ORF_ID e_value Gene_name EC_number CAZy COGs Description
GOMJABIG_00004 3.2e-20 S Bacteriocin class II with double-glycine leader peptide
GOMJABIG_00005 4.9e-105 M Transport protein ComB
GOMJABIG_00006 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
GOMJABIG_00007 1.6e-143 K LytTr DNA-binding domain
GOMJABIG_00008 8.6e-223 L Putative transposase DNA-binding domain
GOMJABIG_00009 1.2e-204 2.7.13.3 T GHKL domain
GOMJABIG_00011 8.1e-114 udk 2.7.1.48 F Cytidine monophosphokinase
GOMJABIG_00013 8.3e-76 S Putative adhesin
GOMJABIG_00014 5e-66
GOMJABIG_00015 4.4e-107 glnP P ABC transporter permease
GOMJABIG_00016 2.1e-109 gluC P ABC transporter permease
GOMJABIG_00017 4.5e-149 glnH ET ABC transporter
GOMJABIG_00018 6.8e-136 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GOMJABIG_00019 3.2e-147 glnH ET ABC transporter
GOMJABIG_00020 0.0 V ABC transporter transmembrane region
GOMJABIG_00021 1e-299 XK27_09600 V ABC transporter, ATP-binding protein
GOMJABIG_00022 9.6e-66 K Transcriptional regulator, MarR family
GOMJABIG_00023 1.4e-150 S Alpha beta hydrolase
GOMJABIG_00024 1.1e-218 naiP EGP Major facilitator Superfamily
GOMJABIG_00025 1.6e-279 pipD E Peptidase family C69
GOMJABIG_00026 4.3e-283 dtpT U amino acid peptide transporter
GOMJABIG_00027 0.0 lacA 3.2.1.23 G -beta-galactosidase
GOMJABIG_00028 5.6e-255 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
GOMJABIG_00029 1.4e-267 aaxC E Arginine ornithine antiporter
GOMJABIG_00030 9.8e-260 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
GOMJABIG_00031 3.7e-129 ybbM S Uncharacterised protein family (UPF0014)
GOMJABIG_00032 1.6e-112 ybbL S ABC transporter, ATP-binding protein
GOMJABIG_00034 5.1e-209 pepA E M42 glutamyl aminopeptidase
GOMJABIG_00035 5.5e-77
GOMJABIG_00036 1.1e-66 K helix_turn_helix multiple antibiotic resistance protein
GOMJABIG_00037 4.5e-30
GOMJABIG_00038 7.7e-214 mdtG EGP Major facilitator Superfamily
GOMJABIG_00039 7.3e-245 yagE E amino acid
GOMJABIG_00040 5.6e-308 gadC E Contains amino acid permease domain
GOMJABIG_00041 1e-259 pepC 3.4.22.40 E Peptidase C1-like family
GOMJABIG_00042 1.2e-274 pipD E Peptidase family C69
GOMJABIG_00043 9.7e-284 gadC E Contains amino acid permease domain
GOMJABIG_00044 3.6e-265 pepC 3.4.22.40 E Peptidase C1-like family
GOMJABIG_00045 1e-283 E Phospholipase B
GOMJABIG_00046 2.8e-111 3.6.1.27 I Acid phosphatase homologues
GOMJABIG_00047 3.3e-169 glsA 3.5.1.2 E Belongs to the glutaminase family
GOMJABIG_00048 5.5e-14 pgm3 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
GOMJABIG_00049 2.2e-78 lacG 3.2.1.85 G Belongs to the glycosyl hydrolase 1 family
GOMJABIG_00050 3.1e-240 pyrP F Permease
GOMJABIG_00051 1.9e-125 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
GOMJABIG_00052 2.9e-33 S PFAM Archaeal ATPase
GOMJABIG_00053 7.5e-55 S PFAM Archaeal ATPase
GOMJABIG_00054 1.4e-22 S PFAM Archaeal ATPase
GOMJABIG_00055 3.2e-74 2.3.1.128 K acetyltransferase
GOMJABIG_00056 1.8e-13
GOMJABIG_00058 2.4e-69
GOMJABIG_00059 2.2e-255 emrY EGP Major facilitator Superfamily
GOMJABIG_00060 2.3e-252 emrY EGP Major facilitator Superfamily
GOMJABIG_00061 6.3e-142 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GOMJABIG_00062 2.4e-136 S CAAX amino terminal protease
GOMJABIG_00063 4.2e-159 mleP3 S Membrane transport protein
GOMJABIG_00064 2.8e-94 tag 3.2.2.20 L glycosylase
GOMJABIG_00065 3.5e-188 S Bacteriocin helveticin-J
GOMJABIG_00066 5.4e-175 yfeO P Voltage gated chloride channel
GOMJABIG_00067 3.6e-79 yebR 1.8.4.14 T GAF domain-containing protein
GOMJABIG_00068 1.7e-111 ylbE GM NAD(P)H-binding
GOMJABIG_00069 1.5e-126 yfeJ 6.3.5.2 F Glutamine amidotransferase class-I
GOMJABIG_00070 1.6e-91 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
GOMJABIG_00072 5.1e-45
GOMJABIG_00073 1.2e-171 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
GOMJABIG_00074 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
GOMJABIG_00075 3.9e-75 dacA 3.4.16.4 M Belongs to the peptidase S11 family
GOMJABIG_00076 1.1e-73 dacA 3.4.16.4 M Belongs to the peptidase S11 family
GOMJABIG_00077 3.9e-148 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GOMJABIG_00078 5.7e-135
GOMJABIG_00079 1.8e-217 MA20_36090 S Protein of unknown function (DUF2974)
GOMJABIG_00080 1.2e-299 ytgP S Polysaccharide biosynthesis protein
GOMJABIG_00081 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
GOMJABIG_00082 3.7e-114 3.6.1.27 I Acid phosphatase homologues
GOMJABIG_00083 8e-258 qacA EGP Major facilitator Superfamily
GOMJABIG_00084 6.2e-216 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GOMJABIG_00089 5.3e-116
GOMJABIG_00090 7e-153 ypbG 2.7.1.2 GK ROK family
GOMJABIG_00091 5.4e-280 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GOMJABIG_00092 3e-204 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GOMJABIG_00093 9.4e-49 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GOMJABIG_00094 1.3e-51 ptcB 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
GOMJABIG_00095 2.6e-39
GOMJABIG_00096 1.5e-50 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
GOMJABIG_00097 2.1e-134 gmuR K UTRA
GOMJABIG_00098 5.2e-305 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GOMJABIG_00099 3.5e-70 S Domain of unknown function (DUF3284)
GOMJABIG_00100 3.8e-125 yydK K UTRA
GOMJABIG_00101 5.3e-248 celD G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GOMJABIG_00102 5e-79
GOMJABIG_00103 7.1e-291 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GOMJABIG_00104 7e-33 hsp O Belongs to the small heat shock protein (HSP20) family
GOMJABIG_00105 1.2e-74 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GOMJABIG_00106 2.6e-32
GOMJABIG_00107 3.7e-254 pepC 3.4.22.40 E aminopeptidase
GOMJABIG_00108 7.2e-41 ps301 K sequence-specific DNA binding
GOMJABIG_00109 2.8e-29 S Motility quorum-sensing regulator, toxin of MqsA
GOMJABIG_00110 4.7e-117 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
GOMJABIG_00111 6.3e-254 pepC 3.4.22.40 E aminopeptidase
GOMJABIG_00113 7.7e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GOMJABIG_00114 0.0 XK27_08315 M Sulfatase
GOMJABIG_00115 1.9e-112 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
GOMJABIG_00116 7.5e-192 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GOMJABIG_00117 1.1e-169 yqhA G Aldose 1-epimerase
GOMJABIG_00118 2e-152 glcU U sugar transport
GOMJABIG_00119 3.3e-116
GOMJABIG_00120 8e-179 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
GOMJABIG_00121 3.4e-71 2.4.1.83 GT2 S GtrA-like protein
GOMJABIG_00122 9.7e-42 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GOMJABIG_00123 2.4e-46 S HicB_like antitoxin of bacterial toxin-antitoxin system
GOMJABIG_00124 1.1e-132 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GOMJABIG_00125 2.4e-74 S PAS domain
GOMJABIG_00126 1.4e-142
GOMJABIG_00127 2.3e-139
GOMJABIG_00128 2e-172 S Oxidoreductase family, NAD-binding Rossmann fold
GOMJABIG_00129 0.0 yjbQ P TrkA C-terminal domain protein
GOMJABIG_00130 3.6e-143 fruK 2.7.1.11, 2.7.1.56 G pfkB family carbohydrate kinase
GOMJABIG_00131 1.3e-226 lysA2 M Glycosyl hydrolases family 25
GOMJABIG_00132 7.7e-214 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
GOMJABIG_00133 8.2e-35 S Protein of unknown function (DUF2922)
GOMJABIG_00134 4.2e-27
GOMJABIG_00135 7.9e-114
GOMJABIG_00136 1.7e-72
GOMJABIG_00137 0.0 kup P Transport of potassium into the cell
GOMJABIG_00138 0.0 kup P Transport of potassium into the cell
GOMJABIG_00139 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
GOMJABIG_00140 0.0 S Bacterial membrane protein, YfhO
GOMJABIG_00141 0.0 pepO 3.4.24.71 O Peptidase family M13
GOMJABIG_00142 0.0 fruA 2.7.1.200, 2.7.1.202 GT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GOMJABIG_00143 2.2e-168 pfkB 2.7.1.11, 2.7.1.56 H pfkB family carbohydrate kinase
GOMJABIG_00144 4.9e-134 rpl K Helix-turn-helix domain, rpiR family
GOMJABIG_00145 1.1e-173 D nuclear chromosome segregation
GOMJABIG_00146 2.3e-184 yihT 4.1.2.40, 4.1.2.57 G Belongs to the aldolase LacD family
GOMJABIG_00147 1.2e-225 yttB EGP Major facilitator Superfamily
GOMJABIG_00148 8.9e-223 XK27_04775 S PAS domain
GOMJABIG_00149 5.9e-103 S Iron-sulfur cluster assembly protein
GOMJABIG_00150 3.1e-130 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GOMJABIG_00151 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
GOMJABIG_00152 8e-265 yxbA 6.3.1.12 S ATP-grasp enzyme
GOMJABIG_00153 0.0 asnB 6.3.5.4 E Asparagine synthase
GOMJABIG_00154 2.6e-274 S Calcineurin-like phosphoesterase
GOMJABIG_00155 1.9e-83
GOMJABIG_00156 7.1e-147 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
GOMJABIG_00157 2.7e-130 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
GOMJABIG_00158 8.1e-140 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
GOMJABIG_00159 9.8e-169 phnD P Phosphonate ABC transporter
GOMJABIG_00161 1e-87 uspA T universal stress protein
GOMJABIG_00162 1.3e-148 ptp3 3.1.3.48 T Tyrosine phosphatase family
GOMJABIG_00163 1.7e-128 XK27_08440 K UTRA domain
GOMJABIG_00164 6.5e-99 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GOMJABIG_00165 1.8e-86 ntd 2.4.2.6 F Nucleoside
GOMJABIG_00166 2.7e-11 2.1.1.113 L Belongs to the N(4) N(6)-methyltransferase family
GOMJABIG_00168 2.3e-47 lysA2 M Glycosyl hydrolases family 25
GOMJABIG_00169 1.7e-105
GOMJABIG_00170 2.6e-182 S zinc-ribbon domain
GOMJABIG_00171 1.9e-65 2.7.1.191 G PTS system fructose IIA component
GOMJABIG_00172 7.1e-147 manZ_1 G PTS system mannose/fructose/sorbose family IID component
GOMJABIG_00173 3.4e-129 XK27_08455 G PTS system sorbose-specific iic component
GOMJABIG_00174 9.7e-83 2.7.1.191 G PTS system sorbose subfamily IIB component
GOMJABIG_00175 3.7e-226 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
GOMJABIG_00176 7.4e-214 agaS G SIS domain
GOMJABIG_00177 1.2e-126 XK27_08435 K UTRA
GOMJABIG_00178 0.0 G Belongs to the glycosyl hydrolase 31 family
GOMJABIG_00179 1.3e-151 I alpha/beta hydrolase fold
GOMJABIG_00180 3.8e-118 yibF S overlaps another CDS with the same product name
GOMJABIG_00181 2.6e-168 yibE S overlaps another CDS with the same product name
GOMJABIG_00182 1.2e-272 yjcE P Sodium proton antiporter
GOMJABIG_00185 6e-24
GOMJABIG_00187 2.2e-08 K Conserved phage C-terminus (Phg_2220_C)
GOMJABIG_00190 1.1e-117 liaI S membrane
GOMJABIG_00191 2.7e-79 XK27_02470 K LytTr DNA-binding domain
GOMJABIG_00192 6.7e-50 ptcB 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
GOMJABIG_00193 3.6e-54 yvdD 3.2.2.10 S Belongs to the LOG family
GOMJABIG_00194 8.5e-37 yvdD 3.2.2.10 S Belongs to the LOG family
GOMJABIG_00195 8.7e-116 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
GOMJABIG_00196 0.0 uup S ABC transporter, ATP-binding protein
GOMJABIG_00197 6.4e-243 G Bacterial extracellular solute-binding protein
GOMJABIG_00198 4.7e-79
GOMJABIG_00199 8.1e-151 K Helix-turn-helix XRE-family like proteins
GOMJABIG_00200 8.2e-76 apfA 2.7.7.72, 3.6.1.61 F NUDIX domain
GOMJABIG_00201 2.7e-73 L oxidized base lesion DNA N-glycosylase activity
GOMJABIG_00202 3.5e-52 L oxidized base lesion DNA N-glycosylase activity
GOMJABIG_00203 1.2e-244 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
GOMJABIG_00204 4.1e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GOMJABIG_00205 9.1e-189 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GOMJABIG_00206 1.2e-161 S AAA domain, putative AbiEii toxin, Type IV TA system
GOMJABIG_00207 5.2e-36 relB L RelB antitoxin
GOMJABIG_00208 1.1e-34 S Bacterial toxin of type II toxin-antitoxin system, YafQ
GOMJABIG_00209 7.2e-115
GOMJABIG_00210 9.2e-44
GOMJABIG_00211 1.6e-180 D nuclear chromosome segregation
GOMJABIG_00212 8.1e-196 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GOMJABIG_00213 3.5e-94 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
GOMJABIG_00214 1.2e-132 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
GOMJABIG_00215 1.3e-85 folT S ECF transporter, substrate-specific component
GOMJABIG_00216 3.5e-137 fat 3.1.2.21 I Acyl-ACP thioesterase
GOMJABIG_00217 1.7e-154 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GOMJABIG_00218 4.4e-58 yabA L Involved in initiation control of chromosome replication
GOMJABIG_00219 1.2e-152 holB 2.7.7.7 L DNA polymerase III
GOMJABIG_00220 5e-51 yaaQ S Cyclic-di-AMP receptor
GOMJABIG_00221 6.9e-113 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GOMJABIG_00222 9e-26 S Protein of unknown function (DUF2508)
GOMJABIG_00223 8.1e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GOMJABIG_00224 1.7e-51 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
GOMJABIG_00225 2.5e-311 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GOMJABIG_00226 1e-84 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
GOMJABIG_00227 3.6e-22
GOMJABIG_00228 2.3e-113 rsmC 2.1.1.172 J Methyltransferase
GOMJABIG_00229 2.7e-32
GOMJABIG_00230 1.2e-128 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
GOMJABIG_00231 9.4e-51 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
GOMJABIG_00232 4.2e-81 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GOMJABIG_00233 2.2e-145 aatB ET ABC transporter substrate-binding protein
GOMJABIG_00234 3.9e-116 glnQ 3.6.3.21 E ABC transporter
GOMJABIG_00235 4.6e-109 glnP P ABC transporter permease
GOMJABIG_00236 3.6e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
GOMJABIG_00237 5.3e-69 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GOMJABIG_00238 1.5e-100 nusG K Participates in transcription elongation, termination and antitermination
GOMJABIG_00239 3.4e-11 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
GOMJABIG_00240 1.8e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
GOMJABIG_00241 3.3e-189 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GOMJABIG_00242 1.3e-227 G Major Facilitator Superfamily
GOMJABIG_00243 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GOMJABIG_00244 3.9e-284 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
GOMJABIG_00245 1.7e-34
GOMJABIG_00246 6e-89 yvrI K sigma factor activity
GOMJABIG_00247 2e-140 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GOMJABIG_00248 1.3e-78 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
GOMJABIG_00249 3.6e-271 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
GOMJABIG_00250 1.3e-287 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GOMJABIG_00251 5.4e-256 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GOMJABIG_00252 3.6e-102 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
GOMJABIG_00253 7.2e-158 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GOMJABIG_00254 8.7e-08 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GOMJABIG_00255 3.1e-264 pepC 3.4.22.40 E Peptidase C1-like family
GOMJABIG_00256 1.9e-197 nss M transferase activity, transferring glycosyl groups
GOMJABIG_00257 4.6e-160 cpsJ S glycosyl transferase family 2
GOMJABIG_00258 6.9e-21 UW Tetratricopeptide repeat
GOMJABIG_00259 1.5e-71
GOMJABIG_00260 3.1e-79 4.1.1.44 S decarboxylase
GOMJABIG_00261 4.1e-37 4.1.1.44 S decarboxylase
GOMJABIG_00262 0.0 S TerB-C domain
GOMJABIG_00263 1.5e-250 P P-loop Domain of unknown function (DUF2791)
GOMJABIG_00264 0.0 lhr L DEAD DEAH box helicase
GOMJABIG_00265 1.7e-190 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
GOMJABIG_00266 2e-127 S Uncharacterized protein conserved in bacteria (DUF2263)
GOMJABIG_00267 1.2e-211 L transposase, IS605 OrfB family
GOMJABIG_00268 1.7e-246 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
GOMJABIG_00269 8.5e-159 yvgN C Aldo keto reductase
GOMJABIG_00271 1.4e-92 K acetyltransferase
GOMJABIG_00272 1.5e-60 psiE S Phosphate-starvation-inducible E
GOMJABIG_00273 3.9e-133 S Putative ABC-transporter type IV
GOMJABIG_00274 3.5e-114 M LysM domain protein
GOMJABIG_00275 1.1e-98 M LysM domain protein
GOMJABIG_00277 2.5e-31 yjgN S Bacterial protein of unknown function (DUF898)
GOMJABIG_00278 1.9e-36 K SIS domain
GOMJABIG_00279 9.9e-166 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
GOMJABIG_00282 5.5e-52 P Rhodanese Homology Domain
GOMJABIG_00283 6e-189
GOMJABIG_00284 3.6e-123 gntR1 K UTRA
GOMJABIG_00285 7.4e-70 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
GOMJABIG_00286 1.4e-133 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
GOMJABIG_00287 1.6e-202 csaB M Glycosyl transferases group 1
GOMJABIG_00288 0.0 S Glycosyltransferase like family 2
GOMJABIG_00289 4.2e-283 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GOMJABIG_00290 2.1e-154 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
GOMJABIG_00291 0.0 spoVK O ATPase family associated with various cellular activities (AAA)
GOMJABIG_00292 0.0 pacL 3.6.3.8 P P-type ATPase
GOMJABIG_00293 8.3e-226 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
GOMJABIG_00294 8.1e-255 epsU S Polysaccharide biosynthesis protein
GOMJABIG_00295 3.6e-131 M Glycosyltransferase sugar-binding region containing DXD motif
GOMJABIG_00296 2.1e-79 ydcK S Belongs to the SprT family
GOMJABIG_00298 8.4e-100 S ECF transporter, substrate-specific component
GOMJABIG_00299 1.3e-111 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
GOMJABIG_00300 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
GOMJABIG_00301 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GOMJABIG_00302 1.7e-207 camS S sex pheromone
GOMJABIG_00303 3.3e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GOMJABIG_00304 9e-270 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
GOMJABIG_00305 2.3e-273 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GOMJABIG_00306 1.8e-167 yegS 2.7.1.107 G Lipid kinase
GOMJABIG_00307 1.9e-147 S hydrolase
GOMJABIG_00308 4.2e-25 UW Tetratricopeptide repeat
GOMJABIG_00311 6.5e-19 GT2,GT4 M Pfam:DUF1792
GOMJABIG_00312 1.1e-264 GT2,GT4 M Pfam:DUF1792
GOMJABIG_00313 1.1e-130 fhaB M Rib/alpha-like repeat
GOMJABIG_00314 6.6e-117 licT K CAT RNA binding domain
GOMJABIG_00315 1.1e-27 bglP 2.7.1.211 G phosphotransferase system
GOMJABIG_00316 7.9e-155 EG EamA-like transporter family
GOMJABIG_00317 0.0 oppA E ABC transporter substrate-binding protein
GOMJABIG_00318 1.1e-167 2.7.1.191 G PTS system sorbose subfamily IIB component
GOMJABIG_00319 2.2e-140 G PTS system sorbose-specific iic component
GOMJABIG_00320 2.5e-144 G PTS system mannose/fructose/sorbose family IID component
GOMJABIG_00321 1.3e-66
GOMJABIG_00322 1.4e-89 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
GOMJABIG_00323 7e-206 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
GOMJABIG_00324 9.6e-237 ydjN U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
GOMJABIG_00325 2.4e-133 S PAS domain
GOMJABIG_00326 6.2e-273 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
GOMJABIG_00327 0.0 glvC 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
GOMJABIG_00328 3.5e-146 glvR K Helix-turn-helix domain, rpiR family
GOMJABIG_00329 7.4e-86
GOMJABIG_00330 3.2e-86 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GOMJABIG_00331 9.8e-43 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GOMJABIG_00332 0.0 GM domain, Protein
GOMJABIG_00333 1.5e-143 pnuC H nicotinamide mononucleotide transporter
GOMJABIG_00334 3.1e-90 S PAS domain
GOMJABIG_00335 4.2e-239 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
GOMJABIG_00336 2e-74 S Protein of unknown function (DUF3290)
GOMJABIG_00337 3.4e-112 yviA S Protein of unknown function (DUF421)
GOMJABIG_00338 5.7e-149 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
GOMJABIG_00339 4.7e-182 dnaQ 2.7.7.7 L EXOIII
GOMJABIG_00340 4.2e-198 ltrA S Bacterial low temperature requirement A protein (LtrA)
GOMJABIG_00341 1.6e-159 dkg S reductase
GOMJABIG_00342 5.5e-158 endA F DNA RNA non-specific endonuclease
GOMJABIG_00343 2.2e-284 pipD E Dipeptidase
GOMJABIG_00344 3.8e-204 malK P ATPases associated with a variety of cellular activities
GOMJABIG_00345 2.1e-157 gtsB P ABC-type sugar transport systems, permease components
GOMJABIG_00346 5e-148 gtsC P Binding-protein-dependent transport system inner membrane component
GOMJABIG_00347 1.9e-247 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
GOMJABIG_00348 7.4e-239 G Bacterial extracellular solute-binding protein
GOMJABIG_00349 6.5e-39 ypaA S Protein of unknown function (DUF1304)
GOMJABIG_00350 8.2e-76 yybA 2.3.1.57 K Transcriptional regulator
GOMJABIG_00351 2e-86 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
GOMJABIG_00352 2.6e-79 yjcF S Acetyltransferase (GNAT) domain
GOMJABIG_00353 2.7e-166 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
GOMJABIG_00354 2.2e-160 3.5.2.6 V Beta-lactamase enzyme family
GOMJABIG_00355 1.4e-96 yobS K Bacterial regulatory proteins, tetR family
GOMJABIG_00356 0.0 ydgH S MMPL family
GOMJABIG_00357 7.7e-146 cof S haloacid dehalogenase-like hydrolase
GOMJABIG_00358 5.8e-126 S SNARE associated Golgi protein
GOMJABIG_00359 5.6e-178
GOMJABIG_00360 3.5e-255 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
GOMJABIG_00361 1.3e-156 hipB K Helix-turn-helix
GOMJABIG_00362 7e-155 I alpha/beta hydrolase fold
GOMJABIG_00363 5.3e-107 yjbF S SNARE associated Golgi protein
GOMJABIG_00364 3.4e-100 J Acetyltransferase (GNAT) domain
GOMJABIG_00365 2.5e-218 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GOMJABIG_00366 1.1e-52 trxA O Belongs to the thioredoxin family
GOMJABIG_00367 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
GOMJABIG_00368 6.7e-93 cvpA S Colicin V production protein
GOMJABIG_00369 1e-40 yrzB S Belongs to the UPF0473 family
GOMJABIG_00370 1.8e-72 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GOMJABIG_00371 2.6e-42 yrzL S Belongs to the UPF0297 family
GOMJABIG_00372 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GOMJABIG_00373 2e-226 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
GOMJABIG_00374 1.9e-183 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
GOMJABIG_00375 2.2e-207 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GOMJABIG_00376 1.9e-283 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GOMJABIG_00377 1.2e-39 yajC U Preprotein translocase
GOMJABIG_00378 4.3e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
GOMJABIG_00379 1e-99 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
GOMJABIG_00380 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
GOMJABIG_00381 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
GOMJABIG_00382 0.0 nisT V ABC transporter
GOMJABIG_00383 5.8e-30
GOMJABIG_00384 8.1e-58
GOMJABIG_00385 1.8e-295 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
GOMJABIG_00386 2e-43 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GOMJABIG_00387 3.3e-113 sip L Belongs to the 'phage' integrase family
GOMJABIG_00388 6.5e-23 K sequence-specific DNA binding
GOMJABIG_00389 3.3e-10 S Helix-turn-helix domain
GOMJABIG_00391 1.9e-37 GT2 M Glycosyltransferase like family 2
GOMJABIG_00392 1e-40 S O-antigen ligase like membrane protein
GOMJABIG_00393 3.4e-99 M Glycosyl transferases group 1
GOMJABIG_00394 4.3e-10 2.3.1.79 S Hexapeptide repeat of succinyl-transferase
GOMJABIG_00395 8.4e-47 GT4 M Glycosyl transferases group 1
GOMJABIG_00396 4.7e-69 pssE S Glycosyltransferase family 28 C-terminal domain
GOMJABIG_00397 1.2e-82 cpsF M Oligosaccharide biosynthesis protein Alg14 like
GOMJABIG_00398 3.6e-117 rfbP M Bacterial sugar transferase
GOMJABIG_00399 3.9e-139 ywqE 3.1.3.48 GM PHP domain protein
GOMJABIG_00400 8.7e-123 ywqD 2.7.10.1 D Capsular exopolysaccharide family
GOMJABIG_00401 4.4e-139 epsB M biosynthesis protein
GOMJABIG_00402 4.6e-156 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GOMJABIG_00403 4.1e-78 K DNA-templated transcription, initiation
GOMJABIG_00404 6.7e-164
GOMJABIG_00405 4.9e-122 frnE Q DSBA-like thioredoxin domain
GOMJABIG_00406 2.9e-216
GOMJABIG_00407 1.2e-75 S Domain of unknown function (DUF4767)
GOMJABIG_00408 6.3e-114 frnE Q DSBA-like thioredoxin domain
GOMJABIG_00410 5.1e-82
GOMJABIG_00411 3.7e-87 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
GOMJABIG_00412 1.5e-103 engB D Necessary for normal cell division and for the maintenance of normal septation
GOMJABIG_00413 1.7e-232 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GOMJABIG_00414 6.1e-204 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
GOMJABIG_00415 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GOMJABIG_00416 5e-159
GOMJABIG_00417 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GOMJABIG_00418 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GOMJABIG_00419 7.5e-34 rpsT J Binds directly to 16S ribosomal RNA
GOMJABIG_00420 6.8e-176 holA 2.7.7.7 L DNA polymerase III delta subunit
GOMJABIG_00421 2.2e-187 comEC S Competence protein ComEC
GOMJABIG_00422 2.1e-118 ybhL S Belongs to the BI1 family
GOMJABIG_00423 1.1e-142 cbiQ P cobalt transport
GOMJABIG_00424 0.0 ykoD P ABC transporter, ATP-binding protein
GOMJABIG_00425 1.9e-95 S UPF0397 protein
GOMJABIG_00426 1.2e-160 salL 2.5.1.63, 2.5.1.94 K S-adenosyl-l-methionine hydroxide adenosyltransferase
GOMJABIG_00427 8.3e-241 nhaC C Na H antiporter NhaC
GOMJABIG_00428 1.5e-129 mutF V ABC transporter, ATP-binding protein
GOMJABIG_00429 9.9e-118 spaE S ABC-2 family transporter protein
GOMJABIG_00430 9.9e-255 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GOMJABIG_00431 2e-33 sugE P Small Multidrug Resistance protein
GOMJABIG_00432 5.4e-184 V Beta-lactamase
GOMJABIG_00433 3.6e-33 neo 2.7.1.87, 2.7.1.95 F Belongs to the aminoglycoside phosphotransferase family
GOMJABIG_00434 4.7e-91 neo 2.7.1.87, 2.7.1.95 F Belongs to the aminoglycoside phosphotransferase family
GOMJABIG_00435 8.5e-77 3.6.1.55 L NUDIX domain
GOMJABIG_00436 0.0 tolA M M26 IgA1-specific Metallo-endopeptidase C-terminal region
GOMJABIG_00437 1.1e-13 XK27_04080 H RibD C-terminal domain
GOMJABIG_00438 9.8e-20 XK27_04080 H RibD C-terminal domain
GOMJABIG_00444 5.8e-24
GOMJABIG_00445 9.6e-68 K LytTr DNA-binding domain
GOMJABIG_00446 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
GOMJABIG_00447 7.8e-103 M Transport protein ComB
GOMJABIG_00449 1.3e-45 S Enterocin A Immunity
GOMJABIG_00450 1.4e-223 S CAAX protease self-immunity
GOMJABIG_00454 1.8e-53 S Enterocin A Immunity
GOMJABIG_00456 0.0 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
GOMJABIG_00457 5.2e-212 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
GOMJABIG_00458 3.6e-162 rssA S Phospholipase, patatin family
GOMJABIG_00459 1.3e-255 glnPH2 P ABC transporter permease
GOMJABIG_00460 4.6e-129 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GOMJABIG_00461 8.1e-96 K Acetyltransferase (GNAT) domain
GOMJABIG_00462 1.6e-157 pstS P Phosphate
GOMJABIG_00463 1.2e-161 pstC P probably responsible for the translocation of the substrate across the membrane
GOMJABIG_00464 3.5e-155 pstA P Phosphate transport system permease protein PstA
GOMJABIG_00465 6.3e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GOMJABIG_00466 7.8e-140 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GOMJABIG_00467 1.9e-108 phoU P Plays a role in the regulation of phosphate uptake
GOMJABIG_00468 4e-59 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
GOMJABIG_00470 2.6e-269 T PhoQ Sensor
GOMJABIG_00471 2e-129 K Transcriptional regulatory protein, C terminal
GOMJABIG_00472 6e-67 S SdpI/YhfL protein family
GOMJABIG_00473 8e-190 manA 5.3.1.8 G mannose-6-phosphate isomerase
GOMJABIG_00474 1.3e-223 patB 4.4.1.8 E Aminotransferase, class I
GOMJABIG_00475 6.2e-96 M Protein of unknown function (DUF3737)
GOMJABIG_00476 0.0 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
GOMJABIG_00478 1e-226 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GOMJABIG_00479 1.6e-185 ytxK 2.1.1.72 L N-6 DNA Methylase
GOMJABIG_00480 6.7e-87 comGF U Putative Competence protein ComGF
GOMJABIG_00481 1.1e-09
GOMJABIG_00482 3.1e-58
GOMJABIG_00483 3.6e-40 comGC U Required for transformation and DNA binding
GOMJABIG_00484 2.7e-172 comGB NU type II secretion system
GOMJABIG_00485 1.5e-180 comGA NU Type II IV secretion system protein
GOMJABIG_00486 1.5e-132 yebC K Transcriptional regulatory protein
GOMJABIG_00487 4e-95 S VanZ like family
GOMJABIG_00488 1.2e-214 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GOMJABIG_00489 1.8e-164 znuA P Belongs to the bacterial solute-binding protein 9 family
GOMJABIG_00490 2e-146 yisY 1.11.1.10 S Alpha/beta hydrolase family
GOMJABIG_00491 1.4e-114
GOMJABIG_00492 2.7e-198 S Putative adhesin
GOMJABIG_00493 3.4e-61 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GOMJABIG_00494 7.7e-67 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GOMJABIG_00495 2.9e-148 S Sucrose-6F-phosphate phosphohydrolase
GOMJABIG_00496 4.5e-255 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GOMJABIG_00497 7.6e-172 ybbR S YbbR-like protein
GOMJABIG_00498 2.9e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
GOMJABIG_00499 3.9e-209 potD P ABC transporter
GOMJABIG_00500 2.9e-137 potC P ABC transporter permease
GOMJABIG_00501 1.2e-130 potB P ABC transporter permease
GOMJABIG_00502 2.1e-202 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
GOMJABIG_00503 9e-167 murB 1.3.1.98 M Cell wall formation
GOMJABIG_00504 1.2e-99 dnaQ 2.7.7.7 L DNA polymerase III
GOMJABIG_00505 3.8e-84 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
GOMJABIG_00506 1.6e-177 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
GOMJABIG_00507 2.8e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GOMJABIG_00508 5.8e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
GOMJABIG_00509 4.4e-94
GOMJABIG_00510 1.2e-76
GOMJABIG_00511 7.7e-108 3.2.2.20 K acetyltransferase
GOMJABIG_00512 3.9e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
GOMJABIG_00513 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
GOMJABIG_00514 1.9e-28 secG U Preprotein translocase
GOMJABIG_00515 3.1e-245 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GOMJABIG_00516 1.1e-141 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GOMJABIG_00517 4.6e-227 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
GOMJABIG_00518 3.2e-189 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
GOMJABIG_00519 1.4e-187 cggR K Putative sugar-binding domain
GOMJABIG_00521 1.8e-278 ycaM E amino acid
GOMJABIG_00522 2.1e-100 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GOMJABIG_00523 6.2e-171 whiA K May be required for sporulation
GOMJABIG_00524 5.8e-194 ybhK S Required for morphogenesis under gluconeogenic growth conditions
GOMJABIG_00525 1.6e-160 rapZ S Displays ATPase and GTPase activities
GOMJABIG_00526 8.1e-91 S Short repeat of unknown function (DUF308)
GOMJABIG_00527 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
GOMJABIG_00528 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
GOMJABIG_00529 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
GOMJABIG_00530 8e-161 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
GOMJABIG_00531 1.3e-255 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
GOMJABIG_00532 6.1e-208 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
GOMJABIG_00533 0.0 lacZ 3.2.1.23 G -beta-galactosidase
GOMJABIG_00534 0.0 lacS G Transporter
GOMJABIG_00535 9.3e-189 lacR K Transcriptional regulator
GOMJABIG_00536 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
GOMJABIG_00537 2e-185 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
GOMJABIG_00538 1.3e-190 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
GOMJABIG_00539 1e-173 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
GOMJABIG_00540 4.8e-185 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
GOMJABIG_00541 1.2e-157 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GOMJABIG_00542 4.7e-174 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
GOMJABIG_00543 7.6e-24
GOMJABIG_00544 3.4e-183 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
GOMJABIG_00545 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GOMJABIG_00546 1.3e-96 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GOMJABIG_00547 9.7e-126 comFC S Competence protein
GOMJABIG_00548 2.9e-226 comFA L Helicase C-terminal domain protein
GOMJABIG_00549 4.3e-118 yvyE 3.4.13.9 S YigZ family
GOMJABIG_00550 1.6e-192 tagO 2.7.8.33, 2.7.8.35 M transferase
GOMJABIG_00551 1.4e-191 rny S Endoribonuclease that initiates mRNA decay
GOMJABIG_00552 3.5e-194 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GOMJABIG_00553 1.4e-96 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GOMJABIG_00554 3.4e-125 ymfM S Helix-turn-helix domain
GOMJABIG_00555 6.6e-128 IQ Enoyl-(Acyl carrier protein) reductase
GOMJABIG_00556 3.4e-225 S Peptidase M16
GOMJABIG_00557 9e-223 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
GOMJABIG_00558 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
GOMJABIG_00559 1.7e-75 WQ51_03320 S Protein of unknown function (DUF1149)
GOMJABIG_00560 4.6e-105 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
GOMJABIG_00561 1.5e-209 yubA S AI-2E family transporter
GOMJABIG_00562 4.9e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
GOMJABIG_00563 2.2e-201 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
GOMJABIG_00564 1.7e-237 N Uncharacterized conserved protein (DUF2075)
GOMJABIG_00565 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
GOMJABIG_00566 1.1e-169 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GOMJABIG_00567 2.5e-152 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GOMJABIG_00568 5.2e-113 yjbM 2.7.6.5 S RelA SpoT domain protein
GOMJABIG_00569 7.4e-112 yjbK S CYTH
GOMJABIG_00570 8.2e-108 yjbH Q Thioredoxin
GOMJABIG_00571 4.5e-158 coiA 3.6.4.12 S Competence protein
GOMJABIG_00572 9.5e-118 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
GOMJABIG_00573 1e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
GOMJABIG_00574 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GOMJABIG_00575 4.2e-40 ptsH G phosphocarrier protein HPR
GOMJABIG_00576 5.9e-25
GOMJABIG_00577 0.0 clpE O Belongs to the ClpA ClpB family
GOMJABIG_00578 1.6e-42 XK27_09445 S Domain of unknown function (DUF1827)
GOMJABIG_00579 1.5e-302 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
GOMJABIG_00580 3.6e-157 hlyX S Transporter associated domain
GOMJABIG_00581 8.8e-78
GOMJABIG_00582 1.8e-89
GOMJABIG_00583 2.4e-112 ygaC J Belongs to the UPF0374 family
GOMJABIG_00584 1.6e-146 recX 2.4.1.337 GT4 S Regulatory protein RecX
GOMJABIG_00585 3.9e-262 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GOMJABIG_00586 8.4e-218 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
GOMJABIG_00587 1.9e-220 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
GOMJABIG_00588 3.2e-217 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
GOMJABIG_00589 8.7e-181 D Alpha beta
GOMJABIG_00591 1.9e-147 S haloacid dehalogenase-like hydrolase
GOMJABIG_00592 1.2e-203 EGP Major facilitator Superfamily
GOMJABIG_00593 7.1e-261 glnA 6.3.1.2 E glutamine synthetase
GOMJABIG_00594 2.3e-170 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GOMJABIG_00595 8.1e-19 S Protein of unknown function (DUF3042)
GOMJABIG_00596 5.1e-58 yqhL P Rhodanese-like protein
GOMJABIG_00597 7.9e-35 yqgQ S Bacterial protein of unknown function (DUF910)
GOMJABIG_00598 4e-119 gluP 3.4.21.105 S Rhomboid family
GOMJABIG_00599 7.4e-95 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
GOMJABIG_00600 7.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
GOMJABIG_00601 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
GOMJABIG_00602 0.0 S membrane
GOMJABIG_00603 4e-65 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GOMJABIG_00604 7.2e-203 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GOMJABIG_00605 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GOMJABIG_00606 3.8e-201 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GOMJABIG_00607 6.2e-63 yodB K Transcriptional regulator, HxlR family
GOMJABIG_00608 1.1e-136 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GOMJABIG_00609 9.4e-43 acyP 3.6.1.7 C Belongs to the acylphosphatase family
GOMJABIG_00610 3e-168 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GOMJABIG_00611 4e-276 arlS 2.7.13.3 T Histidine kinase
GOMJABIG_00612 1.1e-130 K response regulator
GOMJABIG_00613 4.2e-95 yceD S Uncharacterized ACR, COG1399
GOMJABIG_00614 2.9e-218 ylbM S Belongs to the UPF0348 family
GOMJABIG_00615 3.7e-60 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
GOMJABIG_00616 1.7e-110 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
GOMJABIG_00617 4.8e-119 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GOMJABIG_00618 1.4e-209 yqeH S Ribosome biogenesis GTPase YqeH
GOMJABIG_00619 1.4e-87 yqeG S HAD phosphatase, family IIIA
GOMJABIG_00620 1.2e-183 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
GOMJABIG_00621 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GOMJABIG_00622 2.4e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
GOMJABIG_00623 4e-87 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GOMJABIG_00624 6.2e-235 S CAAX protease self-immunity
GOMJABIG_00625 2.1e-73 S Protein of unknown function (DUF3021)
GOMJABIG_00626 1.1e-74 K LytTr DNA-binding domain
GOMJABIG_00627 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GOMJABIG_00628 1.4e-159 dnaI L Primosomal protein DnaI
GOMJABIG_00629 1.1e-245 dnaB L Replication initiation and membrane attachment
GOMJABIG_00630 7.8e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GOMJABIG_00631 1.7e-102 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GOMJABIG_00632 3.1e-158 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
GOMJABIG_00633 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GOMJABIG_00634 4.1e-253 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
GOMJABIG_00635 2.3e-84 cutC P Participates in the control of copper homeostasis
GOMJABIG_00636 1.2e-120 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GOMJABIG_00637 5.6e-55 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
GOMJABIG_00638 1.9e-09
GOMJABIG_00639 6.7e-44
GOMJABIG_00640 3.4e-123 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
GOMJABIG_00641 4.3e-225 ecsB U ABC transporter
GOMJABIG_00642 3.7e-134 ecsA V ABC transporter, ATP-binding protein
GOMJABIG_00643 9.2e-77 hit FG Scavenger mRNA decapping enzyme C-term binding
GOMJABIG_00644 2e-51
GOMJABIG_00645 9.5e-24 S YtxH-like protein
GOMJABIG_00646 2.1e-147 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
GOMJABIG_00647 2.7e-146 yxeH S hydrolase
GOMJABIG_00648 1.8e-170 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
GOMJABIG_00649 2.9e-279 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
GOMJABIG_00650 1.5e-210 ulaA 2.7.1.194 S PTS system sugar-specific permease component
GOMJABIG_00651 2e-38 ulaB 2.7.1.194 G Phosphotransferase system galactitol-specific IIB component
GOMJABIG_00652 1.7e-41 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GOMJABIG_00653 3.5e-142 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GOMJABIG_00655 3e-184 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
GOMJABIG_00656 0.0 L AAA domain
GOMJABIG_00657 1.5e-217 yhaO L Ser Thr phosphatase family protein
GOMJABIG_00658 9.5e-56 yheA S Belongs to the UPF0342 family
GOMJABIG_00659 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
GOMJABIG_00660 4.3e-139 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GOMJABIG_00661 1.6e-96 L Belongs to the 'phage' integrase family
GOMJABIG_00662 2.1e-17 K Transcriptional
GOMJABIG_00663 1.4e-14
GOMJABIG_00664 3.2e-68 yslB S Protein of unknown function (DUF2507)
GOMJABIG_00665 8.5e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
GOMJABIG_00666 4.5e-117 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GOMJABIG_00667 5.7e-214 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GOMJABIG_00668 4.2e-132 ykuT M mechanosensitive ion channel
GOMJABIG_00669 1.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
GOMJABIG_00670 4e-48
GOMJABIG_00671 4.7e-210 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
GOMJABIG_00672 8e-177 ccpA K catabolite control protein A
GOMJABIG_00673 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M Penicillin binding protein transpeptidase domain
GOMJABIG_00674 6.9e-275 pepV 3.5.1.18 E dipeptidase PepV
GOMJABIG_00675 6.2e-268 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
GOMJABIG_00676 3.3e-55
GOMJABIG_00677 1.5e-269 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
GOMJABIG_00678 2.4e-95 yutD S Protein of unknown function (DUF1027)
GOMJABIG_00679 2e-146 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
GOMJABIG_00680 2.7e-98 S Protein of unknown function (DUF1461)
GOMJABIG_00681 5.2e-116 dedA S SNARE-like domain protein
GOMJABIG_00682 3.1e-178 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
GOMJABIG_00683 3.2e-62 yugI 5.3.1.9 J general stress protein
GOMJABIG_00684 3e-102 UW LPXTG-motif cell wall anchor domain protein
GOMJABIG_00685 3.6e-307 gadC E Contains amino acid permease domain
GOMJABIG_00686 2.7e-211 secY2 U Part of the accessory SecA2 SecY2 system specifically required for export of
GOMJABIG_00687 1.9e-283 asp1 S Accessory Sec system protein Asp1
GOMJABIG_00688 1.8e-300 asp2 3.4.11.5 S Accessory Sec system GspB-transporter
GOMJABIG_00689 4e-156 asp3 S Accessory Sec secretory system ASP3
GOMJABIG_00690 0.0 secA2 U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GOMJABIG_00691 1.2e-293 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
GOMJABIG_00692 1.1e-258 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
GOMJABIG_00695 3.7e-24 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GOMJABIG_00696 1.1e-08 G YdjC-like protein
GOMJABIG_00697 8.5e-15 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
GOMJABIG_00698 3.1e-114
GOMJABIG_00699 1.8e-56 speG J Acetyltransferase (GNAT) domain
GOMJABIG_00700 3e-28 speG J Acetyltransferase (GNAT) domain
GOMJABIG_00701 1e-67 K sequence-specific DNA binding
GOMJABIG_00702 3.8e-39 S SnoaL-like domain
GOMJABIG_00703 9.9e-51 S Protein of unknown function (DUF975)
GOMJABIG_00704 3.1e-132 qmcA O prohibitin homologues
GOMJABIG_00705 8.3e-184 P ABC transporter
GOMJABIG_00706 4e-287 V ABC-type multidrug transport system, ATPase and permease components
GOMJABIG_00707 8.6e-240 eno2 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GOMJABIG_00708 8.6e-202 yhjX P Major Facilitator Superfamily
GOMJABIG_00709 2.7e-111 nss M transferase activity, transferring glycosyl groups
GOMJABIG_00710 6.2e-47 nss M transferase activity, transferring glycosyl groups
GOMJABIG_00727 3.4e-61
GOMJABIG_00739 3e-215 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
GOMJABIG_00740 2.5e-197 cpoA GT4 M Glycosyltransferase, group 1 family protein
GOMJABIG_00741 5e-182 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
GOMJABIG_00742 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GOMJABIG_00743 9.1e-23 UW Tetratricopeptide repeat
GOMJABIG_00744 4.4e-17 K Transcriptional regulator, AbiEi antitoxin
GOMJABIG_00746 0.0 GT2,GT4 M family 8
GOMJABIG_00747 3.4e-307 GT2,GT4 M family 8
GOMJABIG_00748 1.2e-206 GT2,GT4 M family 8
GOMJABIG_00749 2.2e-218 I Protein of unknown function (DUF2974)
GOMJABIG_00750 0.0
GOMJABIG_00752 5.6e-96 cadD P Cadmium resistance transporter
GOMJABIG_00753 9.2e-59 cadX K Bacterial regulatory protein, arsR family
GOMJABIG_00754 2.5e-15 S the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts
GOMJABIG_00755 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
GOMJABIG_00756 1.2e-244 cycA E Amino acid permease
GOMJABIG_00758 4.9e-157 mntH P H( )-stimulated, divalent metal cation uptake system
GOMJABIG_00759 4.9e-139 H Nodulation protein S (NodS)
GOMJABIG_00761 1.4e-186 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GOMJABIG_00762 8.3e-23 C Oxidoreductase
GOMJABIG_00764 2.7e-173 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
GOMJABIG_00765 1.5e-115 drgA C nitroreductase
GOMJABIG_00766 6.2e-28 L An automated process has identified a potential problem with this gene model
GOMJABIG_00767 1.6e-48 lysC 2.7.2.4 E Belongs to the aspartokinase family
GOMJABIG_00768 4.3e-23 lysC 2.7.2.4 E Belongs to the aspartokinase family
GOMJABIG_00769 0.0 pepO 3.4.24.71 O Peptidase family M13
GOMJABIG_00770 3.7e-125 alkD L DNA alkylation repair enzyme
GOMJABIG_00771 7.6e-208 M Glycosyl transferases group 1
GOMJABIG_00772 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
GOMJABIG_00773 8.5e-104 pncA Q Isochorismatase family
GOMJABIG_00774 5.2e-90 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GOMJABIG_00775 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
GOMJABIG_00776 7.4e-208 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
GOMJABIG_00777 1e-232 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
GOMJABIG_00778 3.5e-177 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
GOMJABIG_00779 2.3e-93 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GOMJABIG_00780 2.8e-168 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
GOMJABIG_00781 1.4e-127 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
GOMJABIG_00782 1e-116 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GOMJABIG_00783 2.9e-301 I Protein of unknown function (DUF2974)
GOMJABIG_00784 3.9e-145 yxeH S hydrolase
GOMJABIG_00785 5.1e-174 XK27_05540 S DUF218 domain
GOMJABIG_00786 2.1e-49 ybjQ S Belongs to the UPF0145 family
GOMJABIG_00787 2.3e-262 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
GOMJABIG_00788 2.4e-173
GOMJABIG_00789 9.2e-130
GOMJABIG_00790 4.4e-103 lepB 3.4.21.89 U Belongs to the peptidase S26 family
GOMJABIG_00791 1.4e-21
GOMJABIG_00792 1.2e-136
GOMJABIG_00793 8.4e-140
GOMJABIG_00794 3.6e-123 skfE V ATPases associated with a variety of cellular activities
GOMJABIG_00795 3.6e-58 yvoA_1 K Transcriptional regulator, GntR family
GOMJABIG_00796 9.2e-247 pepT 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
GOMJABIG_00797 1.2e-151 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
GOMJABIG_00798 1e-120 trmK 2.1.1.217 S SAM-dependent methyltransferase
GOMJABIG_00799 6.5e-143 cjaA ET ABC transporter substrate-binding protein
GOMJABIG_00800 1.1e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GOMJABIG_00801 8.6e-106 P ABC transporter permease
GOMJABIG_00802 1.3e-114 papP P ABC transporter, permease protein
GOMJABIG_00803 2.9e-199 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
GOMJABIG_00804 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
GOMJABIG_00805 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
GOMJABIG_00806 2.7e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
GOMJABIG_00807 4.4e-135 recO L Involved in DNA repair and RecF pathway recombination
GOMJABIG_00808 4.3e-169 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GOMJABIG_00809 4.4e-81 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GOMJABIG_00810 2.6e-172 phoH T phosphate starvation-inducible protein PhoH
GOMJABIG_00811 5.2e-43 yqeY S YqeY-like protein
GOMJABIG_00812 1.5e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
GOMJABIG_00813 1.7e-156 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
GOMJABIG_00814 5.4e-50 S Iron-sulfur cluster assembly protein
GOMJABIG_00815 5.1e-151 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
GOMJABIG_00816 4.6e-120 sdaAB 4.3.1.17 E Serine dehydratase beta chain
GOMJABIG_00817 4.5e-155 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GOMJABIG_00818 1.6e-102 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GOMJABIG_00820 4.2e-141 E GDSL-like Lipase/Acylhydrolase family
GOMJABIG_00821 8.2e-78 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
GOMJABIG_00822 2e-219 patA 2.6.1.1 E Aminotransferase
GOMJABIG_00823 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
GOMJABIG_00824 8.9e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
GOMJABIG_00825 7.3e-74 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GOMJABIG_00826 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GOMJABIG_00827 2.4e-65
GOMJABIG_00828 5.1e-173 prmA J Ribosomal protein L11 methyltransferase
GOMJABIG_00829 5.3e-68 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GOMJABIG_00830 4.2e-210 S Bacterial membrane protein, YfhO
GOMJABIG_00831 1.7e-86 S Psort location CytoplasmicMembrane, score
GOMJABIG_00832 5.9e-30 S Bacterial membrane protein, YfhO
GOMJABIG_00833 0.0 S Bacterial membrane protein, YfhO
GOMJABIG_00834 0.0 aha1 P E1-E2 ATPase
GOMJABIG_00835 1.1e-184 ansA 3.5.1.1 EJ L-asparaginase, type I
GOMJABIG_00836 1.2e-242 yjjP S Putative threonine/serine exporter
GOMJABIG_00837 7.5e-169 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
GOMJABIG_00838 8e-260 frdC 1.3.5.4 C FAD binding domain
GOMJABIG_00839 1e-265 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
GOMJABIG_00840 1.8e-66 metI P ABC transporter permease
GOMJABIG_00841 1.1e-184 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GOMJABIG_00842 1.8e-156 metQ1 P Belongs to the nlpA lipoprotein family
GOMJABIG_00843 1.4e-53 L nuclease
GOMJABIG_00844 2.3e-140 F DNA/RNA non-specific endonuclease
GOMJABIG_00845 2.3e-48 K Helix-turn-helix domain
GOMJABIG_00846 1.2e-188 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GOMJABIG_00847 1.3e-304 ybiT S ABC transporter, ATP-binding protein
GOMJABIG_00848 2.8e-18 S Sugar efflux transporter for intercellular exchange
GOMJABIG_00849 6.2e-246 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GOMJABIG_00850 2.2e-102 3.6.1.27 I Acid phosphatase homologues
GOMJABIG_00852 2.7e-105 S N-acetylmuramoyl-L-alanine amidase activity
GOMJABIG_00853 2.9e-37 S Bacteriophage holin of superfamily 6 (Holin_LLH)
GOMJABIG_00854 7.7e-14
GOMJABIG_00855 1.6e-29
GOMJABIG_00856 7.7e-70
GOMJABIG_00857 6.2e-101 E GDSL-like Lipase/Acylhydrolase
GOMJABIG_00858 2.1e-59
GOMJABIG_00859 0.0 M Prophage endopeptidase tail
GOMJABIG_00860 6.7e-129 S phage tail
GOMJABIG_00861 1.5e-181 Z012_10445 D Phage tail tape measure protein
GOMJABIG_00862 3.8e-15
GOMJABIG_00863 9.4e-41 S Phage tail assembly chaperone protein, TAC
GOMJABIG_00864 1.8e-81 S Phage tail tube protein
GOMJABIG_00865 4.6e-43 S Protein of unknown function (DUF3168)
GOMJABIG_00866 3.2e-25 S Bacteriophage HK97-gp10, putative tail-component
GOMJABIG_00867 1.2e-24
GOMJABIG_00868 1.8e-35 S Phage gp6-like head-tail connector protein
GOMJABIG_00869 1.9e-63
GOMJABIG_00870 7.1e-11 S aminoacyl-tRNA ligase activity
GOMJABIG_00873 3.3e-116 S Phage Mu protein F like protein
GOMJABIG_00874 2.2e-119 S Phage portal protein, SPP1 Gp6-like
GOMJABIG_00875 3.6e-142 ps334 S Terminase-like family
GOMJABIG_00876 2.2e-63
GOMJABIG_00877 7.3e-118
GOMJABIG_00878 5.5e-92 S Super-infection exclusion protein B
GOMJABIG_00880 1.9e-50 S VRR-NUC domain
GOMJABIG_00884 1.4e-14
GOMJABIG_00888 1.7e-190 S Virulence-associated protein E
GOMJABIG_00889 1.8e-102 S Bifunctional DNA primase/polymerase, N-terminal
GOMJABIG_00890 4.7e-27
GOMJABIG_00892 1.6e-39
GOMJABIG_00893 1.6e-108 L AAA domain
GOMJABIG_00895 3e-208 res L Helicase C-terminal domain protein
GOMJABIG_00898 5.6e-43 S Siphovirus Gp157
GOMJABIG_00900 1.5e-15
GOMJABIG_00901 4.1e-30
GOMJABIG_00905 1.8e-17 ps115 K sequence-specific DNA binding
GOMJABIG_00906 3.7e-17 S Pfam:Peptidase_M78
GOMJABIG_00907 1.1e-09
GOMJABIG_00909 3.4e-219 sip L Belongs to the 'phage' integrase family
GOMJABIG_00911 3e-156 lysR5 K LysR substrate binding domain
GOMJABIG_00912 0.0 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
GOMJABIG_00913 3e-251 G Major Facilitator
GOMJABIG_00914 3.1e-92 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
GOMJABIG_00915 4.8e-187 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GOMJABIG_00916 3.1e-281 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOMJABIG_00917 5.1e-276 yjeM E Amino Acid
GOMJABIG_00918 4.8e-96 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GOMJABIG_00919 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
GOMJABIG_00920 2.7e-18 ps115 K sequence-specific DNA binding
GOMJABIG_00921 9.5e-14 E Zn peptidase
GOMJABIG_00923 2e-22 L Belongs to the 'phage' integrase family
GOMJABIG_00924 2.9e-22 S Phage integrase family
GOMJABIG_00925 3.5e-123 srtA 3.4.22.70 M sortase family
GOMJABIG_00926 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
GOMJABIG_00927 1.3e-173 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
GOMJABIG_00928 0.0 dnaK O Heat shock 70 kDa protein
GOMJABIG_00929 2.5e-77 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GOMJABIG_00930 4.2e-192 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
GOMJABIG_00931 4.7e-98 S GyrI-like small molecule binding domain
GOMJABIG_00932 8.5e-279 lsa S ABC transporter
GOMJABIG_00933 2.7e-174 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
GOMJABIG_00934 5.7e-166 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GOMJABIG_00935 3.5e-61 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GOMJABIG_00936 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GOMJABIG_00937 7.1e-47 rplGA J ribosomal protein
GOMJABIG_00938 1.5e-46 ylxR K Protein of unknown function (DUF448)
GOMJABIG_00939 2.1e-219 nusA K Participates in both transcription termination and antitermination
GOMJABIG_00940 4.7e-82 rimP J Required for maturation of 30S ribosomal subunits
GOMJABIG_00941 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GOMJABIG_00942 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
GOMJABIG_00943 7.9e-230 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
GOMJABIG_00944 1.5e-138 cdsA 2.7.7.41 S Belongs to the CDS family
GOMJABIG_00945 2.5e-135 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GOMJABIG_00946 2.6e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
GOMJABIG_00947 9.2e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
GOMJABIG_00948 5.9e-183 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GOMJABIG_00949 5.8e-138 rpsB J Belongs to the universal ribosomal protein uS2 family
GOMJABIG_00950 6.7e-195 yabB 2.1.1.223 L Methyltransferase small domain
GOMJABIG_00951 2.6e-117 plsC 2.3.1.51 I Acyltransferase
GOMJABIG_00952 5.7e-230 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
GOMJABIG_00953 8.8e-283 mdlB V ABC transporter
GOMJABIG_00954 0.0 mdlA V ABC transporter
GOMJABIG_00955 1.9e-30 yneF S Uncharacterised protein family (UPF0154)
GOMJABIG_00956 2.5e-34 ynzC S UPF0291 protein
GOMJABIG_00957 1e-113 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GOMJABIG_00958 2.1e-117 ung2 3.2.2.27 L Uracil-DNA glycosylase
GOMJABIG_00959 4.6e-73 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
GOMJABIG_00960 6e-117 lepB 3.4.21.89 U Belongs to the peptidase S26 family
GOMJABIG_00961 1e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
GOMJABIG_00962 1.1e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
GOMJABIG_00963 3.1e-95 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GOMJABIG_00964 2.8e-174 L Psort location Cytoplasmic, score
GOMJABIG_00965 6.8e-237 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GOMJABIG_00967 5.6e-10
GOMJABIG_00971 2.4e-203 L COG2826 Transposase and inactivated derivatives, IS30 family
GOMJABIG_00972 1e-193 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GOMJABIG_00973 1.9e-217 aspC 2.6.1.1 E Aminotransferase
GOMJABIG_00974 8.6e-142 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
GOMJABIG_00975 1.9e-175 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GOMJABIG_00976 1.7e-191 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
GOMJABIG_00977 4.4e-76 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
GOMJABIG_00978 1.1e-245 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
GOMJABIG_00979 3.8e-254 lysC 2.7.2.4 E Belongs to the aspartokinase family
GOMJABIG_00980 1.2e-185 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
GOMJABIG_00981 5.6e-117 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GOMJABIG_00982 1.7e-246 brnQ U Component of the transport system for branched-chain amino acids
GOMJABIG_00983 2.1e-73 S Putative adhesin
GOMJABIG_00984 1.1e-60 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
GOMJABIG_00985 5.4e-11 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
GOMJABIG_00986 2e-88 S Peptidase propeptide and YPEB domain
GOMJABIG_00987 2.2e-238 T GHKL domain
GOMJABIG_00988 8.2e-128 T Transcriptional regulatory protein, C terminal
GOMJABIG_00989 2e-117 3.6.1.55 F NUDIX domain
GOMJABIG_00990 5.6e-109 yihX 3.1.3.10, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GOMJABIG_00991 1.4e-111 S Protein of unknown function (DUF1211)
GOMJABIG_00992 0.0 sprD D Domain of Unknown Function (DUF1542)
GOMJABIG_00993 9.8e-71 K LytTr DNA-binding domain
GOMJABIG_00994 4.5e-65 S Protein of unknown function (DUF3021)
GOMJABIG_00995 1.6e-134 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
GOMJABIG_00996 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
GOMJABIG_00997 8.5e-81 XK26_02160 S Pyridoxamine 5'-phosphate oxidase
GOMJABIG_00998 1.8e-276 lsa S ABC transporter
GOMJABIG_00999 7.5e-178 MA20_14895 S Conserved hypothetical protein 698
GOMJABIG_01000 7.6e-203 L Putative transposase DNA-binding domain
GOMJABIG_01001 1.2e-71
GOMJABIG_01003 1.2e-100 S LexA-binding, inner membrane-associated putative hydrolase
GOMJABIG_01004 1.2e-95 K LysR substrate binding domain
GOMJABIG_01005 3.2e-177 lacX 5.1.3.3 G Aldose 1-epimerase
GOMJABIG_01006 8.2e-252 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
GOMJABIG_01007 4.3e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
GOMJABIG_01008 2.7e-171 xerC D Phage integrase, N-terminal SAM-like domain
GOMJABIG_01009 7.5e-247 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
GOMJABIG_01010 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GOMJABIG_01011 1.2e-152 dprA LU DNA protecting protein DprA
GOMJABIG_01012 1.1e-133 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GOMJABIG_01013 1.9e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
GOMJABIG_01014 4.3e-264 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
GOMJABIG_01015 1.6e-35 yozE S Belongs to the UPF0346 family
GOMJABIG_01016 1.2e-149 DegV S Uncharacterised protein, DegV family COG1307
GOMJABIG_01017 1.3e-114 hlyIII S protein, hemolysin III
GOMJABIG_01018 1.5e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
GOMJABIG_01019 1.9e-161 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GOMJABIG_01020 9.3e-63 2.5.1.74 H UbiA prenyltransferase family
GOMJABIG_01021 0.0 L Helicase C-terminal domain protein
GOMJABIG_01022 3.7e-54 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
GOMJABIG_01023 1.3e-16
GOMJABIG_01025 1.3e-13
GOMJABIG_01026 1e-130 mrr L restriction endonuclease
GOMJABIG_01028 0.0 hsdR 3.1.21.3 V EcoEI R protein C-terminal
GOMJABIG_01029 5.1e-66 V Type I restriction modification DNA specificity domain
GOMJABIG_01030 6.6e-176 L Belongs to the 'phage' integrase family
GOMJABIG_01031 6.3e-98 3.1.21.3 V Type I restriction modification DNA specificity domain
GOMJABIG_01032 3.7e-285 hsdM 2.1.1.72 V type I restriction-modification system
GOMJABIG_01033 8.2e-227 S Tetratricopeptide repeat protein
GOMJABIG_01034 6.7e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
GOMJABIG_01035 5.3e-245 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
GOMJABIG_01036 6e-219 rpsA 1.17.7.4 J Ribosomal protein S1
GOMJABIG_01037 2.1e-117 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
GOMJABIG_01038 2.4e-96 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GOMJABIG_01039 3e-62 M Lysin motif
GOMJABIG_01040 1.2e-129 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GOMJABIG_01041 1.7e-105 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GOMJABIG_01042 5.9e-132 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
GOMJABIG_01043 1.8e-62 ribT K acetyltransferase
GOMJABIG_01044 2.8e-165 xerD D recombinase XerD
GOMJABIG_01045 1.2e-166 cvfB S S1 domain
GOMJABIG_01046 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
GOMJABIG_01047 3.6e-182 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
GOMJABIG_01048 0.0 dnaE 2.7.7.7 L DNA polymerase
GOMJABIG_01049 2e-26 S Protein of unknown function (DUF2929)
GOMJABIG_01050 1.7e-306 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
GOMJABIG_01051 1e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
GOMJABIG_01052 7.5e-47 yrvD S Lipopolysaccharide assembly protein A domain
GOMJABIG_01053 1.2e-143 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
GOMJABIG_01054 6.1e-179 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
GOMJABIG_01055 0.0 oatA I Acyltransferase
GOMJABIG_01056 2.7e-241 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GOMJABIG_01057 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
GOMJABIG_01058 7e-175 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
GOMJABIG_01059 4.6e-90 dedA 3.1.3.1 S SNARE associated Golgi protein
GOMJABIG_01060 1.3e-148 xerD L Phage integrase, N-terminal SAM-like domain
GOMJABIG_01061 5.1e-116 GM NmrA-like family
GOMJABIG_01062 3.8e-246 yagE E amino acid
GOMJABIG_01064 2.9e-98 S Rib/alpha-like repeat
GOMJABIG_01065 1.1e-65 S Domain of unknown function DUF1828
GOMJABIG_01066 2.5e-68
GOMJABIG_01067 5.4e-33
GOMJABIG_01068 3.1e-80 mutT 3.6.1.55 F NUDIX domain
GOMJABIG_01069 2.5e-62
GOMJABIG_01071 4.7e-163 htpX O Peptidase family M48
GOMJABIG_01072 1.2e-60 L helicase
GOMJABIG_01073 9.9e-101 L helicase
GOMJABIG_01074 1.3e-31 S Domain of unknown function (DUF1837)
GOMJABIG_01075 4.8e-114 2.7.1.202 GKT Mga helix-turn-helix domain
GOMJABIG_01076 1.9e-235 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GOMJABIG_01077 1.3e-25 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
GOMJABIG_01078 5.4e-130 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GOMJABIG_01079 1.6e-35 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
GOMJABIG_01080 3.5e-137 K SIR2-like domain
GOMJABIG_01081 1.5e-102 L reverse transcriptase
GOMJABIG_01082 4.5e-188 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
GOMJABIG_01083 5.7e-117 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
GOMJABIG_01084 8.7e-167 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
GOMJABIG_01085 2e-207 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
GOMJABIG_01086 2.5e-217 KQ helix_turn_helix, mercury resistance
GOMJABIG_01087 0.0 S KAP family P-loop domain
GOMJABIG_01088 4.8e-37 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GOMJABIG_01089 1.1e-35 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GOMJABIG_01090 2.3e-32 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GOMJABIG_01092 6.8e-20
GOMJABIG_01094 5.6e-13 L Integrase core domain
GOMJABIG_01095 0.0 L AAA domain
GOMJABIG_01096 1.5e-253 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
GOMJABIG_01097 1.2e-210 glf 5.4.99.9 M UDP-galactopyranose mutase
GOMJABIG_01098 2e-83 wbbI M transferase activity, transferring glycosyl groups
GOMJABIG_01101 1.9e-183 S AAA domain
GOMJABIG_01102 9.2e-124 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GOMJABIG_01103 4.4e-12
GOMJABIG_01104 1.4e-40
GOMJABIG_01105 7.8e-208 L Putative transposase DNA-binding domain
GOMJABIG_01106 7.7e-155 czcD P cation diffusion facilitator family transporter
GOMJABIG_01107 3.8e-51 K Transcriptional regulator, ArsR family
GOMJABIG_01108 5.6e-129 pgm3 G Belongs to the phosphoglycerate mutase family
GOMJABIG_01109 1.1e-109 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
GOMJABIG_01110 1.2e-149 1.6.5.2 GM NmrA-like family
GOMJABIG_01111 8.9e-99 K Transcriptional regulator C-terminal region
GOMJABIG_01112 1.8e-196 S membrane
GOMJABIG_01113 1.9e-115 GM NAD(P)H-binding
GOMJABIG_01114 1e-125 cobB K Sir2 family
GOMJABIG_01115 0.0 LV site-specific DNA-methyltransferase (adenine-specific) activity
GOMJABIG_01116 1.6e-92 LV site-specific DNA-methyltransferase (adenine-specific) activity
GOMJABIG_01117 1.5e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
GOMJABIG_01118 5e-78 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GOMJABIG_01119 6.7e-150 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
GOMJABIG_01120 1.3e-140 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GOMJABIG_01121 1.6e-160 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GOMJABIG_01122 1.1e-150 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GOMJABIG_01123 1.1e-60 rplQ J Ribosomal protein L17
GOMJABIG_01124 9.6e-172 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GOMJABIG_01125 2.6e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GOMJABIG_01126 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GOMJABIG_01127 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
GOMJABIG_01128 1.4e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GOMJABIG_01129 4.5e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
GOMJABIG_01130 4.5e-236 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
GOMJABIG_01131 1.3e-70 rplO J Binds to the 23S rRNA
GOMJABIG_01132 1.4e-23 rpmD J Ribosomal protein L30
GOMJABIG_01133 1.9e-76 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GOMJABIG_01134 1.5e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GOMJABIG_01135 2.9e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GOMJABIG_01136 2.1e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GOMJABIG_01137 2.3e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GOMJABIG_01138 7.2e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GOMJABIG_01139 1.1e-34 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GOMJABIG_01140 5.6e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GOMJABIG_01141 7.7e-42 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GOMJABIG_01142 2.2e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
GOMJABIG_01143 6.6e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GOMJABIG_01144 7.2e-121 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GOMJABIG_01145 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GOMJABIG_01146 1.5e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GOMJABIG_01147 1.6e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GOMJABIG_01148 1.7e-45 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
GOMJABIG_01149 1e-105 rplD J Forms part of the polypeptide exit tunnel
GOMJABIG_01150 4.8e-111 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GOMJABIG_01151 5.8e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
GOMJABIG_01152 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GOMJABIG_01153 1e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
GOMJABIG_01154 3.5e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GOMJABIG_01155 1.3e-106 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
GOMJABIG_01156 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GOMJABIG_01157 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GOMJABIG_01158 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GOMJABIG_01160 1.6e-08
GOMJABIG_01161 6.2e-301 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
GOMJABIG_01162 1.3e-190 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GOMJABIG_01163 1.9e-161 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
GOMJABIG_01164 0.0 S membrane
GOMJABIG_01165 0.0 S membrane
GOMJABIG_01166 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GOMJABIG_01167 1e-243 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
GOMJABIG_01168 4.9e-60 yabR J S1 RNA binding domain
GOMJABIG_01169 8.9e-60 divIC D Septum formation initiator
GOMJABIG_01170 5.4e-34 yabO J S4 domain protein
GOMJABIG_01171 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GOMJABIG_01172 8.7e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
GOMJABIG_01173 3.6e-182 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
GOMJABIG_01174 3.5e-123 S (CBS) domain
GOMJABIG_01175 2.2e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GOMJABIG_01176 5.9e-61 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
GOMJABIG_01177 5.1e-265 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
GOMJABIG_01178 1.2e-260 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
GOMJABIG_01179 8e-41 rpmE2 J Ribosomal protein L31
GOMJABIG_01180 3e-298 ybeC E amino acid
GOMJABIG_01181 7.9e-132 XK27_08845 S ABC transporter, ATP-binding protein
GOMJABIG_01182 5.1e-138 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
GOMJABIG_01183 8e-177 ABC-SBP S ABC transporter
GOMJABIG_01184 9.8e-225 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
GOMJABIG_01185 4.7e-279 pipD E Dipeptidase
GOMJABIG_01186 9.4e-115 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
GOMJABIG_01187 1.6e-79 XK27_02070 S Nitroreductase family
GOMJABIG_01188 3.9e-32 hxlR K Transcriptional regulator, HxlR family
GOMJABIG_01189 2e-74
GOMJABIG_01190 1.7e-59 S Putative adhesin
GOMJABIG_01191 2.6e-37
GOMJABIG_01192 4e-95
GOMJABIG_01193 3e-14 ymdC 2.7.1.12, 2.7.1.87, 2.7.1.95 J kanamycin kinase activity
GOMJABIG_01195 6.9e-81 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
GOMJABIG_01196 1.7e-78 K Transcriptional regulator
GOMJABIG_01197 1.2e-177 1.1.1.1 C nadph quinone reductase
GOMJABIG_01198 2.2e-82 XK27_09675 K Acetyltransferase (GNAT) domain
GOMJABIG_01199 2.6e-62 S Protein of unknown function (DUF3021)
GOMJABIG_01200 3.5e-71 K LytTr DNA-binding domain
GOMJABIG_01201 2.4e-137 cylB V ABC-2 type transporter
GOMJABIG_01202 6.4e-143 cylA V ABC transporter
GOMJABIG_01203 2.2e-218 ywhK S Membrane
GOMJABIG_01204 2.4e-50 yjdF S Protein of unknown function (DUF2992)
GOMJABIG_01205 5.3e-256 norB EGP Major Facilitator
GOMJABIG_01206 8.6e-83 K Bacterial regulatory proteins, tetR family
GOMJABIG_01207 2.1e-51 doc S Fic/DOC family
GOMJABIG_01208 7.6e-26
GOMJABIG_01209 1.5e-159 K Helix-turn-helix
GOMJABIG_01210 4.8e-93 yxkA S Phosphatidylethanolamine-binding protein
GOMJABIG_01211 5.6e-107 K transcriptional regulator
GOMJABIG_01212 4.2e-12
GOMJABIG_01213 6.8e-187 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
GOMJABIG_01214 1.1e-56 hxlR K Transcriptional regulator, HxlR family
GOMJABIG_01215 1.5e-302 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
GOMJABIG_01216 8.9e-131 K Psort location CytoplasmicMembrane, score
GOMJABIG_01217 9e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
GOMJABIG_01218 3.5e-236 pbuX F xanthine permease
GOMJABIG_01219 8.5e-240 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GOMJABIG_01220 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
GOMJABIG_01221 2.5e-63 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
GOMJABIG_01222 1.3e-73 S Domain of unknown function (DUF1934)
GOMJABIG_01223 5.1e-267 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
GOMJABIG_01224 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
GOMJABIG_01225 2.4e-153 malG P ABC transporter permease
GOMJABIG_01226 1.9e-253 malF P Binding-protein-dependent transport system inner membrane component
GOMJABIG_01227 7.4e-217 malE G Bacterial extracellular solute-binding protein
GOMJABIG_01228 2.7e-210 msmX P Belongs to the ABC transporter superfamily
GOMJABIG_01229 2.4e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
GOMJABIG_01230 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
GOMJABIG_01231 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
GOMJABIG_01232 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
GOMJABIG_01233 2.5e-175 yvdE K helix_turn _helix lactose operon repressor
GOMJABIG_01234 1.1e-173 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GOMJABIG_01235 4.1e-219 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GOMJABIG_01236 1.5e-152 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
GOMJABIG_01237 2.2e-35 veg S Biofilm formation stimulator VEG
GOMJABIG_01238 1.2e-160 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
GOMJABIG_01239 1.2e-97 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
GOMJABIG_01240 8e-148 tatD L hydrolase, TatD family
GOMJABIG_01241 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GOMJABIG_01242 8.5e-182 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
GOMJABIG_01243 4e-99 S TPM domain
GOMJABIG_01244 5.6e-91 comEB 3.5.4.12 F MafB19-like deaminase
GOMJABIG_01245 1.2e-194 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
GOMJABIG_01246 1.6e-114 E Belongs to the SOS response-associated peptidase family
GOMJABIG_01248 5e-39 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GOMJABIG_01250 7.5e-183 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
GOMJABIG_01251 1.3e-124 manY G PTS system
GOMJABIG_01252 3.3e-172 manN G system, mannose fructose sorbose family IID component
GOMJABIG_01253 1.8e-65 manO S Domain of unknown function (DUF956)
GOMJABIG_01254 1.9e-253 yifK E Amino acid permease
GOMJABIG_01255 1.3e-230 yifK E Amino acid permease
GOMJABIG_01256 1e-136 puuD S peptidase C26
GOMJABIG_01257 3.1e-235 steT_1 E amino acid
GOMJABIG_01258 3.4e-191 asnA 6.3.1.1 F aspartate--ammonia ligase
GOMJABIG_01259 2.3e-162 EG EamA-like transporter family
GOMJABIG_01260 2.4e-256 yfnA E Amino Acid
GOMJABIG_01261 1e-130 cobQ S glutamine amidotransferase
GOMJABIG_01262 5.4e-147 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
GOMJABIG_01263 2.9e-142 ptp2 3.1.3.48 T Tyrosine phosphatase family
GOMJABIG_01264 4.7e-185 scrR K Transcriptional regulator, LacI family
GOMJABIG_01265 6.7e-297 scrB 3.2.1.26 GH32 G invertase
GOMJABIG_01266 0.0 scrA 2.7.1.199, 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
GOMJABIG_01267 1.3e-36
GOMJABIG_01268 1e-197 V ABC-type multidrug transport system, ATPase and permease components
GOMJABIG_01269 5.5e-180 V ABC-type multidrug transport system, ATPase and permease components
GOMJABIG_01270 1.9e-89 ymdB S Macro domain protein
GOMJABIG_01271 7.9e-291 V ABC transporter transmembrane region
GOMJABIG_01272 3.9e-122 puuD S peptidase C26
GOMJABIG_01273 1.2e-155
GOMJABIG_01274 4.3e-71 aroD 1.1.1.25, 4.2.1.10 E 3-dehydroquinate dehydratase activity
GOMJABIG_01275 2.6e-154 2.7.7.12 C Domain of unknown function (DUF4931)
GOMJABIG_01276 6.3e-154 ybbH_2 K Helix-turn-helix domain, rpiR family
GOMJABIG_01277 7.8e-140 3.4.16.4, 3.5.2.6 V Beta-lactamase enzyme family
GOMJABIG_01278 0.0 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
GOMJABIG_01279 4e-248 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GOMJABIG_01280 2.5e-153 O protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GOMJABIG_01281 6.9e-119
GOMJABIG_01282 4.2e-51
GOMJABIG_01283 2e-135 S Belongs to the UPF0246 family
GOMJABIG_01284 6.6e-136 aroD S Alpha/beta hydrolase family
GOMJABIG_01285 2e-112 G Phosphoglycerate mutase family
GOMJABIG_01286 1.5e-106 G phosphoglycerate mutase
GOMJABIG_01287 9.3e-84 ygfC K Bacterial regulatory proteins, tetR family
GOMJABIG_01288 1.4e-179 hrtB V ABC transporter permease
GOMJABIG_01289 3.1e-119 devA 3.6.3.25 V ABC transporter, ATP-binding protein
GOMJABIG_01290 8.7e-156 K CAT RNA binding domain
GOMJABIG_01291 0.0 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
GOMJABIG_01292 4.1e-294 arbB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GOMJABIG_01293 1.8e-270 pipD E Dipeptidase
GOMJABIG_01294 2.3e-37
GOMJABIG_01295 6.7e-105 K WHG domain
GOMJABIG_01296 2.2e-96 nqr 1.5.1.36 S reductase
GOMJABIG_01297 3.7e-99 azr 1.5.1.36 S NADPH-dependent FMN reductase
GOMJABIG_01298 3.7e-201 4.2.1.126 S Bacterial protein of unknown function (DUF871)
GOMJABIG_01299 5.7e-149 3.1.3.48 T Tyrosine phosphatase family
GOMJABIG_01300 2.5e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GOMJABIG_01301 6.4e-96 cvpA S Colicin V production protein
GOMJABIG_01302 9.1e-130 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
GOMJABIG_01303 1.1e-142 noc K Belongs to the ParB family
GOMJABIG_01304 4.4e-138 soj D Sporulation initiation inhibitor
GOMJABIG_01305 6.5e-154 spo0J K Belongs to the ParB family
GOMJABIG_01306 2.9e-43 yyzM S Bacterial protein of unknown function (DUF951)
GOMJABIG_01307 2e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
GOMJABIG_01308 7.8e-149 XK27_01040 S Protein of unknown function (DUF1129)
GOMJABIG_01309 3.2e-298 V ABC transporter, ATP-binding protein
GOMJABIG_01310 0.0 V ABC transporter
GOMJABIG_01311 7.4e-121 K response regulator
GOMJABIG_01312 4.3e-206 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
GOMJABIG_01313 2.2e-306 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GOMJABIG_01314 1.2e-143 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
GOMJABIG_01315 7.8e-163 natA S ABC transporter, ATP-binding protein
GOMJABIG_01316 3e-218 natB CP ABC-2 family transporter protein
GOMJABIG_01317 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
GOMJABIG_01318 1.4e-136 fruR K DeoR C terminal sensor domain
GOMJABIG_01319 1.2e-166 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
GOMJABIG_01320 0.0 fruA 2.7.1.200, 2.7.1.202 GT Phosphotransferase System
GOMJABIG_01321 0.0 2.7.7.7 M domain protein
GOMJABIG_01322 1.2e-198 2.7.7.7 M domain protein
GOMJABIG_01323 1.4e-139 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
GOMJABIG_01324 2.1e-42 K helix_turn_helix, Arsenical Resistance Operon Repressor
GOMJABIG_01325 1.2e-158 psaA P Belongs to the bacterial solute-binding protein 9 family
GOMJABIG_01326 1.6e-117 fhuC P ABC transporter
GOMJABIG_01327 1.6e-132 znuB U ABC 3 transport family
GOMJABIG_01328 1.6e-256 lctP C L-lactate permease
GOMJABIG_01329 0.0 pepF E oligoendopeptidase F
GOMJABIG_01330 1.7e-207 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GOMJABIG_01331 9e-38
GOMJABIG_01332 7.4e-62
GOMJABIG_01333 4e-284 S ABC transporter
GOMJABIG_01334 2.4e-136 thrE S Putative threonine/serine exporter
GOMJABIG_01335 3.7e-79 S Threonine/Serine exporter, ThrE
GOMJABIG_01336 4.4e-39
GOMJABIG_01337 5.2e-59 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
GOMJABIG_01338 1.9e-78
GOMJABIG_01339 7.9e-174 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GOMJABIG_01340 2.7e-79 nrdI F Belongs to the NrdI family
GOMJABIG_01341 1.2e-109
GOMJABIG_01342 5.6e-270 S O-antigen ligase like membrane protein
GOMJABIG_01343 5.3e-44
GOMJABIG_01344 4.9e-99 gmk2 2.7.4.8 F Guanylate kinase
GOMJABIG_01345 6.9e-117 M NlpC P60 family protein
GOMJABIG_01346 2.9e-229 S Putative peptidoglycan binding domain
GOMJABIG_01347 2.1e-230 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GOMJABIG_01348 4.9e-276 E amino acid
GOMJABIG_01349 6.3e-134 cysA V ABC transporter, ATP-binding protein
GOMJABIG_01350 0.0 V FtsX-like permease family
GOMJABIG_01351 2e-123 pgm3 G Phosphoglycerate mutase family
GOMJABIG_01352 2.4e-25
GOMJABIG_01353 1.3e-52
GOMJABIG_01354 1.1e-149 xth 3.1.11.2 L exodeoxyribonuclease III
GOMJABIG_01355 2.8e-28 rpiR1 K Helix-turn-helix domain, rpiR family
GOMJABIG_01356 0.0 3.6.3.8 P ATPase, P-type (transporting), HAD superfamily, subfamily IC
GOMJABIG_01358 2.7e-117 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
GOMJABIG_01359 0.0 helD 3.6.4.12 L DNA helicase
GOMJABIG_01360 8.6e-120 yvpB S Peptidase_C39 like family
GOMJABIG_01361 3.6e-120 K Helix-turn-helix domain, rpiR family
GOMJABIG_01362 4.5e-83 rarA L MgsA AAA+ ATPase C terminal
GOMJABIG_01363 4.9e-238 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GOMJABIG_01364 5.8e-103 E GDSL-like Lipase/Acylhydrolase
GOMJABIG_01365 1.9e-163 coaA 2.7.1.33 F Pantothenic acid kinase
GOMJABIG_01366 7.8e-100 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GOMJABIG_01367 1.4e-18 fhaB M Rib/alpha-like repeat
GOMJABIG_01368 7.5e-22 fruA 2.7.1.200, 2.7.1.202 GT Phosphotransferase System
GOMJABIG_01373 1.4e-49 S PFAM Archaeal ATPase
GOMJABIG_01374 1.2e-138 S PFAM Archaeal ATPase
GOMJABIG_01375 2e-46
GOMJABIG_01376 0.0 uvrA3 L excinuclease ABC, A subunit
GOMJABIG_01378 4e-56 1.14.99.57 S Antibiotic biosynthesis monooxygenase
GOMJABIG_01379 1.4e-89 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
GOMJABIG_01380 1.4e-74 yphH S Cupin domain
GOMJABIG_01381 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
GOMJABIG_01382 2.6e-71 K helix_turn_helix multiple antibiotic resistance protein
GOMJABIG_01383 0.0 lmrA 3.6.3.44 V ABC transporter
GOMJABIG_01384 1.5e-146 C Aldo keto reductase
GOMJABIG_01385 1.1e-19 K Transcriptional regulator
GOMJABIG_01386 2.3e-237 yrvN L AAA C-terminal domain
GOMJABIG_01387 8.7e-170 4.1.1.45 S Amidohydrolase
GOMJABIG_01388 2.8e-32
GOMJABIG_01389 3e-109 ybhL S Belongs to the BI1 family
GOMJABIG_01390 7.3e-166 akr5f 1.1.1.346 S reductase
GOMJABIG_01391 4.6e-106 lacA 2.3.1.79 S Transferase hexapeptide repeat
GOMJABIG_01392 7.5e-115 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
GOMJABIG_01393 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GOMJABIG_01394 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GOMJABIG_01395 8.2e-179 K Transcriptional regulator
GOMJABIG_01396 2.8e-171 ppaC 3.6.1.1 C inorganic pyrophosphatase
GOMJABIG_01397 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
GOMJABIG_01398 1.3e-110 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GOMJABIG_01399 3e-122 yoaK S Protein of unknown function (DUF1275)
GOMJABIG_01400 8.3e-204 xerS L Belongs to the 'phage' integrase family
GOMJABIG_01401 1.4e-153 K Transcriptional regulator
GOMJABIG_01402 4.5e-152
GOMJABIG_01403 2.2e-162 degV S EDD domain protein, DegV family
GOMJABIG_01404 6e-62
GOMJABIG_01405 0.0 FbpA K Fibronectin-binding protein
GOMJABIG_01406 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
GOMJABIG_01407 2.6e-194 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
GOMJABIG_01408 5.1e-170 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GOMJABIG_01409 3.7e-76 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GOMJABIG_01410 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
GOMJABIG_01411 1.7e-54
GOMJABIG_01412 1.7e-173 degV S DegV family
GOMJABIG_01413 1.5e-219 I transferase activity, transferring acyl groups other than amino-acyl groups
GOMJABIG_01414 6.1e-243 cpdA S Calcineurin-like phosphoesterase
GOMJABIG_01415 1.7e-215 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
GOMJABIG_01416 4.5e-71 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
GOMJABIG_01417 3e-104 ypsA S Belongs to the UPF0398 family
GOMJABIG_01418 3.9e-113 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
GOMJABIG_01419 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
GOMJABIG_01420 9.4e-115 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GOMJABIG_01421 1.8e-113 dnaD L DnaD domain protein
GOMJABIG_01422 6.4e-259 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
GOMJABIG_01423 7e-89 ypmB S Protein conserved in bacteria
GOMJABIG_01424 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
GOMJABIG_01425 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
GOMJABIG_01426 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
GOMJABIG_01427 2e-169 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
GOMJABIG_01428 5.1e-176 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
GOMJABIG_01429 2.7e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
GOMJABIG_01430 1.3e-182 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
GOMJABIG_01431 1.4e-279 V ABC-type multidrug transport system, ATPase and permease components
GOMJABIG_01432 1.7e-290 V ABC-type multidrug transport system, ATPase and permease components
GOMJABIG_01433 4.7e-211 G Transmembrane secretion effector
GOMJABIG_01434 3.4e-157 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
GOMJABIG_01435 4.7e-160 rbsU U ribose uptake protein RbsU
GOMJABIG_01436 3.9e-66 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
GOMJABIG_01437 3.5e-157 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GOMJABIG_01438 4.7e-76 6.3.3.2 S ASCH
GOMJABIG_01439 8.9e-147 2.4.2.3 F Phosphorylase superfamily
GOMJABIG_01440 1e-115 2.4.2.3 F Phosphorylase superfamily
GOMJABIG_01441 7.8e-82 3.6.1.55 F NUDIX domain
GOMJABIG_01442 1.6e-07 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
GOMJABIG_01443 6.5e-165 yxaM EGP Major facilitator Superfamily
GOMJABIG_01444 3.7e-108 XK27_07525 3.6.1.55 F NUDIX domain
GOMJABIG_01445 8.6e-87 2.3.1.57 K Acetyltransferase (GNAT) family
GOMJABIG_01446 6.4e-93 rimL J Acetyltransferase (GNAT) domain
GOMJABIG_01447 9.7e-112 aroD S Serine hydrolase (FSH1)
GOMJABIG_01449 5.3e-245 I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOMJABIG_01450 5e-42
GOMJABIG_01451 9.1e-123 3.1.3.48 T Tyrosine phosphatase family
GOMJABIG_01452 2.2e-60
GOMJABIG_01453 9.8e-46 S MazG-like family
GOMJABIG_01454 8.2e-84 FG HIT domain
GOMJABIG_01455 6.2e-76 K Acetyltransferase (GNAT) domain
GOMJABIG_01456 9.9e-77
GOMJABIG_01457 7e-67
GOMJABIG_01458 6.7e-109 speG J Acetyltransferase (GNAT) domain
GOMJABIG_01459 9.4e-43
GOMJABIG_01460 1.2e-51 S endonuclease activity
GOMJABIG_01461 3.8e-54
GOMJABIG_01462 8.6e-282 V ABC transporter transmembrane region
GOMJABIG_01463 4.1e-78 C nitroreductase
GOMJABIG_01464 2.6e-31 nss M transferase activity, transferring glycosyl groups
GOMJABIG_01465 7e-24 2.7.7.7 M domain protein
GOMJABIG_01466 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
GOMJABIG_01467 3.8e-228 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GOMJABIG_01468 4.9e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
GOMJABIG_01469 3.6e-287 pipD E Dipeptidase
GOMJABIG_01470 1.3e-166 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
GOMJABIG_01471 0.0 smc D Required for chromosome condensation and partitioning
GOMJABIG_01472 2e-123 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
GOMJABIG_01473 0.0 oppA E ABC transporter substrate-binding protein
GOMJABIG_01474 0.0 oppA E ABC transporter substrate-binding protein
GOMJABIG_01475 2e-161 oppC P Binding-protein-dependent transport system inner membrane component
GOMJABIG_01476 1.6e-177 oppB P ABC transporter permease
GOMJABIG_01477 4.6e-177 oppF P Belongs to the ABC transporter superfamily
GOMJABIG_01478 3.1e-192 oppD P Belongs to the ABC transporter superfamily
GOMJABIG_01479 4.4e-36 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
GOMJABIG_01480 1.9e-181 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
GOMJABIG_01481 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
GOMJABIG_01482 1.6e-307 yloV S DAK2 domain fusion protein YloV
GOMJABIG_01483 1.4e-57 asp S Asp23 family, cell envelope-related function
GOMJABIG_01484 1.2e-25 rpmB J Belongs to the bacterial ribosomal protein bL28 family
GOMJABIG_01485 3.4e-123 thiN 2.7.6.2 H thiamine pyrophosphokinase
GOMJABIG_01486 2e-120 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
GOMJABIG_01487 4.5e-163 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
GOMJABIG_01488 0.0 KLT serine threonine protein kinase
GOMJABIG_01489 2.7e-140 stp 3.1.3.16 T phosphatase
GOMJABIG_01490 8.5e-243 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
GOMJABIG_01491 9.3e-175 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GOMJABIG_01492 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GOMJABIG_01493 2.3e-31 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
GOMJABIG_01494 7.3e-112 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
GOMJABIG_01495 3e-47
GOMJABIG_01496 7.2e-295 recN L May be involved in recombinational repair of damaged DNA
GOMJABIG_01497 1.1e-155 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
GOMJABIG_01498 3.2e-161 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GOMJABIG_01499 1.1e-34 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GOMJABIG_01500 1.2e-250 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GOMJABIG_01501 4.2e-150 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GOMJABIG_01502 3e-66 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GOMJABIG_01503 8.2e-73 yqhY S Asp23 family, cell envelope-related function
GOMJABIG_01504 1.1e-101 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GOMJABIG_01505 5e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
GOMJABIG_01506 2.8e-48 rpmA J Belongs to the bacterial ribosomal protein bL27 family
GOMJABIG_01507 2e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
GOMJABIG_01508 6.9e-62 arsC 1.20.4.1 P Belongs to the ArsC family
GOMJABIG_01509 1.1e-150 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GOMJABIG_01510 4e-216 S Uncharacterized protein conserved in bacteria (DUF2325)
GOMJABIG_01511 1.8e-11
GOMJABIG_01512 7.1e-47
GOMJABIG_01513 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
GOMJABIG_01514 2.9e-91 S ECF-type riboflavin transporter, S component
GOMJABIG_01515 2.6e-144 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
GOMJABIG_01516 3.5e-82
GOMJABIG_01517 2.8e-122 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
GOMJABIG_01518 2.5e-309 S Predicted membrane protein (DUF2207)
GOMJABIG_01519 1.9e-170 I Carboxylesterase family
GOMJABIG_01520 2.6e-99 M domain protein
GOMJABIG_01521 5.3e-253 pepC 3.4.22.40 E Peptidase C1-like family
GOMJABIG_01522 1.6e-61 pdxH S Pyridoxamine 5'-phosphate oxidase
GOMJABIG_01523 0.0 oppA E ABC transporter substrate-binding protein
GOMJABIG_01524 1.9e-77 K MerR HTH family regulatory protein
GOMJABIG_01525 6.8e-265 lmrB EGP Major facilitator Superfamily
GOMJABIG_01526 2.4e-93 S Domain of unknown function (DUF4811)
GOMJABIG_01527 7.3e-141 ppm1 GT2 M Glycosyl transferase family 2
GOMJABIG_01528 5.3e-107 fic D Fic/DOC family
GOMJABIG_01529 5.2e-69
GOMJABIG_01530 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
GOMJABIG_01532 7.2e-141 S haloacid dehalogenase-like hydrolase
GOMJABIG_01533 0.0 pepN 3.4.11.2 E aminopeptidase
GOMJABIG_01534 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
GOMJABIG_01535 3.4e-47 K Helix-turn-helix XRE-family like proteins
GOMJABIG_01536 3.1e-32 K Helix-turn-helix XRE-family like proteins
GOMJABIG_01538 3.7e-142 S Bacterial membrane protein, YfhO
GOMJABIG_01539 1.7e-166 S Bacterial membrane protein, YfhO
GOMJABIG_01541 3e-46
GOMJABIG_01542 6.1e-78 S zinc-ribbon domain
GOMJABIG_01543 2.5e-45
GOMJABIG_01544 8.8e-40 K Helix-turn-helix XRE-family like proteins
GOMJABIG_01545 8.6e-95 S response to antibiotic
GOMJABIG_01546 2.2e-28 S zinc-ribbon domain
GOMJABIG_01548 9.2e-226 sptS 2.7.13.3 T Histidine kinase
GOMJABIG_01549 5.4e-113 K response regulator
GOMJABIG_01550 1e-113 2.7.6.5 T Region found in RelA / SpoT proteins
GOMJABIG_01551 1e-116 ltrA S Bacterial low temperature requirement A protein (LtrA)
GOMJABIG_01552 2.6e-19 ltrA S Bacterial low temperature requirement A protein (LtrA)
GOMJABIG_01553 2.5e-68 O OsmC-like protein
GOMJABIG_01554 1.6e-285 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
GOMJABIG_01555 2.2e-179 E ABC transporter, ATP-binding protein
GOMJABIG_01556 4.3e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
GOMJABIG_01557 1e-162 yihY S Belongs to the UPF0761 family
GOMJABIG_01558 1.9e-160 map 3.4.11.18 E Methionine Aminopeptidase
GOMJABIG_01559 2.5e-77 fld C Flavodoxin
GOMJABIG_01560 9.4e-89 gtcA S Teichoic acid glycosylation protein
GOMJABIG_01561 5.5e-214 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
GOMJABIG_01564 1.6e-249 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GOMJABIG_01565 1.7e-205 yfmL 3.6.4.13 L DEAD DEAH box helicase
GOMJABIG_01566 2.4e-135 M Glycosyl hydrolases family 25
GOMJABIG_01567 1.1e-226 potE E amino acid
GOMJABIG_01568 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
GOMJABIG_01569 3.3e-237 yhdP S Transporter associated domain
GOMJABIG_01570 5.7e-129
GOMJABIG_01571 6.8e-116 C nitroreductase
GOMJABIG_01572 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
GOMJABIG_01573 8.1e-257 L transposase, IS605 OrfB family
GOMJABIG_01574 7e-83 tlpA2 L Transposase IS200 like
GOMJABIG_01575 2.7e-35 glcR K DeoR C terminal sensor domain
GOMJABIG_01576 8.9e-133 gntR K UbiC transcription regulator-associated domain protein
GOMJABIG_01577 8.2e-176 rihB 3.2.2.1 F Nucleoside
GOMJABIG_01578 1.4e-127 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GOMJABIG_01579 2.7e-158 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GOMJABIG_01580 2.6e-85 dps P Belongs to the Dps family
GOMJABIG_01581 1.6e-280 S C4-dicarboxylate anaerobic carrier
GOMJABIG_01588 3.8e-246 steT E amino acid
GOMJABIG_01590 3.2e-217 S Sterol carrier protein domain
GOMJABIG_01591 5.2e-164 arbZ I Acyltransferase
GOMJABIG_01592 3.3e-115 ywnB S NAD(P)H-binding
GOMJABIG_01593 2.4e-127 S Protein of unknown function (DUF975)
GOMJABIG_01594 9.9e-137 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GOMJABIG_01595 4.4e-152 yitS S EDD domain protein, DegV family
GOMJABIG_01596 3.5e-17
GOMJABIG_01597 2.1e-288 V ABC-type multidrug transport system, ATPase and permease components
GOMJABIG_01598 1.5e-141 ropB K Helix-turn-helix domain
GOMJABIG_01599 0.0 tetP J elongation factor G
GOMJABIG_01600 8.9e-240 clcA P chloride
GOMJABIG_01602 3.9e-15
GOMJABIG_01605 4.1e-100 ropB K Transcriptional regulator
GOMJABIG_01606 9.6e-183 XK27_02480 EGP Major facilitator Superfamily
GOMJABIG_01607 3.5e-09 S YcaO cyclodehydratase, ATP-ad Mg2+-binding
GOMJABIG_01608 1.4e-17
GOMJABIG_01610 4.2e-40 S Transglycosylase associated protein
GOMJABIG_01611 9.7e-160 xth 3.1.11.2 L exodeoxyribonuclease III
GOMJABIG_01612 0.0 L Helicase C-terminal domain protein
GOMJABIG_01613 1.5e-137 S Alpha beta hydrolase
GOMJABIG_01614 8.9e-16 ropB K Transcriptional regulator
GOMJABIG_01615 6.7e-156 ropB K Transcriptional regulator
GOMJABIG_01616 1.3e-208 EGP Major facilitator Superfamily
GOMJABIG_01617 1.7e-27
GOMJABIG_01618 5.3e-171 K AI-2E family transporter
GOMJABIG_01620 6.2e-241 gor 1.8.1.7 C pyridine nucleotide-disulfide oxidoreductase
GOMJABIG_01621 2.6e-211 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GOMJABIG_01622 1.6e-97 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
GOMJABIG_01623 2e-191 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GOMJABIG_01624 0.0 S domain, Protein
GOMJABIG_01625 2.2e-260 E amino acid
GOMJABIG_01626 1.3e-168 K LysR substrate binding domain
GOMJABIG_01627 0.0 1.3.5.4 C FAD binding domain
GOMJABIG_01628 1.4e-243 brnQ U Component of the transport system for branched-chain amino acids
GOMJABIG_01629 3.1e-133 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
GOMJABIG_01630 3.7e-176 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
GOMJABIG_01631 4.7e-63 S Peptidase propeptide and YPEB domain
GOMJABIG_01632 3.7e-187 cbh 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
GOMJABIG_01633 5.3e-248 yhjX_2 P Major Facilitator Superfamily
GOMJABIG_01634 9.4e-253 yhjX_2 P Major Facilitator Superfamily
GOMJABIG_01635 0.0 2.7.7.7, 3.4.21.110 D Leucine-rich repeat (LRR) protein
GOMJABIG_01636 2e-163 arbZ I Phosphate acyltransferases
GOMJABIG_01637 5e-184 arbY M Glycosyl transferase family 8
GOMJABIG_01638 3.8e-184 arbY M Glycosyl transferase family 8
GOMJABIG_01639 2.4e-150 arbx M Glycosyl transferase family 8
GOMJABIG_01640 1.5e-146 arbV 2.3.1.51 I Acyl-transferase
GOMJABIG_01643 4e-130 K response regulator
GOMJABIG_01644 0.0 vicK 2.7.13.3 T Histidine kinase
GOMJABIG_01645 1.2e-241 yycH S YycH protein
GOMJABIG_01646 1.1e-147 yycI S YycH protein
GOMJABIG_01647 3.7e-148 vicX 3.1.26.11 S domain protein
GOMJABIG_01648 2.2e-176 htrA 3.4.21.107 O serine protease
GOMJABIG_01649 4.4e-80 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GOMJABIG_01650 9.5e-110 P Cobalt transport protein
GOMJABIG_01651 3.7e-233 cbiO1 S ABC transporter, ATP-binding protein
GOMJABIG_01652 7.9e-97 S ABC-type cobalt transport system, permease component
GOMJABIG_01653 2.8e-168 K helix_turn_helix, arabinose operon control protein
GOMJABIG_01655 4.8e-43 S CAAX protease self-immunity
GOMJABIG_01656 5e-162 htpX O Belongs to the peptidase M48B family
GOMJABIG_01657 3.2e-90 lemA S LemA family
GOMJABIG_01658 6e-181 ybiR P Citrate transporter
GOMJABIG_01659 1.7e-64 S Iron-sulphur cluster biosynthesis
GOMJABIG_01660 1.7e-16
GOMJABIG_01661 3.9e-119
GOMJABIG_01663 6.7e-240 ydaM M Glycosyl transferase
GOMJABIG_01664 6.5e-199 G Glycosyl hydrolases family 8
GOMJABIG_01665 4.5e-120 yfbR S HD containing hydrolase-like enzyme
GOMJABIG_01666 7e-175 L HNH nucleases
GOMJABIG_01667 2e-45
GOMJABIG_01668 2.5e-138 glnQ E ABC transporter, ATP-binding protein
GOMJABIG_01669 5.6e-297 glnP P ABC transporter permease
GOMJABIG_01670 1.9e-115 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
GOMJABIG_01671 4.4e-64 yeaO S Protein of unknown function, DUF488
GOMJABIG_01672 3.6e-124 terC P Integral membrane protein TerC family
GOMJABIG_01673 2.4e-87 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
GOMJABIG_01674 4.2e-135 cobB K SIR2 family
GOMJABIG_01675 2.6e-80
GOMJABIG_01676 4.8e-287 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOMJABIG_01677 2.1e-123 yugP S Putative neutral zinc metallopeptidase
GOMJABIG_01678 7.7e-174 S Alpha/beta hydrolase of unknown function (DUF915)
GOMJABIG_01679 2.2e-139 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GOMJABIG_01681 4.5e-148 ypuA S Protein of unknown function (DUF1002)
GOMJABIG_01682 8e-154 epsV 2.7.8.12 S glycosyl transferase family 2
GOMJABIG_01683 1.1e-124 S Alpha/beta hydrolase family
GOMJABIG_01684 7e-62
GOMJABIG_01685 4.5e-180 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GOMJABIG_01686 1.8e-240 cycA E Amino acid permease
GOMJABIG_01687 7.6e-115 luxT K Bacterial regulatory proteins, tetR family
GOMJABIG_01688 4.6e-125
GOMJABIG_01689 9.2e-265 S Cysteine-rich secretory protein family
GOMJABIG_01690 1.8e-206 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
GOMJABIG_01691 5.2e-77
GOMJABIG_01694 3.4e-86 comEA L Competence protein ComEA
GOMJABIG_01695 1.3e-185 ylbL T Belongs to the peptidase S16 family
GOMJABIG_01696 9.6e-86 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GOMJABIG_01697 1.9e-95 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
GOMJABIG_01698 7.4e-50 ylbG S UPF0298 protein
GOMJABIG_01699 7.7e-211 ftsW D Belongs to the SEDS family
GOMJABIG_01700 0.0 typA T GTP-binding protein TypA
GOMJABIG_01701 5.2e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GOMJABIG_01702 2.3e-34 ykzG S Belongs to the UPF0356 family
GOMJABIG_01703 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GOMJABIG_01704 2.1e-174 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
GOMJABIG_01705 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
GOMJABIG_01706 4.3e-115 S Repeat protein
GOMJABIG_01707 1.2e-123 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
GOMJABIG_01708 8.7e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
GOMJABIG_01709 9.6e-58 XK27_04120 S Putative amino acid metabolism
GOMJABIG_01710 1e-215 iscS 2.8.1.7 E Aminotransferase class V
GOMJABIG_01711 1.1e-127 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GOMJABIG_01712 4.9e-34
GOMJABIG_01713 1.7e-102 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
GOMJABIG_01714 2.3e-33 cspA K 'Cold-shock' DNA-binding domain
GOMJABIG_01715 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GOMJABIG_01716 8.2e-116 gpsB D DivIVA domain protein
GOMJABIG_01717 2.4e-147 ylmH S S4 domain protein
GOMJABIG_01718 1.6e-27 yggT S YGGT family
GOMJABIG_01719 1.3e-62 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
GOMJABIG_01720 1.1e-243 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GOMJABIG_01721 6e-239 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
GOMJABIG_01722 4e-153 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
GOMJABIG_01723 1.8e-209 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GOMJABIG_01724 1.1e-259 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GOMJABIG_01725 2e-177 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GOMJABIG_01726 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
GOMJABIG_01727 4.8e-55 ftsL D Cell division protein FtsL
GOMJABIG_01728 1.1e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
GOMJABIG_01729 4.1e-77 mraZ K Belongs to the MraZ family
GOMJABIG_01730 2.7e-52 S Protein of unknown function (DUF3397)
GOMJABIG_01731 3.6e-13 S Protein of unknown function (DUF4044)
GOMJABIG_01732 1.6e-94 mreD
GOMJABIG_01733 1.4e-140 mreC M Involved in formation and maintenance of cell shape
GOMJABIG_01734 2.7e-164 mreB D cell shape determining protein MreB
GOMJABIG_01735 2.1e-111 radC L DNA repair protein
GOMJABIG_01736 2e-123 S Haloacid dehalogenase-like hydrolase
GOMJABIG_01737 2.4e-234 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
GOMJABIG_01738 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
GOMJABIG_01739 0.0 3.6.3.8 P P-type ATPase
GOMJABIG_01740 2.3e-177 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
GOMJABIG_01741 2.5e-124 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GOMJABIG_01742 1.1e-228 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GOMJABIG_01743 4.6e-216 iscS2 2.8.1.7 E Aminotransferase class V
GOMJABIG_01744 5.5e-290 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
GOMJABIG_01746 1e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GOMJABIG_01747 2.4e-83 yueI S Protein of unknown function (DUF1694)
GOMJABIG_01748 5.6e-239 rarA L recombination factor protein RarA
GOMJABIG_01750 5.2e-81 usp6 T universal stress protein
GOMJABIG_01751 1.8e-223 rodA D Belongs to the SEDS family
GOMJABIG_01752 6.6e-34 S Protein of unknown function (DUF2969)
GOMJABIG_01753 2.6e-51 yidD S Could be involved in insertion of integral membrane proteins into the membrane
GOMJABIG_01754 6.8e-13 S DNA-directed RNA polymerase subunit beta
GOMJABIG_01755 1.7e-179 mbl D Cell shape determining protein MreB Mrl
GOMJABIG_01756 2.4e-31 ywzB S Protein of unknown function (DUF1146)
GOMJABIG_01757 4.1e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
GOMJABIG_01758 9.6e-248 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GOMJABIG_01759 5.4e-170 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GOMJABIG_01760 6.7e-284 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GOMJABIG_01761 9.8e-92 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GOMJABIG_01762 3.1e-52 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GOMJABIG_01763 4.7e-26 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GOMJABIG_01764 5e-128 atpB C it plays a direct role in the translocation of protons across the membrane
GOMJABIG_01765 1.5e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GOMJABIG_01766 7.7e-188 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
GOMJABIG_01767 7.1e-158 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
GOMJABIG_01768 1e-196 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GOMJABIG_01769 5.5e-112 tdk 2.7.1.21 F thymidine kinase
GOMJABIG_01770 4.9e-262 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain
GOMJABIG_01771 3.3e-194 ampC V Beta-lactamase
GOMJABIG_01772 6.1e-107 sip L Belongs to the 'phage' integrase family
GOMJABIG_01773 5.2e-44 K sequence-specific DNA binding
GOMJABIG_01774 2.3e-23
GOMJABIG_01776 4.6e-29
GOMJABIG_01777 1.3e-104 S D5 N terminal like
GOMJABIG_01781 5.7e-14
GOMJABIG_01784 3.2e-69
GOMJABIG_01785 2.5e-117 EGP Major facilitator Superfamily
GOMJABIG_01786 4.5e-98 EGP Major facilitator Superfamily
GOMJABIG_01787 1.9e-261 pgi 5.3.1.9 G Belongs to the GPI family
GOMJABIG_01788 5.9e-106 vanZ V VanZ like family
GOMJABIG_01789 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GOMJABIG_01790 5.1e-170 scrK 2.7.1.2, 2.7.1.4 GK ROK family
GOMJABIG_01791 1.6e-244 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
GOMJABIG_01792 8.2e-76 rplI J Binds to the 23S rRNA
GOMJABIG_01793 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
GOMJABIG_01794 3.5e-158 corA P CorA-like Mg2+ transporter protein
GOMJABIG_01795 2.1e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GOMJABIG_01796 4.3e-81 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
GOMJABIG_01797 9.4e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
GOMJABIG_01798 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GOMJABIG_01799 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GOMJABIG_01800 3.8e-207 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GOMJABIG_01801 1.6e-20 yaaA S S4 domain
GOMJABIG_01802 7.9e-205 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
GOMJABIG_01803 5.2e-260 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GOMJABIG_01804 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
GOMJABIG_01805 3.5e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
GOMJABIG_01806 1.6e-149 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GOMJABIG_01807 1.9e-251 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
GOMJABIG_01808 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
GOMJABIG_01809 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
GOMJABIG_01810 6e-271 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GOMJABIG_01811 2.1e-288 clcA P chloride
GOMJABIG_01812 1.5e-124 mleP S Sodium Bile acid symporter family
GOMJABIG_01813 5e-98 mleR K LysR family
GOMJABIG_01814 2.4e-242 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
GOMJABIG_01815 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
GOMJABIG_01816 6.6e-69 S Iron-sulphur cluster biosynthesis
GOMJABIG_01817 1e-243 EGP Sugar (and other) transporter
GOMJABIG_01818 2.1e-70 K Acetyltransferase (GNAT) domain
GOMJABIG_01819 4.2e-247 ynbB 4.4.1.1 P aluminum resistance
GOMJABIG_01820 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
GOMJABIG_01821 7.5e-280 E Amino acid permease
GOMJABIG_01822 0.0 copA 3.6.3.54 P P-type ATPase
GOMJABIG_01823 2.2e-50 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
GOMJABIG_01824 1.6e-64 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
GOMJABIG_01825 1.1e-74 atkY K Penicillinase repressor
GOMJABIG_01826 7.6e-92
GOMJABIG_01827 4.7e-86
GOMJABIG_01828 3.9e-69 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
GOMJABIG_01829 3.9e-76 K Bacteriophage CI repressor helix-turn-helix domain
GOMJABIG_01830 1.1e-226 pbuG S permease
GOMJABIG_01831 9.7e-231 pbuG S permease
GOMJABIG_01832 5.7e-108 K helix_turn_helix, mercury resistance
GOMJABIG_01833 3e-232 pbuG S permease
GOMJABIG_01834 8e-235 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
GOMJABIG_01835 6.3e-125 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
GOMJABIG_01836 1e-119 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
GOMJABIG_01837 3e-133 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GOMJABIG_01838 4.1e-158 yeaE S Aldo/keto reductase family
GOMJABIG_01839 5.5e-82 lacC 2.7.1.11, 2.7.1.144, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
GOMJABIG_01840 4.1e-56 K DeoR C terminal sensor domain
GOMJABIG_01841 3.5e-50 pts36A 2.7.1.200, 2.7.1.202 G phosphoenolpyruvate-dependent sugar phosphotransferase system
GOMJABIG_01842 8.7e-08 sgcB 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
GOMJABIG_01843 3.3e-165 pts36C G iic component
GOMJABIG_01845 1e-107 4.1.2.17 G Class II Aldolase and Adducin N-terminal domain
GOMJABIG_01846 9.2e-125 S membrane transporter protein
GOMJABIG_01847 0.0 sacX 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
GOMJABIG_01848 3.8e-133 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
GOMJABIG_01849 1.5e-168 yleB 4.2.1.126 S Bacterial protein of unknown function (DUF871)
GOMJABIG_01850 2.3e-148 K Helix-turn-helix domain, rpiR family
GOMJABIG_01851 1.7e-196 tcsA S ABC transporter substrate-binding protein PnrA-like
GOMJABIG_01852 3.9e-157 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
GOMJABIG_01853 4.8e-176 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
GOMJABIG_01854 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
GOMJABIG_01855 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
GOMJABIG_01856 1.3e-182 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
GOMJABIG_01857 1.1e-269 cydA 1.10.3.14 C ubiquinol oxidase
GOMJABIG_01858 0.0 macB_3 V ABC transporter, ATP-binding protein
GOMJABIG_01859 1.1e-198 S DUF218 domain
GOMJABIG_01860 8e-101 S CAAX protease self-immunity
GOMJABIG_01861 2.6e-94 S Protein of unknown function (DUF1440)
GOMJABIG_01862 1.5e-264 G PTS system Galactitol-specific IIC component
GOMJABIG_01863 1.9e-15
GOMJABIG_01864 7.8e-10
GOMJABIG_01865 6.7e-76 S Protein of unknown function (DUF805)
GOMJABIG_01866 2.5e-113 S Protein of unknown function (DUF969)
GOMJABIG_01867 2.9e-157 S Protein of unknown function (DUF979)
GOMJABIG_01868 2.9e-119 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GOMJABIG_01869 4.6e-35
GOMJABIG_01870 2.8e-157 mutR K Helix-turn-helix XRE-family like proteins
GOMJABIG_01871 6.7e-279 V ABC transporter transmembrane region
GOMJABIG_01872 5.4e-89 S Putative adhesin
GOMJABIG_01873 1.9e-201 napA P Sodium/hydrogen exchanger family
GOMJABIG_01874 0.0 cadA P P-type ATPase
GOMJABIG_01875 6.1e-85 ykuL S (CBS) domain
GOMJABIG_01876 2.1e-45
GOMJABIG_01877 1.1e-49
GOMJABIG_01878 5.7e-59
GOMJABIG_01880 4.1e-201 ywhK S Membrane
GOMJABIG_01881 3.9e-39
GOMJABIG_01883 4.3e-291 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GOMJABIG_01884 6.1e-235 dltB M MBOAT, membrane-bound O-acyltransferase family
GOMJABIG_01885 6.7e-37 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GOMJABIG_01886 4.9e-251 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
GOMJABIG_01887 5.5e-144 pbpX2 V Beta-lactamase
GOMJABIG_01888 3.6e-216 lmrP E Major Facilitator Superfamily
GOMJABIG_01889 5.4e-39
GOMJABIG_01890 1e-235 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GOMJABIG_01891 3.7e-168 S Alpha/beta hydrolase of unknown function (DUF915)
GOMJABIG_01892 0.0 clpE2 O AAA domain (Cdc48 subfamily)
GOMJABIG_01893 1.1e-251 yfnA E Amino Acid

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)