFFI_01089 1.6e-08
HMCDFFFI_01091 3.8e-81 yebR 1.8.4.14 T GAF domain-containing protein
HMCDFFFI_01092 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
HMCDFFFI_01093 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
HMCDFFFI_01094 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
HMCDFFFI_01095 3.6e-120 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
HMCDFFFI_01096 4.6e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
HMCDFFFI_01097 2.7e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
HMCDFFFI_01098 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
HMCDFFFI_01099 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
HMCDFFFI_01100 9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
HMCDFFFI_01101 9.6e-104 rplD J Forms part of the polypeptide exit tunnel
HMCDFFFI_01102 3.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
HMCDFFFI_01103 7.3e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
HMCDFFFI_01104 1.1e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
HMCDFFFI_01105 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
HMCDFFFI_01106 2.7e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
HMCDFFFI_01107 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
HMCDFFFI_01108 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
HMCDFFFI_01109 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
HMCDFFFI_01110 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
HMCDFFFI_01111 3.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
HMCDFFFI_01112 5.5e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
HMCDFFFI_01113 6.8e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
HMCDFFFI_01114 3.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
HMCDFFFI_01115 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
HMCDFFFI_01116 3.6e-55 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
HMCDFFFI_01117 4.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
HMCDFFFI_01118 2.3e-24 rpmD J Ribosomal protein L30
HMCDFFFI_01119 2.6e-71 rplO J Binds to the 23S rRNA
HMCDFFFI_01120 1.1e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
HMCDFFFI_01121 3.5e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
HMCDFFFI_01122 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
HMCDFFFI_01123 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
HMCDFFFI_01124 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
HMCDFFFI_01125 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
HMCDFFFI_01126 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
HMCDFFFI_01127 1.4e-60 rplQ J Ribosomal protein L17
HMCDFFFI_01128 3.7e-154 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
HMCDFFFI_01129 5.4e-158 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
HMCDFFFI_01130 6.5e-137 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
HMCDFFFI_01131 7.8e-151 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
HMCDFFFI_01132 5.9e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
HMCDFFFI_01133 7.9e-67 rpsI J Belongs to the universal ribosomal protein uS9 family
HMCDFFFI_01134 7.9e-222 L transposase, IS605 OrfB family
HMCDFFFI_01135 9.4e-97 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
HMCDFFFI_01136 1e-95
HMCDFFFI_01137 0.0 oppA3 E ABC transporter, substratebinding protein
HMCDFFFI_01138 9.9e-62 ypaA S Protein of unknown function (DUF1304)
HMCDFFFI_01139 1.5e-101 S Peptidase propeptide and YPEB domain
HMCDFFFI_01140 4.4e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
HMCDFFFI_01141 4.6e-171 coaA 2.7.1.33 F Pantothenic acid kinase
HMCDFFFI_01142 4.9e-99 E GDSL-like Lipase/Acylhydrolase
HMCDFFFI_01143 4.4e-74 yjcF S Acetyltransferase (GNAT) domain
HMCDFFFI_01144 1.7e-145 aatB ET ABC transporter substrate-binding protein
HMCDFFFI_01145 3.2e-107 glnQ 3.6.3.21 E ABC transporter
HMCDFFFI_01146 4.2e-110 glnP P ABC transporter permease
HMCDFFFI_01147 0.0 helD 3.6.4.12 L DNA helicase
HMCDFFFI_01148 5.6e-118 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
HMCDFFFI_01149 1.4e-126 pgm3 G Phosphoglycerate mutase family
HMCDFFFI_01150 1.4e-242 S response to antibiotic
HMCDFFFI_01151 1.9e-124
HMCDFFFI_01152 0.0 3.6.3.8 P P-type ATPase
HMCDFFFI_01153 8.7e-66 2.7.1.191 G PTS system fructose IIA component
HMCDFFFI_01154 3.6e-42
HMCDFFFI_01155 7.7e-09
HMCDFFFI_01156 4.2e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
HMCDFFFI_01157 7e-136 glvR K Helix-turn-helix domain, rpiR family
HMCDFFFI_01158 2.7e-268 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
HMCDFFFI_01159 1.1e-150
HMCDFFFI_01160 8.6e-24
HMCDFFFI_01161 1.5e-92 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
HMCDFFFI_01162 2e-157 S Archaea bacterial proteins of unknown function
HMCDFFFI_01163 8e-105 3.2.2.20 K acetyltransferase
HMCDFFFI_01165 3.4e-30 pac 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
HMCDFFFI_01166 5.3e-38 pac 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
HMCDFFFI_01167 9.1e-15 pac 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
HMCDFFFI_01168 0.0 O Belongs to the peptidase S8 family
HMCDFFFI_01169 2.4e-78 V ATPases associated with a variety of cellular activities
HMCDFFFI_01170 1.1e-148 S ABC-2 family transporter protein
HMCDFFFI_01171 8.6e-120 K helix_turn_helix, mercury resistance
HMCDFFFI_01172 1.2e-231 pbuG S permease
HMCDFFFI_01173 2.5e-40 relB L Addiction module antitoxin, RelB DinJ family
HMCDFFFI_01174 3.1e-16 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
HMCDFFFI_01176 7.9e-42 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
HMCDFFFI_01178 8e-61 K Transcriptional regulator
HMCDFFFI_01179 1.1e-226 S cog cog1373
HMCDFFFI_01180 1.3e-145 S haloacid dehalogenase-like hydrolase
HMCDFFFI_01181 5e-227 pbuG S permease
HMCDFFFI_01182 1e-27
HMCDFFFI_01183 5.7e-74 atkY K Penicillinase repressor
HMCDFFFI_01184 3.5e-64 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
HMCDFFFI_01185 3.1e-49 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
HMCDFFFI_01186 0.0 copA 3.6.3.54 P P-type ATPase
HMCDFFFI_01187 8.2e-114 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
HMCDFFFI_01188 1.2e-105
HMCDFFFI_01189 7e-248 EGP Sugar (and other) transporter
HMCDFFFI_01190 1.2e-18
HMCDFFFI_01191 6.6e-212
HMCDFFFI_01192 1.1e-82 L An automated process has identified a potential problem with this gene model
HMCDFFFI_01193 1.7e-42 rhaS6 K helix_turn_helix, arabinose operon control protein
HMCDFFFI_01194 5.3e-130 GK ROK family
HMCDFFFI_01195 3.5e-199 V MatE
HMCDFFFI_01196 1.5e-242 yisQ V MatE
HMCDFFFI_01197 1.7e-138 L An automated process has identified a potential problem with this gene model
HMCDFFFI_01198 3.7e-58 ps115 K Helix-turn-helix XRE-family like proteins
HMCDFFFI_01199 4e-32 E Zn peptidase
HMCDFFFI_01200 1.9e-289 clcA P chloride
HMCDFFFI_01201 2.1e-276 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
HMCDFFFI_01202 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
HMCDFFFI_01203 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
HMCDFFFI_01204 1.8e-251 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
HMCDFFFI_01205 8.4e-146 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
HMCDFFFI_01206 2.7e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
HMCDFFFI_01207 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
HMCDFFFI_01208 5.5e-245 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
HMCDFFFI_01209 2.4e-185 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
HMCDFFFI_01210 2.6e-35 yaaA S S4 domain protein YaaA
HMCDFFFI_01211 1.1e-209 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
HMCDFFFI_01212 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
HMCDFFFI_01213 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
HMCDFFFI_01214 9.4e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
HMCDFFFI_01215 4.5e-78 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
HMCDFFFI_01216 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
HMCDFFFI_01217 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
HMCDFFFI_01218 5.7e-69 rplI J Binds to the 23S rRNA
HMCDFFFI_01219 3.3e-253 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
HMCDFFFI_01220 3.5e-166 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
HMCDFFFI_01221 4.6e-166 degV S DegV family
HMCDFFFI_01222 3.9e-167 scrK 2.7.1.2, 2.7.1.4 GK ROK family
HMCDFFFI_01224 3.5e-15 S Transglycosylase associated protein
HMCDFFFI_01225 8e-227 I Protein of unknown function (DUF2974)
HMCDFFFI_01226 1.9e-250 L Putative transposase DNA-binding domain
HMCDFFFI_01227 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
HMCDFFFI_01228 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
HMCDFFFI_01229 1.7e-29 secG U Preprotein translocase
HMCDFFFI_01230 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
HMCDFFFI_01231 1.5e-178 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
HMCDFFFI_01232 2.6e-202 cpoA GT4 M Glycosyltransferase, group 1 family protein
HMCDFFFI_01233 1.4e-223 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
HMCDFFFI_01261 3.3e-74
HMCDFFFI_01262 0.0 kup P Transport of potassium into the cell
HMCDFFFI_01263 0.0 pepO 3.4.24.71 O Peptidase family M13
HMCDFFFI_01264 4.7e-211 yttB EGP Major facilitator Superfamily
HMCDFFFI_01265 3.4e-230 XK27_04775 S PAS domain
HMCDFFFI_01266 3.6e-103 S Iron-sulfur cluster assembly protein
HMCDFFFI_01267 8.7e-141 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
HMCDFFFI_01268 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
HMCDFFFI_01269 5.6e-255 yxbA 6.3.1.12 S ATP-grasp enzyme
HMCDFFFI_01270 0.0 asnB 6.3.5.4 E Asparagine synthase
HMCDFFFI_01271 4.2e-272 S Calcineurin-like phosphoesterase
HMCDFFFI_01272 8.7e-84
HMCDFFFI_01273 4.7e-105 tag 3.2.2.20 L glycosylase
HMCDFFFI_01274 2.2e-148 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
HMCDFFFI_01275 8.8e-118 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
HMCDFFFI_01276 4.1e-136 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
HMCDFFFI_01277 4.1e-151 phnD P Phosphonate ABC transporter
HMCDFFFI_01278 5.2e-84 uspA T universal stress protein
HMCDFFFI_01279 2.6e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
HMCDFFFI_01280 8.6e-87 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
HMCDFFFI_01281 3.6e-90 ntd 2.4.2.6 F Nucleoside
HMCDFFFI_01282 2.3e-08
HMCDFFFI_01283 4.5e-274 S Archaea bacterial proteins of unknown function
HMCDFFFI_01284 1.5e-61 S Bacterial toxin of type II toxin-antitoxin system, YafQ
HMCDFFFI_01285 9.8e-46
HMCDFFFI_01286 4.2e-46
HMCDFFFI_01287 2.5e-31
HMCDFFFI_01288 6.4e-21 L Transposase
HMCDFFFI_01290 1.2e-174 UW LPXTG-motif cell wall anchor domain protein
HMCDFFFI_01291 1.8e-164 UW LPXTG-motif cell wall anchor domain protein
HMCDFFFI_01292 9.6e-45 UW LPXTG-motif cell wall anchor domain protein
HMCDFFFI_01293 1.5e-80 UW LPXTG-motif cell wall anchor domain protein
HMCDFFFI_01294 1.9e-247 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
HMCDFFFI_01295 8.3e-99 J Acetyltransferase (GNAT) domain
HMCDFFFI_01296 1.4e-110 yjbF S SNARE associated Golgi protein
HMCDFFFI_01297 6.5e-153 I alpha/beta hydrolase fold
HMCDFFFI_01298 1.5e-158 hipB K Helix-turn-helix
HMCDFFFI_01299 6.2e-93 F Nucleoside 2-deoxyribosyltransferase
HMCDFFFI_01300 1.9e-261 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
HMCDFFFI_01301 2e-162
HMCDFFFI_01302 1.3e-25 K Acetyltransferase (GNAT) domain
HMCDFFFI_01304 0.0 ydgH S MMPL family
HMCDFFFI_01305 2.3e-99 yobS K Bacterial regulatory proteins, tetR family
HMCDFFFI_01306 1.1e-148 3.5.2.6 V Beta-lactamase enzyme family
HMCDFFFI_01307 1.8e-154 corA P CorA-like Mg2+ transporter protein
HMCDFFFI_01308 5.1e-240 G Bacterial extracellular solute-binding protein
HMCDFFFI_01309 2.4e-258 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
HMCDFFFI_01310 6.1e-146 gtsC P Binding-protein-dependent transport system inner membrane component
HMCDFFFI_01311 7.3e-158 gtsB P ABC-type sugar transport systems, permease components
HMCDFFFI_01312 1.9e-203 malK P ATPases associated with a variety of cellular activities
HMCDFFFI_01313 1.8e-283 pipD E Dipeptidase
HMCDFFFI_01314 1.9e-158 endA F DNA RNA non-specific endonuclease
HMCDFFFI_01315 9.4e-183 dnaQ 2.7.7.7 L EXOIII
HMCDFFFI_01316 2.4e-158 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
HMCDFFFI_01317 3e-116 yviA S Protein of unknown function (DUF421)
HMCDFFFI_01318 4.1e-72 S Protein of unknown function (DUF3290)
HMCDFFFI_01319 9e-141 pnuC H nicotinamide mononucleotide transporter
HMCDFFFI_01320 2e-12
HMCDFFFI_01321 1.1e-138 S PAS domain
HMCDFFFI_01322 2.4e-279 V ABC transporter transmembrane region
HMCDFFFI_01323 2.1e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
HMCDFFFI_01324 3.3e-132 T Transcriptional regulatory protein, C terminal
HMCDFFFI_01325 1.5e-247 T GHKL domain
HMCDFFFI_01326 2.9e-88 S Peptidase propeptide and YPEB domain
HMCDFFFI_01327 9.2e-99 S Peptidase propeptide and YPEB domain
HMCDFFFI_01328 3.7e-96 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
HMCDFFFI_01329 6.2e-76 yybA 2.3.1.57 K Transcriptional regulator
HMCDFFFI_01330 5.4e-239 V ABC transporter transmembrane region
HMCDFFFI_01331 2.4e-55 cdd 2.4.2.4, 3.5.4.5 F Cytidine and deoxycytidylate deaminase zinc-binding region
HMCDFFFI_01332 2.7e-118 fbiB 6.3.2.12, 6.3.2.17, 6.3.2.31, 6.3.2.34 S F420-0:Gamma-glutamyl ligase
HMCDFFFI_01333 4e-38 S AAA domain
HMCDFFFI_01334 7.6e-143 2.4.2.3 F Phosphorylase superfamily
HMCDFFFI_01335 3.7e-145 2.4.2.3 F Phosphorylase superfamily
HMCDFFFI_01336 9e-150 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
HMCDFFFI_01337 2e-80 yagE E amino acid
HMCDFFFI_01338 2.9e-28 yagE E amino acid
HMCDFFFI_01339 1.8e-72 yagE E Amino acid permease
HMCDFFFI_01340 1.9e-86 3.4.21.96 S SLAP domain
HMCDFFFI_01341 3.9e-159 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
HMCDFFFI_01342 1.1e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
HMCDFFFI_01343 1.2e-107 hlyIII S protein, hemolysin III
HMCDFFFI_01344 5.7e-147 DegV S Uncharacterised protein, DegV family COG1307
HMCDFFFI_01345 7.1e-36 yozE S Belongs to the UPF0346 family
HMCDFFFI_01346 1e-67 yjcE P NhaP-type Na H and K H
HMCDFFFI_01347 1.7e-185 yjcE P Sodium proton antiporter
HMCDFFFI_01348 2.5e-155 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
HMCDFFFI_01349 9.8e-135 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
HMCDFFFI_01350 1.3e-151 dprA LU DNA protecting protein DprA
HMCDFFFI_01351 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
HMCDFFFI_01352 2.7e-249 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
HMCDFFFI_01353 4.2e-140 xerC D Phage integrase, N-terminal SAM-like domain
HMCDFFFI_01354 1.9e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
HMCDFFFI_01355 1.2e-234 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
HMCDFFFI_01356 4.8e-181 lacX 5.1.3.3 G Aldose 1-epimerase
HMCDFFFI_01357 3.8e-60 C Aldo keto reductase
HMCDFFFI_01358 4.1e-63 M LysM domain protein
HMCDFFFI_01359 1.1e-152 xerD L Phage integrase, N-terminal SAM-like domain
HMCDFFFI_01360 7.9e-67 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
HMCDFFFI_01361 9.2e-65 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
HMCDFFFI_01362 1.1e-12 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
HMCDFFFI_01363 2e-88 mmuP E amino acid
HMCDFFFI_01364 2e-274 pepV 3.5.1.18 E dipeptidase PepV
HMCDFFFI_01365 1.6e-93 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
HMCDFFFI_01366 1.7e-284 E Amino acid permease
HMCDFFFI_01367 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
HMCDFFFI_01368 6.7e-245 ynbB 4.4.1.1 P aluminum resistance
HMCDFFFI_01369 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
HMCDFFFI_01370 2.9e-81 C Flavodoxin
HMCDFFFI_01371 3.6e-54
HMCDFFFI_01372 3e-26
HMCDFFFI_01373 4.4e-69 5.4.2.11 G Phosphoglycerate mutase family
HMCDFFFI_01376 6.3e-154 M Belongs to the glycosyl hydrolase 28 family
HMCDFFFI_01377 1.7e-78 K Acetyltransferase (GNAT) domain
HMCDFFFI_01378 9.7e-106 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
HMCDFFFI_01379 5.6e-118 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
HMCDFFFI_01380 3.8e-134 S membrane transporter protein
HMCDFFFI_01381 5.8e-126 gpmB G Belongs to the phosphoglycerate mutase family
HMCDFFFI_01382 5.1e-162 czcD P cation diffusion facilitator family transporter
HMCDFFFI_01383 1.4e-23
HMCDFFFI_01384 1.2e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
HMCDFFFI_01385 1.1e-183 S AAA domain
HMCDFFFI_01386 2.3e-50
HMCDFFFI_01387 6e-260 pepC 3.4.22.40 E Peptidase C1-like family
HMCDFFFI_01388 6.4e-53
HMCDFFFI_01389 1.8e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
HMCDFFFI_01390 2.7e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
HMCDFFFI_01391 1.9e-291 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
HMCDFFFI_01392 2e-277 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
HMCDFFFI_01393 1.6e-76 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
HMCDFFFI_01394 1.7e-139 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
HMCDFFFI_01395 4.2e-95 sigH K Belongs to the sigma-70 factor family
HMCDFFFI_01396 1.7e-34
HMCDFFFI_01397 4.5e-288 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
HMCDFFFI_01398 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
HMCDFFFI_01399 3.6e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
HMCDFFFI_01400 1.1e-101 nusG K Participates in transcription elongation, termination and antitermination
HMCDFFFI_01401 1.2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
HMCDFFFI_01402 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
HMCDFFFI_01403 7.3e-158 pstS P Phosphate
HMCDFFFI_01404 3.9e-163 pstC P probably responsible for the translocation of the substrate across the membrane
HMCDFFFI_01405 1.2e-155 pstA P Phosphate transport system permease protein PstA
HMCDFFFI_01406 5e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
HMCDFFFI_01407 1.7e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
HMCDFFFI_01408 2.2e-117 phoU P Plays a role in the regulation of phosphate uptake
HMCDFFFI_01409 2.2e-61 L An automated process has identified a potential problem with this gene model
HMCDFFFI_01410 2.8e-07 GT2,GT4 M family 8
HMCDFFFI_01411 7e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
HMCDFFFI_01412 1.8e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
HMCDFFFI_01413 6.6e-140 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
HMCDFFFI_01414 1.3e-116 rsmC 2.1.1.172 J Methyltransferase
HMCDFFFI_01415 9e-26
HMCDFFFI_01416 2.2e-90 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
HMCDFFFI_01417 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
HMCDFFFI_01418 9.4e-43 2.4.1.58 GT8 M family 8
HMCDFFFI_01419 1e-34 M lipopolysaccharide 3-alpha-galactosyltransferase activity
HMCDFFFI_01420 2.8e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
HMCDFFFI_01421 1.6e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
HMCDFFFI_01422 1.1e-34 S Protein of unknown function (DUF2508)
HMCDFFFI_01423 1.6e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
HMCDFFFI_01424 8.9e-53 yaaQ S Cyclic-di-AMP receptor
HMCDFFFI_01425 3e-156 holB 2.7.7.7 L DNA polymerase III
HMCDFFFI_01426 1.8e-59 yabA L Involved in initiation control of chromosome replication
HMCDFFFI_01427 7.9e-157 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
HMCDFFFI_01428 1.5e-135 fat 3.1.2.21 I Acyl-ACP thioesterase
HMCDFFFI_01429 2.4e-87 S ECF transporter, substrate-specific component
HMCDFFFI_01430 2.4e-133 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
HMCDFFFI_01431 2.1e-96 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
HMCDFFFI_01432 2.5e-197 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
HMCDFFFI_01433 1.2e-230 L COG3547 Transposase and inactivated derivatives
HMCDFFFI_01434 7.2e-37
HMCDFFFI_01435 1.7e-154 L COG2963 Transposase and inactivated derivatives
HMCDFFFI_01436 0.0 uup S ABC transporter, ATP-binding protein
HMCDFFFI_01437 5.8e-112 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
HMCDFFFI_01438 3.9e-184 scrR K helix_turn _helix lactose operon repressor
HMCDFFFI_01439 3.7e-295 scrB 3.2.1.26 GH32 G invertase
HMCDFFFI_01440 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
HMCDFFFI_01441 2.3e-181 M CHAP domain
HMCDFFFI_01442 3e-74
HMCDFFFI_01443 1.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
HMCDFFFI_01444 2.6e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
HMCDFFFI_01445 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
HMCDFFFI_01446 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
HMCDFFFI_01447 1.7e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
HMCDFFFI_01448 1.1e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
HMCDFFFI_01449 9.6e-41 yajC U Preprotein translocase
HMCDFFFI_01450 3.6e-287 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
HMCDFFFI_01451 5.9e-216 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
HMCDFFFI_01452 4.7e-182 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
HMCDFFFI_01453 4e-227 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
HMCDFFFI_01454 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
HMCDFFFI_01455 2e-42 yrzL S Belongs to the UPF0297 family
HMCDFFFI_01456 6.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
HMCDFFFI_01457 1.1e-50 yrzB S Belongs to the UPF0473 family
HMCDFFFI_01458 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
HMCDFFFI_01459 3.5e-54 trxA O Belongs to the thioredoxin family
HMCDFFFI_01460 9.7e-59 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
HMCDFFFI_01461 1.1e-71 yslB S Protein of unknown function (DUF2507)
HMCDFFFI_01462 1.7e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
HMCDFFFI_01463 1.6e-111 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
HMCDFFFI_01464 8.1e-146 ykuT M mechanosensitive ion channel
HMCDFFFI_01465 9.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
HMCDFFFI_01466 1.3e-36
HMCDFFFI_01467 8.3e-215 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
HMCDFFFI_01468 4.9e-182 ccpA K catabolite control protein A
HMCDFFFI_01469 4e-267 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
HMCDFFFI_01470 4.3e-55
HMCDFFFI_01471 3.1e-275 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
HMCDFFFI_01472 6.5e-102 yutD S Protein of unknown function (DUF1027)
HMCDFFFI_01473 6.9e-144 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
HMCDFFFI_01474 3.1e-99 S Protein of unknown function (DUF1461)
HMCDFFFI_01475 2.3e-116 dedA S SNARE-like domain protein
HMCDFFFI_01476 8.3e-182 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
HMCDFFFI_01477 1.2e-205 L COG3547 Transposase and inactivated derivatives
HMCDFFFI_01478 2.1e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
HMCDFFFI_01479 1.8e-95 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
HMCDFFFI_01480 1.1e-175 phoH T phosphate starvation-inducible protein PhoH
HMCDFFFI_01481 1.6e-71 yqeY S YqeY-like protein
HMCDFFFI_01482 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
HMCDFFFI_01483 1.2e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
HMCDFFFI_01484 1.4e-164 cas2 2.7.7.7 L CRISPR-associated protein (Cas_Cas2CT1978)
HMCDFFFI_01485 3.9e-173 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
HMCDFFFI_01486 1.3e-122 casE S CRISPR_assoc
HMCDFFFI_01487 2.6e-132 casD S CRISPR-associated protein (Cas_Cas5)
HMCDFFFI_01488 4.9e-199 casC L CT1975-like protein
HMCDFFFI_01489 8.8e-110 casB S CRISPR-associated protein Cse2 (CRISPR_cse2)
HMCDFFFI_01490 0.0 casA L the current gene model (or a revised gene model) may contain a frame shift
HMCDFFFI_01491 0.0 cas3 L CRISPR-associated helicase cas3
HMCDFFFI_01492 1.1e-46
HMCDFFFI_01494 1.3e-45 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
HMCDFFFI_01495 2.4e-46 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
HMCDFFFI_01496 7.7e-97 dps P Belongs to the Dps family
HMCDFFFI_01497 1e-34 copZ C Heavy-metal-associated domain
HMCDFFFI_01498 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
HMCDFFFI_01499 1.6e-102
HMCDFFFI_01500 2e-117 S Peptidase family M23
HMCDFFFI_01501 1.2e-105 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
HMCDFFFI_01502 6.3e-77
HMCDFFFI_01503 3.9e-159 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
HMCDFFFI_01504 2.1e-117
HMCDFFFI_01505 2.5e-158 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
HMCDFFFI_01506 5.6e-220 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
HMCDFFFI_01507 7.3e-283 thrC 4.2.3.1 E Threonine synthase
HMCDFFFI_01508 2.3e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
HMCDFFFI_01509 8.2e-102 pgm3 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
HMCDFFFI_01510 0.0 L PLD-like domain
HMCDFFFI_01511 7.7e-40 S SnoaL-like domain
HMCDFFFI_01512 8.4e-70 hipB K sequence-specific DNA binding
HMCDFFFI_01513 5.2e-21 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
HMCDFFFI_01514 7.1e-74
HMCDFFFI_01515 9.5e-281 V ABC-type multidrug transport system, ATPase and permease components
HMCDFFFI_01516 2e-286 V ABC-type multidrug transport system, ATPase and permease components
HMCDFFFI_01517 3.7e-27 L Transposase
HMCDFFFI_01518 3.8e-260 emrY EGP Major facilitator Superfamily
HMCDFFFI_01519 4e-215 mdtG EGP Major facilitator Superfamily
HMCDFFFI_01520 2.4e-136
HMCDFFFI_01521 2.6e-103
HMCDFFFI_01522 6e-210 pepA E M42 glutamyl aminopeptidase
HMCDFFFI_01523 7.6e-310 ybiT S ABC transporter, ATP-binding protein
HMCDFFFI_01524 1.3e-173 S Aldo keto reductase
HMCDFFFI_01525 6.1e-151
HMCDFFFI_01526 8e-241 steT E amino acid
HMCDFFFI_01527 9.5e-242 steT E amino acid
HMCDFFFI_01528 4.9e-130 yfeJ 6.3.5.2 F glutamine amidotransferase
HMCDFFFI_01529 6.4e-148 glnH ET ABC transporter
HMCDFFFI_01530 1.4e-80 K Transcriptional regulator, MarR family
HMCDFFFI_01531 1.7e-310 XK27_09600 V ABC transporter, ATP-binding protein
HMCDFFFI_01532 0.0 V ABC transporter transmembrane region
HMCDFFFI_01533 3.8e-102 S ABC-type cobalt transport system, permease component
HMCDFFFI_01534 3e-254 G MFS/sugar transport protein
HMCDFFFI_01535 1.3e-53 ps301 K sequence-specific DNA binding
HMCDFFFI_01536 6.3e-29 S Motility quorum-sensing regulator, toxin of MqsA
HMCDFFFI_01537 3.6e-114 udk 2.7.1.48 F Zeta toxin
HMCDFFFI_01538 1.9e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
HMCDFFFI_01539 2e-149 glnH ET ABC transporter substrate-binding protein
HMCDFFFI_01540 9.7e-91 gluC P ABC transporter permease
HMCDFFFI_01541 4.7e-109 glnP P ABC transporter permease
HMCDFFFI_01542 1.5e-164 S Protein of unknown function (DUF2974)
HMCDFFFI_01543 1.2e-114 L Resolvase, N-terminal
HMCDFFFI_01544 8.2e-51 L Putative transposase DNA-binding domain
HMCDFFFI_01545 1.2e-157 L Putative transposase DNA-binding domain
HMCDFFFI_01546 1.6e-129 L PFAM transposase IS116 IS110 IS902
HMCDFFFI_01547 1.4e-82 srlM 2.7.1.200, 2.7.1.202 GKT Mga helix-turn-helix domain
HMCDFFFI_01548 3.2e-57 gutM K Glucitol operon activator protein (GutM)
HMCDFFFI_01549 8.3e-91 srlA G PTS system enzyme II sorbitol-specific factor
HMCDFFFI_01550 1.4e-144 srlE 2.7.1.198 G Sorbitol phosphotransferase enzyme II N-terminus
HMCDFFFI_01551 7.9e-45 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
HMCDFFFI_01552 1.2e-28 L Transposase
HMCDFFFI_01553 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
HMCDFFFI_01554 4.5e-157 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
HMCDFFFI_01555 2.5e-104 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
HMCDFFFI_01556 4.6e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
HMCDFFFI_01557 3e-251 dnaB L Replication initiation and membrane attachment
HMCDFFFI_01558 4.8e-168 dnaI L Primosomal protein DnaI
HMCDFFFI_01559 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
HMCDFFFI_01560 1.7e-85
HMCDFFFI_01561 3.3e-175 S Domain of unknown function (DUF389)
HMCDFFFI_01562 1.3e-62 L COG2826 Transposase and inactivated derivatives, IS30 family
HMCDFFFI_01563 1e-72 L COG2826 Transposase and inactivated derivatives, IS30 family
HMCDFFFI_01564 9.6e-41 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
HMCDFFFI_01565 2.7e-40 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
HMCDFFFI_01566 7.7e-39 S Aldo keto reductase
HMCDFFFI_01567 3.7e-27 L Transposase
HMCDFFFI_01568 2.1e-95
HMCDFFFI_01569 2.1e-117 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
HMCDFFFI_01570 9e-98
HMCDFFFI_01571 2e-109 K LysR substrate binding domain
HMCDFFFI_01572 1e-20
HMCDFFFI_01573 3.3e-222 S Sterol carrier protein domain
HMCDFFFI_01574 1.7e-96 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
HMCDFFFI_01575 1.1e-107 argF 2.1.3.3, 2.7.2.2 E Belongs to the carbamate kinase family
HMCDFFFI_01576 1.2e-47 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
HMCDFFFI_01577 2.3e-66 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
HMCDFFFI_01578 4.7e-235 arcA 3.5.3.6 E Arginine
HMCDFFFI_01579 6.9e-137 lysR5 K LysR substrate binding domain
HMCDFFFI_01580 0.0 mgtA 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
HMCDFFFI_01581 5.4e-09 S Metal binding domain of Ada
HMCDFFFI_01583 1.5e-12 ybhL S Belongs to the BI1 family
HMCDFFFI_01584 6.5e-34 ybhL S Belongs to the BI1 family
HMCDFFFI_01585 1.3e-169 S Bacterial protein of unknown function (DUF871)
HMCDFFFI_01586 1.9e-74
HMCDFFFI_01587 1.9e-40
HMCDFFFI_01588 8.7e-119 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
HMCDFFFI_01589 1.2e-288 hsdM 2.1.1.72 V type I restriction-modification system
HMCDFFFI_01590 0.0 hsdR 3.1.21.3 L Type I restriction enzyme R protein N terminus (HSDR_N)
HMCDFFFI_01591 7.8e-42 S Domain of unknown function (DUF4393)
HMCDFFFI_01592 6.5e-77 comEA L Competence protein ComEA
HMCDFFFI_01593 9.6e-189 ylbL T Belongs to the peptidase S16 family
HMCDFFFI_01594 3.6e-82 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
HMCDFFFI_01595 1.7e-96 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
HMCDFFFI_01596 5.1e-54 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
HMCDFFFI_01597 5.4e-212 ftsW D Belongs to the SEDS family
HMCDFFFI_01598 0.0 typA T GTP-binding protein TypA
HMCDFFFI_01599 4e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
HMCDFFFI_01600 3.2e-33 ykzG S Belongs to the UPF0356 family
HMCDFFFI_01601 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
HMCDFFFI_01602 4.6e-182 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
HMCDFFFI_01603 5.4e-295 L Nuclease-related domain
HMCDFFFI_01604 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
HMCDFFFI_01605 8.3e-106 S Repeat protein
HMCDFFFI_01606 3.9e-127 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
HMCDFFFI_01607 4.6e-221 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
HMCDFFFI_01608 2.2e-57 XK27_04120 S Putative amino acid metabolism
HMCDFFFI_01609 1.9e-209 iscS 2.8.1.7 E Aminotransferase class V
HMCDFFFI_01610 2.2e-112 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
HMCDFFFI_01611 2.1e-38
HMCDFFFI_01612 9.8e-103 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
HMCDFFFI_01613 3.6e-31 cspA K 'Cold-shock' DNA-binding domain
HMCDFFFI_01614 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
HMCDFFFI_01615 2.8e-74 gpsB D DivIVA domain protein
HMCDFFFI_01616 7.4e-149 ylmH S S4 domain protein
HMCDFFFI_01617 1.7e-45 yggT S YGGT family
HMCDFFFI_01618 7.3e-74 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
HMCDFFFI_01619 1.8e-219 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
HMCDFFFI_01620 2.3e-243 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
HMCDFFFI_01621 1.2e-152 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
HMCDFFFI_01622 4.4e-208 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
HMCDFFFI_01623 7.3e-261 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
HMCDFFFI_01624 1.5e-175 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
HMCDFFFI_01625 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
HMCDFFFI_01626 4.1e-54 ftsL D Cell division protein FtsL
HMCDFFFI_01627 1.3e-176 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
HMCDFFFI_01628 6.3e-78 mraZ K Belongs to the MraZ family
HMCDFFFI_01629 6.4e-54 S Protein of unknown function (DUF3397)
HMCDFFFI_01631 2.7e-94 mreD
HMCDFFFI_01632 8.8e-148 mreC M Involved in formation and maintenance of cell shape
HMCDFFFI_01633 1.8e-176 mreB D cell shape determining protein MreB
HMCDFFFI_01634 2.3e-108 radC L DNA repair protein
HMCDFFFI_01635 2e-126 S Haloacid dehalogenase-like hydrolase
HMCDFFFI_01636 1.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
HMCDFFFI_01637 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
HMCDFFFI_01638 1.3e-51
HMCDFFFI_01639 1.1e-132 S AAA domain, putative AbiEii toxin, Type IV TA system
HMCDFFFI_01640 0.0 3.6.3.8 P P-type ATPase
HMCDFFFI_01642 2.9e-44
HMCDFFFI_01643 3.4e-94 S Protein of unknown function (DUF3990)
HMCDFFFI_01644 1.4e-170 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
HMCDFFFI_01645 2.1e-65 2.4.1.83 GT2 S GtrA-like protein
HMCDFFFI_01646 9.1e-28 3.6.4.12 S PD-(D/E)XK nuclease family transposase
HMCDFFFI_01647 8.3e-120 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
HMCDFFFI_01648 4.7e-154
HMCDFFFI_01649 8.1e-135 K Helix-turn-helix XRE-family like proteins
HMCDFFFI_01650 2.1e-111
HMCDFFFI_01654 1.7e-135 S SLAP domain
HMCDFFFI_01655 2e-202 L COG2826 Transposase and inactivated derivatives, IS30 family
HMCDFFFI_01656 9.8e-127 S ABC-2 family transporter protein
HMCDFFFI_01657 3e-170 bcrA V ABC transporter
HMCDFFFI_01658 2.7e-106 K Psort location CytoplasmicMembrane, score
HMCDFFFI_01659 1.3e-30 S Filamentation induced by cAMP protein fic
HMCDFFFI_01660 4.4e-58 K Psort location Cytoplasmic, score
HMCDFFFI_01661 4.9e-31 srlM 2.7.1.200, 2.7.1.202 GKT Mga helix-turn-helix domain
HMCDFFFI_01662 2.9e-129 IQ NAD dependent epimerase/dehydratase family
HMCDFFFI_01663 5.6e-61 EG COG COG2610 H gluconate symporter and related permeases
HMCDFFFI_01664 3.4e-19 4.2.1.5 M Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
HMCDFFFI_01665 1.1e-258 lysC 2.7.2.4 E Belongs to the aspartokinase family
HMCDFFFI_01666 2.3e-192 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
HMCDFFFI_01667 6.2e-127 yjeM E Amino Acid
HMCDFFFI_01668 3.4e-14
HMCDFFFI_01669 3.7e-105 engB D Necessary for normal cell division and for the maintenance of normal septation
HMCDFFFI_01670 2.9e-232 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
HMCDFFFI_01671 4e-216 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
HMCDFFFI_01672 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
HMCDFFFI_01673 8.3e-151
HMCDFFFI_01674 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
HMCDFFFI_01675 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
HMCDFFFI_01676 6.7e-35 rpsT J Binds directly to 16S ribosomal RNA
HMCDFFFI_01677 2.6e-175 holA 2.7.7.7 L DNA polymerase III delta subunit
HMCDFFFI_01678 0.0 comEC S Competence protein ComEC
HMCDFFFI_01679 1.6e-227 L COG3547 Transposase and inactivated derivatives
HMCDFFFI_01680 3.7e-27 L Transposase
HMCDFFFI_01681 5.7e-230 L Transposase
HMCDFFFI_01682 1.3e-38 oppA E ABC transporter substrate-binding protein
HMCDFFFI_01683 9.9e-160 oppA E ABC transporter substrate-binding protein
HMCDFFFI_01684 4.9e-90 ymdB S Macro domain protein
HMCDFFFI_01685 2.3e-09
HMCDFFFI_01686 6.3e-28
HMCDFFFI_01688 7.3e-67 K Helix-turn-helix XRE-family like proteins
HMCDFFFI_01689 3.3e-147 malG P ABC transporter permease
HMCDFFFI_01690 3.1e-248 malF P Binding-protein-dependent transport system inner membrane component
HMCDFFFI_01691 1.3e-213 malE G Bacterial extracellular solute-binding protein
HMCDFFFI_01692 4.7e-210 msmX P Belongs to the ABC transporter superfamily
HMCDFFFI_01693 1.4e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
HMCDFFFI_01694 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
HMCDFFFI_01695 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
HMCDFFFI_01696 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
HMCDFFFI_01697 4.8e-78 S PAS domain
HMCDFFFI_01698 3.7e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
HMCDFFFI_01699 8.2e-179 yvdE K helix_turn _helix lactose operon repressor
HMCDFFFI_01700 6.3e-145 ptp2 3.1.3.48 T Tyrosine phosphatase family
HMCDFFFI_01701 1.7e-292 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
HMCDFFFI_01702 9.6e-152 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
HMCDFFFI_01703 8.6e-21
HMCDFFFI_01704 8.8e-131 K Helix-turn-helix XRE-family like proteins
HMCDFFFI_01705 3.2e-197 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
HMCDFFFI_01706 2.3e-59 hxlR K Transcriptional regulator, HxlR family
HMCDFFFI_01707 1.2e-19 yjdF S Protein of unknown function (DUF2992)
HMCDFFFI_01708 3e-56 ps115 K Helix-turn-helix XRE-family like proteins
HMCDFFFI_01711 1.2e-151 S Sucrose-6F-phosphate phosphohydrolase
HMCDFFFI_01712 0.0 oppA E ABC transporter
HMCDFFFI_01713 1.8e-231 Q Imidazolonepropionase and related amidohydrolases
HMCDFFFI_01714 6.8e-221 3.5.1.47 S Peptidase dimerisation domain
HMCDFFFI_01715 9.3e-131 S Protein of unknown function (DUF3100)
HMCDFFFI_01716 9.7e-83 S An automated process has identified a potential problem with this gene model
HMCDFFFI_01717 2.9e-50 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
HMCDFFFI_01718 9.1e-139 L COG2826 Transposase and inactivated derivatives, IS30 family
HMCDFFFI_01719 2e-113 M Iron Transport-associated domain
HMCDFFFI_01720 2.5e-158 isdE P Periplasmic binding protein
HMCDFFFI_01721 1.1e-148 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
HMCDFFFI_01722 4e-139 fhuC 3.6.3.34 HP abc transporter atp-binding protein
HMCDFFFI_01723 6.7e-44 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
HMCDFFFI_01724 1.2e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
HMCDFFFI_01725 1.3e-38 S RelB antitoxin
HMCDFFFI_01726 5.2e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
HMCDFFFI_01727 0.0 S membrane
HMCDFFFI_01728 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
HMCDFFFI_01729 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
HMCDFFFI_01730 1.4e-96 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
HMCDFFFI_01731 5.3e-119 gluP 3.4.21.105 S Rhomboid family
HMCDFFFI_01732 9.7e-36 yqgQ S Bacterial protein of unknown function (DUF910)
HMCDFFFI_01733 1.5e-65 yqhL P Rhodanese-like protein
HMCDFFFI_01734 9.2e-170 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
HMCDFFFI_01735 2e-225 ynbB 4.4.1.1 P aluminum resistance
HMCDFFFI_01736 2e-263 glnA 6.3.1.2 E glutamine synthetase
HMCDFFFI_01737 1e-170
HMCDFFFI_01738 6.2e-145
HMCDFFFI_01739 2.1e-111 L Transposase
HMCDFFFI_01740 9e-124 L Transposase
HMCDFFFI_01741 1.4e-62
HMCDFFFI_01742 4.5e-260 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
HMCDFFFI_01743 0.0 O Belongs to the peptidase S8 family
HMCDFFFI_01744 8.3e-174 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
HMCDFFFI_01745 1.9e-93 dhaL 2.7.1.121 S Dak2
HMCDFFFI_01746 1.3e-55 dhaM 2.7.1.121 S PTS system fructose IIA component
HMCDFFFI_01747 2.2e-120 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
HMCDFFFI_01748 1.9e-16 3.6.4.12 S PD-(D/E)XK nuclease family transposase
HMCDFFFI_01749 8.4e-71 3.6.4.12 S PD-(D/E)XK nuclease family transposase
HMCDFFFI_01750 8.8e-111 K LysR family
HMCDFFFI_01751 3.7e-273 1.3.5.4 C FMN_bind
HMCDFFFI_01752 8.3e-109 K LysR family
HMCDFFFI_01753 9.2e-227 P Sodium:sulfate symporter transmembrane region
HMCDFFFI_01754 1e-275 1.3.5.4 C FMN_bind
HMCDFFFI_01755 1.4e-131 msmX P Belongs to the ABC transporter superfamily
HMCDFFFI_01756 5.5e-85 bgl 3.2.1.21, 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
HMCDFFFI_01757 1.8e-83 S Putative inner membrane protein (DUF1819)
HMCDFFFI_01758 1.3e-89 S Domain of unknown function (DUF1788)
HMCDFFFI_01759 7.3e-223 FbpA 3.1.21.3, 3.2.1.170 GH38 K RNA-binding protein homologous to eukaryotic snRNP
HMCDFFFI_01760 1.3e-301 2.1.1.72 LV Eco57I restriction-modification methylase
HMCDFFFI_01763 2.4e-12
HMCDFFFI_01764 2.7e-46 S Domain of unknown function (DUF4417)
HMCDFFFI_01765 3e-30 E IrrE N-terminal-like domain
HMCDFFFI_01766 1.4e-29 K Helix-turn-helix
HMCDFFFI_01767 0.0 S PglZ domain
HMCDFFFI_01768 3.7e-27 L Transposase
HMCDFFFI_01769 2e-42 S RelB antitoxin
HMCDFFFI_01770 3.8e-53
HMCDFFFI_01771 2.3e-218 KQ helix_turn_helix, mercury resistance
HMCDFFFI_01772 8.3e-209 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
HMCDFFFI_01773 1.1e-161 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
HMCDFFFI_01774 3.7e-116 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
HMCDFFFI_01775 2.1e-177 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
HMCDFFFI_01778 9.4e-15 U Preprotein translocase subunit SecB
HMCDFFFI_01779 5.7e-62
HMCDFFFI_01780 4.9e-52
HMCDFFFI_01781 7.5e-28 L Transposase
HMCDFFFI_01782 5.9e-47 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
HMCDFFFI_01783 6.5e-44 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
HMCDFFFI_01784 1.5e-68 L RelB antitoxin
HMCDFFFI_01786 3.2e-132 cobQ S glutamine amidotransferase
HMCDFFFI_01787 1.6e-82 M NlpC/P60 family
HMCDFFFI_01790 1.9e-35
HMCDFFFI_01791 1e-165 EG EamA-like transporter family
HMCDFFFI_01792 3.1e-102 L PFAM Integrase catalytic region
HMCDFFFI_01793 2.6e-41 L Helix-turn-helix domain
HMCDFFFI_01794 7e-167 EG EamA-like transporter family
HMCDFFFI_01795 5.3e-116 yicL EG EamA-like transporter family
HMCDFFFI_01796 5.7e-107
HMCDFFFI_01797 5.4e-110
HMCDFFFI_01798 5.8e-186 XK27_05540 S DUF218 domain
HMCDFFFI_01799 2.3e-262 yheS_2 S ATPases associated with a variety of cellular activities
HMCDFFFI_01800 7.7e-88
HMCDFFFI_01801 3.9e-57
HMCDFFFI_01802 1.2e-28 S Protein conserved in bacteria
HMCDFFFI_01803 8.1e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
HMCDFFFI_01804 8.2e-230 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
HMCDFFFI_01805 7e-189 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
HMCDFFFI_01808 3.9e-206 4.2.1.126 S Bacterial protein of unknown function (DUF871)
HMCDFFFI_01809 4.9e-190 asnA 6.3.1.1 F aspartate--ammonia ligase
HMCDFFFI_01810 8.5e-67 L An automated process has identified a potential problem with this gene model
HMCDFFFI_01811 3.7e-27 L Transposase
HMCDFFFI_01812 3.7e-27 L Transposase
HMCDFFFI_01813 1.5e-36
HMCDFFFI_01815 3.4e-123 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
HMCDFFFI_01816 2.5e-86 K GNAT family
HMCDFFFI_01817 1.3e-55 XK27_00915 C Luciferase-like monooxygenase
HMCDFFFI_01818 1.3e-131 XK27_00915 C Luciferase-like monooxygenase
HMCDFFFI_01819 1.3e-150 lmrB EGP Major facilitator Superfamily
HMCDFFFI_01820 5.6e-34 rmaI K Transcriptional regulator
HMCDFFFI_01822 2.6e-08 K Bacterial regulatory helix-turn-helix protein, lysR family
HMCDFFFI_01824 4.5e-88 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
HMCDFFFI_01825 0.0 L Plasmid pRiA4b ORF-3-like protein
HMCDFFFI_01826 3.9e-246 brnQ U Component of the transport system for branched-chain amino acids
HMCDFFFI_01827 1.1e-120 3.6.1.55 F NUDIX domain
HMCDFFFI_01828 4e-76 ltrA S Bacterial low temperature requirement A protein (LtrA)
HMCDFFFI_01829 3.3e-84 S Protein of unknown function (DUF1211)
HMCDFFFI_01830 5.7e-121 lsa S ABC transporter
HMCDFFFI_01831 4.6e-202 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
HMCDFFFI_01832 6.9e-107 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
HMCDFFFI_01833 6.3e-229 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
HMCDFFFI_01834 1.9e-80 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
HMCDFFFI_01835 3.3e-130 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
HMCDFFFI_01836 5.8e-13 L Transposase and inactivated derivatives, IS30 family
HMCDFFFI_01837 7e-99 L Transposase and inactivated derivatives, IS30 family
HMCDFFFI_01838 7.2e-203 G Glycosyl hydrolases family 8
HMCDFFFI_01839 1.6e-246 ydaM M Glycosyl transferase
HMCDFFFI_01841 4.2e-150
HMCDFFFI_01842 3.5e-67 M Peptidase family M1 domain
HMCDFFFI_01843 5.5e-60 L An automated process has identified a potential problem with this gene model
HMCDFFFI_01844 9.4e-237 mepA V MATE efflux family protein
HMCDFFFI_01845 4.8e-73 yjaB 2.3.1.181 K Acetyltransferase (GNAT) domain
HMCDFFFI_01846 7.1e-69 S Putative adhesin
HMCDFFFI_01847 6.2e-100 yihX 3.1.3.10, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
HMCDFFFI_01849 9.8e-15 1.3.5.4 C succinate dehydrogenase
HMCDFFFI_01850 1.1e-14 K Acetyltransferase (GNAT) domain
HMCDFFFI_01851 1.2e-85 dps P Belongs to the Dps family
HMCDFFFI_01852 1.5e-178 MA20_14895 S Conserved hypothetical protein 698
HMCDFFFI_01854 1.3e-190 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
HMCDFFFI_01855 1.4e-101 3.6.1.27 I Acid phosphatase homologues
HMCDFFFI_01856 1.3e-148 yitS S Uncharacterised protein, DegV family COG1307
HMCDFFFI_01857 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
HMCDFFFI_01858 2.7e-88 S Domain of unknown function (DUF4767)
HMCDFFFI_01859 4.5e-64 C nitroreductase
HMCDFFFI_01860 6.4e-09 C nitroreductase
HMCDFFFI_01861 2.5e-158 ypbG 2.7.1.2 GK ROK family
HMCDFFFI_01862 2e-235 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
HMCDFFFI_01863 1.5e-31 lacE G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
HMCDFFFI_01864 1.8e-226 lacE G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
HMCDFFFI_01865 1e-40
HMCDFFFI_01866 4e-133 gmuR K UTRA
HMCDFFFI_01867 1.3e-303 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
HMCDFFFI_01868 3.2e-71 S Domain of unknown function (DUF3284)
HMCDFFFI_01869 1.5e-59 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
HMCDFFFI_01870 1.6e-55 celA1 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
HMCDFFFI_01871 3.7e-128 K UTRA domain
HMCDFFFI_01872 1.5e-293 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
HMCDFFFI_01873 2.2e-90 alkD L DNA alkylation repair enzyme
HMCDFFFI_01874 1.3e-176 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
HMCDFFFI_01875 2.3e-82
HMCDFFFI_01876 3.6e-39 C FMN_bind
HMCDFFFI_01877 5.4e-300 I Protein of unknown function (DUF2974)
HMCDFFFI_01878 3.8e-196 pbpX1 V Beta-lactamase
HMCDFFFI_01879 1.6e-199 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
HMCDFFFI_01880 3.8e-218 aspC 2.6.1.1 E Aminotransferase
HMCDFFFI_01881 7e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
HMCDFFFI_01882 2.8e-176 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
HMCDFFFI_01883 3.1e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
HMCDFFFI_01884 2.8e-75 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
HMCDFFFI_01885 4.4e-247 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
HMCDFFFI_01886 7.9e-45 L Transposase
HMCDFFFI_01887 2.9e-96 L Transposase
HMCDFFFI_01888 1.1e-55 L Transposase
HMCDFFFI_01889 7.6e-155 L An automated process has identified a potential problem with this gene model
HMCDFFFI_01890 2e-226 3.2.1.18 GH33 M Rib/alpha-like repeat
HMCDFFFI_01891 7.3e-45 L An automated process has identified a potential problem with this gene model
HMCDFFFI_01892 7.1e-203 S YcaO cyclodehydratase, ATP-ad Mg2+-binding
HMCDFFFI_01893 8.8e-192 S YcaO cyclodehydratase, ATP-ad Mg2+-binding
HMCDFFFI_01894 1.3e-153 noxC 1.5.1.39 C Nitroreductase
HMCDFFFI_01895 6.6e-23
HMCDFFFI_01896 9e-130 ecfA P ABC-type multidrug transport system ATPase component
HMCDFFFI_01897 1.3e-120
HMCDFFFI_01898 2e-24
HMCDFFFI_01899 1e-241 steT_1 E amino acid
HMCDFFFI_01900 1.2e-140 puuD S peptidase C26
HMCDFFFI_01901 4.9e-135 S PFAM Archaeal ATPase
HMCDFFFI_01902 6.2e-244 yifK E Amino acid permease
HMCDFFFI_01903 1.3e-233 cycA E Amino acid permease
HMCDFFFI_01904 4.7e-114 lepB 3.4.21.89 U Belongs to the peptidase S26 family
HMCDFFFI_01905 3.2e-119 V ABC transporter transmembrane region
HMCDFFFI_01906 0.0 clpE O AAA domain (Cdc48 subfamily)
HMCDFFFI_01907 4.4e-166 S Alpha/beta hydrolase of unknown function (DUF915)
HMCDFFFI_01908 1.3e-238 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
HMCDFFFI_01909 1.4e-29 XK27_06785 V ABC transporter, ATP-binding protein
HMCDFFFI_01910 1e-69 XK27_06785 V ABC transporter, ATP-binding protein
HMCDFFFI_01911 0.0 XK27_06780 V ABC transporter permease
HMCDFFFI_01912 1.9e-36
HMCDFFFI_01913 6.1e-291 ytgP S Polysaccharide biosynthesis protein
HMCDFFFI_01914 2.7e-137 lysA2 M Glycosyl hydrolases family 25
HMCDFFFI_01915 7.9e-134 S Protein of unknown function (DUF975)
HMCDFFFI_01916 3.5e-174 pbpX2 V Beta-lactamase
HMCDFFFI_01917 2.2e-243 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
HMCDFFFI_01918 1.7e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
HMCDFFFI_01919 2.7e-238 dltB M MBOAT, membrane-bound O-acyltransferase family
HMCDFFFI_01920 6.5e-287 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
HMCDFFFI_01921 5.2e-19 S D-Ala-teichoic acid biosynthesis protein
HMCDFFFI_01922 4.7e-48
HMCDFFFI_01923 5.3e-217 ywhK S Membrane
HMCDFFFI_01924 3.9e-81 ykuL S (CBS) domain
HMCDFFFI_01925 0.0 cadA P P-type ATPase
HMCDFFFI_01926 5.7e-62
HMCDFFFI_01927 2.8e-205 napA P Sodium/hydrogen exchanger family
HMCDFFFI_01928 1.9e-47 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
HMCDFFFI_01929 3.2e-43 S YoeB-like toxin of bacterial type II toxin-antitoxin system
HMCDFFFI_01930 2e-275 V ABC transporter transmembrane region
HMCDFFFI_01931 1.6e-47 S Putative adhesin
HMCDFFFI_01932 2.2e-134 mutR K Helix-turn-helix XRE-family like proteins
HMCDFFFI_01933 1.2e-53
HMCDFFFI_01934 2.4e-121 S CAAX protease self-immunity
HMCDFFFI_01935 1.8e-190 S DUF218 domain
HMCDFFFI_01936 0.0 macB_3 V ABC transporter, ATP-binding protein
HMCDFFFI_01937 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
HMCDFFFI_01938 2.8e-100 S ECF transporter, substrate-specific component
HMCDFFFI_01939 1.4e-201 tcsA S ABC transporter substrate-binding protein PnrA-like
HMCDFFFI_01940 1.5e-200 tcsA S ABC transporter substrate-binding protein PnrA-like
HMCDFFFI_01941 5.2e-284 xylG 3.6.3.17 S ABC transporter
HMCDFFFI_01942 4.3e-198 yufP S Belongs to the binding-protein-dependent transport system permease family
HMCDFFFI_01943 4.4e-172 yufQ S Belongs to the binding-protein-dependent transport system permease family
HMCDFFFI_01944 2.8e-159 yeaE S Aldo/keto reductase family
HMCDFFFI_01945 4.4e-132 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
HMCDFFFI_01946 8.5e-119 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
HMCDFFFI_01947 2e-126 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
HMCDFFFI_01948 1.1e-67
HMCDFFFI_01949 3.7e-140 cof S haloacid dehalogenase-like hydrolase
HMCDFFFI_01950 2.2e-230 pbuG S permease
HMCDFFFI_01951 1.1e-89 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
HMCDFFFI_01952 2.9e-238 pyrP F Permease
HMCDFFFI_01953 4.7e-293 K Putative DNA-binding domain
HMCDFFFI_01954 9.3e-35
HMCDFFFI_01955 1.4e-158 S reductase
HMCDFFFI_01956 6.3e-46
HMCDFFFI_01957 6.3e-208 V ABC transporter transmembrane region
HMCDFFFI_01958 8.3e-95 K Helix-turn-helix XRE-family like proteins
HMCDFFFI_01959 5.8e-85 2.3.1.128 K Acetyltransferase (GNAT) domain
HMCDFFFI_01960 4.8e-27 E Zn peptidase
HMCDFFFI_01961 1.1e-14 K Helix-turn-helix XRE-family like proteins
HMCDFFFI_01962 1.9e-20
HMCDFFFI_01963 6.7e-223 L Transposase
HMCDFFFI_01964 3.7e-27 L Transposase
HMCDFFFI_01965 0.0 uvrA3 L excinuclease ABC, A subunit
HMCDFFFI_01966 4.1e-189 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
HMCDFFFI_01967 1.8e-113 3.6.1.27 I Acid phosphatase homologues
HMCDFFFI_01968 3.7e-27 L Transposase
HMCDFFFI_01969 3.7e-70
HMCDFFFI_01970 1.4e-13
HMCDFFFI_01971 4.4e-190 KQ helix_turn_helix, mercury resistance
HMCDFFFI_01972 1.4e-203 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
HMCDFFFI_01973 2.9e-162 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
HMCDFFFI_01974 1.4e-115 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
HMCDFFFI_01975 4.6e-40 4.2.1.5 M Mandelate racemase muconate lactonizing enzyme
HMCDFFFI_01976 9.5e-173 4.2.1.40 M Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
HMCDFFFI_01977 6.7e-211 gudD 4.2.1.40 M Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
HMCDFFFI_01978 5.5e-141 C Citrate transporter
HMCDFFFI_01979 3.4e-73 K LysR substrate binding domain
HMCDFFFI_01980 8e-236 L Transposase DDE domain
HMCDFFFI_01981 1e-122 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
HMCDFFFI_01982 7.8e-166 4.2.1.6, 5.1.2.2 M Mandelate racemase muconate lactonizing enzyme
HMCDFFFI_01983 5.7e-90 mcyI 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
HMCDFFFI_01984 4e-66 ydiN EGP Major Facilitator Superfamily
HMCDFFFI_01985 3.8e-29 K Psort location Cytoplasmic, score
HMCDFFFI_01986 3.7e-27 L Transposase
HMCDFFFI_01987 6.2e-114 K Transcriptional regulator
HMCDFFFI_01988 1.2e-291 M Exporter of polyketide antibiotics
HMCDFFFI_01989 3.1e-167 yjjC V ABC transporter
HMCDFFFI_01990 7.4e-269 S Uncharacterised protein family (UPF0236)
HMCDFFFI_01992 5.7e-166 psaA P Belongs to the bacterial solute-binding protein 9 family
HMCDFFFI_01995 1.6e-219 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
HMCDFFFI_01996 1.2e-261 qacA EGP Major facilitator Superfamily
HMCDFFFI_01997 0.0 sacX 2.7.1.208, 2.7.1.211 G phosphotransferase system
HMCDFFFI_01998 1.3e-154 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
HMCDFFFI_01999 1.3e-198 S Bacterial protein of unknown function (DUF871)
HMCDFFFI_02000 4.3e-147 ybbH_2 K rpiR family
HMCDFFFI_02001 2.3e-273 cydA 1.10.3.14 C ubiquinol oxidase
HMCDFFFI_02002 3.3e-178 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
HMCDFFFI_02003 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
HMCDFFFI_02004 8.3e-270 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
HMCDFFFI_02005 1.4e-127 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
HMCDFFFI_02006 5.5e-178 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
HMCDFFFI_02007 3e-162 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
HMCDFFFI_02008 4.1e-231 ndh 1.6.99.3 C NADH dehydrogenase
HMCDFFFI_02009 2e-94 3.6.4.12 S PD-(D/E)XK nuclease family transposase
HMCDFFFI_02010 3.7e-168 K LysR substrate binding domain
HMCDFFFI_02011 4.9e-122 3.6.1.27 I Acid phosphatase homologues
HMCDFFFI_02012 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
HMCDFFFI_02013 8e-299 ytgP S Polysaccharide biosynthesis protein
HMCDFFFI_02014 1.5e-44 pspC KT PspC domain
HMCDFFFI_02016 4.2e-242 dacA 3.4.16.4 M Belongs to the peptidase S11 family
HMCDFFFI_02017 7.4e-155 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
HMCDFFFI_02018 2.3e-98 M ErfK YbiS YcfS YnhG
HMCDFFFI_02019 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
HMCDFFFI_02020 1.8e-170 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
HMCDFFFI_02021 7.2e-92 3.6.1.55 L NUDIX domain
HMCDFFFI_02022 2.6e-37
HMCDFFFI_02023 7.6e-46
HMCDFFFI_02024 6.4e-235 L Transposase
HMCDFFFI_02025 9.2e-206 S PFAM Archaeal ATPase
HMCDFFFI_02026 1.6e-84 S GyrI-like small molecule binding domain
HMCDFFFI_02027 1.4e-168 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
HMCDFFFI_02028 6.5e-220 I transferase activity, transferring acyl groups other than amino-acyl groups
HMCDFFFI_02029 1.2e-160 K Transcriptional regulator, LysR family
HMCDFFFI_02030 3.3e-169 mdcH 2.3.1.39 I Acyl transferase domain
HMCDFFFI_02031 0.0 mdcA 2.3.1.187 I Malonate decarboxylase, alpha subunit, transporter
HMCDFFFI_02032 7.1e-52 mdcC C Malonate decarboxylase delta subunit (MdcD)
HMCDFFFI_02033 2.8e-307 mdcD 4.1.1.87 I Malonate decarboxylase gamma subunit (MdcE)
HMCDFFFI_02034 3.1e-124 mdcG 2.7.7.66 H Phosphoribosyl-dephospho-CoA transferase MdcG
HMCDFFFI_02035 7.7e-154 yisY 1.11.1.10 S Alpha/beta hydrolase family
HMCDFFFI_02036 5.5e-147 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
HMCDFFFI_02037 1.3e-54
HMCDFFFI_02038 1.1e-269 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
HMCDFFFI_02039 5.2e-156 U The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
HMCDFFFI_02040 3.9e-78 U The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
HMCDFFFI_02041 1.3e-139 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
HMCDFFFI_02042 3.6e-111 G Phosphoglycerate mutase family
HMCDFFFI_02043 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
HMCDFFFI_02044 6.5e-151 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
HMCDFFFI_02045 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
HMCDFFFI_02046 7.2e-56 yheA S Belongs to the UPF0342 family
HMCDFFFI_02047 1.9e-233 yhaO L Ser Thr phosphatase family protein
HMCDFFFI_02048 0.0 L AAA domain
HMCDFFFI_02049 1.4e-186 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
HMCDFFFI_02050 5.9e-24
HMCDFFFI_02051 2.4e-51 S Domain of unknown function DUF1829
HMCDFFFI_02052 7.3e-267
HMCDFFFI_02053 1.9e-72 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
HMCDFFFI_02054 8.9e-151 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
HMCDFFFI_02055 5.1e-25
HMCDFFFI_02056 8.3e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
HMCDFFFI_02057 5.7e-135 ecsA V ABC transporter, ATP-binding protein
HMCDFFFI_02058 1.9e-220 ecsB U ABC transporter
HMCDFFFI_02059 3.3e-126 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
HMCDFFFI_02060 1.3e-13 S Protein of unknown function (DUF805)
HMCDFFFI_02061 2.8e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
HMCDFFFI_02062 1.7e-122 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
HMCDFFFI_02063 1.2e-249 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
HMCDFFFI_02064 1.3e-235 mepA V MATE efflux family protein
HMCDFFFI_02065 1.3e-174 S SLAP domain
HMCDFFFI_02066 1.2e-221 L Putative transposase DNA-binding domain
HMCDFFFI_02067 6.7e-113 L Resolvase, N-terminal
HMCDFFFI_02068 1.9e-112 M Peptidase family M1 domain
HMCDFFFI_02069 5.1e-162 M Peptidase family M1 domain
HMCDFFFI_02070 7.9e-193 S Bacteriocin helveticin-J
HMCDFFFI_02071 4.3e-52 L RelB antitoxin
HMCDFFFI_02072 2e-139 qmcA O prohibitin homologues
HMCDFFFI_02073 1.6e-39 darA C Flavodoxin
HMCDFFFI_02074 1.4e-205 purD 6.3.4.13 F Belongs to the GARS family
HMCDFFFI_02075 2.2e-54
HMCDFFFI_02076 1.2e-20
HMCDFFFI_02077 6.3e-95
HMCDFFFI_02078 3.3e-35 M Rib/alpha-like repeat
HMCDFFFI_02079 1.4e-23
HMCDFFFI_02080 2.7e-63 L PFAM IS66 Orf2 family protein
HMCDFFFI_02081 8.7e-34 S Transposase C of IS166 homeodomain
HMCDFFFI_02082 1.2e-244 L Transposase IS66 family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)