ORF_ID e_value Gene_name EC_number CAZy COGs Description
ABFBJKDB_00001 3.6e-116 S Glycosyl transferase family 2
ABFBJKDB_00002 7.4e-64 D peptidase
ABFBJKDB_00003 0.0 asnB 6.3.5.4 E Asparagine synthase
ABFBJKDB_00004 3.7e-37 yiiE S Protein of unknown function (DUF1211)
ABFBJKDB_00005 3.3e-12 yiiE S Protein of unknown function (DUF1211)
ABFBJKDB_00006 1.6e-40 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
ABFBJKDB_00007 7.4e-248 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
ABFBJKDB_00008 3.6e-17 yneR
ABFBJKDB_00009 1.5e-230 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABFBJKDB_00010 2.2e-224 yxbA 6.3.1.12 S ATP-grasp enzyme
ABFBJKDB_00011 3.1e-106 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
ABFBJKDB_00012 3.8e-152 mdtG EGP Major facilitator Superfamily
ABFBJKDB_00013 3.8e-14 yobS K transcriptional regulator
ABFBJKDB_00014 2.8e-109 glcU U sugar transport
ABFBJKDB_00015 4.4e-170 yjjP S Putative threonine/serine exporter
ABFBJKDB_00016 2.4e-69 2.3.1.178 J Acetyltransferase (GNAT) domain
ABFBJKDB_00017 2.2e-96 yicL EG EamA-like transporter family
ABFBJKDB_00018 1.8e-222 pepF E Oligopeptidase F
ABFBJKDB_00019 1.5e-108 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
ABFBJKDB_00020 4.4e-179 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
ABFBJKDB_00021 1.1e-139 gldA 1.1.1.6 C Iron-containing alcohol dehydrogenase
ABFBJKDB_00022 8.4e-62 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
ABFBJKDB_00023 4e-23 relB L RelB antitoxin
ABFBJKDB_00025 8.3e-172 S Putative peptidoglycan binding domain
ABFBJKDB_00026 1.2e-31 K Transcriptional regulator, MarR family
ABFBJKDB_00027 2e-215 XK27_09600 V ABC transporter, ATP-binding protein
ABFBJKDB_00028 1.1e-229 V ABC transporter transmembrane region
ABFBJKDB_00030 4.3e-96 S Domain of unknown function DUF87
ABFBJKDB_00032 3.9e-105 yxeH S hydrolase
ABFBJKDB_00033 1.8e-120 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
ABFBJKDB_00034 9e-114 K response regulator
ABFBJKDB_00035 2.5e-272 vicK 2.7.13.3 T Histidine kinase
ABFBJKDB_00036 1.3e-102 yycH S YycH protein
ABFBJKDB_00037 8.1e-79 yycI S YycH protein
ABFBJKDB_00038 6.8e-30 yyaQ S YjbR
ABFBJKDB_00039 1.7e-116 vicX 3.1.26.11 S domain protein
ABFBJKDB_00040 3.7e-145 htrA 3.4.21.107 O serine protease
ABFBJKDB_00041 9.8e-72 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
ABFBJKDB_00042 4.7e-207 G glycerol-3-phosphate transporter
ABFBJKDB_00043 3.3e-134 S interspecies interaction between organisms
ABFBJKDB_00044 6.6e-64 secY2 U Part of the accessory SecA2 SecY2 system specifically required for export of
ABFBJKDB_00045 1.2e-89 asp1 S Accessory Sec system protein Asp1
ABFBJKDB_00047 1e-97 asp2 3.4.11.5 S Accessory Sec system protein Asp2
ABFBJKDB_00048 1e-32 asp3 S Accessory Sec system protein Asp3
ABFBJKDB_00049 3e-246 secA2 U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
ABFBJKDB_00052 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
ABFBJKDB_00053 7e-31 P Heavy-metal-associated domain
ABFBJKDB_00054 3e-125 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
ABFBJKDB_00055 3.5e-84 dps P Ferritin-like domain
ABFBJKDB_00056 1.1e-14 tnp L Transposase IS66 family
ABFBJKDB_00057 2.9e-51 1.14.12.17 C Oxidoreductase NAD-binding domain
ABFBJKDB_00058 9e-102 qmcA O prohibitin homologues
ABFBJKDB_00059 2.1e-26 S protein encoded in hypervariable junctions of pilus gene clusters
ABFBJKDB_00060 0.0 O Belongs to the peptidase S8 family
ABFBJKDB_00061 1.7e-36 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
ABFBJKDB_00063 4.2e-45 yjaB_1 K Acetyltransferase (GNAT) domain
ABFBJKDB_00064 9.8e-83 yitS S EDD domain protein, DegV family
ABFBJKDB_00065 7.3e-57 racA K Domain of unknown function (DUF1836)
ABFBJKDB_00066 1.4e-115 queH 1.17.99.6, 3.1.26.4 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ABFBJKDB_00067 3.5e-84 potE2 E amino acid
ABFBJKDB_00070 1.5e-24
ABFBJKDB_00071 1e-15
ABFBJKDB_00072 8.7e-93 pstS P T5orf172
ABFBJKDB_00073 1.1e-257 yeeB L DEAD-like helicases superfamily
ABFBJKDB_00074 1.3e-212 yeeA V Type II restriction enzyme, methylase subunits
ABFBJKDB_00075 1.8e-14 yeeA V Type II restriction enzyme, methylase subunits
ABFBJKDB_00076 6.9e-60 yeeA V Type II restriction enzyme, methylase subunits
ABFBJKDB_00077 3.2e-67
ABFBJKDB_00078 4.8e-61
ABFBJKDB_00079 9.6e-166 L T/G mismatch-specific endonuclease activity
ABFBJKDB_00081 8.9e-57 hsdM 2.1.1.72 V HsdM N-terminal domain
ABFBJKDB_00082 4.9e-22 3.1.21.3 V Type I restriction modification DNA specificity domain
ABFBJKDB_00083 5.3e-106 L Belongs to the 'phage' integrase family
ABFBJKDB_00085 1.5e-191 XK27_11280 S Psort location CytoplasmicMembrane, score
ABFBJKDB_00087 9.3e-28 higA K Helix-turn-helix XRE-family like proteins
ABFBJKDB_00088 1.4e-28 S RelE-like toxin of type II toxin-antitoxin system HigB
ABFBJKDB_00089 9.6e-15 rhaD 4.1.2.17, 4.1.2.19 H Catalyzes the reversible cleavage of L-rhamnulose-1- phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde
ABFBJKDB_00090 2.3e-56 S COG NOG19168 non supervised orthologous group
ABFBJKDB_00092 1.3e-126 gntT EG Gluconate
ABFBJKDB_00093 6.8e-153 S Protein conserved in bacteria
ABFBJKDB_00094 1.8e-111 garR 1.1.1.60 I NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
ABFBJKDB_00095 2.6e-56 K helix_turn_helix gluconate operon transcriptional repressor
ABFBJKDB_00096 4.1e-46 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ABFBJKDB_00097 9.1e-31 L Helix-turn-helix domain
ABFBJKDB_00098 6.7e-90 L PFAM Integrase catalytic region
ABFBJKDB_00099 9.6e-78 glnP P ABC transporter permease
ABFBJKDB_00100 1.2e-85 gluC P ABC transporter permease
ABFBJKDB_00101 1.5e-99 glnH ET ABC transporter
ABFBJKDB_00102 3.3e-103 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
ABFBJKDB_00103 1.3e-09
ABFBJKDB_00104 5e-98
ABFBJKDB_00105 3.1e-09 3.2.1.14 GH18
ABFBJKDB_00106 2.4e-53 zur P Belongs to the Fur family
ABFBJKDB_00107 3.7e-212 yfnA E Amino Acid
ABFBJKDB_00108 1.5e-148 whiA K May be required for sporulation
ABFBJKDB_00109 8.2e-153 ybhK S Required for morphogenesis under gluconeogenic growth conditions
ABFBJKDB_00110 7.5e-126 rapZ S Displays ATPase and GTPase activities
ABFBJKDB_00111 5.9e-80 ylbE GM NAD dependent epimerase dehydratase family protein
ABFBJKDB_00112 1.1e-83 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
ABFBJKDB_00113 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
ABFBJKDB_00114 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
ABFBJKDB_00115 6.1e-273 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
ABFBJKDB_00116 1.1e-112 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
ABFBJKDB_00117 7.4e-132 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
ABFBJKDB_00118 1.6e-26 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
ABFBJKDB_00119 4.1e-08 KT PspC domain protein
ABFBJKDB_00120 1e-84 phoR 2.7.13.3 T Histidine kinase
ABFBJKDB_00121 1e-85 K response regulator
ABFBJKDB_00122 4.5e-67 minJ O Domain present in PSD-95, Dlg, and ZO-1/2.
ABFBJKDB_00123 4.9e-164 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
ABFBJKDB_00124 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
ABFBJKDB_00125 3.1e-95 yeaN P Major Facilitator Superfamily
ABFBJKDB_00126 6e-81 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
ABFBJKDB_00127 1e-45 comFC S Competence protein
ABFBJKDB_00128 3.5e-127 comFA L Helicase C-terminal domain protein
ABFBJKDB_00129 1.6e-157 tagO 2.7.8.33, 2.7.8.35 M transferase
ABFBJKDB_00130 4.1e-296 ydaO E amino acid
ABFBJKDB_00131 9.7e-269 aha1 P COG COG0474 Cation transport ATPase
ABFBJKDB_00132 1.8e-271 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
ABFBJKDB_00133 2.4e-33 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
ABFBJKDB_00134 2.4e-33 S CAAX protease self-immunity
ABFBJKDB_00135 2.8e-98 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
ABFBJKDB_00136 1.2e-253 uup S ABC transporter, ATP-binding protein
ABFBJKDB_00137 3.8e-161 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
ABFBJKDB_00138 4.3e-28 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
ABFBJKDB_00139 2.8e-70 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
ABFBJKDB_00140 2.7e-140 ansA 3.5.1.1 EJ Asparaginase
ABFBJKDB_00141 5.5e-82 fat 3.1.2.21 I Acyl-ACP thioesterase
ABFBJKDB_00142 3.2e-92 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
ABFBJKDB_00143 1.4e-40 yabA L Involved in initiation control of chromosome replication
ABFBJKDB_00144 1.8e-83 holB 2.7.7.7 L DNA polymerase III
ABFBJKDB_00145 1.8e-65 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
ABFBJKDB_00146 1.3e-28 yaaL S Protein of unknown function (DUF2508)
ABFBJKDB_00147 2.2e-97 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ABFBJKDB_00148 7e-34 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
ABFBJKDB_00149 6.7e-211 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ABFBJKDB_00150 3.3e-62 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
ABFBJKDB_00151 6.4e-76 rsmC 2.1.1.172 J Methyltransferase
ABFBJKDB_00152 2.7e-27 nrdH O Glutaredoxin
ABFBJKDB_00153 4.8e-45 nrdI F NrdI Flavodoxin like
ABFBJKDB_00154 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABFBJKDB_00155 1e-160 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABFBJKDB_00156 2.1e-301 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
ABFBJKDB_00157 1.4e-54
ABFBJKDB_00158 1.4e-297 S membrane
ABFBJKDB_00159 6.8e-279 pbp2b 3.4.16.4 M Penicillin-binding Protein
ABFBJKDB_00160 1.8e-27 S Protein of unknown function (DUF3290)
ABFBJKDB_00161 2e-75 yviA S Protein of unknown function (DUF421)
ABFBJKDB_00162 4.9e-68 L PFAM transposase IS200-family protein
ABFBJKDB_00163 5.9e-125 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
ABFBJKDB_00164 2.6e-200 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
ABFBJKDB_00165 1.7e-54 tag 3.2.2.20 L glycosylase
ABFBJKDB_00166 3.2e-73 usp6 T universal stress protein
ABFBJKDB_00168 5.2e-189 rarA L recombination factor protein RarA
ABFBJKDB_00169 2e-24 yueI S Protein of unknown function (DUF1694)
ABFBJKDB_00170 7.5e-101 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
ABFBJKDB_00171 4.2e-56 ytsP 1.8.4.14 T GAF domain-containing protein
ABFBJKDB_00172 7.1e-173 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
ABFBJKDB_00173 9.9e-163 iscS2 2.8.1.7 E Aminotransferase class V
ABFBJKDB_00174 1.9e-196 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ABFBJKDB_00175 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
ABFBJKDB_00176 1.1e-136 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
ABFBJKDB_00177 6.2e-80 radC L DNA repair protein
ABFBJKDB_00178 4.5e-21 K Cold shock
ABFBJKDB_00179 1.8e-155 mreB D cell shape determining protein MreB
ABFBJKDB_00180 2.1e-88 mreC M Involved in formation and maintenance of cell shape
ABFBJKDB_00181 5.2e-55 mreD M rod shape-determining protein MreD
ABFBJKDB_00182 1.4e-76 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
ABFBJKDB_00183 1.8e-126 minD D Belongs to the ParA family
ABFBJKDB_00184 1.9e-94 glnP P ABC transporter permease
ABFBJKDB_00185 1.4e-89 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
ABFBJKDB_00186 1.8e-108 aatB ET ABC transporter substrate-binding protein
ABFBJKDB_00187 3.7e-99 D Alpha beta
ABFBJKDB_00188 1.6e-155 dapG 1.1.1.3, 2.7.2.4 E Amino acid kinase family
ABFBJKDB_00189 5.8e-08 S Protein of unknown function (DUF3397)
ABFBJKDB_00190 5.2e-64 mraZ K Belongs to the MraZ family
ABFBJKDB_00191 8e-142 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
ABFBJKDB_00192 2.5e-11 ftsL D cell division protein FtsL
ABFBJKDB_00193 8.4e-280 ftsI 3.4.16.4 M Penicillin-binding Protein
ABFBJKDB_00194 8.7e-136 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ABFBJKDB_00195 2.2e-185 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
ABFBJKDB_00196 1.4e-153 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
ABFBJKDB_00197 1.6e-61 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
ABFBJKDB_00198 5.2e-190 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
ABFBJKDB_00199 3.4e-180 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ABFBJKDB_00200 3.8e-33 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
ABFBJKDB_00201 3e-19 yggT S YGGT family
ABFBJKDB_00202 4.5e-82 ylmH S S4 domain protein
ABFBJKDB_00203 8.6e-62 divIVA D DivIVA domain protein
ABFBJKDB_00204 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ABFBJKDB_00205 2.5e-102 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
ABFBJKDB_00206 1.3e-73 draG O ADP-ribosylglycohydrolase
ABFBJKDB_00208 1.1e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
ABFBJKDB_00210 2.9e-137 cggR K Putative sugar-binding domain
ABFBJKDB_00211 6.1e-180 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
ABFBJKDB_00212 1.3e-208 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
ABFBJKDB_00213 2.3e-128 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
ABFBJKDB_00214 9.5e-234 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
ABFBJKDB_00215 5e-132 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ABFBJKDB_00216 5e-104 K response regulator
ABFBJKDB_00217 1.8e-169 T PhoQ Sensor
ABFBJKDB_00218 6.7e-146 lmrP E Major Facilitator Superfamily
ABFBJKDB_00219 9.2e-180 clcA P chloride
ABFBJKDB_00220 2.8e-19 secG U Preprotein translocase
ABFBJKDB_00221 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
ABFBJKDB_00222 6.9e-70 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
ABFBJKDB_00223 3.1e-42 yxjI
ABFBJKDB_00224 1.8e-116 ycsE S Sucrose-6F-phosphate phosphohydrolase
ABFBJKDB_00225 6.8e-106 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
ABFBJKDB_00226 1.3e-142 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
ABFBJKDB_00227 2.5e-56 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
ABFBJKDB_00228 3e-69 dnaQ 2.7.7.7 L DNA polymerase III
ABFBJKDB_00229 1.2e-115 murB 1.3.1.98 M Cell wall formation
ABFBJKDB_00230 2.4e-71 S Protein of unknown function (DUF1361)
ABFBJKDB_00231 8.5e-127 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
ABFBJKDB_00232 5.3e-68 ybbR S YbbR-like protein
ABFBJKDB_00233 2.6e-226 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABFBJKDB_00234 7.5e-29 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
ABFBJKDB_00235 5.3e-131 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
ABFBJKDB_00236 4.2e-21 cutC P Participates in the control of copper homeostasis
ABFBJKDB_00237 8.1e-198 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
ABFBJKDB_00238 5.9e-164 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
ABFBJKDB_00239 2.4e-60 ybaK J Aminoacyl-tRNA editing domain
ABFBJKDB_00240 7.5e-99 rrmA 2.1.1.187 H Methyltransferase
ABFBJKDB_00241 4.4e-86 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
ABFBJKDB_00242 3.5e-284 ftsK D Belongs to the FtsK SpoIIIE SftA family
ABFBJKDB_00243 7e-109 ymfF S Peptidase M16 inactive domain protein
ABFBJKDB_00244 2.4e-149 ymfH S Peptidase M16
ABFBJKDB_00245 2.4e-90 IQ Enoyl-(Acyl carrier protein) reductase
ABFBJKDB_00246 1.5e-63 ymfM S Helix-turn-helix domain
ABFBJKDB_00247 4.3e-85 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ABFBJKDB_00248 2.3e-159 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
ABFBJKDB_00249 2.6e-182 rny S Endoribonuclease that initiates mRNA decay
ABFBJKDB_00250 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
ABFBJKDB_00251 2.2e-226 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ABFBJKDB_00252 4.3e-72 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
ABFBJKDB_00253 1.1e-152 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
ABFBJKDB_00254 1e-182 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
ABFBJKDB_00255 7.8e-208 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
ABFBJKDB_00256 1.4e-12 yajC U Preprotein translocase
ABFBJKDB_00257 7.1e-10 S by MetaGeneAnnotator
ABFBJKDB_00262 4.6e-32
ABFBJKDB_00263 1.3e-15 GT2,GT4 L Phage minor structural protein
ABFBJKDB_00267 8.9e-14 S PFAM Holin toxin secretion phage lysis
ABFBJKDB_00270 1.9e-09 S RelB antitoxin
ABFBJKDB_00271 2.4e-23 S Bacterial toxin of type II toxin-antitoxin system, YafQ
ABFBJKDB_00272 4.4e-71 xerH L Belongs to the 'phage' integrase family
ABFBJKDB_00274 4.5e-51 D Phage-related minor tail protein
ABFBJKDB_00275 4.5e-59
ABFBJKDB_00276 2e-61
ABFBJKDB_00277 7.5e-87 fliC N bacterial-type flagellum-dependent cell motility
ABFBJKDB_00281 2.8e-11
ABFBJKDB_00282 6e-67 S regulation of transcription, DNA-dependent
ABFBJKDB_00283 1e-54 tlpA2 L Transposase IS200 like
ABFBJKDB_00284 6.6e-92 L Transposase, IS605 OrfB family
ABFBJKDB_00285 0.0 tetP J elongation factor G
ABFBJKDB_00286 9.2e-240 tetL EGP Major Facilitator Superfamily
ABFBJKDB_00287 2.6e-17 pre D Plasmid recombination enzyme
ABFBJKDB_00288 5e-55 repB L Initiator Replication protein
ABFBJKDB_00289 8.8e-53 L Protein involved in initiation of plasmid replication
ABFBJKDB_00290 5.3e-18
ABFBJKDB_00293 4e-48 L Resolvase, N terminal domain
ABFBJKDB_00294 2.3e-53 S Bacterial protein of unknown function (DUF961)
ABFBJKDB_00295 6.4e-31 S Bacterial protein of unknown function (DUF961)
ABFBJKDB_00296 0.0 pacL 3.6.3.8 P P-type ATPase
ABFBJKDB_00297 4.4e-111 3.1.4.46 C phosphodiesterase
ABFBJKDB_00298 1.2e-126 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
ABFBJKDB_00299 4.7e-102 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
ABFBJKDB_00300 3.7e-82 noc K Belongs to the ParB family
ABFBJKDB_00301 6.5e-118 soj D Sporulation initiation inhibitor
ABFBJKDB_00302 1.2e-107 spo0J K Belongs to the ParB family
ABFBJKDB_00303 1.8e-24 yyzM S Bacterial protein of unknown function (DUF951)
ABFBJKDB_00304 2.4e-190 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
ABFBJKDB_00305 5.5e-53 XK27_01040 S Protein of unknown function (DUF1129)
ABFBJKDB_00306 1.4e-94 S Bacterial membrane protein, YfhO
ABFBJKDB_00307 5e-51 I Alpha/beta hydrolase family
ABFBJKDB_00308 1.3e-40
ABFBJKDB_00309 1e-103 psaA P Belongs to the bacterial solute-binding protein 9 family
ABFBJKDB_00310 7e-100 fhuC P ABC transporter
ABFBJKDB_00311 2.8e-95 znuB U ABC 3 transport family
ABFBJKDB_00312 1.5e-55 S ECF transporter, substrate-specific component
ABFBJKDB_00313 3.4e-101 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
ABFBJKDB_00314 2.3e-89 S NADPH-dependent FMN reductase
ABFBJKDB_00315 1e-26 K helix_turn_helix, mercury resistance
ABFBJKDB_00316 2e-67 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
ABFBJKDB_00318 5.8e-154 EGP Major facilitator Superfamily
ABFBJKDB_00319 1.3e-58 S Haloacid dehalogenase-like hydrolase
ABFBJKDB_00320 2.4e-89 yvyE 3.4.13.9 S YigZ family
ABFBJKDB_00321 7.3e-38 S CAAX protease self-immunity
ABFBJKDB_00322 2.2e-116 cps1D M Domain of unknown function (DUF4422)
ABFBJKDB_00323 8.6e-62 S Glycosyltransferase like family 2
ABFBJKDB_00324 3.6e-141 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
ABFBJKDB_00325 9.4e-101 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
ABFBJKDB_00326 3.6e-180 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
ABFBJKDB_00327 2.1e-130 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
ABFBJKDB_00328 4.6e-117 nagZ 3.2.1.52 G Glycosyl hydrolase family 3 N terminal domain
ABFBJKDB_00329 7.5e-27 S zinc-ribbon domain
ABFBJKDB_00330 6.4e-79 S response to antibiotic
ABFBJKDB_00331 2e-95 M Glycosyl transferase family 8
ABFBJKDB_00332 4.4e-32 2.4.1.166 GT2 M Glycosyltransferase like family 2
ABFBJKDB_00333 4.9e-50 M Glycosyltransferase
ABFBJKDB_00334 1.3e-40 MA20_43635 M Capsular polysaccharide synthesis protein
ABFBJKDB_00336 3.6e-70 MA20_17390 GT4 M Glycosyl transferases group 1
ABFBJKDB_00337 2.4e-66 porS S Polysaccharide biosynthesis protein
ABFBJKDB_00338 1.1e-65 licD2 M LicD family
ABFBJKDB_00340 4.2e-72 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
ABFBJKDB_00341 8.4e-76 epsB M biosynthesis protein
ABFBJKDB_00342 1.3e-80 ywqD 2.7.10.1 D Capsular exopolysaccharide family
ABFBJKDB_00343 1.3e-110 ywqE 3.1.3.48 GM PHP domain protein
ABFBJKDB_00344 2.4e-125 brpA K Cell envelope-like function transcriptional attenuator common domain protein
ABFBJKDB_00345 9.1e-92 rfbP M Bacterial sugar transferase
ABFBJKDB_00346 1.1e-207 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
ABFBJKDB_00347 7.2e-53 perR P Belongs to the Fur family
ABFBJKDB_00348 9.9e-58 S LexA-binding, inner membrane-associated putative hydrolase
ABFBJKDB_00349 7e-94 sbcC L Putative exonuclease SbcCD, C subunit
ABFBJKDB_00350 3.7e-114 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
ABFBJKDB_00351 2.1e-36 M LysM domain protein
ABFBJKDB_00352 7.3e-18 poxB 1.2.3.3, 1.2.5.1 C Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
ABFBJKDB_00353 1.6e-251 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
ABFBJKDB_00354 1.4e-85 ddpX 3.4.13.22 E Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
ABFBJKDB_00355 1e-34 ygfC K Bacterial regulatory proteins, tetR family
ABFBJKDB_00356 7.7e-101 hrtB V ABC transporter permease
ABFBJKDB_00357 3.4e-86 devA 3.6.3.25 V ABC transporter, ATP-binding protein
ABFBJKDB_00358 5.2e-67 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
ABFBJKDB_00359 0.0 helD 3.6.4.12 L DNA helicase
ABFBJKDB_00360 8.9e-246 yjbQ P TrkA C-terminal domain protein
ABFBJKDB_00361 3.4e-23
ABFBJKDB_00362 1.2e-59 rpsI J Belongs to the universal ribosomal protein uS9 family
ABFBJKDB_00363 5.5e-77 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
ABFBJKDB_00364 1.2e-124 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
ABFBJKDB_00365 2.8e-108 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
ABFBJKDB_00366 6.7e-111 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
ABFBJKDB_00367 1.8e-100 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
ABFBJKDB_00368 4.8e-53 rplQ J Ribosomal protein L17
ABFBJKDB_00369 1.3e-155 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ABFBJKDB_00370 2.3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
ABFBJKDB_00371 4.4e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
ABFBJKDB_00372 2.5e-13 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
ABFBJKDB_00373 4.8e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
ABFBJKDB_00374 7.6e-107 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
ABFBJKDB_00375 4.4e-207 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
ABFBJKDB_00376 1e-67 rplO J Binds to the 23S rRNA
ABFBJKDB_00377 2.1e-22 rpmD J Ribosomal protein L30
ABFBJKDB_00378 1.3e-82 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
ABFBJKDB_00379 9.6e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
ABFBJKDB_00380 3.2e-87 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
ABFBJKDB_00381 2.5e-65 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
ABFBJKDB_00382 4.4e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
ABFBJKDB_00383 1.3e-91 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
ABFBJKDB_00384 7e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
ABFBJKDB_00385 5.1e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
ABFBJKDB_00386 8e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
ABFBJKDB_00387 9e-24 rpmC J Belongs to the universal ribosomal protein uL29 family
ABFBJKDB_00388 6.2e-73 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
ABFBJKDB_00389 5.2e-116 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
ABFBJKDB_00390 1.5e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
ABFBJKDB_00391 1e-44 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
ABFBJKDB_00392 1.4e-142 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
ABFBJKDB_00393 3.8e-39 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
ABFBJKDB_00394 1e-100 rplD J Forms part of the polypeptide exit tunnel
ABFBJKDB_00395 4.5e-109 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
ABFBJKDB_00396 3.7e-48 rpsJ J Involved in the binding of tRNA to the ribosomes
ABFBJKDB_00397 6.8e-165 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ABFBJKDB_00398 2.2e-79 K rpiR family
ABFBJKDB_00399 4.5e-54 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
ABFBJKDB_00400 5.5e-146 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
ABFBJKDB_00401 3.8e-21 K Acetyltransferase (GNAT) domain
ABFBJKDB_00402 2.9e-182 steT E amino acid
ABFBJKDB_00403 2.5e-23 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
ABFBJKDB_00404 1.6e-88 tal 2.2.1.2 F Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ABFBJKDB_00405 3e-276 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ABFBJKDB_00406 2e-232 tetP J elongation factor G
ABFBJKDB_00407 1.6e-31 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
ABFBJKDB_00409 6.9e-217 yjeM E Amino Acid
ABFBJKDB_00410 1.5e-56 yphA GM NAD dependent epimerase/dehydratase family
ABFBJKDB_00411 4.3e-75 K Helix-turn-helix domain, rpiR family
ABFBJKDB_00412 7.3e-92 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
ABFBJKDB_00413 1.3e-127 nanA 4.1.3.3, 4.3.3.7 EM Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
ABFBJKDB_00414 6.5e-90 nanK GK ROK family
ABFBJKDB_00415 1.1e-53 ndk 2.7.4.6 F Belongs to the NDK family
ABFBJKDB_00416 4.7e-65 G Xylose isomerase domain protein TIM barrel
ABFBJKDB_00417 1.7e-154 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
ABFBJKDB_00418 7.8e-208 nanT E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABFBJKDB_00419 8.5e-74 sdaAB 4.3.1.17 E Serine dehydratase beta chain
ABFBJKDB_00420 4.7e-112 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
ABFBJKDB_00421 5.9e-41 S Iron-sulfur cluster assembly protein
ABFBJKDB_00422 3.4e-67 S Protein of unknown function (DUF1440)
ABFBJKDB_00423 2.9e-81 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
ABFBJKDB_00424 2.7e-187 mtnE 2.6.1.83 E Aminotransferase
ABFBJKDB_00425 4.5e-16 S Phage Mu protein F like protein
ABFBJKDB_00426 1.1e-26 S Phage Mu protein F like protein
ABFBJKDB_00432 1.3e-06 S Domain of unknown function (DUF4355)
ABFBJKDB_00433 2e-97
ABFBJKDB_00434 1.4e-28 S Phage gp6-like head-tail connector protein
ABFBJKDB_00436 2.3e-14
ABFBJKDB_00437 2.2e-10 blpT
ABFBJKDB_00438 2.4e-70 xerD L Phage integrase, N-terminal SAM-like domain
ABFBJKDB_00439 2.4e-265 fbp 3.1.3.11 G phosphatase activity
ABFBJKDB_00441 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
ABFBJKDB_00442 3.9e-98 fabK 1.3.1.9 S Nitronate monooxygenase
ABFBJKDB_00443 4.7e-163 ytbD EGP Major facilitator Superfamily
ABFBJKDB_00444 5.2e-110 IQ NAD dependent epimerase/dehydratase family
ABFBJKDB_00445 9.9e-104 srlM 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Mga helix-turn-helix domain
ABFBJKDB_00446 4.5e-43 gutM K Glucitol operon activator protein (GutM)
ABFBJKDB_00447 4.8e-83 srlA G PTS system enzyme II sorbitol-specific factor
ABFBJKDB_00448 1.2e-135 srlE 2.7.1.198 G Sorbitol phosphotransferase enzyme II N-terminus
ABFBJKDB_00449 1.8e-36 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
ABFBJKDB_00450 1.3e-64 tal 2.2.1.2 H Transaldolase/Fructose-6-phosphate aldolase
ABFBJKDB_00451 5.9e-40 cps4C M Chain length determinant protein
ABFBJKDB_00452 1.8e-63 cpsD D AAA domain
ABFBJKDB_00453 4.5e-221 pglF 4.2.1.115, 4.2.1.135, 4.2.1.46 M Psort location CytoplasmicMembrane, score
ABFBJKDB_00454 1.5e-166 2.6.1.102 M Belongs to the DegT DnrJ EryC1 family
ABFBJKDB_00455 1.4e-76 epsL M Bacterial sugar transferase
ABFBJKDB_00456 6.5e-25 pglD 2.3.1.203 S Bacterial transferase hexapeptide (six repeats)
ABFBJKDB_00457 1.1e-121 2.4.1.52 GT4 M Glycosyl transferases group 1
ABFBJKDB_00458 1e-82 gtf1 2.4.1.52 GT4 M glycosyl transferase group 1
ABFBJKDB_00459 1.9e-34 M Glycosyltransferase Family 4
ABFBJKDB_00460 6.2e-30 M Glycosyltransferase Family 4
ABFBJKDB_00461 4.3e-41 GT2 S Glycosyltransferase
ABFBJKDB_00463 2.3e-46 ycbI M Glycosyl transferase family 2
ABFBJKDB_00464 1.1e-06 S EpsG family
ABFBJKDB_00465 1e-24 S Psort location Cytoplasmic, score
ABFBJKDB_00466 2.9e-16
ABFBJKDB_00467 5.2e-116 S Glycosyltransferase WbsX
ABFBJKDB_00468 5.7e-115 S Glycosyltransferase WbsX
ABFBJKDB_00469 3.4e-102 cps2I S Psort location CytoplasmicMembrane, score
ABFBJKDB_00470 1.1e-144 lspL 5.1.3.6 GM RmlD substrate binding domain
ABFBJKDB_00471 2.4e-178 ugd 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
ABFBJKDB_00472 1.1e-71 M Glycosyl transferases group 1
ABFBJKDB_00473 1.3e-69 M Glycosyl transferases group 1
ABFBJKDB_00474 5.8e-10
ABFBJKDB_00475 2.6e-83 qorB 1.6.5.2 GM NmrA-like family
ABFBJKDB_00476 1.5e-40 K Transcriptional regulator
ABFBJKDB_00477 1.3e-29 S CHY zinc finger
ABFBJKDB_00478 5e-86 1.1.1.1 C Zinc-binding dehydrogenase
ABFBJKDB_00480 3.4e-41 S Protein of unknown function (DUF1211)
ABFBJKDB_00481 2.3e-25 ybl78 L Conserved phage C-terminus (Phg_2220_C)
ABFBJKDB_00483 7.3e-41 wecD M Acetyltransferase (GNAT) family
ABFBJKDB_00484 1.4e-77 cps2D 5.1.3.2 M RmlD substrate binding domain
ABFBJKDB_00485 1.5e-66 H Methyltransferase domain
ABFBJKDB_00487 3.7e-16 K DNA-templated transcription, initiation
ABFBJKDB_00491 4.7e-71 S RRXRR protein
ABFBJKDB_00494 8.3e-48 rplU J This protein binds to 23S rRNA in the presence of protein L20
ABFBJKDB_00495 1e-27 ysxB J Cysteine protease Prp
ABFBJKDB_00496 1.6e-42 rpmA J Belongs to the bacterial ribosomal protein bL27 family
ABFBJKDB_00497 3.7e-12
ABFBJKDB_00499 1.7e-69
ABFBJKDB_00500 3.5e-110 cobQ S glutamine amidotransferase
ABFBJKDB_00501 1e-219 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
ABFBJKDB_00502 6.8e-86 tdk 2.7.1.21 F thymidine kinase
ABFBJKDB_00503 1e-177 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
ABFBJKDB_00504 1.4e-89 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
ABFBJKDB_00505 7.7e-135 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
ABFBJKDB_00506 5e-100 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
ABFBJKDB_00507 4.5e-97 atpB C it plays a direct role in the translocation of protons across the membrane
ABFBJKDB_00508 1.8e-15 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ABFBJKDB_00509 2.4e-39 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
ABFBJKDB_00510 4.1e-58 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ABFBJKDB_00511 6.3e-266 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
ABFBJKDB_00512 5.1e-141 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
ABFBJKDB_00513 1.7e-236 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
ABFBJKDB_00514 3e-48 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
ABFBJKDB_00515 4.1e-15 ywzB S Protein of unknown function (DUF1146)
ABFBJKDB_00516 7.1e-197 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ABFBJKDB_00517 3.4e-167 mbl D Cell shape determining protein MreB Mrl
ABFBJKDB_00518 9e-27 yidD S Could be involved in insertion of integral membrane proteins into the membrane
ABFBJKDB_00519 1.3e-13 S Protein of unknown function (DUF2969)
ABFBJKDB_00520 6.1e-187 rodA D Belongs to the SEDS family
ABFBJKDB_00521 4.6e-26 arsC 1.20.4.1 P Belongs to the ArsC family
ABFBJKDB_00522 5.6e-94 2.7.1.89 M Phosphotransferase enzyme family
ABFBJKDB_00523 3.4e-101 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
ABFBJKDB_00524 2.5e-21 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
ABFBJKDB_00525 2.2e-120 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ABFBJKDB_00526 4.6e-287 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ABFBJKDB_00527 1.3e-139 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ABFBJKDB_00528 1.3e-153 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
ABFBJKDB_00529 3.3e-90 stp 3.1.3.16 T phosphatase
ABFBJKDB_00530 7.5e-191 KLT serine threonine protein kinase
ABFBJKDB_00531 1.8e-111 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
ABFBJKDB_00532 3.8e-58 thiN 2.7.6.2 H thiamine pyrophosphokinase
ABFBJKDB_00533 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
ABFBJKDB_00534 4.5e-53 asp S Asp23 family, cell envelope-related function
ABFBJKDB_00535 1.3e-238 yloV S DAK2 domain fusion protein YloV
ABFBJKDB_00536 1.5e-246 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ABFBJKDB_00537 1.6e-140 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
ABFBJKDB_00538 7e-26 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABFBJKDB_00539 1.1e-100 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
ABFBJKDB_00540 8.8e-210 smc D Required for chromosome condensation and partitioning
ABFBJKDB_00541 7.2e-146 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
ABFBJKDB_00542 1.2e-39 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
ABFBJKDB_00543 5e-204 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ABFBJKDB_00544 3.6e-42 rpsP J Belongs to the bacterial ribosomal protein bS16 family
ABFBJKDB_00545 3.8e-27 ylqC S Belongs to the UPF0109 family
ABFBJKDB_00546 1.5e-57 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ABFBJKDB_00547 5.6e-114 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
ABFBJKDB_00548 3.3e-61 pat 2.3.1.183 M Acetyltransferase (GNAT) domain
ABFBJKDB_00549 8.2e-199 yfnA E amino acid
ABFBJKDB_00550 3e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
ABFBJKDB_00551 2e-71 L Belongs to the 'phage' integrase family
ABFBJKDB_00552 1.2e-118 L Belongs to the 'phage' integrase family
ABFBJKDB_00553 2.6e-33
ABFBJKDB_00556 1.3e-46 D Anion-transporting ATPase
ABFBJKDB_00557 1.5e-13
ABFBJKDB_00558 3.4e-18 L nuclease
ABFBJKDB_00559 1.6e-27 S Short C-terminal domain
ABFBJKDB_00561 3.1e-29 E Zn peptidase
ABFBJKDB_00562 1.2e-23 yvaO K Helix-turn-helix XRE-family like proteins
ABFBJKDB_00564 1.5e-24 XK27_07105 K Helix-turn-helix XRE-family like proteins
ABFBJKDB_00565 1.2e-127 K Phage regulatory protein
ABFBJKDB_00570 1.2e-74 S Siphovirus Gp157
ABFBJKDB_00571 1.3e-241 res L Helicase C-terminal domain protein
ABFBJKDB_00572 2e-114 L AAA domain
ABFBJKDB_00573 4.5e-83
ABFBJKDB_00574 5.2e-139 S Bifunctional DNA primase/polymerase, N-terminal
ABFBJKDB_00575 6.5e-232 S Virulence-associated protein E
ABFBJKDB_00576 8.2e-51 S VRR_NUC
ABFBJKDB_00577 6.2e-80 L An automated process has identified a potential problem with this gene model
ABFBJKDB_00580 3.5e-31 arpU S Phage transcriptional regulator, ArpU family
ABFBJKDB_00581 1.1e-32
ABFBJKDB_00584 4.6e-21
ABFBJKDB_00585 7.8e-86 L HNH nucleases
ABFBJKDB_00586 4.3e-83 L Phage terminase, small subunit
ABFBJKDB_00587 0.0 S Phage Terminase
ABFBJKDB_00589 4.7e-208 S Phage portal protein
ABFBJKDB_00590 1.2e-118 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
ABFBJKDB_00591 1.2e-222 S Phage capsid family
ABFBJKDB_00592 4.8e-22 S Phage gp6-like head-tail connector protein
ABFBJKDB_00593 2.9e-60 S Phage head-tail joining protein
ABFBJKDB_00594 1.1e-65 S Bacteriophage HK97-gp10, putative tail-component
ABFBJKDB_00595 2.7e-64 S Protein of unknown function (DUF806)
ABFBJKDB_00596 5.5e-124 S Phage tail tube protein
ABFBJKDB_00597 6.3e-54 S Phage tail assembly chaperone proteins, TAC
ABFBJKDB_00600 0.0 M Phage tail tape measure protein TP901
ABFBJKDB_00601 1.8e-137 S Phage tail protein
ABFBJKDB_00602 1.1e-280 rny D peptidase
ABFBJKDB_00605 3.9e-76 S Domain of unknown function (DUF2479)
ABFBJKDB_00609 1.8e-14 S by MetaGeneAnnotator
ABFBJKDB_00611 2e-21 S Bacteriophage holin of superfamily 6 (Holin_LLH)
ABFBJKDB_00612 2.9e-112 S N-acetylmuramoyl-L-alanine amidase activity
ABFBJKDB_00613 1.8e-32 rpsT J Binds directly to 16S ribosomal RNA
ABFBJKDB_00614 5.6e-40 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
ABFBJKDB_00615 1.8e-116 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABFBJKDB_00616 3.8e-267 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
ABFBJKDB_00617 8e-19 S Tetratricopeptide repeat
ABFBJKDB_00618 1.4e-215 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
ABFBJKDB_00619 7.8e-196 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
ABFBJKDB_00620 7.8e-198 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
ABFBJKDB_00621 3.9e-249 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
ABFBJKDB_00622 1.9e-300 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
ABFBJKDB_00623 5e-23 ykzG S Belongs to the UPF0356 family
ABFBJKDB_00624 9.5e-25
ABFBJKDB_00625 2.2e-86 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
ABFBJKDB_00626 2.6e-30 1.1.1.27 C L-malate dehydrogenase activity
ABFBJKDB_00627 1.2e-24 yktA S Belongs to the UPF0223 family
ABFBJKDB_00628 6.3e-76 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
ABFBJKDB_00629 0.0 typA T GTP-binding protein TypA
ABFBJKDB_00630 3.5e-148 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
ABFBJKDB_00631 7e-115 manY G PTS system
ABFBJKDB_00632 3.3e-148 manN G system, mannose fructose sorbose family IID component
ABFBJKDB_00633 3e-101 ftsW D Belongs to the SEDS family
ABFBJKDB_00634 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
ABFBJKDB_00635 1.1e-17 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
ABFBJKDB_00636 1e-72 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
ABFBJKDB_00637 4e-49 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
ABFBJKDB_00638 1.8e-131 ylbL T Belongs to the peptidase S16 family
ABFBJKDB_00639 2.9e-96 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
ABFBJKDB_00640 4.8e-30 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ABFBJKDB_00641 1.2e-102 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ABFBJKDB_00642 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ABFBJKDB_00643 5.5e-227 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
ABFBJKDB_00644 2.4e-139 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
ABFBJKDB_00645 1.2e-74 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ABFBJKDB_00646 8.5e-234 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
ABFBJKDB_00647 6e-161 purD 6.3.4.13 F Belongs to the GARS family
ABFBJKDB_00648 1.3e-108 S Acyltransferase family
ABFBJKDB_00649 7.5e-195 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABFBJKDB_00650 2.3e-122 K LysR substrate binding domain
ABFBJKDB_00652 2.2e-20
ABFBJKDB_00653 4e-58 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
ABFBJKDB_00654 9.8e-268 argS 6.1.1.19 J Arginyl-tRNA synthetase
ABFBJKDB_00655 3.1e-50 comEA L Competence protein ComEA
ABFBJKDB_00656 2e-69 comEB 3.5.4.12 F ComE operon protein 2
ABFBJKDB_00657 2.1e-86 comEC S Competence protein ComEC
ABFBJKDB_00658 5.4e-39 comEC S Competence protein ComEC
ABFBJKDB_00659 2.2e-105 holA 2.7.7.7 L DNA polymerase III delta subunit
ABFBJKDB_00660 1.3e-113 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
ABFBJKDB_00661 6.7e-137 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
ABFBJKDB_00662 1.7e-118 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
ABFBJKDB_00663 3.3e-95 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
ABFBJKDB_00664 3.4e-225 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
ABFBJKDB_00665 1.4e-36 ypmB S Protein conserved in bacteria
ABFBJKDB_00666 4e-143 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
ABFBJKDB_00667 7.6e-236 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
ABFBJKDB_00668 5.1e-56 dnaD L DnaD domain protein
ABFBJKDB_00669 1.5e-83 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ABFBJKDB_00670 5.8e-78 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ABFBJKDB_00671 9.6e-126 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
ABFBJKDB_00672 1.1e-91 M transferase activity, transferring glycosyl groups
ABFBJKDB_00673 2.4e-83 M Glycosyltransferase sugar-binding region containing DXD motif
ABFBJKDB_00674 5.8e-100 epsJ1 M Glycosyltransferase like family 2
ABFBJKDB_00677 6.4e-64 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
ABFBJKDB_00678 8.8e-58 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
ABFBJKDB_00679 2.8e-96 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
ABFBJKDB_00680 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
ABFBJKDB_00681 6.7e-72 ywlG S Belongs to the UPF0340 family
ABFBJKDB_00682 1.6e-129 C Oxidoreductase
ABFBJKDB_00683 2.4e-178 L transposase, IS605 OrfB family
ABFBJKDB_00684 6.6e-70 tlpA2 L Transposase IS200 like
ABFBJKDB_00685 1.6e-174 spoVK O PFAM ATPase family associated with various cellular activities (AAA)
ABFBJKDB_00686 3.1e-44 S Domain of unknown function (DUF3841)
ABFBJKDB_00687 4.9e-56 cdd 2.4.2.4, 3.5.4.5 F Cytidine and deoxycytidylate deaminase zinc-binding region
ABFBJKDB_00688 1.5e-103 S Domain of unknown function (DUF4343)
ABFBJKDB_00689 0.0 L helicase activity
ABFBJKDB_00690 1.1e-210 K DNA binding
ABFBJKDB_00691 0.0 res 2.1.1.72, 3.1.21.5 L Type III restriction enzyme, res subunit
ABFBJKDB_00692 3.3e-222 mod 2.1.1.72, 3.1.21.5 L DNA methylase
ABFBJKDB_00694 7.3e-18
ABFBJKDB_00695 2e-120 L Mrr N-terminal domain
ABFBJKDB_00697 6.4e-36 3.1.21.3 V Type I restriction modification DNA specificity domain
ABFBJKDB_00698 2.9e-209 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ABFBJKDB_00699 9.8e-146 yegS 2.7.1.107 G Lipid kinase
ABFBJKDB_00700 5.6e-256 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABFBJKDB_00701 1.6e-234 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
ABFBJKDB_00702 1.7e-37 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABFBJKDB_00703 7.1e-161 camS S sex pheromone
ABFBJKDB_00704 2.3e-279 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
ABFBJKDB_00705 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
ABFBJKDB_00706 3.5e-144 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
ABFBJKDB_00707 8.4e-104 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
ABFBJKDB_00708 1.4e-49 dhaM 2.7.1.121 S PTS system fructose IIA component
ABFBJKDB_00709 2.1e-68 dhaL 2.7.1.121 S Dak2
ABFBJKDB_00710 2e-151 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
ABFBJKDB_00711 7.9e-113 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
ABFBJKDB_00712 1.7e-61 K Bacterial regulatory proteins, tetR family
ABFBJKDB_00713 8.5e-209 brnQ U Component of the transport system for branched-chain amino acids
ABFBJKDB_00715 1.7e-111 endA F DNA RNA non-specific endonuclease
ABFBJKDB_00716 1.1e-75 XK27_02070 S Nitroreductase family
ABFBJKDB_00717 5.3e-193 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
ABFBJKDB_00718 3.8e-33 nmtR K helix_turn_helix, Arsenical Resistance Operon Repressor
ABFBJKDB_00719 6.1e-294 lai 4.2.1.53 S Myosin-crossreactive antigen
ABFBJKDB_00720 1.2e-221 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
ABFBJKDB_00721 6.9e-214 G phosphotransferase system
ABFBJKDB_00722 9.7e-91 licT K CAT RNA binding domain
ABFBJKDB_00723 9.4e-114 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
ABFBJKDB_00724 9.3e-59 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
ABFBJKDB_00725 5.1e-77 azlC E branched-chain amino acid
ABFBJKDB_00726 2.6e-31 azlD S Branched-chain amino acid transport protein (AzlD)
ABFBJKDB_00727 1.5e-56 ohrR K helix_turn_helix multiple antibiotic resistance protein
ABFBJKDB_00728 2.1e-55 jag S R3H domain protein
ABFBJKDB_00729 5.3e-54 K Transcriptional regulator C-terminal region
ABFBJKDB_00730 4.5e-44 thiT S Thiamine transporter protein (Thia_YuaJ)
ABFBJKDB_00731 6.2e-287 pepO 3.4.24.71 O Peptidase family M13
ABFBJKDB_00732 2.2e-111 dat 2.6.1.21 EH PFAM aminotransferase, class IV
ABFBJKDB_00733 5.6e-08 S SdpI/YhfL protein family
ABFBJKDB_00734 7.8e-72 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
ABFBJKDB_00735 6.7e-47 hmpT S ECF-type riboflavin transporter, S component
ABFBJKDB_00736 1.2e-41 wecD K Acetyltransferase GNAT Family
ABFBJKDB_00738 1.1e-34 tetR K transcriptional regulator
ABFBJKDB_00741 1e-09 3.1.3.48 D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ABFBJKDB_00743 7e-200 L transposition, DNA-mediated
ABFBJKDB_00744 9.4e-94 cca 2.7.7.19, 2.7.7.72 J Aminoglycoside-2''-adenylyltransferase
ABFBJKDB_00745 1.8e-22 K transcriptional regulator
ABFBJKDB_00746 5.1e-33 hchA S intracellular protease amidase
ABFBJKDB_00752 2.1e-07
ABFBJKDB_00762 1.4e-175 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
ABFBJKDB_00763 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
ABFBJKDB_00764 2.4e-192 cycA E Amino acid permease
ABFBJKDB_00765 1.1e-186 ytgP S Polysaccharide biosynthesis protein
ABFBJKDB_00766 1.1e-61 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
ABFBJKDB_00767 4.1e-81 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ABFBJKDB_00768 3.3e-192 pepV 3.5.1.18 E dipeptidase PepV
ABFBJKDB_00769 6.7e-258 cas3 L CRISPR-associated helicase cas3
ABFBJKDB_00770 1.2e-151 casA L the current gene model (or a revised gene model) may contain a frame shift
ABFBJKDB_00771 8.1e-22 casB S CRISPR-associated protein Cse2 (CRISPR_cse2)
ABFBJKDB_00772 1.5e-112 casC L CT1975-like protein
ABFBJKDB_00773 5.6e-60 casD S CRISPR-associated protein (Cas_Cas5)
ABFBJKDB_00774 6.2e-61 casE S CRISPR_assoc
ABFBJKDB_00775 3.2e-119 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
ABFBJKDB_00776 1.7e-82 cas2 2.7.7.7 L CRISPR-associated protein (Cas_Cas2CT1978)
ABFBJKDB_00778 3e-36
ABFBJKDB_00779 9.8e-66 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
ABFBJKDB_00780 4.2e-61 marR K Transcriptional regulator, MarR family
ABFBJKDB_00781 4.9e-102 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ABFBJKDB_00782 2.2e-27 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABFBJKDB_00783 5e-104 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
ABFBJKDB_00784 1.1e-98 IQ reductase
ABFBJKDB_00785 2.1e-195 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
ABFBJKDB_00786 1.7e-46 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
ABFBJKDB_00787 1e-64 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
ABFBJKDB_00788 4.2e-216 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
ABFBJKDB_00789 8e-125 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
ABFBJKDB_00790 5.1e-102 accA 2.1.3.15, 6.4.1.2 I alpha subunit
ABFBJKDB_00791 7.1e-109 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
ABFBJKDB_00792 5.1e-231 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
ABFBJKDB_00793 3.1e-30 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
ABFBJKDB_00794 3.9e-41 yjbH Q Thioredoxin
ABFBJKDB_00795 2.4e-97 pstS P Phosphate
ABFBJKDB_00796 5.4e-119 pstC P probably responsible for the translocation of the substrate across the membrane
ABFBJKDB_00797 3e-122 pstA P Phosphate transport system permease protein PstA
ABFBJKDB_00798 2.7e-114 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
ABFBJKDB_00799 1.1e-114 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
ABFBJKDB_00800 2.7e-56 P Plays a role in the regulation of phosphate uptake
ABFBJKDB_00801 1.8e-148 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
ABFBJKDB_00802 1.1e-79 S VIT family
ABFBJKDB_00803 9.4e-84 S membrane
ABFBJKDB_00804 7.3e-41 M1-874 K Domain of unknown function (DUF1836)
ABFBJKDB_00805 5.2e-65 hly S protein, hemolysin III
ABFBJKDB_00806 7.1e-35 K helix_turn_helix, Arsenical Resistance Operon Repressor
ABFBJKDB_00807 5.9e-75 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ABFBJKDB_00810 3e-14
ABFBJKDB_00811 1.3e-172 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
ABFBJKDB_00812 1.3e-158 ccpA K catabolite control protein A
ABFBJKDB_00813 4.8e-42 S VanZ like family
ABFBJKDB_00814 1.5e-119 yebC K Transcriptional regulatory protein
ABFBJKDB_00815 7.9e-102 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ABFBJKDB_00816 3.1e-120 comGA NU Type II IV secretion system protein
ABFBJKDB_00817 5.7e-98 comGB NU type II secretion system
ABFBJKDB_00818 1.2e-27 comGC U competence protein ComGC
ABFBJKDB_00819 5.6e-13
ABFBJKDB_00821 7.2e-11 S Putative Competence protein ComGF
ABFBJKDB_00823 2.6e-98 ytxK 2.1.1.72 L N-6 DNA Methylase
ABFBJKDB_00824 1.6e-183 cycA E Amino acid permease
ABFBJKDB_00825 3e-57 S Calcineurin-like phosphoesterase
ABFBJKDB_00826 2.8e-52 yutD S Protein of unknown function (DUF1027)
ABFBJKDB_00827 2.9e-113 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
ABFBJKDB_00828 7.8e-32 S Protein of unknown function (DUF1461)
ABFBJKDB_00829 5.1e-92 dedA S SNARE associated Golgi protein
ABFBJKDB_00830 4.2e-96 trxB2 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
ABFBJKDB_00831 8.8e-50 yugI 5.3.1.9 J general stress protein
ABFBJKDB_00834 1.2e-28 yedF O Belongs to the sulfur carrier protein TusA family
ABFBJKDB_00835 1.1e-148 yedE S Sulphur transport
ABFBJKDB_00836 7e-101 selD 2.7.9.3 E Synthesizes selenophosphate from selenide and ATP
ABFBJKDB_00837 1.2e-175 rnfC C RnfC Barrel sandwich hybrid domain
ABFBJKDB_00838 9e-29 yitW S Iron-sulfur cluster assembly protein
ABFBJKDB_00839 7e-110 selA 2.9.1.1 H Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis
ABFBJKDB_00840 5.1e-111 sufS 2.8.1.7, 4.4.1.16 E Serine hydroxymethyltransferase
ABFBJKDB_00841 9e-137 selB J Elongation factor SelB, winged helix
ABFBJKDB_00842 2.2e-07 S Protein of unknown function (DUF3343)
ABFBJKDB_00843 2e-48 yedF O Belongs to the sulfur carrier protein TusA family
ABFBJKDB_00844 4.5e-222 ybeC E amino acid
ABFBJKDB_00845 4.4e-94 XK27_00825 S Sulfite exporter TauE/SafE
ABFBJKDB_00846 7e-144 5.1.1.4 E Proline racemase
ABFBJKDB_00847 2.7e-66 3.5.1.1 EJ Glycine/sarcosine/betaine reductase component B subunits
ABFBJKDB_00848 4.7e-73 prdD S An automated process has identified a potential problem with this gene model
ABFBJKDB_00849 4.3e-31 S the current gene model (or a revised gene model) may contain a premature stop
ABFBJKDB_00850 2e-66 prdB 1.21.4.1, 1.21.4.2 S the current gene model (or a revised gene model) may contain a premature stop
ABFBJKDB_00851 7.1e-26 S Psort location Cytoplasmic, score
ABFBJKDB_00852 2.5e-235 prdA 1.21.4.1 EJ Glycine/sarcosine/betaine reductase component B subunits
ABFBJKDB_00854 2.2e-116 ynjE 2.8.1.11 P Rhodanese Homology Domain
ABFBJKDB_00855 2e-16 yeeD O Belongs to the sulfur carrier protein TusA family
ABFBJKDB_00856 6.9e-62 yeeE S Sulphur transport
ABFBJKDB_00857 3e-105 yraQ S Predicted permease
ABFBJKDB_00858 2.1e-125 yvgN C Aldo keto reductase
ABFBJKDB_00861 1.8e-07
ABFBJKDB_00863 1.9e-16
ABFBJKDB_00864 6.2e-09
ABFBJKDB_00869 1.6e-26 2.7.13.3 T protein histidine kinase activity
ABFBJKDB_00870 0.0 pepN 3.4.11.2 E aminopeptidase
ABFBJKDB_00871 1.1e-35
ABFBJKDB_00872 2e-111 ampC V Beta-lactamase
ABFBJKDB_00873 1.5e-31
ABFBJKDB_00874 2.6e-119 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
ABFBJKDB_00875 9.2e-206 glnP P ABC transporter
ABFBJKDB_00877 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
ABFBJKDB_00878 1.2e-160 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
ABFBJKDB_00879 1.5e-274 dnaK O Heat shock 70 kDa protein
ABFBJKDB_00880 4.2e-56 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
ABFBJKDB_00881 1.4e-131 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
ABFBJKDB_00882 2.5e-95 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
ABFBJKDB_00883 1.4e-119 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
ABFBJKDB_00884 1.3e-55 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
ABFBJKDB_00885 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
ABFBJKDB_00886 6.9e-26 ylxQ J ribosomal protein
ABFBJKDB_00887 1.4e-39 ylxR K Protein of unknown function (DUF448)
ABFBJKDB_00888 4.8e-170 nusA K Participates in both transcription termination and antitermination
ABFBJKDB_00889 2.7e-66 rimP J Required for maturation of 30S ribosomal subunits
ABFBJKDB_00890 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ABFBJKDB_00891 1.7e-259 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
ABFBJKDB_00892 4.1e-157 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
ABFBJKDB_00893 5.1e-102 cdsA 2.7.7.41 S Belongs to the CDS family
ABFBJKDB_00894 4.9e-105 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ABFBJKDB_00895 7.2e-82 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
ABFBJKDB_00896 6.3e-115 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
ABFBJKDB_00897 2.7e-48 S Domain of unknown function (DUF956)
ABFBJKDB_00898 8.4e-36 ogt 2.1.1.63 H Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABFBJKDB_00900 3.3e-23 pilD 3.4.23.43 NOU aspartic-type endopeptidase activity
ABFBJKDB_00901 6.1e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
ABFBJKDB_00902 1.3e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
ABFBJKDB_00903 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ABFBJKDB_00904 3.4e-92 cobB K NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form
ABFBJKDB_00905 1.7e-88 patB 4.4.1.8 E Aminotransferase, class I
ABFBJKDB_00906 2.5e-113 K response regulator
ABFBJKDB_00907 4.4e-142 hpk31 2.7.13.3 T Histidine kinase
ABFBJKDB_00908 7.2e-89 lacX 5.1.3.3 G Aldose 1-epimerase
ABFBJKDB_00909 1e-146 G Transporter, major facilitator family protein
ABFBJKDB_00910 2.6e-223 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
ABFBJKDB_00911 3.1e-244 yhcA V ABC transporter, ATP-binding protein
ABFBJKDB_00912 4.5e-35 K Bacterial regulatory proteins, tetR family
ABFBJKDB_00913 5.7e-63 lmrA V ABC transporter, ATP-binding protein
ABFBJKDB_00914 4.8e-124 lmrA V ABC transporter, ATP-binding protein
ABFBJKDB_00915 8e-21 yfiC V ABC transporter
ABFBJKDB_00916 3.6e-221 yfiC V ABC transporter
ABFBJKDB_00918 3.2e-45 yjcF K protein acetylation
ABFBJKDB_00919 1.1e-54 L phosphatase homologous to the C-terminal domain of histone macroH2A1
ABFBJKDB_00920 8.7e-72 lemA S LemA family
ABFBJKDB_00921 1.3e-114 htpX O Belongs to the peptidase M48B family
ABFBJKDB_00923 3.4e-271 helD 3.6.4.12 L DNA helicase
ABFBJKDB_00924 9.3e-128 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
ABFBJKDB_00925 8.8e-171 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
ABFBJKDB_00926 2.1e-102 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
ABFBJKDB_00927 2e-247 glnA 6.3.1.2 E glutamine synthetase
ABFBJKDB_00928 1.3e-45 glnR K Transcriptional regulator
ABFBJKDB_00929 1.8e-205 ynbB 4.4.1.1 P aluminum resistance
ABFBJKDB_00930 5.4e-111 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ABFBJKDB_00931 2.8e-16 WQ51_02665 S Protein of unknown function (DUF3042)
ABFBJKDB_00932 1.4e-45 yqhL P Rhodanese-like protein
ABFBJKDB_00933 4.7e-158 glk 2.7.1.2 G Glucokinase
ABFBJKDB_00934 1.5e-25 yqgQ S Bacterial protein of unknown function (DUF910)
ABFBJKDB_00935 2.8e-69 gluP 3.4.21.105 S Peptidase, S54 family
ABFBJKDB_00936 1.6e-38 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ABFBJKDB_00937 4.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
ABFBJKDB_00938 1.8e-19 D nuclear chromosome segregation
ABFBJKDB_00939 2.9e-76 yciQ P membrane protein (DUF2207)
ABFBJKDB_00940 5.4e-44 MA20_27270 S mazG nucleotide pyrophosphohydrolase
ABFBJKDB_00941 1.6e-92 engB D Necessary for normal cell division and for the maintenance of normal septation
ABFBJKDB_00942 2.9e-26 yneF S UPF0154 protein
ABFBJKDB_00943 2.2e-30 ynzC S UPF0291 protein
ABFBJKDB_00944 7.2e-83 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ABFBJKDB_00945 9.3e-178 recN L May be involved in recombinational repair of damaged DNA
ABFBJKDB_00946 6.6e-49 argR K Regulates arginine biosynthesis genes
ABFBJKDB_00947 1.2e-120 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
ABFBJKDB_00948 8e-83 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
ABFBJKDB_00949 1.2e-16 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
ABFBJKDB_00950 8.9e-147 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
ABFBJKDB_00951 1e-103 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ABFBJKDB_00952 4.2e-36 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ABFBJKDB_00953 3.7e-46 yqhY S Asp23 family, cell envelope-related function
ABFBJKDB_00954 2.1e-94 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ABFBJKDB_00955 1.3e-41 dut S dUTPase
ABFBJKDB_00956 3.2e-117
ABFBJKDB_00957 1.6e-104
ABFBJKDB_00958 5.6e-137 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
ABFBJKDB_00959 9.7e-24 acyP 3.6.1.7 C Belongs to the acylphosphatase family
ABFBJKDB_00960 1.6e-118 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
ABFBJKDB_00961 2.6e-48 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
ABFBJKDB_00962 7.6e-75 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
ABFBJKDB_00963 1.6e-115 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
ABFBJKDB_00964 5e-67 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
ABFBJKDB_00965 7.7e-84 nusG K Participates in transcription elongation, termination and antitermination
ABFBJKDB_00966 2.6e-11 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
ABFBJKDB_00967 2.1e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
ABFBJKDB_00968 7e-71 yacP S YacP-like NYN domain
ABFBJKDB_00969 1.6e-108 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABFBJKDB_00970 6.4e-56 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
ABFBJKDB_00971 3.6e-207 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
ABFBJKDB_00972 2.9e-247 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABFBJKDB_00973 8.2e-154 yacL S domain protein
ABFBJKDB_00974 1.6e-223 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
ABFBJKDB_00975 6.9e-74 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
ABFBJKDB_00976 4.3e-19 HA62_12640 S GCN5-related N-acetyl-transferase
ABFBJKDB_00977 5.8e-223 pepC 3.4.22.40 E Peptidase C1-like family
ABFBJKDB_00978 1e-33 S Enterocin A Immunity
ABFBJKDB_00979 2.9e-85 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
ABFBJKDB_00980 4.5e-129 mleP2 S Sodium Bile acid symporter family
ABFBJKDB_00981 4.6e-116 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ABFBJKDB_00983 3.6e-44 ydcK S Belongs to the SprT family
ABFBJKDB_00984 8.2e-251 yhgF K Tex-like protein N-terminal domain protein
ABFBJKDB_00985 1.4e-129 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
ABFBJKDB_00986 3.3e-243 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
ABFBJKDB_00987 2.1e-89 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
ABFBJKDB_00988 4.9e-96 gntR1 K UbiC transcription regulator-associated domain protein
ABFBJKDB_00989 4.6e-90 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
ABFBJKDB_00991 1.1e-07
ABFBJKDB_00992 1.6e-197 dtpT U amino acid peptide transporter
ABFBJKDB_00993 1.1e-59 uspA T Universal stress protein family
ABFBJKDB_00994 0.0 clpL O C-terminal, D2-small domain, of ClpB protein
ABFBJKDB_00995 1.1e-25
ABFBJKDB_00996 2.2e-201 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
ABFBJKDB_00997 1e-109 puuD S peptidase C26
ABFBJKDB_00998 4e-83 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ABFBJKDB_00999 3.6e-149 lsa S ABC transporter
ABFBJKDB_01000 9.4e-149 mepA V MATE efflux family protein
ABFBJKDB_01001 1.4e-38 arbx M family 8
ABFBJKDB_01003 2.4e-31 M Glycosyltransferase like family 2
ABFBJKDB_01004 1.1e-69 nss M transferase activity, transferring glycosyl groups
ABFBJKDB_01005 8.7e-37 M Glycosyl transferase family 8
ABFBJKDB_01006 3.5e-55 nss M transferase activity, transferring glycosyl groups
ABFBJKDB_01008 1.1e-18 arbx M family 8
ABFBJKDB_01009 1.4e-07 M Glycosyltransferase like family 2
ABFBJKDB_01010 2e-66 nss M transferase activity, transferring glycosyl groups
ABFBJKDB_01011 7.3e-109 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
ABFBJKDB_01012 9e-34 yxaB 2.4.1.166 GT2 M Glycosyltransferase like family 2
ABFBJKDB_01013 1.8e-151 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
ABFBJKDB_01014 2.5e-08 L Helix-turn-helix domain
ABFBJKDB_01016 1.4e-10 L Helix-turn-helix domain
ABFBJKDB_01017 8.6e-81 L hmm pf00665
ABFBJKDB_01019 5.4e-24 3.2.1.18 GH33 M Rib/alpha-like repeat
ABFBJKDB_01022 2.2e-194 tnpB L Putative transposase DNA-binding domain
ABFBJKDB_01026 6.4e-43
ABFBJKDB_01027 4.7e-35
ABFBJKDB_01028 3.1e-151 gp17a S Terminase-like family
ABFBJKDB_01029 1.3e-07
ABFBJKDB_01030 2.7e-10
ABFBJKDB_01032 3.4e-08 hup L Belongs to the bacterial histone-like protein family
ABFBJKDB_01034 5e-24
ABFBJKDB_01038 7.5e-40 S Replication initiator protein A (RepA) N-terminus
ABFBJKDB_01039 3.6e-75 soj D CobQ CobB MinD ParA nucleotide binding domain protein
ABFBJKDB_01054 1.6e-13 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
ABFBJKDB_01062 1.7e-79 S DNA binding
ABFBJKDB_01064 1.1e-15 S Plasmid maintenance system killer
ABFBJKDB_01067 3.9e-62 L Belongs to the 'phage' integrase family
ABFBJKDB_01069 2.1e-13 2.7.1.24 H dephospho-CoA kinase activity
ABFBJKDB_01070 3.9e-155 V RRXRR protein
ABFBJKDB_01072 4.4e-09
ABFBJKDB_01073 3.1e-10 L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
ABFBJKDB_01074 5.4e-57
ABFBJKDB_01075 4.5e-11
ABFBJKDB_01077 1.4e-95 3.6.4.12 L DnaB-like helicase C terminal domain
ABFBJKDB_01080 7.7e-114 recD 3.1.11.5 L Helix-hairpin-helix containing domain
ABFBJKDB_01083 5.7e-90 S nicotinamide riboside transmembrane transporter activity
ABFBJKDB_01090 3.5e-45 gepA S Protein of unknown function (DUF4065)
ABFBJKDB_01098 2.1e-12 nrdH O Glutaredoxin-like protein
ABFBJKDB_01101 5.8e-140 L transposase, IS605 OrfB family
ABFBJKDB_01103 1.1e-74 dck 2.7.1.74 F deoxynucleoside kinase
ABFBJKDB_01105 1.5e-40 ntd 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
ABFBJKDB_01108 1.1e-53 L Phage integrase family
ABFBJKDB_01110 1.9e-49 tdk 2.7.1.21 F Thymidine kinase
ABFBJKDB_01115 9.2e-132 L transposase, IS605 OrfB family
ABFBJKDB_01116 1.5e-15 S protein disulfide oxidoreductase activity
ABFBJKDB_01118 5.5e-68 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
ABFBJKDB_01119 3.5e-35 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
ABFBJKDB_01127 7.9e-21
ABFBJKDB_01133 9.4e-39 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
ABFBJKDB_01134 2.5e-45 L DNA restriction-modification system
ABFBJKDB_01135 5.7e-70 2.1.1.72 L DNA methylase
ABFBJKDB_01143 5.5e-18 S Protein of unknown function (DUF1064)
ABFBJKDB_01144 2.1e-66 S DNA ligase (ATP) activity
ABFBJKDB_01146 1.2e-227 dnaE_2 2.7.7.7 L DNA polymerase
ABFBJKDB_01147 1.7e-07
ABFBJKDB_01148 3.8e-48 S PD-(D/E)XK nuclease superfamily
ABFBJKDB_01149 6.9e-30 S DNA primase activity
ABFBJKDB_01151 1.3e-86 S Glycosyl hydrolases family 25
ABFBJKDB_01152 3.2e-08 S regulation of transcription, DNA-dependent
ABFBJKDB_01153 3.1e-240 pgi 5.3.1.9 G Belongs to the GPI family
ABFBJKDB_01154 6.7e-301 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
ABFBJKDB_01155 1.3e-118 gla U Major intrinsic protein
ABFBJKDB_01156 1.5e-45 ykuL S CBS domain
ABFBJKDB_01157 3e-61 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
ABFBJKDB_01158 2.4e-177 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
ABFBJKDB_01159 2.6e-86 ykuT M mechanosensitive ion channel
ABFBJKDB_01161 2.8e-283 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
ABFBJKDB_01162 2e-21 yheA S Belongs to the UPF0342 family
ABFBJKDB_01163 7.3e-127 yhaM S Metal dependent phosphohydrolases with conserved 'HD' motif.
ABFBJKDB_01164 2.5e-113 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
ABFBJKDB_01166 7e-53 hit FG histidine triad
ABFBJKDB_01167 9.8e-95 ecsA V ABC transporter, ATP-binding protein
ABFBJKDB_01168 2.2e-72 ecsB U ABC transporter
ABFBJKDB_01169 1.6e-98 ytmP 2.7.1.89 M Choline/ethanolamine kinase
ABFBJKDB_01170 3.9e-100 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
ABFBJKDB_01171 4e-45 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
ABFBJKDB_01172 1.8e-76 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
ABFBJKDB_01173 1.7e-238 sftA D Belongs to the FtsK SpoIIIE SftA family
ABFBJKDB_01174 3.8e-222 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
ABFBJKDB_01175 2.5e-61 phaJ I N-terminal half of MaoC dehydratase
ABFBJKDB_01176 3e-69 ybhL S Belongs to the BI1 family
ABFBJKDB_01177 1.2e-36
ABFBJKDB_01178 2.7e-128 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
ABFBJKDB_01179 7.2e-128 rpsB J Belongs to the universal ribosomal protein uS2 family
ABFBJKDB_01180 1.5e-27 yazA L GIY-YIG catalytic domain protein
ABFBJKDB_01181 8.5e-94 yabB 2.1.1.223 L Methyltransferase small domain
ABFBJKDB_01182 4e-89 plsC 2.3.1.51 I Acyltransferase
ABFBJKDB_01183 1.9e-25 rpmF J Belongs to the bacterial ribosomal protein bL32 family
ABFBJKDB_01184 3.5e-57 yceD S Uncharacterized ACR, COG1399
ABFBJKDB_01185 1.3e-122 ylbM S Belongs to the UPF0348 family
ABFBJKDB_01186 5.5e-82 H Nodulation protein S (NodS)
ABFBJKDB_01187 5.1e-49 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
ABFBJKDB_01188 4.7e-71 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
ABFBJKDB_01189 3.5e-77 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
ABFBJKDB_01190 1e-29 yhbY J RNA-binding protein
ABFBJKDB_01191 3e-180 yqeH S Ribosome biogenesis GTPase YqeH
ABFBJKDB_01192 2.5e-71 yqeG S HAD phosphatase, family IIIA
ABFBJKDB_01193 7.7e-53 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
ABFBJKDB_01194 1.4e-24 rpmI J Belongs to the bacterial ribosomal protein bL35 family
ABFBJKDB_01195 1.3e-79 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
ABFBJKDB_01196 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
ABFBJKDB_01197 9.7e-108 dnaI L Primosomal protein DnaI
ABFBJKDB_01198 2.8e-79 dnaB L replication initiation and membrane attachment
ABFBJKDB_01199 6.1e-66 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
ABFBJKDB_01200 7.8e-50 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
ABFBJKDB_01201 1.5e-107 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
ABFBJKDB_01202 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ABFBJKDB_01203 5.1e-20 L PFAM transposase IS3 IS911 family protein
ABFBJKDB_01204 2.1e-61 L Integrase core domain
ABFBJKDB_01205 7.5e-19 L Integrase core domain
ABFBJKDB_01206 2.6e-129 EGP Major Facilitator Superfamily
ABFBJKDB_01207 1.7e-99 EGP Major Facilitator Superfamily
ABFBJKDB_01208 1.3e-72 K Transcriptional regulator, LysR family
ABFBJKDB_01209 5.6e-139 G Xylose isomerase-like TIM barrel
ABFBJKDB_01210 4.6e-117 IQ Enoyl-(Acyl carrier protein) reductase
ABFBJKDB_01211 6.1e-217 1.3.5.4 C FAD binding domain
ABFBJKDB_01212 6.5e-138 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
ABFBJKDB_01213 5.9e-71 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
ABFBJKDB_01214 1.4e-142 xerS L Phage integrase family
ABFBJKDB_01218 8e-105 cbh 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
ABFBJKDB_01219 1.6e-71 ptp3 3.1.3.48 T Tyrosine phosphatase family
ABFBJKDB_01220 1.1e-67 desR K helix_turn_helix, Lux Regulon
ABFBJKDB_01221 5.4e-57 desK 2.7.13.3 T Histidine kinase
ABFBJKDB_01222 1.1e-53 yvfS V ABC-2 type transporter
ABFBJKDB_01223 8.9e-79 yvfR V ABC transporter
ABFBJKDB_01224 4.6e-99 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
ABFBJKDB_01234 2.2e-131 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
ABFBJKDB_01235 7.2e-186 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
ABFBJKDB_01236 6.3e-159 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
ABFBJKDB_01237 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
ABFBJKDB_01238 1.9e-119 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
ABFBJKDB_01240 1.6e-55 ctsR K Belongs to the CtsR family
ABFBJKDB_01241 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
ABFBJKDB_01242 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ABFBJKDB_01243 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ABFBJKDB_01244 2.1e-36 yrzL S Belongs to the UPF0297 family
ABFBJKDB_01245 5.2e-59 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ABFBJKDB_01246 1.9e-33 yrzB S Belongs to the UPF0473 family
ABFBJKDB_01247 1.4e-15 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
ABFBJKDB_01248 8e-17 cvpA S Colicin V production protein
ABFBJKDB_01249 2.9e-310 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
ABFBJKDB_01250 9.9e-41 trxA O Belongs to the thioredoxin family
ABFBJKDB_01251 1.1e-60 yslB S Protein of unknown function (DUF2507)
ABFBJKDB_01252 5e-73 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
ABFBJKDB_01253 1.5e-41 S Phosphoesterase
ABFBJKDB_01256 1.3e-139 hprA 1.1.1.29 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ABFBJKDB_01257 1.9e-306 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
ABFBJKDB_01258 2.2e-214 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
ABFBJKDB_01259 4.3e-200 oatA I Acyltransferase
ABFBJKDB_01260 1.8e-16
ABFBJKDB_01262 1.5e-140 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
ABFBJKDB_01263 1.7e-100 XK27_05435 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
ABFBJKDB_01264 8.9e-219 recJ L Single-stranded-DNA-specific exonuclease RecJ
ABFBJKDB_01265 9.6e-81 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
ABFBJKDB_01266 6.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
ABFBJKDB_01267 3.3e-63 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
ABFBJKDB_01268 4.8e-45 rpsF J Binds together with S18 to 16S ribosomal RNA
ABFBJKDB_01269 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
ABFBJKDB_01270 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
ABFBJKDB_01271 7.1e-153 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
ABFBJKDB_01272 9e-20 yaaA S S4 domain protein YaaA
ABFBJKDB_01273 8.6e-159 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
ABFBJKDB_01274 2.1e-204 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ABFBJKDB_01275 3.4e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
ABFBJKDB_01276 2.2e-49 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
ABFBJKDB_01277 4.1e-105 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
ABFBJKDB_01278 1.1e-199 nupG F Nucleoside
ABFBJKDB_01279 1.5e-122 MA20_14895 S Conserved hypothetical protein 698
ABFBJKDB_01280 1.7e-53 K LysR substrate binding domain
ABFBJKDB_01281 1.8e-07
ABFBJKDB_01282 6e-66 yxkH G Polysaccharide deacetylase
ABFBJKDB_01283 9e-30 yqkB S Belongs to the HesB IscA family
ABFBJKDB_01284 1.4e-141 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
ABFBJKDB_01285 3.2e-86 S (CBS) domain
ABFBJKDB_01286 4.8e-158 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
ABFBJKDB_01287 6.5e-75 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
ABFBJKDB_01288 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ABFBJKDB_01289 4.7e-139 yabM S Polysaccharide biosynthesis protein
ABFBJKDB_01290 3.6e-31 yabO J S4 domain protein
ABFBJKDB_01291 2.3e-18 divIC D Septum formation initiator
ABFBJKDB_01292 1.1e-40 yabR J RNA binding
ABFBJKDB_01293 7.2e-96 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
ABFBJKDB_01294 1.9e-76 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
ABFBJKDB_01295 3e-282 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABFBJKDB_01296 2e-131 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
ABFBJKDB_01297 3.6e-169 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABFBJKDB_01298 5.1e-260 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
ABFBJKDB_01299 1.6e-22 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
ABFBJKDB_01300 8.2e-16
ABFBJKDB_01301 1.4e-111 rssA S Phospholipase, patatin family
ABFBJKDB_01302 4.4e-136 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
ABFBJKDB_01303 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
ABFBJKDB_01304 7.3e-45 S VIT family
ABFBJKDB_01305 1.2e-239 sufB O assembly protein SufB
ABFBJKDB_01306 1.4e-40 nifU C SUF system FeS assembly protein, NifU family
ABFBJKDB_01307 8.2e-147 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ABFBJKDB_01308 1.2e-142 sufD O FeS assembly protein SufD
ABFBJKDB_01309 8.1e-116 sufC O FeS assembly ATPase SufC
ABFBJKDB_01310 2.5e-223 E ABC transporter, substratebinding protein
ABFBJKDB_01315 2.4e-15 S HicB family
ABFBJKDB_01316 7.5e-18 hicA S HicA toxin of bacterial toxin-antitoxin,
ABFBJKDB_01320 2.9e-170 L Probable transposase
ABFBJKDB_01321 6.2e-69 rny D Peptidase family M23
ABFBJKDB_01323 9.6e-137 tetA EGP Major facilitator Superfamily
ABFBJKDB_01324 1.8e-32 yvdC S MazG nucleotide pyrophosphohydrolase domain
ABFBJKDB_01325 1.6e-213 yjeM E Amino Acid
ABFBJKDB_01326 1.3e-08 L transposase activity
ABFBJKDB_01327 1.3e-137 O ATPase family associated with various cellular activities (AAA)
ABFBJKDB_01328 8.4e-283 E Subtilase family
ABFBJKDB_01329 2.1e-189 glnPH2 P ABC transporter permease
ABFBJKDB_01330 2.3e-112 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
ABFBJKDB_01331 4.8e-44 E GDSL-like Lipase/Acylhydrolase
ABFBJKDB_01332 6e-134 coaA 2.7.1.33 F Pantothenic acid kinase
ABFBJKDB_01333 1.3e-274 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
ABFBJKDB_01334 8.3e-48 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
ABFBJKDB_01335 1.4e-154 oppF P Belongs to the ABC transporter superfamily
ABFBJKDB_01336 1.3e-180 oppD P Belongs to the ABC transporter superfamily
ABFBJKDB_01337 3.7e-169 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABFBJKDB_01338 7.9e-142 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABFBJKDB_01339 4e-202 oppA E ABC transporter, substratebinding protein
ABFBJKDB_01340 1.6e-218 yifK E Amino acid permease
ABFBJKDB_01341 1.1e-85 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ABFBJKDB_01342 1.8e-57 ybjI 3.1.3.102, 3.1.3.104, 3.1.3.23 S Sucrose-6F-phosphate phosphohydrolase
ABFBJKDB_01343 6.5e-66 pgm3 G phosphoglycerate mutase family
ABFBJKDB_01344 1e-252 ctpA 3.6.3.54 P P-type ATPase
ABFBJKDB_01345 1.9e-21 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
ABFBJKDB_01346 6.8e-44 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
ABFBJKDB_01347 1.6e-149 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
ABFBJKDB_01348 5.4e-181 EG GntP family permease
ABFBJKDB_01349 2.1e-94 KT Putative sugar diacid recognition
ABFBJKDB_01350 2.3e-219 cydD CO ABC transporter transmembrane region
ABFBJKDB_01351 3.5e-204 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
ABFBJKDB_01352 2.5e-141 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
ABFBJKDB_01353 7.9e-194 cydA 1.10.3.14 C ubiquinol oxidase
ABFBJKDB_01354 6.9e-160 asnA 6.3.1.1 F aspartate--ammonia ligase
ABFBJKDB_01355 1.8e-13 xlyB 3.5.1.28 CBM50 M LysM domain
ABFBJKDB_01356 5e-19 glpE P Rhodanese Homology Domain
ABFBJKDB_01357 5.5e-49 lytE M LysM domain protein
ABFBJKDB_01358 2.6e-91 T Calcineurin-like phosphoesterase superfamily domain
ABFBJKDB_01359 5.7e-85 2.7.7.12 C Domain of unknown function (DUF4931)
ABFBJKDB_01360 4.6e-182 L Probable transposase
ABFBJKDB_01361 3e-38 S Sulfite exporter TauE/SafE
ABFBJKDB_01362 1.8e-70 K Sugar-specific transcriptional regulator TrmB
ABFBJKDB_01363 4.6e-168 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
ABFBJKDB_01364 5.7e-80 pepS E Thermophilic metalloprotease (M29)
ABFBJKDB_01365 6e-72 pepS E Thermophilic metalloprotease (M29)
ABFBJKDB_01366 3.8e-08 E Amino acid permease
ABFBJKDB_01367 1.5e-243 E Amino acid permease
ABFBJKDB_01368 2.4e-84 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
ABFBJKDB_01369 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
ABFBJKDB_01370 5.9e-79 galM 5.1.3.3 G Aldose 1-epimerase
ABFBJKDB_01371 4.3e-213 malT G Transporter, major facilitator family protein
ABFBJKDB_01372 9.4e-101 malR K Transcriptional regulator, LacI family
ABFBJKDB_01373 1e-279 kup P Transport of potassium into the cell
ABFBJKDB_01375 2e-20 S Domain of unknown function (DUF3284)
ABFBJKDB_01376 2e-159 yfmL L DEAD DEAH box helicase
ABFBJKDB_01377 7e-128 mocA S Oxidoreductase
ABFBJKDB_01378 3.4e-24 S Domain of unknown function (DUF4828)
ABFBJKDB_01379 1.2e-175 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
ABFBJKDB_01380 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
ABFBJKDB_01381 9.4e-195 glgA 2.4.1.21 GT5 F Synthesizes alpha-1,4-glucan chains using ADP-glucose
ABFBJKDB_01382 4e-119 glgD 2.4.1.21, 2.7.7.27 GT5 G Nucleotidyl transferase
ABFBJKDB_01383 2.6e-163 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
ABFBJKDB_01384 2.1e-266 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
ABFBJKDB_01385 6.1e-220 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
ABFBJKDB_01386 1.1e-41 O ADP-ribosylglycohydrolase
ABFBJKDB_01387 5.5e-221 gdhA 1.4.1.4 E Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
ABFBJKDB_01388 7.6e-210 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
ABFBJKDB_01389 2.8e-34 K GNAT family
ABFBJKDB_01390 1.7e-40
ABFBJKDB_01392 1.6e-159 mgtE P Acts as a magnesium transporter
ABFBJKDB_01393 8.4e-93 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
ABFBJKDB_01394 7.6e-117 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ABFBJKDB_01395 7.2e-94 yjbM 2.7.6.5 S RelA SpoT domain protein
ABFBJKDB_01396 8.1e-256 topB 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
ABFBJKDB_01397 3.1e-34 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
ABFBJKDB_01398 1.7e-193 pbuX F xanthine permease
ABFBJKDB_01399 3.3e-74 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
ABFBJKDB_01400 6.3e-61 acmC 3.2.1.96 NU mannosyl-glycoprotein
ABFBJKDB_01401 3.2e-64 S ECF transporter, substrate-specific component
ABFBJKDB_01402 3.9e-128 mleP S Sodium Bile acid symporter family
ABFBJKDB_01403 1.7e-248 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
ABFBJKDB_01404 6.2e-72 mleR K LysR family
ABFBJKDB_01405 1.1e-56 K transcriptional
ABFBJKDB_01406 2.6e-41 K Bacterial regulatory proteins, tetR family
ABFBJKDB_01407 6.1e-60 T Belongs to the universal stress protein A family
ABFBJKDB_01408 1.1e-43 K Copper transport repressor CopY TcrY
ABFBJKDB_01409 9.1e-50 3.2.1.18 GH33 M Rib/alpha-like repeat
ABFBJKDB_01410 1e-148 3.2.1.18 GH33 M Rib/alpha-like repeat
ABFBJKDB_01411 1.9e-95 ypuA S Protein of unknown function (DUF1002)
ABFBJKDB_01412 1.1e-59 dedA 3.1.3.1 S SNARE associated Golgi protein
ABFBJKDB_01413 1.4e-162 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ABFBJKDB_01414 9.3e-37 yncA 2.3.1.79 S Maltose acetyltransferase
ABFBJKDB_01415 3.4e-205 yflS P Sodium:sulfate symporter transmembrane region
ABFBJKDB_01416 1.4e-198 frdC 1.3.5.4 C FAD binding domain
ABFBJKDB_01417 1.9e-237 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
ABFBJKDB_01418 5.7e-14 ybaN S Protein of unknown function (DUF454)
ABFBJKDB_01419 7.5e-178 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
ABFBJKDB_01420 1.1e-59 L Probable transposase
ABFBJKDB_01421 9.1e-143 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
ABFBJKDB_01422 6.6e-38 S Replication initiator protein A (RepA) N-terminus
ABFBJKDB_01423 9.4e-109 L Initiator Replication protein
ABFBJKDB_01426 4e-179 L PLD-like domain
ABFBJKDB_01427 1.8e-78 S Fic/DOC family
ABFBJKDB_01428 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
ABFBJKDB_01429 1.5e-58 K DeoR C terminal sensor domain
ABFBJKDB_01430 2.8e-143 tarJ 1.1.1.303, 1.1.1.4, 1.1.1.405 E Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate
ABFBJKDB_01431 2.9e-25 2.7.1.191 G PTS system fructose IIA component
ABFBJKDB_01432 7.8e-45 2.7.1.191 G PTS system sorbose subfamily IIB component
ABFBJKDB_01433 5.5e-101 G PTS system sorbose-specific iic component
ABFBJKDB_01434 1.6e-117 G PTS system mannose/fructose/sorbose family IID component
ABFBJKDB_01435 4.3e-89 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
ABFBJKDB_01436 8.8e-168 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
ABFBJKDB_01437 3.4e-127 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
ABFBJKDB_01438 1.9e-177 thrC 4.2.3.1 E Threonine synthase
ABFBJKDB_01439 9.7e-75 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
ABFBJKDB_01440 1.1e-61 S Psort location CytoplasmicMembrane, score
ABFBJKDB_01441 1.3e-87 waaB GT4 M Glycosyl transferases group 1
ABFBJKDB_01442 6.2e-59 cps3F
ABFBJKDB_01443 1.2e-69 M Domain of unknown function (DUF4422)
ABFBJKDB_01444 5.4e-149 XK27_08315 M Sulfatase
ABFBJKDB_01445 1.3e-74 G Peptidase_C39 like family
ABFBJKDB_01446 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
ABFBJKDB_01447 1.2e-160 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
ABFBJKDB_01448 8.1e-96 dacA 3.4.16.4 M Belongs to the peptidase S11 family
ABFBJKDB_01449 1.9e-67 XK27_09620 S NADPH-dependent FMN reductase
ABFBJKDB_01450 2.9e-158 XK27_09615 S reductase
ABFBJKDB_01451 4.4e-39 2.7.7.65 T phosphorelay sensor kinase activity
ABFBJKDB_01452 1.1e-146 iunH 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
ABFBJKDB_01453 3.1e-54 cps3I G Acyltransferase family
ABFBJKDB_01454 3.6e-14
ABFBJKDB_01455 1.1e-129 S Bacterial membrane protein YfhO
ABFBJKDB_01456 1.2e-06 XK27_08315 M Sulfatase
ABFBJKDB_01458 1.3e-59 arsC 1.20.4.1 T Low molecular weight phosphatase family
ABFBJKDB_01459 2.7e-171 rpsA 1.17.7.4 J Ribosomal protein S1
ABFBJKDB_01460 4.5e-228 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
ABFBJKDB_01461 8.5e-36 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
ABFBJKDB_01463 3.7e-23 K Acetyltransferase (GNAT) domain
ABFBJKDB_01464 8.1e-112 natA S Domain of unknown function (DUF4162)
ABFBJKDB_01465 6.7e-85 natB CP ABC-type Na efflux pump, permease component
ABFBJKDB_01466 1.8e-95 EG EamA-like transporter family
ABFBJKDB_01467 7e-81 yjjH S Calcineurin-like phosphoesterase
ABFBJKDB_01468 8.3e-187 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
ABFBJKDB_01469 5.5e-40 6.3.3.2 S ASCH
ABFBJKDB_01470 3e-70 lepB 3.4.21.89 U Signal peptidase, peptidase S26
ABFBJKDB_01471 1.8e-116 degV S EDD domain protein, DegV family
ABFBJKDB_01472 8.9e-40 K Transcriptional regulator
ABFBJKDB_01473 5.9e-204 FbpA K Fibronectin-binding protein
ABFBJKDB_01475 2.4e-47 S Short repeat of unknown function (DUF308)
ABFBJKDB_01476 4.7e-53 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
ABFBJKDB_01477 7.5e-83 L COG1961 Site-specific recombinases, DNA invertase Pin homologs
ABFBJKDB_01478 1.1e-71 S Recombinase
ABFBJKDB_01479 7.9e-296 L Recombinase
ABFBJKDB_01480 1.6e-32 K Cro/C1-type HTH DNA-binding domain
ABFBJKDB_01481 3.1e-164 L Nucleotidyltransferase domain
ABFBJKDB_01482 6.8e-141 Q Protein of unknown function (DUF1698)
ABFBJKDB_01483 3.8e-167 aadK G adenylyltransferase
ABFBJKDB_01484 8.5e-93 apt 2.4.2.7 F purine ribonucleoside salvage
ABFBJKDB_01485 1.7e-251 L Transposase DDE domain group 1
ABFBJKDB_01486 6.2e-163 oxlT P Major Facilitator Superfamily
ABFBJKDB_01487 4.5e-67 ybbL S ABC transporter
ABFBJKDB_01488 1.9e-101 ybbM S Uncharacterised protein family (UPF0014)
ABFBJKDB_01489 3e-41 ytcD K HxlR-like helix-turn-helix
ABFBJKDB_01490 8.4e-119 ytbE S reductase
ABFBJKDB_01491 3.5e-69 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
ABFBJKDB_01492 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ABFBJKDB_01493 1e-187 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
ABFBJKDB_01494 1.6e-121 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
ABFBJKDB_01495 7.5e-13
ABFBJKDB_01496 8e-147 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ABFBJKDB_01497 3.2e-66 yrjD S LUD domain
ABFBJKDB_01498 1.1e-244 lutB C 4Fe-4S dicluster domain
ABFBJKDB_01499 2e-116 lutA C Cysteine-rich domain
ABFBJKDB_01500 2e-208 yfnA E Amino Acid
ABFBJKDB_01502 4.3e-61 uspA T universal stress protein
ABFBJKDB_01504 1.8e-61 yvdD 3.2.2.10 S Possible lysine decarboxylase
ABFBJKDB_01505 3.1e-72 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
ABFBJKDB_01507 8e-64 srtA 3.4.22.70 M sortase family
ABFBJKDB_01508 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
ABFBJKDB_01509 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
ABFBJKDB_01510 9.6e-35
ABFBJKDB_01511 1.8e-141 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABFBJKDB_01512 1.7e-155 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
ABFBJKDB_01513 6.6e-97 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
ABFBJKDB_01514 7.8e-49 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain (presumed)
ABFBJKDB_01515 3.5e-22 S Cytochrome B5
ABFBJKDB_01516 5.2e-19 sigH K DNA-templated transcription, initiation
ABFBJKDB_01517 3.4e-69 recX 2.4.1.337 GT4 S Regulatory protein RecX
ABFBJKDB_01518 6.5e-193 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ABFBJKDB_01519 2.6e-97 ygaC J Belongs to the UPF0374 family
ABFBJKDB_01520 2.4e-92 yueF S AI-2E family transporter
ABFBJKDB_01521 6.5e-158 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
ABFBJKDB_01522 1.8e-108 3.6.3.38, 3.6.3.40 GM Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
ABFBJKDB_01523 4e-279 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
ABFBJKDB_01524 0.0 lacL 3.2.1.23 G -beta-galactosidase
ABFBJKDB_01525 1.4e-41 2.7.7.65 T GGDEF domain
ABFBJKDB_01527 1.5e-62 K helix_turn_helix, arabinose operon control protein
ABFBJKDB_01528 5.6e-44
ABFBJKDB_01529 5.8e-205 pipD E Dipeptidase
ABFBJKDB_01530 1.1e-23 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
ABFBJKDB_01531 1.4e-189 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
ABFBJKDB_01532 8.6e-61 speG J Acetyltransferase (GNAT) domain
ABFBJKDB_01533 8.7e-113 yitU 3.1.3.104 S hydrolase
ABFBJKDB_01534 6.4e-81 yjfP S COG1073 Hydrolases of the alpha beta superfamily
ABFBJKDB_01535 4.8e-81
ABFBJKDB_01536 1.4e-179 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
ABFBJKDB_01537 8.7e-42 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
ABFBJKDB_01538 2.4e-157 manA 5.3.1.8 G mannose-6-phosphate isomerase
ABFBJKDB_01539 1.1e-39 ybjQ S Belongs to the UPF0145 family
ABFBJKDB_01540 8.2e-07
ABFBJKDB_01541 3e-95 V ABC transporter, ATP-binding protein
ABFBJKDB_01542 1.1e-41 gntR1 K Transcriptional regulator, GntR family
ABFBJKDB_01543 1.7e-186 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
ABFBJKDB_01544 2.8e-65 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
ABFBJKDB_01545 3.2e-261 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
ABFBJKDB_01546 2.2e-107 terC P Integral membrane protein TerC family
ABFBJKDB_01547 1.6e-38 K Transcriptional regulator
ABFBJKDB_01548 9.8e-96 tcyA ET Belongs to the bacterial solute-binding protein 3 family
ABFBJKDB_01549 6e-100 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
ABFBJKDB_01550 4.5e-102 tcyB E ABC transporter
ABFBJKDB_01552 2e-93 M Exporter of polyketide antibiotics
ABFBJKDB_01553 9.5e-48 M Exporter of polyketide antibiotics
ABFBJKDB_01554 5.2e-100 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
ABFBJKDB_01555 4.9e-45 S Repeat protein
ABFBJKDB_01556 2.8e-279 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
ABFBJKDB_01560 1e-86 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABFBJKDB_01561 2.1e-67 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
ABFBJKDB_01562 6.9e-43 yodB K Transcriptional regulator, HxlR family
ABFBJKDB_01563 7.4e-173 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
ABFBJKDB_01564 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
ABFBJKDB_01565 1.8e-127 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ABFBJKDB_01566 1.8e-97 udk 2.7.1.48 F Cytidine monophosphokinase
ABFBJKDB_01567 1.7e-68 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
ABFBJKDB_01568 6.4e-12
ABFBJKDB_01569 3.9e-144 iunH2 3.2.2.1 F nucleoside hydrolase
ABFBJKDB_01570 1.7e-42 XK27_03960 S Protein of unknown function (DUF3013)
ABFBJKDB_01571 2.2e-117 prmA J Ribosomal protein L11 methyltransferase
ABFBJKDB_01572 4.8e-78 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
ABFBJKDB_01573 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABFBJKDB_01574 2.3e-54 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
ABFBJKDB_01575 3e-57 3.1.3.18 J HAD-hyrolase-like
ABFBJKDB_01576 3.4e-42 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
ABFBJKDB_01577 1.4e-127 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
ABFBJKDB_01578 1.3e-75 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
ABFBJKDB_01579 3.5e-204 pyrP F Permease
ABFBJKDB_01580 7.4e-115 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
ABFBJKDB_01581 1.1e-190 carB 6.3.5.5 F Carbamoyl-phosphate synthase
ABFBJKDB_01582 2.3e-85 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
ABFBJKDB_01583 2e-88 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
ABFBJKDB_01584 3.7e-134 K Transcriptional regulator
ABFBJKDB_01585 8.3e-144 ppaC 3.6.1.1 C inorganic pyrophosphatase
ABFBJKDB_01586 1.1e-114 glcR K DeoR C terminal sensor domain
ABFBJKDB_01587 4.5e-171 patA 2.6.1.1 E Aminotransferase
ABFBJKDB_01588 9.2e-88 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
ABFBJKDB_01590 1.1e-35 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
ABFBJKDB_01591 6.1e-173 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
ABFBJKDB_01592 3.1e-36 rnhA 3.1.26.4 L Ribonuclease HI
ABFBJKDB_01593 1.5e-22 S Family of unknown function (DUF5322)
ABFBJKDB_01594 3.8e-256 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
ABFBJKDB_01595 1.8e-38
ABFBJKDB_01597 1.1e-149 EGP Sugar (and other) transporter
ABFBJKDB_01598 6e-78 trmK 2.1.1.217 S SAM-dependent methyltransferase
ABFBJKDB_01599 6.3e-103 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ABFBJKDB_01600 6.5e-184 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
ABFBJKDB_01601 1.6e-66 alkD L DNA alkylation repair enzyme
ABFBJKDB_01602 3.8e-136 EG EamA-like transporter family
ABFBJKDB_01603 3.6e-150 S Tetratricopeptide repeat protein
ABFBJKDB_01604 3.4e-204 hisS 6.1.1.21 J histidyl-tRNA synthetase
ABFBJKDB_01605 8.7e-299 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
ABFBJKDB_01606 5.4e-127 corA P CorA-like Mg2+ transporter protein
ABFBJKDB_01607 8.5e-161 nhaC C Na H antiporter NhaC
ABFBJKDB_01608 1.5e-130 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
ABFBJKDB_01609 5.8e-81 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
ABFBJKDB_01611 2.5e-92 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ABFBJKDB_01612 5.1e-159 iscS 2.8.1.7 E Aminotransferase class V
ABFBJKDB_01613 3.7e-41 XK27_04120 S Putative amino acid metabolism
ABFBJKDB_01614 4.3e-203 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
ABFBJKDB_01615 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
ABFBJKDB_01616 4.3e-15 S Protein of unknown function (DUF2929)
ABFBJKDB_01617 0.0 dnaE 2.7.7.7 L DNA polymerase
ABFBJKDB_01618 1.9e-167 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
ABFBJKDB_01619 3.7e-310 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
ABFBJKDB_01620 3.6e-190 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
ABFBJKDB_01621 5.5e-243 lysP E amino acid
ABFBJKDB_01622 3.1e-69 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
ABFBJKDB_01623 8.6e-272 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
ABFBJKDB_01624 1.2e-13 2.3.1.128 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ABFBJKDB_01625 3.2e-57 lssY 3.6.1.27 I phosphatidate phosphatase activity
ABFBJKDB_01626 7.6e-83 lysR5 K LysR substrate binding domain
ABFBJKDB_01627 3.8e-119 yxaA S membrane transporter protein
ABFBJKDB_01628 2.6e-32 ywjH S Protein of unknown function (DUF1634)
ABFBJKDB_01629 7e-126 brpA K Cell envelope-like function transcriptional attenuator common domain protein
ABFBJKDB_01631 2.1e-21 XK27_09445 S Domain of unknown function (DUF1827)
ABFBJKDB_01632 1.7e-105 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G MucBP domain
ABFBJKDB_01633 3e-311 rafA 3.2.1.22 G alpha-galactosidase
ABFBJKDB_01634 5.9e-200 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
ABFBJKDB_01635 2.3e-163 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
ABFBJKDB_01636 4.5e-179 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
ABFBJKDB_01637 5.9e-111 galR K Transcriptional regulator
ABFBJKDB_01638 8.9e-289 lacS G Transporter
ABFBJKDB_01639 6.9e-134 glpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
ABFBJKDB_01640 1.5e-80 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
ABFBJKDB_01641 2.5e-140 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
ABFBJKDB_01642 6.1e-172 oppA2 E Bacterial extracellular solute-binding proteins, family 5 Middle
ABFBJKDB_01643 3.8e-161 adhB 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
ABFBJKDB_01644 1.6e-196 metY 2.5.1.49 E Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
ABFBJKDB_01645 1.2e-72 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
ABFBJKDB_01646 4.9e-130 yxjG 2.1.1.14 E Cobalamin-independent synthase, Catalytic domain
ABFBJKDB_01647 3.4e-83 lytH 3.5.1.28 M Ami_3
ABFBJKDB_01648 3.5e-153 phoH T phosphate starvation-inducible protein PhoH
ABFBJKDB_01649 3e-60 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
ABFBJKDB_01650 1.1e-29 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
ABFBJKDB_01651 1e-154 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ABFBJKDB_01652 1.5e-90 recO L Involved in DNA repair and RecF pathway recombination
ABFBJKDB_01653 2.6e-07 dltX S D-Ala-teichoic acid biosynthesis protein
ABFBJKDB_01654 2e-219 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
ABFBJKDB_01655 1.2e-174 dltB M MBOAT, membrane-bound O-acyltransferase family
ABFBJKDB_01656 1.4e-28 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
ABFBJKDB_01657 1.5e-151 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
ABFBJKDB_01658 1.3e-65 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
ABFBJKDB_01659 4.7e-56 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
ABFBJKDB_01660 5.8e-156 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
ABFBJKDB_01661 2.2e-276 yfmR S ABC transporter, ATP-binding protein
ABFBJKDB_01662 1.1e-132 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
ABFBJKDB_01663 1.1e-107 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
ABFBJKDB_01664 1e-106 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
ABFBJKDB_01665 3.9e-68 xerD L Phage integrase, N-terminal SAM-like domain
ABFBJKDB_01667 1.8e-56 yqeY S YqeY-like protein
ABFBJKDB_01668 4.7e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
ABFBJKDB_01669 1.1e-115 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
ABFBJKDB_01670 1.8e-208 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
ABFBJKDB_01671 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ABFBJKDB_01674 7e-152 V Pfam:Methyltransf_26
ABFBJKDB_01675 7.5e-225 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
ABFBJKDB_01676 1.9e-49 L Probable transposase
ABFBJKDB_01677 1.2e-21 rapL 4.3.1.12 E Ornithine cyclodeaminase/mu-crystallin family
ABFBJKDB_01678 1.2e-78 rapL 4.3.1.12 E Ornithine cyclodeaminase/mu-crystallin family
ABFBJKDB_01679 0.0 S Bacterial membrane protein YfhO
ABFBJKDB_01680 5.1e-53 gtcA S Teichoic acid glycosylation protein
ABFBJKDB_01681 5.1e-54 fld C Flavodoxin
ABFBJKDB_01682 1.2e-143 map 3.4.11.18 E Methionine Aminopeptidase
ABFBJKDB_01683 1.2e-152 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
ABFBJKDB_01684 4.7e-12 mltD CBM50 M Lysin motif
ABFBJKDB_01685 3.8e-93 yihY S Belongs to the UPF0761 family
ABFBJKDB_01687 3.2e-181 pbuG S permease
ABFBJKDB_01688 6.4e-65 S Uncharacterized protein conserved in bacteria (DUF2263)
ABFBJKDB_01689 9e-179 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
ABFBJKDB_01690 3.4e-208 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
ABFBJKDB_01691 1.6e-30 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
ABFBJKDB_01692 8.2e-146 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ABFBJKDB_01693 5.4e-13
ABFBJKDB_01694 3.4e-48 ndoA L Toxic component of a toxin-antitoxin (TA) module
ABFBJKDB_01695 3.2e-82 ybhF_2 V AAA domain, putative AbiEii toxin, Type IV TA system
ABFBJKDB_01696 2e-104 ybhR V ABC transporter
ABFBJKDB_01697 2.3e-31 K Transcriptional regulator
ABFBJKDB_01698 1.6e-42 VPA1512 ET Bacterial extracellular solute-binding proteins, family 3
ABFBJKDB_01699 5.1e-152 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
ABFBJKDB_01700 5.6e-127
ABFBJKDB_01701 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABFBJKDB_01702 1.3e-167 arlS 2.7.13.3 T Histidine kinase
ABFBJKDB_01703 3.1e-111 K response regulator
ABFBJKDB_01705 1.7e-107 pacA 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
ABFBJKDB_01706 1.2e-225 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ABFBJKDB_01707 3.8e-159 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ABFBJKDB_01708 4.1e-57 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
ABFBJKDB_01709 3.4e-92 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
ABFBJKDB_01710 2.2e-249 dinG 3.1.12.1, 3.6.4.12 KL DEAD_2
ABFBJKDB_01711 2.2e-61
ABFBJKDB_01712 1.4e-40 rpmE2 J Ribosomal protein L31
ABFBJKDB_01713 1.5e-188 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
ABFBJKDB_01714 1e-200 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ABFBJKDB_01717 1.2e-288 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
ABFBJKDB_01718 2.9e-41 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
ABFBJKDB_01719 1.8e-32 ywiB S Domain of unknown function (DUF1934)
ABFBJKDB_01720 2e-159 L transposase, IS605 OrfB family
ABFBJKDB_01721 9.5e-58 tlpA2 L Transposase IS200 like
ABFBJKDB_01722 1.3e-85 yfeJ 6.3.5.2 F glutamine amidotransferase
ABFBJKDB_01723 3.3e-205 ywfO S HD domain protein
ABFBJKDB_01724 5.8e-88 S hydrolase
ABFBJKDB_01725 1.2e-70 ydcZ S Putative inner membrane exporter, YdcZ
ABFBJKDB_01726 2.8e-22
ABFBJKDB_01727 4.1e-73
ABFBJKDB_01728 1.4e-70 L recombinase activity
ABFBJKDB_01729 9.7e-78 2.1.1.72 LV Eco57I restriction-modification methylase
ABFBJKDB_01730 7.3e-28 L DNA restriction-modification system
ABFBJKDB_01731 0.0 2.1.1.72 LV Eco57I restriction-modification methylase
ABFBJKDB_01732 0.0 L SNF2 family N-terminal domain
ABFBJKDB_01734 4.1e-39 L COGs COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
ABFBJKDB_01735 1.3e-22
ABFBJKDB_01736 6e-57 spoVK O ATPase family associated with various cellular activities (AAA)
ABFBJKDB_01738 1.1e-85 S overlaps another CDS with the same product name
ABFBJKDB_01739 3e-124 S overlaps another CDS with the same product name
ABFBJKDB_01740 1e-99 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
ABFBJKDB_01741 1.5e-62 bCE_4747 S Beta-lactamase superfamily domain
ABFBJKDB_01742 1.4e-290 ybiT S ABC transporter, ATP-binding protein
ABFBJKDB_01743 1e-78 2.4.2.3 F Phosphorylase superfamily
ABFBJKDB_01744 1.3e-24
ABFBJKDB_01745 2.9e-111 dkg S reductase
ABFBJKDB_01747 1.5e-20 rimL 1.1.1.25 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ABFBJKDB_01748 2.3e-168 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABFBJKDB_01749 5.1e-193 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
ABFBJKDB_01750 5.6e-47 EGP Transmembrane secretion effector
ABFBJKDB_01751 5.2e-137 purR 2.4.2.7 F pur operon repressor
ABFBJKDB_01752 2.5e-44 adhR K helix_turn_helix, mercury resistance
ABFBJKDB_01753 3.9e-185 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
ABFBJKDB_01755 1.2e-103 pfoS S Phosphotransferase system, EIIC
ABFBJKDB_01756 2.9e-126 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ABFBJKDB_01757 2.9e-149 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
ABFBJKDB_01758 3.2e-196 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
ABFBJKDB_01759 1.1e-200 argH 4.3.2.1 E argininosuccinate lyase
ABFBJKDB_01760 3e-155 amtB P ammonium transporter
ABFBJKDB_01761 9e-116 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
ABFBJKDB_01762 2.8e-47 argR K Regulates arginine biosynthesis genes
ABFBJKDB_01763 1.7e-138 arcT 2.6.1.1 E Cys/Met metabolism PLP-dependent enzyme
ABFBJKDB_01764 8e-90 S Alpha/beta hydrolase of unknown function (DUF915)
ABFBJKDB_01765 1.2e-22 veg S Biofilm formation stimulator VEG
ABFBJKDB_01766 7e-132 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
ABFBJKDB_01767 3.4e-87 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
ABFBJKDB_01768 9.2e-104 tatD L hydrolase, TatD family
ABFBJKDB_01769 4.9e-97 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ABFBJKDB_01770 4.7e-133 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
ABFBJKDB_01771 3.6e-24 yozE S Belongs to the UPF0346 family
ABFBJKDB_01772 5.7e-53 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
ABFBJKDB_01773 6.5e-80 ypmR E GDSL-like Lipase/Acylhydrolase
ABFBJKDB_01775 1.8e-106 S Aldo keto reductase
ABFBJKDB_01776 4.2e-35 K helix_turn_helix, mercury resistance
ABFBJKDB_01777 1.6e-133 yvgN C Aldo keto reductase
ABFBJKDB_01779 2.2e-39 ypaA S Protein of unknown function (DUF1304)
ABFBJKDB_01780 3.2e-83 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
ABFBJKDB_01781 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
ABFBJKDB_01782 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
ABFBJKDB_01783 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
ABFBJKDB_01784 6.8e-26 ykuJ S Protein of unknown function (DUF1797)
ABFBJKDB_01785 1.7e-129 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
ABFBJKDB_01786 1e-126 cpoA GT4 M Glycosyltransferase, group 1 family protein
ABFBJKDB_01787 1.1e-161 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
ABFBJKDB_01791 1.1e-118 repE K Primase C terminal 1 (PriCT-1)
ABFBJKDB_01792 1.1e-27 K Helix-turn-helix XRE-family like proteins
ABFBJKDB_01793 9.5e-136 pfoS S Phosphotransferase system, EIIC
ABFBJKDB_01794 9.3e-117 ldhA 1.1.1.28 CH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
ABFBJKDB_01795 2e-32 dprA LU DNA protecting protein DprA
ABFBJKDB_01796 1.8e-82 L Transposase, IS116 IS110 IS902 family
ABFBJKDB_01797 1.4e-51
ABFBJKDB_01798 9.7e-25 infB UW LPXTG-motif cell wall anchor domain protein
ABFBJKDB_01800 5.6e-192 lacI K lacI family
ABFBJKDB_01801 5.4e-59 tetA EGP Major facilitator Superfamily
ABFBJKDB_01802 2.9e-63 mbeC S Psort location Cytoplasmic, score
ABFBJKDB_01803 2.7e-160 penP 3.5.2.6 V Beta-lactamase
ABFBJKDB_01805 6.4e-176 yjcE P Sodium proton antiporter
ABFBJKDB_01806 3.4e-209 mtlR K Mga helix-turn-helix domain
ABFBJKDB_01807 7.8e-303 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
ABFBJKDB_01808 1.3e-231 pepF E oligoendopeptidase F
ABFBJKDB_01809 1.2e-67 coiA 3.6.4.12 S Competence protein
ABFBJKDB_01810 9.2e-48 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
ABFBJKDB_01811 8.2e-219 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
ABFBJKDB_01813 2.2e-12 tetR K Transcriptional regulator C-terminal region
ABFBJKDB_01814 4.2e-151 yfeX P Peroxidase
ABFBJKDB_01815 1e-17 S Protein of unknown function (DUF3021)
ABFBJKDB_01816 5.3e-40 K LytTr DNA-binding domain
ABFBJKDB_01817 6.9e-114 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
ABFBJKDB_01818 5.4e-208 mmuP E amino acid
ABFBJKDB_01819 9.2e-16 psiE S Phosphate-starvation-inducible E
ABFBJKDB_01820 1.7e-117 M Core-2/I-Branching enzyme
ABFBJKDB_01821 2.1e-194 glf 5.4.99.9 M UDP-galactopyranose mutase
ABFBJKDB_01822 2.9e-188 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
ABFBJKDB_01823 6.1e-58 S peptidoglycan catabolic process
ABFBJKDB_01824 1.7e-193 XK27_08315 M Sulfatase
ABFBJKDB_01826 8.4e-168 mdtG EGP Major facilitator Superfamily
ABFBJKDB_01827 1.1e-250 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
ABFBJKDB_01828 9.8e-84 treR K UTRA
ABFBJKDB_01829 9.5e-259 treB G phosphotransferase system
ABFBJKDB_01830 4.6e-63 3.1.3.73 G phosphoglycerate mutase
ABFBJKDB_01831 2.4e-82 pncA Q isochorismatase
ABFBJKDB_01832 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
ABFBJKDB_01833 2.9e-102 ydhQ K UbiC transcription regulator-associated domain protein
ABFBJKDB_01834 2.5e-170 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
ABFBJKDB_01835 4e-33 K Transcriptional regulator, HxlR family
ABFBJKDB_01836 2e-206 L Probable transposase
ABFBJKDB_01837 7.3e-94 C Luciferase-like monooxygenase
ABFBJKDB_01838 1.5e-62 1.5.1.38 S NADPH-dependent FMN reductase
ABFBJKDB_01839 1.5e-117 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
ABFBJKDB_01840 3.9e-76 L haloacid dehalogenase-like hydrolase
ABFBJKDB_01841 3.1e-61 EG EamA-like transporter family
ABFBJKDB_01842 1.2e-117 K AI-2E family transporter
ABFBJKDB_01843 1.1e-172 malY 4.4.1.8 E Aminotransferase, class I
ABFBJKDB_01844 2.1e-123 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
ABFBJKDB_01846 4e-16
ABFBJKDB_01847 6.1e-103 V domain protein
ABFBJKDB_01848 8.3e-119 xth 3.1.11.2 L exodeoxyribonuclease III
ABFBJKDB_01849 2e-17
ABFBJKDB_01850 1.9e-104 azlC E AzlC protein
ABFBJKDB_01851 1.3e-38 azlD S branched-chain amino acid
ABFBJKDB_01852 1.1e-65 I alpha/beta hydrolase fold
ABFBJKDB_01853 2.8e-26
ABFBJKDB_01854 2.8e-58 3.6.1.27 I phosphatase
ABFBJKDB_01855 1.6e-22
ABFBJKDB_01856 4.5e-94 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
ABFBJKDB_01857 6.3e-90 sirR K Helix-turn-helix diphteria tox regulatory element
ABFBJKDB_01858 3.1e-27 cspC K Cold shock protein
ABFBJKDB_01859 4.3e-82 thrE S Putative threonine/serine exporter
ABFBJKDB_01860 6.3e-49 S Threonine/Serine exporter, ThrE
ABFBJKDB_01861 1.2e-120 brpA K Cell envelope-like function transcriptional attenuator common domain protein
ABFBJKDB_01862 1.6e-85 S Sucrose-6F-phosphate phosphohydrolase
ABFBJKDB_01863 1.9e-34 trxA O Belongs to the thioredoxin family
ABFBJKDB_01864 9.4e-22 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
ABFBJKDB_01865 2e-21 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
ABFBJKDB_01866 3.3e-65 degV S Uncharacterised protein, DegV family COG1307
ABFBJKDB_01868 4.3e-54 queT S QueT transporter
ABFBJKDB_01869 3.9e-34 XK27_01315 S Protein of unknown function (DUF2829)
ABFBJKDB_01870 1.2e-100 IQ Enoyl-(Acyl carrier protein) reductase
ABFBJKDB_01871 1e-111 argE 3.5.1.18 E Peptidase dimerisation domain
ABFBJKDB_01872 1.9e-174 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
ABFBJKDB_01873 1.6e-94 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
ABFBJKDB_01874 5e-87 S Alpha beta hydrolase
ABFBJKDB_01875 1.2e-43 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
ABFBJKDB_01876 3.6e-140 V MatE
ABFBJKDB_01877 1.4e-156 gmuE 2.7.1.2, 2.7.1.4 GK ROK family
ABFBJKDB_01878 2e-64 bacG M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABFBJKDB_01879 4.3e-97 V ABC transporter
ABFBJKDB_01880 9.6e-132 bacI V MacB-like periplasmic core domain
ABFBJKDB_01881 9e-74 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
ABFBJKDB_01882 1.7e-26
ABFBJKDB_01883 2.1e-180 yhdP S Transporter associated domain
ABFBJKDB_01884 6e-79 ptp2 3.1.3.48 T Tyrosine phosphatase family
ABFBJKDB_01885 0.0 L Helicase C-terminal domain protein
ABFBJKDB_01886 9.6e-251 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
ABFBJKDB_01887 6.9e-285 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ABFBJKDB_01888 9.7e-37 ptsH G phosphocarrier protein HPR
ABFBJKDB_01889 1.5e-15
ABFBJKDB_01890 0.0 clpE O Belongs to the ClpA ClpB family
ABFBJKDB_01891 1.1e-96 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
ABFBJKDB_01892 4.4e-105 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
ABFBJKDB_01893 5e-157 ndh 1.6.99.3 C NADH dehydrogenase
ABFBJKDB_01894 8e-145 pbuO_1 S Permease family
ABFBJKDB_01895 1.1e-117 ksgA 2.1.1.182, 2.1.1.184 J Ribosomal RNA adenine dimethylases
ABFBJKDB_01896 1.5e-81 S Plasmid replication protein
ABFBJKDB_01898 3.4e-21 pre D Plasmid recombination enzyme
ABFBJKDB_01899 9.3e-168 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
ABFBJKDB_01900 6.2e-210 glnP P ABC transporter
ABFBJKDB_01902 6.4e-42
ABFBJKDB_01903 4.8e-43 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
ABFBJKDB_01904 1.7e-156 nrnB S DHHA1 domain
ABFBJKDB_01905 3.7e-90 yunF F Protein of unknown function DUF72
ABFBJKDB_01907 7.6e-125 D CobQ CobB MinD ParA nucleotide binding domain protein
ABFBJKDB_01908 1.7e-63 licT K transcriptional antiterminator
ABFBJKDB_01909 1.4e-28 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
ABFBJKDB_01910 5.2e-187 nox S Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
ABFBJKDB_01911 4.9e-204 G PTS system Galactitol-specific IIC component
ABFBJKDB_01913 2.1e-153 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
ABFBJKDB_01914 1.7e-147 scrR K helix_turn _helix lactose operon repressor
ABFBJKDB_01915 3.5e-216 scrB 3.2.1.26 GH32 G invertase
ABFBJKDB_01916 1e-281 scrA 2.7.1.211, 5.3.1.1 G phosphotransferase system
ABFBJKDB_01917 5.3e-184 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
ABFBJKDB_01918 1.2e-114 ntpJ P Potassium uptake protein
ABFBJKDB_01919 2.8e-58 ktrA P TrkA-N domain
ABFBJKDB_01920 7.4e-54 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
ABFBJKDB_01921 4.4e-37 M Glycosyltransferase group 2 family protein
ABFBJKDB_01922 1.4e-19
ABFBJKDB_01923 1.4e-94 S Predicted membrane protein (DUF2207)
ABFBJKDB_01924 2.1e-54 bioY S BioY family
ABFBJKDB_01925 1.3e-183 lmrB EGP Major facilitator Superfamily
ABFBJKDB_01926 1.7e-94 dacA 3.4.16.4 M Belongs to the peptidase S11 family
ABFBJKDB_01927 7.6e-74 glcR K DeoR C terminal sensor domain
ABFBJKDB_01928 1.3e-60 yceE S haloacid dehalogenase-like hydrolase
ABFBJKDB_01929 4.3e-41 S CAAX protease self-immunity
ABFBJKDB_01930 7e-34 S Domain of unknown function (DUF4811)
ABFBJKDB_01931 2.1e-197 lmrB EGP Major facilitator Superfamily
ABFBJKDB_01932 1.9e-32 merR K MerR HTH family regulatory protein
ABFBJKDB_01933 1e-39 yaeR E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
ABFBJKDB_01934 9.1e-71 S Protein of unknown function (DUF554)
ABFBJKDB_01935 1.8e-120 G Bacterial extracellular solute-binding protein
ABFBJKDB_01936 3.9e-79 baeR K Bacterial regulatory proteins, luxR family
ABFBJKDB_01937 5.1e-99 baeS T Histidine kinase
ABFBJKDB_01938 4.1e-80 rbsB G sugar-binding domain protein
ABFBJKDB_01939 9e-152 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
ABFBJKDB_01940 6.4e-116 manY G PTS system sorbose-specific iic component
ABFBJKDB_01941 2.1e-147 manN G system, mannose fructose sorbose family IID component
ABFBJKDB_01942 1.8e-52 manO S Domain of unknown function (DUF956)
ABFBJKDB_01943 3.5e-70 mltD CBM50 M NlpC P60 family protein
ABFBJKDB_01944 1.1e-129 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
ABFBJKDB_01945 2.4e-164 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ABFBJKDB_01946 4.1e-75 ung2 3.2.2.27 L Uracil-DNA glycosylase
ABFBJKDB_01947 1e-47 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
ABFBJKDB_01948 8.1e-38 K transcriptional regulator PadR family
ABFBJKDB_01949 3.2e-19 XK27_06920 S Protein of unknown function (DUF1700)
ABFBJKDB_01950 3.1e-16 S Putative adhesin
ABFBJKDB_01951 2.2e-16 pspC KT PspC domain
ABFBJKDB_01952 3.9e-13 S Enterocin A Immunity
ABFBJKDB_01953 1.5e-235 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
ABFBJKDB_01954 1.6e-260 glpD 1.1.3.21, 1.1.5.3 C C-terminal domain of alpha-glycerophosphate oxidase
ABFBJKDB_01955 7.4e-100 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
ABFBJKDB_01956 8.2e-167 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
ABFBJKDB_01957 9.5e-120 potB P ABC transporter permease
ABFBJKDB_01958 1.3e-103 potC U Binding-protein-dependent transport system inner membrane component
ABFBJKDB_01959 1.1e-158 potD P ABC transporter
ABFBJKDB_01960 7.8e-132 ABC-SBP S ABC transporter
ABFBJKDB_01961 4.3e-113 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
ABFBJKDB_01962 1e-107 XK27_08845 S ABC transporter, ATP-binding protein
ABFBJKDB_01963 7.4e-67 M ErfK YbiS YcfS YnhG
ABFBJKDB_01964 4.1e-54 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
ABFBJKDB_01965 1.4e-224 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
ABFBJKDB_01966 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
ABFBJKDB_01967 1.2e-102 pgm3 G phosphoglycerate mutase
ABFBJKDB_01968 3.6e-56 S CAAX protease self-immunity
ABFBJKDB_01969 2.4e-46 C Flavodoxin
ABFBJKDB_01970 1.1e-55 yphH S Cupin domain
ABFBJKDB_01971 1.4e-45 yphJ 4.1.1.44 S decarboxylase
ABFBJKDB_01972 1.1e-59 L Probable transposase
ABFBJKDB_01979 5.1e-08
ABFBJKDB_01985 1.4e-06
ABFBJKDB_01986 8.8e-263 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
ABFBJKDB_01987 1.7e-54 rplI J Binds to the 23S rRNA
ABFBJKDB_01988 6.7e-206 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
ABFBJKDB_01989 4e-64 C FMN binding
ABFBJKDB_01990 2.8e-230 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ABFBJKDB_01992 5.1e-157 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
ABFBJKDB_01993 1.2e-59 ykhA 3.1.2.20 I Thioesterase superfamily
ABFBJKDB_01994 7.9e-12 S CAAX protease self-immunity
ABFBJKDB_01995 9.5e-82 S Belongs to the UPF0246 family
ABFBJKDB_01996 3.7e-31 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
ABFBJKDB_01997 1.7e-60 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
ABFBJKDB_01998 1e-143 2.1.1.14 E methionine synthase, vitamin-B12 independent
ABFBJKDB_01999 7.4e-107 metQ1 P Belongs to the nlpA lipoprotein family
ABFBJKDB_02000 1.5e-149 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ABFBJKDB_02001 9.6e-68 metI P ABC transporter permease
ABFBJKDB_02002 8.8e-135 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
ABFBJKDB_02003 3e-84 drgA C nitroreductase
ABFBJKDB_02004 3.9e-84 adc 4.1.1.4 Q Acetoacetate decarboxylase (ADC)
ABFBJKDB_02005 2.3e-106 fadB4 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
ABFBJKDB_02006 1.3e-172 npr 1.11.1.1 S Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
ABFBJKDB_02007 3.3e-265 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
ABFBJKDB_02009 2.1e-151 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ABFBJKDB_02010 2.4e-31 metI U ABC transporter permease
ABFBJKDB_02011 2.5e-128 metQ M Belongs to the nlpA lipoprotein family
ABFBJKDB_02012 2.3e-34 S Protein of unknown function (DUF4256)
ABFBJKDB_02015 4.7e-178 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
ABFBJKDB_02016 2.8e-166 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
ABFBJKDB_02017 1.4e-178 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
ABFBJKDB_02018 4e-230 lpdA 1.8.1.4 C Dehydrogenase
ABFBJKDB_02019 7.3e-149 lplA 6.3.1.20 H Lipoate-protein ligase
ABFBJKDB_02020 9.2e-56 S Protein of unknown function (DUF975)
ABFBJKDB_02021 1.1e-76 E GDSL-like Lipase/Acylhydrolase family
ABFBJKDB_02022 2.3e-38
ABFBJKDB_02023 4.1e-27 gcvR T Belongs to the UPF0237 family
ABFBJKDB_02024 6.7e-219 XK27_08635 S UPF0210 protein
ABFBJKDB_02025 9e-88 fruR K DeoR C terminal sensor domain
ABFBJKDB_02026 4.1e-151 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
ABFBJKDB_02027 3.3e-283 fruA 2.7.1.202 GT Phosphotransferase System
ABFBJKDB_02028 1.6e-49 cps3F
ABFBJKDB_02029 2.1e-83 S Membrane
ABFBJKDB_02030 1.8e-254 E Amino acid permease
ABFBJKDB_02031 3.4e-226 cadA P P-type ATPase
ABFBJKDB_02032 6.4e-114 degV S EDD domain protein, DegV family
ABFBJKDB_02033 1.1e-148 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
ABFBJKDB_02034 5.6e-57 yfeJ 6.3.5.2 F glutamine amidotransferase
ABFBJKDB_02035 7.2e-27 ydiI Q Thioesterase superfamily
ABFBJKDB_02036 4.3e-144 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
ABFBJKDB_02037 1.9e-139 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
ABFBJKDB_02038 4.7e-81 S L,D-transpeptidase catalytic domain
ABFBJKDB_02039 7.4e-165 EGP Major facilitator Superfamily
ABFBJKDB_02040 1.4e-21 K helix_turn_helix multiple antibiotic resistance protein
ABFBJKDB_02041 1.7e-225 pipD E Dipeptidase
ABFBJKDB_02042 3.1e-101 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
ABFBJKDB_02043 2.5e-177 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
ABFBJKDB_02044 7.9e-123 xerC D Belongs to the 'phage' integrase family. XerC subfamily
ABFBJKDB_02045 7e-79 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
ABFBJKDB_02046 7.8e-218 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
ABFBJKDB_02047 3.5e-37 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
ABFBJKDB_02048 1.2e-58 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
ABFBJKDB_02049 1.1e-56 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ABFBJKDB_02050 5.8e-100 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
ABFBJKDB_02051 3.5e-58 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
ABFBJKDB_02052 4.1e-51 yeaL S Protein of unknown function (DUF441)
ABFBJKDB_02053 4.8e-125 cvfB S S1 domain
ABFBJKDB_02054 1.6e-112 xerD D recombinase XerD
ABFBJKDB_02055 8.4e-294 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
ABFBJKDB_02056 1.8e-76 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
ABFBJKDB_02057 3.1e-187 nhaC C Na H antiporter NhaC
ABFBJKDB_02058 3.5e-65 ypsA S Belongs to the UPF0398 family
ABFBJKDB_02059 9.3e-197 ade 3.5.4.2 F Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
ABFBJKDB_02061 9.1e-56 2.3.1.178 M GNAT acetyltransferase
ABFBJKDB_02062 1.9e-07 2.3.1.178 M phosphinothricin N-acetyltransferase activity
ABFBJKDB_02063 1.3e-68 maa 2.3.1.79 S Maltose acetyltransferase
ABFBJKDB_02064 5.7e-57 3.6.1.27 I Acid phosphatase homologues
ABFBJKDB_02065 8.7e-67
ABFBJKDB_02066 2.6e-28 K Transcriptional regulator
ABFBJKDB_02067 1.2e-14 hsdM 2.1.1.72 V type I restriction-modification system
ABFBJKDB_02068 2.7e-15 K Cro/C1-type HTH DNA-binding domain
ABFBJKDB_02069 0.0 L helicase superfamily c-terminal domain
ABFBJKDB_02070 8.2e-99 S Domain of unknown function (DUF4391)
ABFBJKDB_02071 8.8e-155 mod 2.1.1.72 L PFAM DNA methylase N-4 N-6 domain protein
ABFBJKDB_02075 4.9e-191 mod 2.1.1.72 L DNA methylase
ABFBJKDB_02076 0.0 res 3.1.21.5 L Type III restriction enzyme, res subunit
ABFBJKDB_02077 8.3e-15 E Zn peptidase
ABFBJKDB_02078 4.6e-75 E Zn peptidase
ABFBJKDB_02079 5.1e-81 XK27_07525 3.6.1.55 F Hydrolase, nudix family
ABFBJKDB_02081 1.3e-68 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
ABFBJKDB_02082 1.3e-109 pepE 3.4.13.21 E Alpha/beta hydrolase of unknown function (DUF915)
ABFBJKDB_02083 1.8e-167 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
ABFBJKDB_02084 1.6e-280 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
ABFBJKDB_02085 1.2e-213 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
ABFBJKDB_02086 2.8e-186 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
ABFBJKDB_02088 1.1e-38 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
ABFBJKDB_02089 1.7e-46 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
ABFBJKDB_02090 1.7e-44
ABFBJKDB_02091 2.4e-120 ica2 GT2 M Glycosyl transferase family group 2
ABFBJKDB_02092 1.3e-44 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
ABFBJKDB_02093 3.8e-221 mntH P H( )-stimulated, divalent metal cation uptake system
ABFBJKDB_02094 1.4e-59 ypbB 5.1.3.1 S Helix-turn-helix domain
ABFBJKDB_02095 5e-127 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
ABFBJKDB_02096 7.7e-12 M Lysin motif
ABFBJKDB_02097 2e-86 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)